>PALF_KLULA (Q6CTM7) pH-response regulator protein palF/RIM8|
          Length = 572

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -3

Query: 418 YFPHSHPPPAPSDCVLTDKDMSVLSISTPSP 326
           Y  H H  P+PS  + TD DM++   + P P
Sbjct: 504 YLLHRHNGPSPSSRIFTDTDMTLCYPADPVP 534

>FGD5_MOUSE (Q80UZ0) FYVE, RhoGEF and PH domain-containing protein 5|
          Length = 1219

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +2

Query: 284 LQPGNIFPHDGMVSRARGGDGENRHVFISEYTI 382
           LQPG  F  +G + R RG     RH+F+   T+
Sbjct: 864 LQPGREFLKEGTLMRVRGKSRHPRHLFLMNDTL 896


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,810,481
Number of Sequences: 219361
Number of extensions: 873924
Number of successful extensions: 2864
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2768
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2864
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2909956200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)