Clone Information

BLAST Search Result

Clone Name	bastl13b01
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	MIB_DROME (Q9VUX2) Ubiquitin ligase protein mind-bomb (EC 6.3.2....	40	0.003
2	MIB1_MOUSE (Q80SY4) Ubiquitin ligase protein MIB1 (EC 6.3.2.-) (...	40	0.004
3	MIB1_HUMAN (Q86YT6) Ubiquitin ligase protein MIB1 (EC 6.3.2.-) (...	40	0.004
4	MIB1_BRARE (Q804S5) Ubiquitin ligase protein mib (EC 6.3.2.-) (M...	39	0.006
5	MIB1_XENLA (Q6GNY1) Ubiquitin ligase protein MIB1 (EC 6.3.2.-) (...	39	0.007
6	AMFR_MOUSE (Q9R049) Autocrine motility factor receptor (EC 6.3.2...	37	0.036
7	RKHD1_HUMAN (Q86XN8) RING finger and KH domain-containing protein 1	35	0.14
8	IAP4_NPVOP (O10345) Putative apoptosis inhibitor 4 (IAP-4)	34	0.18
9	RAD18_KLULA (Q6CTZ8) Postreplication repair ubiquitin-protein li...	34	0.18
10	IAP2_NPVAC (P41454) Probable apoptosis inhibitor 2 (IAP-2)	34	0.23
11	BIRC3_HUMAN (Q13489) Baculoviral IAP repeat-containing protein 3...	34	0.23
12	MIB2_HUMAN (Q96AX9) Ubiquitin ligase protein MIB2 (EC 6.3.2.-) (...	34	0.23
13	MIB2_RAT (Q68LP1) Ubiquitin ligase protein MIB2 (EC 6.3.2.-) (Mi...	34	0.23
14	BIRC2_HUMAN (Q13490) Baculoviral IAP repeat-containing protein 2...	34	0.23
15	BIR_CHICK (Q90660) Inhibitor of apoptosis protein (IAP) (Inhibit...	33	0.30
16	NEURL_MOUSE (Q923S6) Neuralized-like protein 1 (m-neuralized 1) ...	33	0.30
17	MIB2_MOUSE (Q8R516) Ubiquitin ligase protein MIB2 (EC 6.3.2.-) (...	33	0.30
18	BIRC2_MOUSE (Q62210) Baculoviral IAP repeat-containing protein 2...	33	0.30
19	PIAP_PIG (O62640) Putative inhibitor of apoptosis	33	0.30
20	NEUL1_HUMAN (O76050) Neuralized-like protein 1 (h-neuralized 1) ...	33	0.40
21	BIRC3_MOUSE (O08863) Baculoviral IAP repeat-containing protein 3...	33	0.40
22	AMFR2_HUMAN (Q9UKV5) Autocrine motility factor receptor, isoform...	33	0.40
23	SM3L2_ARATH (Q9FNI6) Putative SWI/SNF-related matrix-associated ...	32	0.67
24	BIRC7_HUMAN (Q96CA5) Baculoviral IAP repeat-containing protein 7...	32	1.2
25	IAP2_DROME (Q24307) Apoptosis 2 inhibitor (Inhibitor of apoptosi...	31	1.5
26	RNGB_DICDI (Q7M3S9) Ring finger protein B (Protein rngB)	31	2.0
27	RNF34_MOUSE (Q99KR6) RING finger protein 34 (RING finger protein...	31	2.0
28	RNF34_PONPY (Q5NVC7) RING finger protein 34	31	2.0
29	RNF34_HUMAN (Q969K3) RING finger protein 34 (RING finger protein...	31	2.0
30	RNF34_BOVIN (Q5E9J6) RING finger protein 34	31	2.0
31	RNF34_RAT (Q6AYH3) RING finger protein 34 (RING finger protein M...	31	2.0
32	MYLIP_BRARE (Q6TEM9) Ubiquitin ligase MYLIP (EC 6.3.2.-) (Myosin...	31	2.0
33	TRAF6_HUMAN (Q9Y4K3) TNF receptor-associated factor 6 (Interleuk...	30	3.3
34	RFPL3_HUMAN (O75679) Ret finger protein-like 3	30	3.3
