ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl13b09 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_450769.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3772 Score = 283 bits (143), Expect = 2e-73 Identities = 304/355 (85%), Gaps = 2/355 (0%) Strand = Plus / Plus Query: 61 gctgcggctccc-tgcctcgcgcgccgtcgtcaggaaaatgtcgtcaagtactgatggag 119 |||||||||||| ||||| ||||||| |||||||||||||||||||| | ||||||||| Sbjct: 97 gctgcggctcccctgcct-gcgcgccaccgtcaggaaaatgtcgtcaaatcctgatggag 155 Query: 120 ccaagagtcatgcacgtagagaccttttgctcaagatccaatcagaagctcaaacatgtt 179 || ||| ||| || ||||| | || ||||| ||||||||||| | ||| | | | Sbjct: 156 gcagaagttttgctcggagagatcaattactcaatatccaatcagatgttcacaagttat 215 Query: 180 gggaggggagcaaggtttttgaggctgaacctggcaatggacttcctggccctggtgaaa 239 |||||| | ||||||||||||||||||||||||| | | | || |||||||| |||| Sbjct: 216 gggaggagggcaaggtttttgaggctgaacctgggagtaagccaccaggccctggggaaa 275 Query: 240 aattctttggcaattttccgtacccttacatgaatggacttctacatttggggcgtgcct 299 ||||||||||||||||||| |||||||||||||| || | ||||||||||| | ||||| Sbjct: 276 aattctttggcaattttccatacccttacatgaacggcttgctacatttgggccatgcct 335 Query: 300 tctcattgtccaagcttgaatttggtgctgcataccacagactccgtggctcaaatgtcc 359 ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| Sbjct: 336 tctcattgtccaagcttgagtttggtgctgcataccatagactccgtggctcaaatgtcc 395 Query: 360 ttttgccgtttggttttcattgtactgggatgcccatcaaggcctcagctgataa 414 ||||||| |||| ||| |||||||| || |||||||||||||||||||| ||||| Sbjct: 396 ttttgccttttgctttccattgtacgggaatgcccatcaaggcctcagcagataa 450
>dbj|AK068860.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013169D12, full insert sequence Length = 3772 Score = 283 bits (143), Expect = 2e-73 Identities = 304/355 (85%), Gaps = 2/355 (0%) Strand = Plus / Plus Query: 61 gctgcggctccc-tgcctcgcgcgccgtcgtcaggaaaatgtcgtcaagtactgatggag 119 |||||||||||| ||||| ||||||| |||||||||||||||||||| | ||||||||| Sbjct: 97 gctgcggctcccctgcct-gcgcgccaccgtcaggaaaatgtcgtcaaatcctgatggag 155 Query: 120 ccaagagtcatgcacgtagagaccttttgctcaagatccaatcagaagctcaaacatgtt 179 || ||| ||| || ||||| | || ||||| ||||||||||| | ||| | | | Sbjct: 156 gcagaagttttgctcggagagatcaattactcaatatccaatcagatgttcacaagttat 215 Query: 180 gggaggggagcaaggtttttgaggctgaacctggcaatggacttcctggccctggtgaaa 239 |||||| | ||||||||||||||||||||||||| | | | || |||||||| |||| Sbjct: 216 gggaggagggcaaggtttttgaggctgaacctgggagtaagccaccaggccctggggaaa 275 Query: 240 aattctttggcaattttccgtacccttacatgaatggacttctacatttggggcgtgcct 299 ||||||||||||||||||| |||||||||||||| || | ||||||||||| | ||||| Sbjct: 276 aattctttggcaattttccatacccttacatgaacggcttgctacatttgggccatgcct 335 Query: 300 tctcattgtccaagcttgaatttggtgctgcataccacagactccgtggctcaaatgtcc 359 ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| Sbjct: 336 tctcattgtccaagcttgagtttggtgctgcataccatagactccgtggctcaaatgtcc 395 Query: 360 ttttgccgtttggttttcattgtactgggatgcccatcaaggcctcagctgataa 414 ||||||| |||| ||| |||||||| || |||||||||||||||||||| ||||| Sbjct: 396 ttttgccttttgctttccattgtacgggaatgcccatcaaggcctcagcagataa 450
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 272 bits (137), Expect = 9e-70 Identities = 278/325 (85%) Strand = Plus / Minus Query: 90 tcaggaaaatgtcgtcaagtactgatggagccaagagtcatgcacgtagagaccttttgc 149 |||||||||||||||||| | ||||||||| || ||| ||| || ||||| | || | Sbjct: 12680674 tcaggaaaatgtcgtcaaatcctgatggaggcagaagttttgctcggagagatcaattac 12680615 Query: 150 tcaagatccaatcagaagctcaaacatgttgggaggggagcaaggtttttgaggctgaac 209 |||| ||||||||||| | ||| | | ||||||| | ||||||||||||||||||||| Sbjct: 12680614 tcaatatccaatcagatgttcacaagttatgggaggagggcaaggtttttgaggctgaac 12680555 Query: 210 ctggcaatggacttcctggccctggtgaaaaattctttggcaattttccgtacccttaca 269 |||| | | | || |||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 12680554 ctgggagtaagccaccaggccctggggaaaaattctttggcaattttccatacccttaca 12680495 Query: 270 tgaatggacttctacatttggggcgtgccttctcattgtccaagcttgaatttggtgctg 329 |||| || | ||||||||||| | |||||||||||||||||||||||| |||||||||| Sbjct: 12680494 tgaacggcttgctacatttgggccatgccttctcattgtccaagcttgagtttggtgctg 12680435 Query: 330 cataccacagactccgtggctcaaatgtccttttgccgtttggttttcattgtactggga 389 ||||||| ||||||||||||||||||||||||||||| |||| ||| |||||||| || | Sbjct: 12680434 cataccatagactccgtggctcaaatgtccttttgccttttgctttccattgtacgggaa 12680375 Query: 390 tgcccatcaaggcctcagctgataa 414 ||||||||||||||||||| ||||| Sbjct: 12680374 tgcccatcaaggcctcagcagataa 12680350 Score = 236 bits (119), Expect = 5e-59 Identities = 272/323 (84%) Strand = Plus / Plus Query: 92 aggaaaatgtcgtcaagtactgatggagccaagagtcatgcacgtagagaccttttgctc 151 ||||||||||| |||| | ||||||||| || ||| ||| || ||||| |||| ||| Sbjct: 19181329 aggaaaatgtcatcaaatcctgatggaggcagaagttttgctcggagagatattttactc 19181388 Query: 152 aagatccaatcagaagctcaaacatgttgggaggggagcaaggtttttgaggctgaacct 211 |||||||| ||||| ||||||| ||| ||||||| ||||||||||||||||||||||||| Sbjct: 19181389 aagatccagtcagatgctcaaaaatggtgggaggagagcaaggtttttgaggctgaacct 19181448 Query: 212 ggcaatggacttcctggccctggtgaaaaattctttggcaattttccgtacccttacatg 271 || ||| || ||| |||||||| ||||| ||||||||||| ||||| || ||||||||| Sbjct: 19181449 gggaataaacctccgggccctggggaaaagttctttggcaactttccatatccttacatg 19181508 Query: 272 aatggacttctacatttggggcgtgccttctcattgtccaagcttgaatttggtgctgca 331 ||||| | ||||||||||| | ||| ||||| ||||| || ||||| |||||||||||| Sbjct: 19181509 aatggcttgctacatttgggccatgcgttctccttgtctaaacttgagtttggtgctgca 19181568 Query: 332 taccacagactccgtggctcaaatgtccttttgccgtttggttttcattgtactgggatg 391 || || || || ||||| |||||||| |||||||| |||| ||| || ||||| || ||| Sbjct: 19181569 tatcagaggcttcgtggttcaaatgttcttttgccatttgctttccactgtacgggaatg 19181628 Query: 392 cccatcaaggcctcagctgataa 414 ||||||||||||||||| ||||| Sbjct: 19181629 cccatcaaggcctcagcagataa 19181651 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 tccgtcgccgtcgccgtcgc 21 |||||||||||||||||||| Sbjct: 18321173 tccgtcgccgtcgccgtcgc 18321192 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 ccgtcgccgtcgccgtcgct 22 |||||||||||||||||||| Sbjct: 5704752 ccgtcgccgtcgccgtcgct 5704733 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 ccgtcgccgtcgccgtcgct 22 |||||||||||||||||||| Sbjct: 3130181 ccgtcgccgtcgccgtcgct 3130162
