ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl13b07 |
|---|---|
| Clone Library Name | barley_pub |
>CESA1_ARATH (O48946) Cellulose synthase A catalytic subunit 1 [UDP-forming] (EC| 2.4.1.12) (AtCesA-1) (Radially swollen protein 1) (AtRSW1) Length = 1081 Score = 93.6 bits (231), Expect = 2e-19 Identities = 44/73 (60%), Positives = 54/73 (73%) Frame = +1 Query: 205 MAANRGMVAGSHNRNEFVMIRNDGDAPAPGKEVRGAGGQGCQICGDTVGVSATGDVFVAX 384 M A+ G+VAGS+ RNE V IR++ D K ++ GQ CQICGD VG++ TGDVFVA Sbjct: 1 MEASAGLVAGSYRRNELVRIRHESDGGT--KPLKNMNGQICQICGDDVGLAETGDVFVAC 58 Query: 385 HECAFPVCRPCYE 423 +ECAFPVCRPCYE Sbjct: 59 NECAFPVCRPCYE 71
>CESA7_ARATH (Q9SWW6) Cellulose synthase A catalytic subunit 7 [UDP-forming] (EC| 2.4.1.12) (AtCesA-7) (Irregular xylem protein 3) (AtIRX3) Length = 1026 Score = 87.4 bits (215), Expect = 1e-17 Identities = 39/73 (53%), Positives = 51/73 (69%) Frame = +1 Query: 205 MAANRGMVAGSHNRNEFVMIRNDGDAPAPGKEVRGAGGQGCQICGDTVGVSATGDVFVAX 384 M A+ G+VAGSHNRNE V+I N + K ++ GQ C+ICGD +G++ GD+FVA Sbjct: 1 MEASAGLVAGSHNRNELVVIHNHEEP----KPLKNLDGQFCEICGDQIGLTVEGDLFVAC 56 Query: 385 HECAFPVCRPCYE 423 +EC FP CRPCYE Sbjct: 57 NECGFPACRPCYE 69
>CESA5_ARATH (Q8L778) Cellulose synthase A catalytic subunit 5 [UDP-forming] (EC| 2.4.1.12) (AtCesA-5) Length = 1069 Score = 84.0 bits (206), Expect = 1e-16 Identities = 39/67 (58%), Positives = 47/67 (70%) Frame = +1 Query: 223 MVAGSHNRNEFVMIRNDGDAPAPGKEVRGAGGQGCQICGDTVGVSATGDVFVAXHECAFP 402 ++AGSHNRNEFV+I D A + V GQ CQICGD + +S G+ FVA +ECAFP Sbjct: 7 LIAGSHNRNEFVLINADESARI--RSVEELSGQTCQICGDEIELSVDGESFVACNECAFP 64 Query: 403 VCRPCYE 423 VCRPCYE Sbjct: 65 VCRPCYE 71
>CESA2_ARATH (O48947) Cellulose synthase A catalytic subunit 2 [UDP-forming] (EC| 2.4.1.12) (AtCesA-2) (Ath-A) Length = 1084 Score = 82.8 bits (203), Expect = 3e-16 Identities = 37/67 (55%), Positives = 49/67 (73%) Frame = +1 Query: 223 MVAGSHNRNEFVMIRNDGDAPAPGKEVRGAGGQGCQICGDTVGVSATGDVFVAXHECAFP 402 ++AGSHNRNEFV+I D A + V+ GQ CQICGD + ++ + ++FVA +ECAFP Sbjct: 7 LIAGSHNRNEFVLINADESARI--RSVQELSGQTCQICGDEIELTVSSELFVACNECAFP 64 Query: 403 VCRPCYE 423 VCRPCYE Sbjct: 65 VCRPCYE 71
>CESA6_ARATH (Q94JQ6) Cellulose synthase A catalytic subunit 6 [UDP-forming] (EC| 2.4.1.12) (AtCesA-6) (Isoxaben resistant protein 2) (Protein PROCUSTE1) (Protein Quill) (AraxCelA) Length = 1084 Score = 80.5 bits (197), Expect = 2e-15 Identities = 37/67 (55%), Positives = 48/67 (71%) Frame = +1 Query: 223 MVAGSHNRNEFVMIRNDGDAPAPGKEVRGAGGQGCQICGDTVGVSATGDVFVAXHECAFP 402 ++AGSHNRNEFV+I D +A + V+ GQ CQIC D + ++ G+ FVA +ECAFP Sbjct: 7 LIAGSHNRNEFVLINADENARI--RSVQELSGQTCQICRDEIELTVDGEPFVACNECAFP 64 Query: 403 VCRPCYE 423 VCRPCYE Sbjct: 65 VCRPCYE 71