35	RFPL1_HUMAN (O75677) Ret finger protein-like 1 (RING finger prot...	30	3.3
36	MDM2_BRARE (O42354) Ubiquitin-protein ligase E3 Mdm2 (EC 6.3.2.-...	30	3.3
37	BIRC4_RAT (Q9R0I6) Baculoviral IAP repeat-containing protein 4 (...	30	3.3
38	TRAF6_MOUSE (P70196) TNF receptor-associated factor 6	30	3.3
39	PZRN3_HUMAN (Q9UPQ7) PDZ domain-containing RING finger protein 3...	30	3.3
40	TRI39_RAT (Q6MFZ5) Tripartite motif protein 39 (RING finger prot...	30	3.3
41	TRI39_MOUSE (Q9ESN2) Tripartite motif protein 39 (RING finger pr...	30	3.3
42	TRI39_HUMAN (Q9HCM9) Tripartite motif protein 39 (RING finger pr...	30	3.3
43	SPIKE_CVCAI (P36300) Spike glycoprotein precursor (Peplomer prot...	30	4.4
44	IAP2_NPVOP (O10324) Probable apoptosis inhibitor 2 (IAP-2)	30	4.4
45	SPL12_ARATH (Q9S7P5) Squamosa promoter-binding-like protein 12	30	4.4
46	ENAM_MOUSE (O55196) Enamelin precursor	30	4.4
47	NCOA6_MOUSE (Q9JL19) Nuclear receptor coactivator 6 (Amplified i...	30	4.4
48	RPA1_RAT (O54889) DNA-directed RNA polymerase I largest subunit ...	30	4.4
49	Y905_METJA (Q58315) Hypothetical protein MJ0905	30	4.4
50	TRI34_MOUSE (Q99PP6) Tripartite motif protein 34	29	5.7
51	KTR2_YEAST (P33550) Probable mannosyltransferase KTR2 (EC 2.4.1....	29	5.7
52	RAD18_CANGA (Q6FPI4) Postreplication repair ubiquitin-protein li...	29	5.7
53	SPYA_FELCA (P41689) Serine--pyruvate aminotransferase, mitochond...	29	5.7
54	NCOA6_HUMAN (Q14686) Nuclear receptor coactivator 6 (Amplified i...	29	5.7
55	BIRC8_HUMAN (Q96P09) Baculoviral IAP repeat-containing protein 8...	29	7.5
56	SPIKE_CVCAE (Q65984) Spike glycoprotein precursor (Peplomer prot...	29	7.5
57	YB1B_SCHPO (P87176) Hypothetical RING finger protein C3D6.11c in...	29	7.5
58	SPL1_ARATH (Q9SMX9) Squamosa promoter-binding-like protein 1	29	7.5
59	MYLIP_HUMAN (Q8WY64) Ubiquitin ligase MYLIP (EC 6.3.2.-) (Myosin...	29	7.5
60	SPYA_RAT (P09139) Serine--pyruvate aminotransferase, mitochondri...	29	7.5
61	SM3L3_ARATH (Q9FIY7) Putative SWI/SNF-related matrix-associated ...	29	7.5
62	NEK3_MOUSE (Q9R0A5) Serine/threonine-protein kinase Nek3 (EC 2.7...	29	7.5
63	RAD18_ASHGO (Q75EN0) Postreplication repair ubiquitin-protein li...	28	9.7
64	CBLC_HUMAN (Q9ULV8) Signal transduction protein CBL-C (SH3-bindi...	28	9.7
65	YUES_CAEEL (P90859) Hypothetical RING finger protein F26E4.11 in...	28	9.7
66	SSY1_YEAST (Q03770) Putative amino-acid permease SSY1	28	9.7
67	PZRN3_RAT (P68907) PDZ domain-containing RING finger protein 3 (...	28	9.7
68	PZRN3_MOUSE (Q69ZS0) PDZ domain-containing RING finger protein 3...	28	9.7
69	YJG4_YEAST (P47038) Hypothetical 13.9 kDa protein in SMC3-MRPL8 ...	28	9.7