>dbj|AP005838.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0041C07 Length = 179047 Score = 272 bits (137), Expect = 9e-70 Identities = 278/325 (85%) Strand = Plus / Minus Query: 90 tcaggaaaatgtcgtcaagtactgatggagccaagagtcatgcacgtagagaccttttgc 149 |||||||||||||||||| | ||||||||| || ||| ||| || ||||| | || | Sbjct: 146612 tcaggaaaatgtcgtcaaatcctgatggaggcagaagttttgctcggagagatcaattac 146553 Query: 150 tcaagatccaatcagaagctcaaacatgttgggaggggagcaaggtttttgaggctgaac 209 |||| ||||||||||| | ||| | | ||||||| | ||||||||||||||||||||| Sbjct: 146552 tcaatatccaatcagatgttcacaagttatgggaggagggcaaggtttttgaggctgaac 146493 Query: 210 ctggcaatggacttcctggccctggtgaaaaattctttggcaattttccgtacccttaca 269 |||| | | | || |||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 146492 ctgggagtaagccaccaggccctggggaaaaattctttggcaattttccatacccttaca 146433 Query: 270 tgaatggacttctacatttggggcgtgccttctcattgtccaagcttgaatttggtgctg 329 |||| || | ||||||||||| | |||||||||||||||||||||||| |||||||||| Sbjct: 146432 tgaacggcttgctacatttgggccatgccttctcattgtccaagcttgagtttggtgctg 146373 Query: 330 cataccacagactccgtggctcaaatgtccttttgccgtttggttttcattgtactggga 389 ||||||| ||||||||||||||||||||||||||||| |||| ||| |||||||| || | Sbjct: 146372 cataccatagactccgtggctcaaatgtccttttgccttttgctttccattgtacgggaa 146313 Query: 390 tgcccatcaaggcctcagctgataa 414 ||||||||||||||||||| ||||| Sbjct: 146312 tgcccatcaaggcctcagcagataa 146288
>dbj|AK099796.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013097H06, full insert sequence Length = 3673 Score = 256 bits (129), Expect = 5e-65 Identities = 282/333 (84%) Strand = Plus / Plus Query: 82 cgccgtcgtcaggaaaatgtcgtcaagtactgatggagccaagagtcatgcacgtagaga 141 ||||||||||||||||||||| |||| | ||||||||| || ||| ||| || ||||| Sbjct: 124 cgccgtcgtcaggaaaatgtcatcaaatcctgatggaggcagaagttttgctcggagaga 183 Query: 142 ccttttgctcaagatccaatcagaagctcaaacatgttgggaggggagcaaggtttttga 201 |||| ||||||||||| ||||| ||||||| ||| ||||||| ||||||||||||||| Sbjct: 184 tattttactcaagatccagtcagatgctcaaaaatggtgggaggagagcaaggtttttga 243 Query: 202 ggctgaacctggcaatggacttcctggccctggtgaaaaattctttggcaattttccgta 261 |||||||||||| ||| || ||| |||||||| ||||| ||||||||||| ||||| || Sbjct: 244 ggctgaacctgggaataaacctccgggccctggggaaaagttctttggcaactttccata 303 Query: 262 cccttacatgaatggacttctacatttggggcgtgccttctcattgtccaagcttgaatt 321 |||||||||||||| | ||||||||||| | ||| ||||| ||||| || ||||| || Sbjct: 304 tccttacatgaatggcttgctacatttgggccatgcgttctccttgtctaaacttgagtt 363 Query: 322 tggtgctgcataccacagactccgtggctcaaatgtccttttgccgtttggttttcattg 381 |||||||||||| || || || ||||| |||||||| |||||||| |||| ||| || || Sbjct: 364 tggtgctgcatatcagaggcttcgtggttcaaatgttcttttgccatttgctttccactg 423 Query: 382 tactgggatgcccatcaaggcctcagctgataa 414 ||| || |||||||||||||||||||| ||||| Sbjct: 424 tacgggaatgcccatcaaggcctcagcagataa 456
>dbj|AK100624.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023108I24, full insert sequence Length = 3669 Score = 256 bits (129), Expect = 5e-65 Identities = 282/333 (84%) Strand = Plus / Plus Query: 82 cgccgtcgtcaggaaaatgtcgtcaagtactgatggagccaagagtcatgcacgtagaga 141 ||||||||||||||||||||| |||| | ||||||||| || ||| ||| || ||||| Sbjct: 124 cgccgtcgtcaggaaaatgtcatcaaatcctgatggaggcagaagttttgctcggagaga 183 Query: 142 ccttttgctcaagatccaatcagaagctcaaacatgttgggaggggagcaaggtttttga 201 |||| ||||||||||| ||||| ||||||| ||| ||||||| ||||||||||||||| Sbjct: 184 tattttactcaagatccagtcagatgctcaaaaatggtgggaggagagcaaggtttttga 243 Query: 202 ggctgaacctggcaatggacttcctggccctggtgaaaaattctttggcaattttccgta 261 |||||||||||| ||| || ||| |||||||| ||||| ||||||||||| ||||| || Sbjct: 244 ggctgaacctgggaataaacctccgggccctggggaaaagttctttggcaactttccata 303 Query: 262 cccttacatgaatggacttctacatttggggcgtgccttctcattgtccaagcttgaatt 321 |||||||||||||| | ||||||||||| | ||| ||||| ||||| || ||||| || Sbjct: 304 tccttacatgaatggcttgctacatttgggccatgcgttctccttgtctaaacttgagtt 363 Query: 322 tggtgctgcataccacagactccgtggctcaaatgtccttttgccgtttggttttcattg 381 |||||||||||| || || || ||||| |||||||| |||||||| |||| ||| || || Sbjct: 364 tggtgctgcatatcagaggcttcgtggttcaaatgttcttttgccatttgctttccactg 423 Query: 382 tactgggatgcccatcaaggcctcagctgataa 414 ||| || |||||||||||||||||||| ||||| Sbjct: 424 tacgggaatgcccatcaaggcctcagcagataa 456
>gb|AC108763.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBb0004A05, complete sequence Length = 157913 Score = 236 bits (119), Expect = 5e-59 Identities = 272/323 (84%) Strand = Plus / Plus Query: 92 aggaaaatgtcgtcaagtactgatggagccaagagtcatgcacgtagagaccttttgctc 151 ||||||||||| |||| | ||||||||| || ||| ||| || ||||| |||| ||| Sbjct: 112260 aggaaaatgtcatcaaatcctgatggaggcagaagttttgctcggagagatattttactc 112319 Query: 152 aagatccaatcagaagctcaaacatgttgggaggggagcaaggtttttgaggctgaacct 211 |||||||| ||||| ||||||| ||| ||||||| ||||||||||||||||||||||||| Sbjct: 112320 aagatccagtcagatgctcaaaaatggtgggaggagagcaaggtttttgaggctgaacct 112379 Query: 212 ggcaatggacttcctggccctggtgaaaaattctttggcaattttccgtacccttacatg 271 || ||| || ||| |||||||| ||||| ||||||||||| ||||| || ||||||||| Sbjct: 112380 gggaataaacctccgggccctggggaaaagttctttggcaactttccatatccttacatg 112439 Query: 272 aatggacttctacatttggggcgtgccttctcattgtccaagcttgaatttggtgctgca 331 ||||| | ||||||||||| | ||| ||||| ||||| || ||||| |||||||||||| Sbjct: 112440 aatggcttgctacatttgggccatgcgttctccttgtctaaacttgagtttggtgctgca 112499 Query: 332 taccacagactccgtggctcaaatgtccttttgccgtttggttttcattgtactgggatg 391 || || || || ||||| |||||||| |||||||| |||| ||| || ||||| || ||| Sbjct: 112500 tatcagaggcttcgtggttcaaatgttcttttgccatttgctttccactgtacgggaatg 112559 Query: 392 cccatcaaggcctcagctgataa 414 ||||||||||||||||| ||||| Sbjct: 112560 cccatcaaggcctcagcagataa 112582