>CESAA_ARATH (Q9SKJ5) Probable cellulose synthase A catalytic subunit 10| [UDP-forming] (EC 2.4.1.12) (AtCesA-10) (AtCesA-13) Length = 1065 Score = 76.6 bits (187), Expect = 2e-14 Identities = 37/67 (55%), Positives = 47/67 (70%) Frame = +1 Query: 223 MVAGSHNRNEFVMIRNDGDAPAPGKEVRGAGGQGCQICGDTVGVSATGDVFVAXHECAFP 402 MVAGS+ R EFV R+D D K ++ GQ CQICGD VG++ TG+VFVA +EC FP Sbjct: 1 MVAGSYRRYEFVRNRDDSDDGL--KPLKDLNGQICQICGDDVGLTKTGNVFVACNECGFP 58 Query: 403 VCRPCYE 423 +C+ CYE Sbjct: 59 LCQSCYE 65
>CESA9_ARATH (Q9SJ22) Probable cellulose synthase A catalytic subunit 9| [UDP-forming] (EC 2.4.1.12) (AtCesA-9) Length = 1088 Score = 74.3 bits (181), Expect = 1e-13 Identities = 34/67 (50%), Positives = 44/67 (65%) Frame = +1 Query: 223 MVAGSHNRNEFVMIRNDGDAPAPGKEVRGAGGQGCQICGDTVGVSATGDVFVAXHECAFP 402 ++AGSHNRNEFV+I D A E GQ C+IC D + ++ G+ F+A +ECAFP Sbjct: 7 LIAGSHNRNEFVLINADDTARIRSAEE--LSGQTCKICRDEIELTDNGEPFIACNECAFP 64 Query: 403 VCRPCYE 423 CRPCYE Sbjct: 65 TCRPCYE 71
>CESA3_ARATH (Q941L0) Cellulose synthase A catalytic subunit 3 [UDP-forming] (EC| 2.4.1.12) (AtCesA-3) (Constitutive expression of VSP1 protein 1) (Isoxaben resistant protein 1) (Ath-B) Length = 1065 Score = 58.2 bits (139), Expect = 8e-09 Identities = 25/51 (49%), Positives = 31/51 (60%) Frame = +1 Query: 271 DGDAPAPGKEVRGAGGQGCQICGDTVGVSATGDVFVAXHECAFPVCRPCYE 423 + + GK ++ Q CQIC D VG + GD FVA C+FPVCRPCYE Sbjct: 2 ESEGETAGKPMKNIVPQTCQICSDNVGKTVDGDRFVACDICSFPVCRPCYE 52
>CESA8_ARATH (Q8LPK5) Cellulose synthase A catalytic subunit 8 [UDP-forming] (EC| 2.4.1.12) (AtCesA-8) (Irregular xylem protein 1) (AtIRX1) Length = 985 Score = 50.4 bits (119), Expect = 2e-06 Identities = 17/33 (51%), Positives = 24/33 (72%) Frame = +1 Query: 325 CQICGDTVGVSATGDVFVAXHECAFPVCRPCYE 423 C CG+ +GV + G+ FVA HEC+FP+C+ C E Sbjct: 9 CNTCGEEIGVKSNGEFFVACHECSFPICKACLE 41
>CESA4_ARATH (Q84JA6) Cellulose synthase A catalytic subunit 4 [UDP-forming] (EC| 2.4.1.12) (AtCesA-4) (Irregular xylem protein 5) (AtIRX5) Length = 1049 Score = 49.3 bits (116), Expect = 4e-06 Identities = 18/33 (54%), Positives = 22/33 (66%) Frame = +1 Query: 325 CQICGDTVGVSATGDVFVAXHECAFPVCRPCYE 423 C++CGD V G FVA H C +PVC+PCYE Sbjct: 23 CKVCGDEVKDDDNGQTFVACHVCVYPVCKPCYE 55
>MUC2_HUMAN (Q02817) Mucin-2 precursor (Intestinal mucin 2)| Length = 5179 Score = 31.6 bits (70), Expect = 0.81 Identities = 21/71 (29%), Positives = 26/71 (36%) Frame = -1 Query: 389 SXQATKTSPVAETPTVSPHIWQP*PPAPLTSLPGAGASPSLRIMTNSLRLCDPATIPRLA 210 S T SP T T P P PP T+ P +PS I T + L P ++ Sbjct: 1400 SPPTTTPSPPPTTTTTLPPTTTPSPPTTTTTTPPPTTTPSPPITTTTTPLPTTTPSPPIS 1459 Query: 209 AIFRSPAALTP 177 P TP Sbjct: 1460 TTTTPPPTTTP 1470