>gb|AC105259.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1115_B04, complete sequence Length = 95383 Score = 167 bits (84), Expect = 4e-38 Identities = 231/280 (82%) Strand = Plus / Plus Query: 140 gaccttttgctcaagatccaatcagaagctcaaacatgttgggaggggagcaaggttttt 199 ||||||||||| ||||||||||| |||| |||| ||||||||| | || ||||||||| Sbjct: 70421 gaccttttgcttaagatccaatctgaagtgcaaaaatgttgggaagagaacaaggttttc 70480 Query: 200 gaggctgaacctggcaatggacttcctggccctggtgaaaaattctttggcaattttccg 259 || || | |||| || || ||| |||||||||||||||||||||| ||||| | Sbjct: 70481 gaagcaaaggctggtgatacacctccaagccctggtgaaaaattctttgggaatttcaca 70540 Query: 260 tacccttacatgaatggacttctacatttggggcgtgccttctcattgtccaagcttgaa 319 ||||| ||||||||||| | |||||||| || | ||||||| || | || |||||||| Sbjct: 70541 tacccatacatgaatggcatgctacatttaggccatgccttcacactatcgaagcttgag 70600 Query: 320 tttggtgctgcataccacagactccgtggctcaaatgtccttttgccgtttggttttcat 379 |||| ||| |||||||||||||||| |||||||||||||||||| || |||| ||| || Sbjct: 70601 tttgctgcagcataccacagactccatggctcaaatgtccttttaccctttgctttccac 70660 Query: 380 tgtactgggatgcccatcaaggcctcagctgataagcttg 419 |||||||| ||||| |||||| | |||||||||||||||| Sbjct: 70661 tgtactggaatgccaatcaagccatcagctgataagcttg 70700
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 167 bits (84), Expect = 4e-38 Identities = 231/280 (82%) Strand = Plus / Plus Query: 140 gaccttttgctcaagatccaatcagaagctcaaacatgttgggaggggagcaaggttttt 199 ||||||||||| ||||||||||| |||| |||| ||||||||| | || ||||||||| Sbjct: 8492151 gaccttttgcttaagatccaatctgaagtgcaaaaatgttgggaagagaacaaggttttc 8492210 Query: 200 gaggctgaacctggcaatggacttcctggccctggtgaaaaattctttggcaattttccg 259 || || | |||| || || ||| |||||||||||||||||||||| ||||| | Sbjct: 8492211 gaagcaaaggctggtgatacacctccaagccctggtgaaaaattctttgggaatttcaca 8492270 Query: 260 tacccttacatgaatggacttctacatttggggcgtgccttctcattgtccaagcttgaa 319 ||||| ||||||||||| | |||||||| || | ||||||| || | || |||||||| Sbjct: 8492271 tacccatacatgaatggcatgctacatttaggccatgccttcacactatcgaagcttgag 8492330 Query: 320 tttggtgctgcataccacagactccgtggctcaaatgtccttttgccgtttggttttcat 379 |||| ||| |||||||||||||||| |||||||||||||||||| || |||| ||| || Sbjct: 8492331 tttgctgcagcataccacagactccatggctcaaatgtccttttaccctttgctttccac 8492390 Query: 380 tgtactgggatgcccatcaaggcctcagctgataagcttg 419 |||||||| ||||| |||||| | |||||||||||||||| Sbjct: 8492391 tgtactggaatgccaatcaagccatcagctgataagcttg 8492430 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 ccgtcgccgtcgccgtcgct 22 |||||||||||||||||||| Sbjct: 6426285 ccgtcgccgtcgccgtcgct 6426266
>dbj|AK120403.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013088K21, full insert sequence Length = 5000 Score = 167 bits (84), Expect = 4e-38 Identities = 231/280 (82%) Strand = Plus / Plus Query: 140 gaccttttgctcaagatccaatcagaagctcaaacatgttgggaggggagcaaggttttt 199 ||||||||||| ||||||||||| |||| |||| ||||||||| | || ||||||||| Sbjct: 499 gaccttttgcttaagatccaatctgaagtgcaaaaatgttgggaagagaacaaggttttc 558 Query: 200 gaggctgaacctggcaatggacttcctggccctggtgaaaaattctttggcaattttccg 259 || || | |||| || || ||| |||||||||||||||||||||| ||||| | Sbjct: 559 gaagcaaaggctggtgatacacctccaagccctggtgaaaaattctttgggaatttcaca 618 Query: 260 tacccttacatgaatggacttctacatttggggcgtgccttctcattgtccaagcttgaa 319 ||||| ||||||||||| | |||||||| || | ||||||| || | || |||||||| Sbjct: 619 tacccatacatgaatggcatgctacatttaggccatgccttcacactatcgaagcttgag 678 Query: 320 tttggtgctgcataccacagactccgtggctcaaatgtccttttgccgtttggttttcat 379 |||| ||| |||||||||||||||| |||||||||||||||||| || |||| ||| || Sbjct: 679 tttgctgcagcataccacagactccatggctcaaatgtccttttaccctttgctttccac 738 Query: 380 tgtactgggatgcccatcaaggcctcagctgataagcttg 419 |||||||| ||||| |||||| | |||||||||||||||| Sbjct: 739 tgtactggaatgccaatcaagccatcagctgataagcttg 778
>dbj|AK065584.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013033A03, full insert sequence Length = 1769 Score = 167 bits (84), Expect = 4e-38 Identities = 231/280 (82%) Strand = Plus / Plus Query: 140 gaccttttgctcaagatccaatcagaagctcaaacatgttgggaggggagcaaggttttt 199 ||||||||||| ||||||||||| |||| |||| ||||||||| | || ||||||||| Sbjct: 403 gaccttttgcttaagatccaatctgaagtgcaaaaatgttgggaagagaacaaggttttc 462 Query: 200 gaggctgaacctggcaatggacttcctggccctggtgaaaaattctttggcaattttccg 259 || || | |||| || || ||| |||||||||||||||||||||| ||||| | Sbjct: 463 gaagcaaaggctggtgatacacctccaagccctggtgaaaaattctttgggaatttcaca 522 Query: 260 tacccttacatgaatggacttctacatttggggcgtgccttctcattgtccaagcttgaa 319 ||||| ||||||||||| | |||||||| || | ||||||| || | || |||||||| Sbjct: 523 tacccatacatgaatggcatgctacatttaggccatgccttcacactatcgaagcttgag 582 Query: 320 tttggtgctgcataccacagactccgtggctcaaatgtccttttgccgtttggttttcat 379 |||| ||| |||||||||||||||| |||||||||||||||||| || |||| ||| || Sbjct: 583 tttgctgcagcataccacagactccatggctcaaatgtccttttaccctttgctttccac 642 Query: 380 tgtactgggatgcccatcaaggcctcagctgataagcttg 419 |||||||| ||||| |||||| | |||||||||||||||| Sbjct: 643 tgtactggaatgccaatcaagccatcagctgataagcttg 682
>ref|NM_100834.3| Arabidopsis thaliana ATP binding / leucine-tRNA ligase/ tRNA ligase AT1G09620 mRNA, complete cds Length = 4269 Score = 50.1 bits (25), Expect = 0.006 Identities = 103/129 (79%) Strand = Plus / Plus Query: 290 gggcgtgccttctcattgtccaagcttgaatttggtgctgcataccacagactccgtggc 349 |||| |||||| |||||||||||| |||| |||| | |||| ||||| || || | || Sbjct: 328 gggcatgccttttcattgtccaaggttgattttgcttctgcttaccataggctaagagga 387 Query: 350 tcaaatgtccttttgccgtttggttttcattgtactgggatgcccatcaaggcctcagct 409 | ||||| ||| | || |||||||| ||||||||||| ||||| || ||||| || || Sbjct: 388 gctaatgtgcttcttccatttggtttccattgtactggtatgccaattaaggcttctgcg 447 Query: 410 gataagctt 418 ||||||||| Sbjct: 448 gataagctt 456
>gb|AY056261.1| Arabidopsis thaliana At1g09620 mRNA sequence Length = 3645 Score = 50.1 bits (25), Expect = 0.006 Identities = 103/129 (79%) Strand = Plus / Plus Query: 290 gggcgtgccttctcattgtccaagcttgaatttggtgctgcataccacagactccgtggc 349 |||| |||||| |||||||||||| |||| |||| | |||| ||||| || || | || Sbjct: 314 gggcatgccttttcattgtccaaggttgattttgcttctgcttaccataggctaagagga 373 Query: 350 tcaaatgtccttttgccgtttggttttcattgtactgggatgcccatcaaggcctcagct 409 | ||||| ||| | || |||||||| ||||||||||| ||||| || ||||| || || Sbjct: 374 gctaatgtgcttcttccatttggtttccattgtactggtatgccaattaaggcttctgcg 433 Query: 410 gataagctt 418 ||||||||| Sbjct: 434 gataagctt 442