>GSCR1_HUMAN (Q9NZM4) Glioma tumor suppressor candidate region gene 1 protein| Length = 1509 Score = 27.7 bits (60), Expect(2) = 1.8 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = -3 Query: 240 VRPRDHPPVGRHLSLPRRPHTPPAAVTKA 154 +RP+ PP G LP PH PP++ + A Sbjct: 811 LRPQSQPPEG---PLPPAPHLPPSSTSSA 836 Score = 21.2 bits (43), Expect(2) = 1.8 Identities = 13/41 (31%), Positives = 15/41 (36%) Frame = -1 Query: 341 SPHIWQP*PPAPLTSLPGAGASPSLRIMTNSLRLCDPATIP 219 SPH+ P P P + P S S L C P P Sbjct: 737 SPHLPSPHPTRPPSRPPSRPQSVSRPPSEPPLHPCPPPQAP 777
>KLF6_RAT (O35819) Krueppel-like factor 6 (Core promoter element-binding| protein) (Transcription factor Zf9) Length = 283 Score = 30.4 bits (67), Expect = 1.8 Identities = 18/49 (36%), Positives = 21/49 (42%) Frame = +1 Query: 274 GDAPAPGKEVRGAGGQGCQICGDTVGVSATGDVFVAXHECAFPVCRPCY 420 GD P+PGK G G+ GD A+ D H C F CR Y Sbjct: 167 GDLPSPGKVRSGTSGKS----GDKGSGDASPDGRRRVHRCHFNGCRKVY 211
>KLF6_MOUSE (O08584) Krueppel-like factor 6 (Core promoter element-binding| protein) Length = 283 Score = 30.4 bits (67), Expect = 1.8 Identities = 18/49 (36%), Positives = 21/49 (42%) Frame = +1 Query: 274 GDAPAPGKEVRGAGGQGCQICGDTVGVSATGDVFVAXHECAFPVCRPCY 420 GD P+PGK G G+ GD A+ D H C F CR Y Sbjct: 167 GDLPSPGKVRSGTSGKS----GDKGNGDASPDGRRRVHRCHFNGCRKVY 211
>OXR1_ASPFU (Q4WX99) Oxidation resistance protein 1| Length = 324 Score = 30.4 bits (67), Expect = 1.8 Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 4/67 (5%) Frame = -1 Query: 410 RQTGKAHSXQATKTSPVAETPTVSPHIWQP*PPAPLTSLPGAGASPSLRIMTNSL----R 243 R+ ++ ++ TSP P + +QP P PLT PG G P +++T +L R Sbjct: 77 RKMNARNNRDSSTTSPDIFVPIRTASPFQPPPLTPLTLTPGPGV-PQQQLLTRALAEEIR 135 Query: 242 LCDPATI 222 L PA + Sbjct: 136 LLVPARL 142
>CSKI2_MOUSE (Q8VHK1) Caskin-2| Length = 1201 Score = 29.6 bits (65), Expect = 3.1 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%) Frame = -1 Query: 323 P*PPAPLTSLPGAGASPS-LRIMTNSLRLCDPATIPRL 213 P PPA L +PGAG +P + + L P PRL Sbjct: 1085 PAPPAALLKVPGAGTAPKPVSVACTQLAFSGPKLAPRL 1122
>BBC1_YEAST (P47068) Myosin tail region-interacting protein MTI1 (BBC1 protein)| Length = 1157 Score = 29.3 bits (64), Expect = 4.0 Identities = 23/91 (25%), Positives = 37/91 (40%), Gaps = 13/91 (14%) Frame = -3 Query: 402 REGALMXGNKDITGGRNANSVTTYLAALTTRASYLLTRGGRVAVVADHDELIAIV-RPRD 226 R G++ K I+G S+ Y ++T +S L +++ A +++ V P D Sbjct: 628 RNGSINSLTKSISGENRRKSINEYHDTVSTNSSALTETAQDISMAAPAAPVLSKVSHPED 687 Query: 225 H------------PPVGRHLSLPRRPHTPPA 169 PPV S+P P PPA Sbjct: 688 KVPPHPVPSAPSAPPVPSAPSVPSAPPVPPA 718
>RP3A_RAT (P47709) Rabphilin-3A (Exophilin-1)| Length = 684 Score = 29.3 bits (64), Expect = 4.0 Identities = 14/42 (33%), Positives = 21/42 (50%) Frame = -1 Query: 398 KAHSXQATKTSPVAETPTVSPHIWQP*PPAPLTSLPGAGASP 273 +A+S QA++ +P + P QP PP + PG G P Sbjct: 271 RANSVQASRPAPASMPSPAPPQPVQPGPPGGSRAAPGPGRFP 312
>POLR_EPMV (P20126) RNA replicase polyprotein (EC 2.7.7.48)| Length = 1839 Score = 29.3 bits (64), Expect = 4.0 Identities = 25/70 (35%), Positives = 33/70 (47%), Gaps = 2/70 (2%) Frame = -1 Query: 380 ATKTSPVAETPTVSPHIWQP*PPAPLTSLPGAGASPSLRIMTNSLRLCDPATIPRLAAIF 201 +T +SP + PT+SPH+ P PLT P SP N CD A +P AA+ Sbjct: 600 STSSSPPLQEPTLSPHLIHP----PLTREP----SP-----LNGC-ACDSALLPSTAAMT 645 Query: 200 RS--PAALTP 177 + P L P Sbjct: 646 SAEHPTPLNP 655
>VGLG_HHV2H (P13290) Glycoprotein G| Length = 699 Score = 28.9 bits (63), Expect = 5.3 Identities = 28/83 (33%), Positives = 32/83 (38%), Gaps = 13/83 (15%) Frame = -1 Query: 389 SXQATKTSPVAETPTVSPHIW------------QP*PPAPLTSLP-GAGASPSLRIMTNS 249 S A KT P PT P Q PP P T P GA A+P+ + Sbjct: 440 SASAAKTPPTTPAPTTPPPTSTHATPRPTTPGPQTTPPGPATPGPVGASAAPT---ADSP 496 Query: 248 LRLCDPATIPRLAAIFRSPAALT 180 L PAT P +A S AA T Sbjct: 497 LTASPPATAPGPSAANVSVAATT 519
>HCN4_RAT (Q9JKA7) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 4 Length = 1198 Score = 28.9 bits (63), Expect = 5.3 Identities = 27/69 (39%), Positives = 35/69 (50%), Gaps = 1/69 (1%) Frame = -1 Query: 395 AHSXQATKTSPVAETPTVSPHIWQP*PPAPLTSLPGAGASPSLRI-MTNSLRLCDPATIP 219 AH QA ++ TPT +P IW P APL + A A+ S+ I +T+ RL Sbjct: 756 AHRVQAAASA----TPTPTPVIWTPLIQAPLQA---AAATTSVAIALTHHPRL------- 801 Query: 218 RLAAIFRSP 192 AAIFR P Sbjct: 802 -PAAIFRPP 809
>HCN4_MOUSE (O70507) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 4 (Brain cyclic nucleotide gated channel 3) (BCNG-3) Length = 1186 Score = 28.9 bits (63), Expect = 5.3 Identities = 27/69 (39%), Positives = 35/69 (50%), Gaps = 1/69 (1%) Frame = -1 Query: 395 AHSXQATKTSPVAETPTVSPHIWQP*PPAPLTSLPGAGASPSLRI-MTNSLRLCDPATIP 219 AH QA ++ TPT +P IW P APL + A A+ S+ I +T+ RL Sbjct: 741 AHRVQAAASA----TPTPTPVIWTPLIQAPLQA---AAATTSVAIALTHHPRL------- 786 Query: 218 RLAAIFRSP 192 AAIFR P Sbjct: 787 -PAAIFRPP 794
>HCN4_HUMAN (Q9Y3Q4) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 4 Length = 1203 Score = 28.9 bits (63), Expect = 5.3 Identities = 27/69 (39%), Positives = 35/69 (50%), Gaps = 1/69 (1%) Frame = -1 Query: 395 AHSXQATKTSPVAETPTVSPHIWQP*PPAPLTSLPGAGASPSLRI-MTNSLRLCDPATIP 219 AH QA ++ TPT +P IW P APL + A A+ S+ I +T+ RL Sbjct: 756 AHRVQAAASA----TPTPTPVIWTPLIQAPLQA---AAATTSVAIALTHHPRL------- 801 Query: 218 RLAAIFRSP 192 AAIFR P Sbjct: 802 -PAAIFRPP 809