>gb|AC000132.1|F21M12 Sequence of BAC F21M12 from Arabidopsis thaliana chromosome 1, complete sequence Length = 146505 Score = 50.1 bits (25), Expect = 0.006 Identities = 103/129 (79%) Strand = Plus / Minus Query: 290 gggcgtgccttctcattgtccaagcttgaatttggtgctgcataccacagactccgtggc 349 |||| |||||| |||||||||||| |||| |||| | |||| ||||| || || | || Sbjct: 3158 gggcatgccttttcattgtccaaggttgattttgcttctgcttaccataggctaagagga 3099 Query: 350 tcaaatgtccttttgccgtttggttttcattgtactgggatgcccatcaaggcctcagct 409 | ||||| ||| | || |||||||| ||||||||||| ||||| || ||||| || || Sbjct: 3098 gctaatgtgcttcttccatttggtttccattgtactggtatgccaattaaggcttctgcg 3039 Query: 410 gataagctt 418 ||||||||| Sbjct: 3038 gataagctt 3030
>ref|XM_606600.2| PREDICTED: Bos taurus similar to nuclear receptor subfamily 2, group F, member 6, transcript variant 1 (LOC528188), mRNA Length = 2026 Score = 46.1 bits (23), Expect = 0.091 Identities = 29/31 (93%) Strand = Plus / Plus Query: 58 gctgctgcggctccctgcctcgcgcgccgtc 88 |||||||||||||||||||| ||| |||||| Sbjct: 1411 gctgctgcggctccctgccttgcgtgccgtc 1441
>ref|XM_880610.1| PREDICTED: Bos taurus similar to nuclear receptor subfamily 2, group F, member 6, transcript variant 5 (LOC528188), mRNA Length = 2032 Score = 46.1 bits (23), Expect = 0.091 Identities = 29/31 (93%) Strand = Plus / Plus Query: 58 gctgctgcggctccctgcctcgcgcgccgtc 88 |||||||||||||||||||| ||| |||||| Sbjct: 1417 gctgctgcggctccctgccttgcgtgccgtc 1447
>ref|XM_880589.1| PREDICTED: Bos taurus similar to nuclear receptor subfamily 2, group F, member 6, transcript variant 4 (LOC528188), mRNA Length = 2032 Score = 46.1 bits (23), Expect = 0.091 Identities = 29/31 (93%) Strand = Plus / Plus Query: 58 gctgctgcggctccctgcctcgcgcgccgtc 88 |||||||||||||||||||| ||| |||||| Sbjct: 1417 gctgctgcggctccctgccttgcgtgccgtc 1447
>ref|XM_880568.1| PREDICTED: Bos taurus similar to nuclear receptor subfamily 2, group F, member 6, transcript variant 3 (LOC528188), mRNA Length = 2035 Score = 46.1 bits (23), Expect = 0.091 Identities = 29/31 (93%) Strand = Plus / Plus Query: 58 gctgctgcggctccctgcctcgcgcgccgtc 88 |||||||||||||||||||| ||| |||||| Sbjct: 1420 gctgctgcggctccctgccttgcgtgccgtc 1450
>ref|XM_880549.1| PREDICTED: Bos taurus similar to nuclear receptor subfamily 2, group F, member 6, transcript variant 2 (LOC528188), mRNA Length = 2032 Score = 46.1 bits (23), Expect = 0.091 Identities = 29/31 (93%) Strand = Plus / Plus Query: 58 gctgctgcggctccctgcctcgcgcgccgtc 88 |||||||||||||||||||| ||| |||||| Sbjct: 1417 gctgctgcggctccctgccttgcgtgccgtc 1447
>dbj|AP003605.1| Nostoc sp. PCC 7120 plasmid pCC7120epsilon DNA, complete sequence Length = 40340 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 3 ccgtcgccgtcgccgtcgcttt 24 |||||||||||||||||||||| Sbjct: 15302 ccgtcgccgtcgccgtcgcttt 15323
>ref|XM_483173.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1364 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 ccgtcgccgtcgccgtcgctt 23 ||||||||||||||||||||| Sbjct: 1216 ccgtcgccgtcgccgtcgctt 1196
>ref|NM_194984.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0089D15.3), mRNA Length = 1332 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 ctccgtcgccgtcgccgtcgc 21 ||||||||||||||||||||| Sbjct: 934 ctccgtcgccgtcgccgtcgc 914
>ref|NM_196666.1| Oryza sativa (japonica cultivar-group) putative potassium-dependent sodium-calcium exchanger (OSJNBb0040I11.2), mRNA Length = 1827 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 ctccgtcgccgtcgccgtcgc 21 ||||||||||||||||||||| Sbjct: 991 ctccgtcgccgtcgccgtcgc 971
>ref|NM_189774.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 657 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 ctccgtcgccgtcgccgtcgc 21 ||||||||||||||||||||| Sbjct: 504 ctccgtcgccgtcgccgtcgc 484
>gb|AC099308.2| Drosophila melanogaster clone BACR11M14, complete sequence Length = 173097 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 3 ccgtcgccgtcgccgtcgcttttct 27 ||||||||||||||||||| ||||| Sbjct: 127953 ccgtcgccgtcgccgtcgcctttct 127977
>gb|AY661659.1| Sorghum bicolor clone BAC 75D9, complete sequence Length = 204120 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 ctccgtcgccgtcgccgtcgc 21 ||||||||||||||||||||| Sbjct: 25866 ctccgtcgccgtcgccgtcgc 25886
>emb|AL590556.20| Human DNA sequence from clone RP11-26H16 on chromosome 1 Contains a ribosomal protein L21 (RPL21) pseudogene, the 5' end of the HSPG2 gene for heparan sulfate proteoglycan 2 (perlecan), the ELA3B gene for elastase 3B (pancreatic) and the ELA3A gene for elastase 3A (pancreatic (protease E)), complete sequence Length = 118495 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 175 atgttgggaggggagcaaggt 195 ||||||||||||||||||||| Sbjct: 25892 atgttgggaggggagcaaggt 25872
>tpg|BK003235.1| TPA: TPA_inf: Drosophila melanogaster HDC19904 (HDC19904) gene, complete cds Length = 941 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 3 ccgtcgccgtcgccgtcgcttttct 27 ||||||||||||||||||| ||||| Sbjct: 773 ccgtcgccgtcgccgtcgcctttct 749
>gb|AC078944.5|AC078944 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0089D15, from Chromosome 10, complete sequence Length = 164679 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 ctccgtcgccgtcgccgtcgc 21 ||||||||||||||||||||| Sbjct: 6111 ctccgtcgccgtcgccgtcgc 6131
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 ctccgtcgccgtcgccgtcgc 21 ||||||||||||||||||||| Sbjct: 15101039 ctccgtcgccgtcgccgtcgc 15101019 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 ctccgtcgccgtcgccgtcgc 21 ||||||||||||||||||||| Sbjct: 4009282 ctccgtcgccgtcgccgtcgc 4009302 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 ccgtcgccgtcgccgtcgct 22 |||||||||||||||||||| Sbjct: 20141207 ccgtcgccgtcgccgtcgct 20141188
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 ccgtcgccgtcgccgtcgctt 23 ||||||||||||||||||||| Sbjct: 24614286 ccgtcgccgtcgccgtcgctt 24614306 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 tccgtcgccgtcgccgtcgc 21 |||||||||||||||||||| Sbjct: 26338393 tccgtcgccgtcgccgtcgc 26338374 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 tccgtcgccgtcgccgtcgc 21 |||||||||||||||||||| Sbjct: 22166174 tccgtcgccgtcgccgtcgc 22166155
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 ctccgtcgccgtcgccgtcgc 21 ||||||||||||||||||||| Sbjct: 27498440 ctccgtcgccgtcgccgtcgc 27498460