>ACCN3_HUMAN (Q9UHC3) Amiloride-sensitive cation channel 3 (Acid-sensing ion| channel 3) (ASIC3) (hASIC3) (Testis sodium channel 1) (hTNaC1) Length = 531 Score = 28.9 bits (63), Expect = 5.3 Identities = 13/17 (76%), Positives = 13/17 (76%) Frame = -3 Query: 207 HLSLPRRPHTPPAAVTK 157 HLSL RP TPP AVTK Sbjct: 500 HLSLGPRPPTPPCAVTK 516
>TUS1_YEAST (Q06412) Rho1 guanine nucleotide exchange factor TUS1 (TOR unique| function suppressor protein 1) Length = 1307 Score = 28.9 bits (63), Expect = 5.3 Identities = 20/71 (28%), Positives = 29/71 (40%) Frame = -1 Query: 392 HSXQATKTSPVAETPTVSPHIWQP*PPAPLTSLPGAGASPSLRIMTNSLRLCDPATIPRL 213 HS + TS TP + ++ + PP P P L T S+R+ P P Sbjct: 80 HSARGNGTSSSESTPKSTKYVKERRPPPP----------PPLLYSTESIRIDSPMVSPSS 129 Query: 212 AAIFRSPAALT 180 + RSP L+ Sbjct: 130 QSRERSPNKLS 140
>YH17_YEAST (P38898) Hypothetical 17.1 kDa protein in PUR5 3'region| Length = 153 Score = 28.9 bits (63), Expect = 5.3 Identities = 23/73 (31%), Positives = 26/73 (35%) Frame = -1 Query: 392 HSXQATKTSPVAETPTVSPHIWQP*PPAPLTSLPGAGASPSLRIMTNSLRLCDPATIPRL 213 H T T P TPT PH P P T P +P + SL L P+ P Sbjct: 29 HPHTPTHTHPHTPTPTPHPHPHTPHPHTTPTPTPHHTHTPHTTLSNLSLNL--PSHYP-- 84 Query: 212 AAIFRSPAALTPH 174 SP PH Sbjct: 85 ----TSPLVTLPH 93
>APP1_SCHPO (Q9P7E8) Protein app1| Length = 857 Score = 23.9 bits (50), Expect(2) = 6.5 Identities = 10/20 (50%), Positives = 11/20 (55%) Frame = -3 Query: 219 PVGRHLSLPRRPHTPPAAVT 160 PV HL P R PPA+ T Sbjct: 357 PVSHHLKSPVRTSFPPASTT 376 Score = 23.1 bits (48), Expect(2) = 6.5 Identities = 10/40 (25%), Positives = 16/40 (40%) Frame = -3 Query: 330 LAALTTRASYLLTRGGRVAVVADHDELIAIVRPRDHPPVG 211 ++ TT +SY DH +L + + PP G Sbjct: 277 ISTTTTGSSYRSAESSHAPTTPDHFKLTPLTKLEPQPPSG 316
>NOTC2_HUMAN (Q04721) Neurogenic locus notch homolog protein 2 precursor (Notch 2)| (hN2) [Contains: Notch 2 extracellular truncation; Notch 2 intracellular domain] Length = 2471 Score = 28.5 bits (62), Expect = 6.9 Identities = 9/22 (40%), Positives = 14/22 (63%) Frame = -3 Query: 240 VRPRDHPPVGRHLSLPRRPHTP 175 + P+ PP G+H++ PR P P Sbjct: 2282 IAPQSRPPEGKHITTPREPLPP 2303
>PTN23_RAT (O88902) Tyrosine-protein phosphatase non-receptor type 23 (EC| 3.1.3.48) (His-domain-containing protein tyrosine phosphatase) (HD-PTP) (Protein tyrosine phosphatase TD14) (PTP-TD14) (Fragment) Length = 1499 Score = 28.5 bits (62), Expect = 6.9 Identities = 18/59 (30%), Positives = 23/59 (38%) Frame = -1 Query: 350 PTVSPHIWQP*PPAPLTSLPGAGASPSLRIMTNSLRLCDPATIPRLAAIFRSPAALTPH 174 P+ +P I P PP P T PG P T P T+P + P+ PH Sbjct: 849 PSQAPGILTPPPPYPFTPQPGVLGQPPPTRHTQLYPGPPPDTLPPHSGALPFPSPGPPH 907