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 ctccgtcgccgtcgccgtcgc 21 ||||||||||||||||||||| Sbjct: 6172910 ctccgtcgccgtcgccgtcgc 6172930
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 ctccgtcgccgtcgccgtcgc 21 ||||||||||||||||||||| Sbjct: 41964951 ctccgtcgccgtcgccgtcgc 41964931 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 ctccgtcgccgtcgccgtcgc 21 ||||||||||||||||||||| Sbjct: 10058927 ctccgtcgccgtcgccgtcgc 10058947 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 tccgtcgccgtcgccgtcgc 21 |||||||||||||||||||| Sbjct: 32133362 tccgtcgccgtcgccgtcgc 32133381
>gb|AC087547.2|AC087547 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbeb0040I11, complete sequence Length = 129420 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 ctccgtcgccgtcgccgtcgc 21 ||||||||||||||||||||| Sbjct: 9652 ctccgtcgccgtcgccgtcgc 9632
>gb|AC074264.3| Homo sapiens BAC clone RP11-410L9 from 2, complete sequence Length = 122472 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 53 ctgaggctgctgcggctccctgcct 77 ||||||||||| ||||||||||||| Sbjct: 6156 ctgaggctgctacggctccctgcct 6180
>dbj|AP003683.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0431G06 Length = 140466 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 ctccgtcgccgtcgccgtcgc 21 ||||||||||||||||||||| Sbjct: 67028 ctccgtcgccgtcgccgtcgc 67008
>dbj|AP003631.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0581F09 Length = 154248 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 ctccgtcgccgtcgccgtcgc 21 ||||||||||||||||||||| Sbjct: 6396 ctccgtcgccgtcgccgtcgc 6416
>dbj|AP005610.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0032M14 Length = 146636 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 ctccgtcgccgtcgccgtcgc 21 ||||||||||||||||||||| Sbjct: 67998 ctccgtcgccgtcgccgtcgc 68018
>dbj|AP005192.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0485A07 Length = 166397 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 ctccgtcgccgtcgccgtcgc 21 ||||||||||||||||||||| Sbjct: 117509 ctccgtcgccgtcgccgtcgc 117529
>dbj|AP000364.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0026F07 Length = 137354 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 ccgtcgccgtcgccgtcgctt 23 ||||||||||||||||||||| Sbjct: 122546 ccgtcgccgtcgccgtcgctt 122566
>dbj|AP003977.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1006_A02 Length = 175153 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 ctccgtcgccgtcgccgtcgc 21 ||||||||||||||||||||| Sbjct: 138392 ctccgtcgccgtcgccgtcgc 138412
>dbj|AK104991.2| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-E02, full insert sequence Length = 1016 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 ctccgtcgccgtcgccgtcgc 21 ||||||||||||||||||||| Sbjct: 589 ctccgtcgccgtcgccgtcgc 569
>gb|AC158405.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone B1366F05, complete sequence Length = 171022 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 ctccgtcgccgtcgccgtcgc 21 ||||||||||||||||||||| Sbjct: 55572 ctccgtcgccgtcgccgtcgc 55552
>dbj|AK108392.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-142-F06, full insert sequence Length = 772 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 ctccgtcgccgtcgccgtcgc 21 ||||||||||||||||||||| Sbjct: 85 ctccgtcgccgtcgccgtcgc 105
>dbj|AK107539.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-H07, full insert sequence Length = 1363 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 ccgtcgccgtcgccgtcgctt 23 ||||||||||||||||||||| Sbjct: 1215 ccgtcgccgtcgccgtcgctt 1195
>dbj|AK100938.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023138B21, full insert sequence Length = 1896 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 ctccgtcgccgtcgccgtcgc 21 ||||||||||||||||||||| Sbjct: 999 ctccgtcgccgtcgccgtcgc 979
>dbj|AK073385.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033041D19, full insert sequence Length = 2378 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 ctccgtcgccgtcgccgtcgc 21 ||||||||||||||||||||| Sbjct: 1232 ctccgtcgccgtcgccgtcgc 1252
>dbj|AK069958.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023035P08, full insert sequence Length = 1013 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 ctccgtcgccgtcgccgtcgc 21 ||||||||||||||||||||| Sbjct: 589 ctccgtcgccgtcgccgtcgc 569
>gb|AE003570.4| Drosophila melanogaster chromosome X, section 69 of 74 of the complete sequence Length = 300051 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 3 ccgtcgccgtcgccgtcgcttttct 27 ||||||||||||||||||| ||||| Sbjct: 284742 ccgtcgccgtcgccgtcgcctttct 284718
>gb|U77484.1|RNGZAL3 Rattus norvegicus guanine nucleotide-binding protein (Gz-alpha) gene, exon 2 Length = 1211 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 56 aggctgctgcggctccctgcctcgc 80 |||||||| |||||||||||||||| Sbjct: 39 aggctgctccggctccctgcctcgc 15
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 ctccgtcgccgtcgccgtcgc 21 ||||||||||||||||||||| Sbjct: 15109280 ctccgtcgccgtcgccgtcgc 15109260 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 ctccgtcgccgtcgccgtcgc 21 ||||||||||||||||||||| Sbjct: 4010103 ctccgtcgccgtcgccgtcgc 4010123 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 ccgtcgccgtcgccgtcgct 22 |||||||||||||||||||| Sbjct: 20152483 ccgtcgccgtcgccgtcgct 20152464
>ref|NM_013189.1| Rattus norvegicus guanine nucleotide binding protein, alpha z subunit (Gnaz), mRNA Length = 3350 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 56 aggctgctgcggctccctgcctcgc 80 |||||||| |||||||||||||||| Sbjct: 227 aggctgctccggctccctgcctcgc 203
>gb|AC117590.14| Mus musculus chromosome 3, clone RP23-225F12, complete sequence Length = 180451 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 ccgtcgccgtcgccgtcgct 22 |||||||||||||||||||| Sbjct: 98450 ccgtcgccgtcgccgtcgct 98469
>gb|BC018600.1| Mus musculus SKI-like, mRNA (cDNA clone IMAGE:3597499) Length = 2924 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 ccgtcgccgtcgccgtcgct 22 |||||||||||||||||||| Sbjct: 24 ccgtcgccgtcgccgtcgct 5
>ref|XM_483460.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1257 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 tccgtcgccgtcgccgtcgc 21 |||||||||||||||||||| Sbjct: 492 tccgtcgccgtcgccgtcgc 511
>ref|XM_470590.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2124 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 ccgtcgccgtcgccgtcgct 22 |||||||||||||||||||| Sbjct: 1928 ccgtcgccgtcgccgtcgct 1909
>ref|XM_469724.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1308 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ctccgtcgccgtcgccgtcg 20 |||||||||||||||||||| Sbjct: 90 ctccgtcgccgtcgccgtcg 109
>ref|XM_478644.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1988 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 ctccgtcgccgtcgccgtcg 20 |||||||||||||||||||| Sbjct: 75 ctccgtcgccgtcgccgtcg 56
>ref|XM_478554.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2253 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 tccgtcgccgtcgccgtcgc 21 |||||||||||||||||||| Sbjct: 150 tccgtcgccgtcgccgtcgc 169
>ref|XM_506393.1| PREDICTED Oryza sativa (japonica cultivar-group), P0696F12.4 mRNA Length = 2383 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 tccgtcgccgtcgccgtcgc 21 |||||||||||||||||||| Sbjct: 280 tccgtcgccgtcgccgtcgc 299
>ref|NM_186423.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1365 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 tccgtcgccgtcgccgtcgc 21 |||||||||||||||||||| Sbjct: 564 tccgtcgccgtcgccgtcgc 545
>gb|AY247648.1| Spirochaeta thermophila strain Z-1203 DNA polymerase I (polA) gene, complete cds Length = 2703 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 217 tggacttcctggccctggtg 236 |||||||||||||||||||| Sbjct: 527 tggacttcctggccctggtg 546
>gb|AY023310.1| Oryza sativa microsatellite MRG5635 containing (GGT)X10, genomic sequence Length = 230 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 tccgtcgccgtcgccgtcgc 21 |||||||||||||||||||| Sbjct: 170 tccgtcgccgtcgccgtcgc 151
>gb|AC127951.4| Rattus norvegicus 18 BAC CH230-150D9 (Children's Hospital Oakland Research Institute) complete sequence Length = 164101 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 377 cattgtactgggatgcccat 396 |||||||||||||||||||| Sbjct: 159649 cattgtactgggatgcccat 159630
>gb|AC135920.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0015G13, complete sequence Length = 143966 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 ccgtcgccgtcgccgtcgct 22 |||||||||||||||||||| Sbjct: 128024 ccgtcgccgtcgccgtcgct 128005
>ref|XM_322361.1| Neurospora crassa OR74A DNA POLYMERASE GAMMA (MITOCHONDRIAL DNA POLYMERASE CATALYTIC SUBUNIT) (NCU00276.1) partial mRNA Length = 4281 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 ccgtcgccgtcgccgtcgct 22 |||||||||||||||||||| Sbjct: 4195 ccgtcgccgtcgccgtcgct 4176
>ref|XM_952654.1| Neurospora crassa OR74A DNA POLYMERASE GAMMA (MITOCHONDRIAL DNA POLYMERASE CATALYTIC SUBUNIT) (NCU00276.1) partial mRNA Length = 4281 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 ccgtcgccgtcgccgtcgct 22 |||||||||||||||||||| Sbjct: 4195 ccgtcgccgtcgccgtcgct 4176
>ref|NM_011386.2| Mus musculus SKI-like (Skil), transcript variant 1, mRNA Length = 6717 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 ccgtcgccgtcgccgtcgct 22 |||||||||||||||||||| Sbjct: 88 ccgtcgccgtcgccgtcgct 69
>ref|NM_001039090.1| Mus musculus SKI-like (Skil), transcript variant 2, mRNA Length = 6579 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 ccgtcgccgtcgccgtcgct 22 |||||||||||||||||||| Sbjct: 88 ccgtcgccgtcgccgtcgct 69
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 ccgtcgccgtcgccgtcgct 22 |||||||||||||||||||| Sbjct: 181948 ccgtcgccgtcgccgtcgct 181967
>ref|XM_653129.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN0617.2), mRNA Length = 978 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 gcctcgcgcgccgtcgtcag 93 |||||||||||||||||||| Sbjct: 248 gcctcgcgcgccgtcgtcag 229
>gb|AC118476.15| Mus musculus chromosome 9, clone RP23-242K3, complete sequence Length = 197683 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 ttgggaggggagcaaggttt 197 |||||||||||||||||||| Sbjct: 61624 ttgggaggggagcaaggttt 61605
>gb|AC136149.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0060B06, complete sequence Length = 162568 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 gtcgccgtcgccgtcgcttt 24 |||||||||||||||||||| Sbjct: 107531 gtcgccgtcgccgtcgcttt 107550
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 ctccgtcgccgtcgccgtcg 20 |||||||||||||||||||| Sbjct: 30412020 ctccgtcgccgtcgccgtcg 30412001 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 ccgtcgccgtcgccgtcgct 22 |||||||||||||||||||| Sbjct: 15551606 ccgtcgccgtcgccgtcgct 15551625 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 ccgtcgccgtcgccgtcgct 22 |||||||||||||||||||| Sbjct: 5611501 ccgtcgccgtcgccgtcgct 5611482
>gb|AY299687.1| Culex tritaeniorhynchus signal transducer and activator of transcription (STAT) mRNA, complete cds Length = 4011 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 ccgtcgccgtcgccgtcgct 22 |||||||||||||||||||| Sbjct: 531 ccgtcgccgtcgccgtcgct 550
>gb|AC096226.12| Rattus norvegicus 18 BAC CH230-26M18 (Children's Hospital Oakland Research Institute) complete sequence Length = 232962 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 377 cattgtactgggatgcccat 396 |||||||||||||||||||| Sbjct: 47210 cattgtactgggatgcccat 47191
>gb|AY500822.1| Hordeum vulgare subsp. vulgare RNA-directed RNA polymerase 2 (RDRP2) mRNA, complete cds Length = 3789 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 tccgtcgccgtcgccgtcgc 21 |||||||||||||||||||| Sbjct: 181 tccgtcgccgtcgccgtcgc 162
>ref|XM_983585.1| PREDICTED: Mus musculus hypothetical protein LOC670851 (LOC670851), mRNA Length = 1470 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 ccgtcgccgtcgccgtcgct 22 |||||||||||||||||||| Sbjct: 315 ccgtcgccgtcgccgtcgct 334
>gb|AC099323.6| Oryza sativa chromosome 3 BAC OSJNBa0065F09 genomic sequence, complete sequence Length = 115079 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 ccgtcgccgtcgccgtcgct 22 |||||||||||||||||||| Sbjct: 51157 ccgtcgccgtcgccgtcgct 51176