>ANK3_HUMAN (Q12955) Ankyrin-3 (ANK-3) (Ankyrin-G)| Length = 4377 Score = 28.5 bits (62), Expect = 6.9 Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 2/52 (3%) Frame = -1 Query: 401 GKAHSXQATKTSPVAETPTVSP--HIWQP*PPAPLTSLPGAGASPSLRIMTN 252 G A S + +S + TP+ SP IW P+P+ S GA + S++ +++ Sbjct: 1515 GPAKSGFTSLSSSSSNTPSASPLKSIWSVSTPSPIKSTLGASTTSSVKSISD 1566
>VRP1_YEAST (P37370) Verprolin| Length = 817 Score = 28.5 bits (62), Expect = 6.9 Identities = 15/36 (41%), Positives = 20/36 (55%) Frame = -1 Query: 377 TKTSPVAETPTVSPHIWQP*PPAPLTSLPGAGASPS 270 T+T +++ PT SP P PP+P T G SPS Sbjct: 691 TETESISKNPTKSP----PPPPSPSTMDTGTSNSPS 722
>ODO2_PIG (Q9N0F1) Dihydrolipoyllysine-residue succinyltransferase component| of 2-oxoglutarate dehydrogenase complex, mitochondrial precursor (EC 2.3.1.61) (Dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex) (E2) (E2K) Length = 455 Score = 28.5 bits (62), Expect = 6.9 Identities = 15/37 (40%), Positives = 18/37 (48%) Frame = -1 Query: 380 ATKTSPVAETPTVSPHIWQP*PPAPLTSLPGAGASPS 270 A P A PT P + P PP PLTS P + P+ Sbjct: 173 AVPPPPAASIPTQMPPV--PSPPQPLTSKPVSAVKPT 207
>YTUB_ENTAG (Q47826) Hypothetical protein in tutB 3'region (Fragment)| Length = 204 Score = 28.1 bits (61), Expect = 9.0 Identities = 10/26 (38%), Positives = 16/26 (61%) Frame = -3 Query: 231 RDHPPVGRHLSLPRRPHTPPAAVTKA 154 RDHP + L+ P +PH+ P + +A Sbjct: 140 RDHPLIVADLAQPHQPHSAPGIIVEA 165
>RP3A_MOUSE (P47708) Rabphilin-3A (Exophilin-1)| Length = 681 Score = 28.1 bits (61), Expect = 9.0 Identities = 14/42 (33%), Positives = 19/42 (45%) Frame = -1 Query: 398 KAHSXQATKTSPVAETPTVSPHIWQP*PPAPLTSLPGAGASP 273 +A+S QA + +P P QP PP + PG G P Sbjct: 268 RANSVQAARPAPAPVPSPAPPQPVQPGPPGGSRATPGPGRFP 309
>E2F2_MOUSE (P56931) Transcription factor E2F2 (E2F-2)| Length = 443 Score = 28.1 bits (61), Expect = 9.0 Identities = 19/46 (41%), Positives = 21/46 (45%) Frame = -1 Query: 368 SPVAETPTVSPHIWQP*PPAPLTSLPGAGASPSLRIMTNSLRLCDP 231 S +AET S I QP PP P LP A + L N L L P Sbjct: 341 SGIAETIEPSVLIPQPIPPPPPPPLPPAPSLVPLEATDNMLELSHP 386 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 43,362,462 Number of Sequences: 219361 Number of extensions: 726518 Number of successful extensions: 3130 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 2938 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3114 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2336739400 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