>gb|AY333070.1| Drosophila virilis antennapedia (Antp), CG10013 (CG10013), CG31217 (CG31217), and ultrabithorax (Ubx) genes, complete cds Length = 308092 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 ccgtcgccgtcgccgtcgct 22 |||||||||||||||||||| Sbjct: 18610 ccgtcgccgtcgccgtcgct 18629
>ref|XM_500347.1| Yarrowia lipolytica CLIB122, YALI0B00528g predicted mRNA Length = 2781 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 ccgtcgccgtcgccgtcgct 22 |||||||||||||||||||| Sbjct: 101 ccgtcgccgtcgccgtcgct 82
>emb|AL121984.14|HSA277C14 Human DNA sequence from clone RP11-277C14 on chromosome 1 Contains part of the DNM3 gene for dynamin 3, complete sequence Length = 155941 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 atggagccaagagtcatgca 133 |||||||||||||||||||| Sbjct: 151125 atggagccaagagtcatgca 151144
>gb|AC113948.5| Oryza sativa chromosome 10 BAC OSJNBb0038A07 genomic sequence, complete sequence Length = 132900 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 ccgtcgccgtcgccgtcgct 22 |||||||||||||||||||| Sbjct: 25284 ccgtcgccgtcgccgtcgct 25303
>gb|AC087852.11| Oryza sativa chromosome 3 BAC OJ1124_H03 genomic sequence, complete sequence Length = 149380 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ctccgtcgccgtcgccgtcg 20 |||||||||||||||||||| Sbjct: 64995 ctccgtcgccgtcgccgtcg 65014
>gb|AC092389.4| Oryza sativa chromosome 10 BAC OSJNBa0053C23 genomic sequence, complete sequence Length = 194361 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 ccgtcgccgtcgccgtcgct 22 |||||||||||||||||||| Sbjct: 18942 ccgtcgccgtcgccgtcgct 18923
>gb|AC151612.2| Emiliania huxleyi clone JGIACCU-13I1, complete sequence Length = 35427 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 tccgtcgccgtcgccgtcgc 21 |||||||||||||||||||| Sbjct: 13475 tccgtcgccgtcgccgtcgc 13456
>dbj|AK154471.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630037C14 product:SKI-like, full insert sequence Length = 3409 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 ccgtcgccgtcgccgtcgct 22 |||||||||||||||||||| Sbjct: 40 ccgtcgccgtcgccgtcgct 21
>dbj|AK162952.1| Mus musculus adult male spinal cord cDNA, RIKEN full-length enriched library, clone:A330075I20 product:SKI-like, full insert sequence Length = 4790 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 ccgtcgccgtcgccgtcgct 22 |||||||||||||||||||| Sbjct: 89 ccgtcgccgtcgccgtcgct 70
>dbj|AK171402.1| Mus musculus B6-derived CD11 +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F730203M07 product:SKI-like, full insert sequence Length = 3231 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 ccgtcgccgtcgccgtcgct 22 |||||||||||||||||||| Sbjct: 40 ccgtcgccgtcgccgtcgct 21
>gb|AE016816.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome III, complete sequence Length = 907057 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 ccgtcgccgtcgccgtcgct 22 |||||||||||||||||||| Sbjct: 88382 ccgtcgccgtcgccgtcgct 88363
>dbj|AK087797.1| Mus musculus 2 days pregnant adult female ovary cDNA, RIKEN full-length enriched library, clone:E330022D18 product:ski/sno related, full insert sequence Length = 1666 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 ccgtcgccgtcgccgtcgct 22 |||||||||||||||||||| Sbjct: 40 ccgtcgccgtcgccgtcgct 21
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 gtcgccgtcgccgtcgcttt 24 |||||||||||||||||||| Sbjct: 20564737 gtcgccgtcgccgtcgcttt 20564756
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 ctccgtcgccgtcgccgtcg 20 |||||||||||||||||||| Sbjct: 21707100 ctccgtcgccgtcgccgtcg 21707081 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 tccgtcgccgtcgccgtcgc 21 |||||||||||||||||||| Sbjct: 21104939 tccgtcgccgtcgccgtcgc 21104920 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 tccgtcgccgtcgccgtcgc 21 |||||||||||||||||||| Sbjct: 3384261 tccgtcgccgtcgccgtcgc 3384280
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 ctccgtcgccgtcgccgtcg 20 |||||||||||||||||||| Sbjct: 30503442 ctccgtcgccgtcgccgtcg 30503423 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 ccgtcgccgtcgccgtcgct 22 |||||||||||||||||||| Sbjct: 15546140 ccgtcgccgtcgccgtcgct 15546159 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 ccgtcgccgtcgccgtcgct 22 |||||||||||||||||||| Sbjct: 5610714 ccgtcgccgtcgccgtcgct 5610695
>gb|AC084645.1|CBRG45L11 Caenorhabditis briggsae cosmid G45L11, complete sequence Length = 41337 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 tccgtcgccgtcgccgtcgc 21 |||||||||||||||||||| Sbjct: 23208 tccgtcgccgtcgccgtcgc 23189
>dbj|AP003274.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0512C01 Length = 176261 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 tccgtcgccgtcgccgtcgc 21 |||||||||||||||||||| Sbjct: 175176 tccgtcgccgtcgccgtcgc 175195
>dbj|AP003239.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0403C05 Length = 151085 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 tccgtcgccgtcgccgtcgc 21 |||||||||||||||||||| Sbjct: 4115 tccgtcgccgtcgccgtcgc 4134
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 tccgtcgccgtcgccgtcgc 21 |||||||||||||||||||| Sbjct: 1925201 tccgtcgccgtcgccgtcgc 1925182
>gb|AC105928.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0014O06, complete sequence Length = 168031 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 ccgtcgccgtcgccgtcgct 22 |||||||||||||||||||| Sbjct: 75200 ccgtcgccgtcgccgtcgct 75181
>dbj|AP004401.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0534A03 Length = 153170 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 ctccgtcgccgtcgccgtcg 20 |||||||||||||||||||| Sbjct: 24283 ctccgtcgccgtcgccgtcg 24264
>dbj|AP005810.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0696F12 Length = 165227 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 tccgtcgccgtcgccgtcgc 21 |||||||||||||||||||| Sbjct: 26300 tccgtcgccgtcgccgtcgc 26281
>dbj|AP003863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1058_A12 Length = 152269 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 tccgtcgccgtcgccgtcgc 21 |||||||||||||||||||| Sbjct: 148238 tccgtcgccgtcgccgtcgc 148219
>dbj|AP005633.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0463G11 Length = 154188 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 tccgtcgccgtcgccgtcgc 21 |||||||||||||||||||| Sbjct: 35909 tccgtcgccgtcgccgtcgc 35928
>gb|AC157893.2| Medicago truncatula chromosome 7 BAC clone mth2-7m13, complete sequence Length = 140479 Score = 40.1 bits (20), Expect = 5.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 233 ggtgaaaaattctttggcaattttccgtacccttacatgaatgg 276 |||||||||||||| |||||||| || | ||||||| |||||| Sbjct: 109634 ggtgaaaaattcttcggcaatttcccttttccttacacgaatgg 109677
>dbj|AP005893.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0030K05 Length = 157835 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 ccgtcgccgtcgccgtcgct 22 |||||||||||||||||||| Sbjct: 139430 ccgtcgccgtcgccgtcgct 139411
>dbj|AP005594.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0701E06 Length = 123415 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 ccgtcgccgtcgccgtcgct 22 |||||||||||||||||||| Sbjct: 957 ccgtcgccgtcgccgtcgct 938
>dbj|AP004664.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0428D12 Length = 141678 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 tccgtcgccgtcgccgtcgc 21 |||||||||||||||||||| Sbjct: 24081 tccgtcgccgtcgccgtcgc 24100
>dbj|AP005892.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0011D16 Length = 177329 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 ccgtcgccgtcgccgtcgct 22 |||||||||||||||||||| Sbjct: 6494 ccgtcgccgtcgccgtcgct 6475
>dbj|AP005727.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0038I09 Length = 153520 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 ccgtcgccgtcgccgtcgct 22 |||||||||||||||||||| Sbjct: 39844 ccgtcgccgtcgccgtcgct 39825
>dbj|AP004015.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1770_H02 Length = 170648 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 tccgtcgccgtcgccgtcgc 21 |||||||||||||||||||| Sbjct: 67974 tccgtcgccgtcgccgtcgc 67955
>dbj|AP003871.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1117_F10 Length = 169948 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 tccgtcgccgtcgccgtcgc 21 |||||||||||||||||||| Sbjct: 129137 tccgtcgccgtcgccgtcgc 129118
>dbj|AK110810.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-171-F04, full insert sequence Length = 1366 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 tccgtcgccgtcgccgtcgc 21 |||||||||||||||||||| Sbjct: 564 tccgtcgccgtcgccgtcgc 545
>dbj|AK110348.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-164-G12, full insert sequence Length = 929 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 tccgtcgccgtcgccgtcgc 21 |||||||||||||||||||| Sbjct: 129 tccgtcgccgtcgccgtcgc 148
>dbj|AK109605.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-137-F02, full insert sequence Length = 1985 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 ctccgtcgccgtcgccgtcg 20 |||||||||||||||||||| Sbjct: 75 ctccgtcgccgtcgccgtcg 56
>dbj|AK103518.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033131H17, full insert sequence Length = 2383 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 tccgtcgccgtcgccgtcgc 21 |||||||||||||||||||| Sbjct: 280 tccgtcgccgtcgccgtcgc 299
>dbj|AK102787.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107M19, full insert sequence Length = 2297 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 tccgtcgccgtcgccgtcgc 21 |||||||||||||||||||| Sbjct: 37 tccgtcgccgtcgccgtcgc 56
>dbj|AK102249.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033088G15, full insert sequence Length = 2253 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 tccgtcgccgtcgccgtcgc 21 |||||||||||||||||||| Sbjct: 150 tccgtcgccgtcgccgtcgc 169
>dbj|AK101718.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033060O11, full insert sequence Length = 1708 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ctccgtcgccgtcgccgtcg 20 |||||||||||||||||||| Sbjct: 181 ctccgtcgccgtcgccgtcg 200
>dbj|AK072138.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013123A15, full insert sequence Length = 3942 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 tccgtcgccgtcgccgtcgc 21 |||||||||||||||||||| Sbjct: 1732 tccgtcgccgtcgccgtcgc 1751
>ref|NM_208607.1| Eremothecium gossypii ACL150Wp (ACL150W), mRNA Length = 660 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 ccgtcgccgtcgccgtcgct 22 |||||||||||||||||||| Sbjct: 638 ccgtcgccgtcgccgtcgct 619
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 gtcgccgtcgccgtcgcttt 24 |||||||||||||||||||| Sbjct: 20874972 gtcgccgtcgccgtcgcttt 20874991
>gb|AC140250.3| Mus musculus BAC clone RP24-288J3 from 1, complete sequence Length = 163490 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 367 gtttggttttcattgtactg 386 |||||||||||||||||||| Sbjct: 117309 gtttggttttcattgtactg 117328
>gb|AC140461.4| Mus musculus BAC clone RP23-11M24 from 1, complete sequence Length = 202209 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 367 gtttggttttcattgtactg 386 |||||||||||||||||||| Sbjct: 1400 gtttggttttcattgtactg 1419
>gb|U95037.1|DVU95037 Drosophila decapentaplegic disk regulatory region: SLY1 homolog (Slh) and out at first (oaf) genes, complete cds Length = 21877 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 ccgtcgccgtcgccgtcgct 22 |||||||||||||||||||| Sbjct: 21096 ccgtcgccgtcgccgtcgct 21077
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Length = 3066374 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 ccgtcgccgtcgccgtcgct 22 |||||||||||||||||||| Sbjct: 48412 ccgtcgccgtcgccgtcgct 48431 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,945,985 Number of Sequences: 3902068 Number of extensions: 3945985 Number of successful extensions: 105706 Number of sequences better than 10.0: 127 Number of HSP's better than 10.0 without gapping: 142 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 102720 Number of HSP's gapped (non-prelim): 2979 length of query: 420 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 398 effective length of database: 17,147,199,772 effective search space: 6824585509256 effective search space used: 6824585509256 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