>MIB_DROME (Q9VUX2) Ubiquitin ligase protein mind-bomb (EC 6.3.2.-) (Mind bomb|
            homolog) (D-mib)
          Length = 1226

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 17/44 (38%), Positives = 22/44 (50%)
 Frame = +2

Query: 125  DSCAVCADALEWVAYGPCGHREVCSTCVVRLRFVLEDSLCCICK 256
            D C VC+DA     + PCGH   C TC  R++       C IC+
Sbjct: 968  DECLVCSDAKRDTVFKPCGHVSCCETCAPRVK------KCLICR 1005



 Score = 36.2 bits (82), Expect = 0.047
 Identities = 16/53 (30%), Positives = 23/53 (43%)
 Frame = +2

Query: 116  EMDDSCAVCADALEWVAYGPCGHREVCSTCVVRLRFVLEDSLCCICKTDCPSV 274
            E  D C VC+D    V + PCGH   C  C   ++       C +C+T    +
Sbjct: 1012 EKIDECLVCSDRRAAVFFRPCGHMVACEHCSALMK------KCVLCRTQIDEI 1058

to top

>MIB1_MOUSE (Q80SY4) Ubiquitin ligase protein MIB1 (EC 6.3.2.-) (Mind bomb|
           homolog 1) (DAPK-interacting protein 1) (DIP-1)
          Length = 1006

 Score = 39.7 bits (91), Expect = 0.004
 Identities = 19/53 (35%), Positives = 25/53 (47%)
 Frame = +2

Query: 113 AEMDDSCAVCADALEWVAYGPCGHREVCSTCVVRLRFVLEDSLCCICKTDCPS 271
           +E  + C VC+D      +GPCGH   CS C  R++       C ICK    S
Sbjct: 813 SETLEECMVCSDMKRDTLFGPCGHIATCSLCSPRVK------KCLICKEQVQS 859



 Score = 33.5 bits (75), Expect = 0.30
 Identities = 21/78 (26%), Positives = 33/78 (42%)
 Frame = +2

Query: 125  DSCAVCADALEWVAYGPCGHREVCSTCVVRLRFVLEDSLCCICKTDCPSVFVTKAMGDYT 304
            + C VC+D    V + PCGH   C  C   ++  ++    C    +    F+T   G  +
Sbjct: 864  EECVVCSDKKAAVLFQPCGHMCACENCASLMKKCVQ----CRAVVERRVPFITCCGGKSS 919

Query: 305  KVISDFSVLPTEASEGNV 358
            +  SD      E S GN+
Sbjct: 920  EDPSD------EISSGNI 931

to top

>MIB1_HUMAN (Q86YT6) Ubiquitin ligase protein MIB1 (EC 6.3.2.-) (Mind bomb|
           homolog 1) (DAPK-interacting protein 1) (DIP-1) (Zinc
           finger ZZ type with ankyrin repeat domain protein 2)
          Length = 1006

 Score = 39.7 bits (91), Expect = 0.004
 Identities = 19/53 (35%), Positives = 25/53 (47%)
 Frame = +2

Query: 113 AEMDDSCAVCADALEWVAYGPCGHREVCSTCVVRLRFVLEDSLCCICKTDCPS 271
           +E  + C VC+D      +GPCGH   CS C  R++       C ICK    S
Sbjct: 813 SETLEECMVCSDMKRDTLFGPCGHIATCSLCSPRVK------KCLICKEQVQS 859



 Score = 32.7 bits (73), Expect = 0.52
 Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 10/51 (19%)
 Frame = +2

Query: 125  DSCAVCADALEWVAYGPCGHREVCSTCV------VRLRFVLEDS----LCC 247
            + C VC+D    V + PCGH   C  C       V+ R V+E      +CC
Sbjct: 864  EECVVCSDKKAAVLFQPCGHMCACENCANLMKKCVQCRAVVERRVPFIMCC 914

to top

>MIB1_BRARE (Q804S5) Ubiquitin ligase protein mib (EC 6.3.2.-) (Mind bomb|
           protein)
          Length = 1030

 Score = 39.3 bits (90), Expect = 0.006
 Identities = 18/49 (36%), Positives = 23/49 (46%)
 Frame = +2

Query: 125 DSCAVCADALEWVAYGPCGHREVCSTCVVRLRFVLEDSLCCICKTDCPS 271
           + C VC+D      +GPCGH   CS C  R++       C ICK    S
Sbjct: 815 EECMVCSDMKRDTLFGPCGHIATCSLCSPRVK------KCLICKEQVQS 857



 Score = 33.5 bits (75), Expect = 0.30
 Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 10/51 (19%)
 Frame = +2

Query: 125  DSCAVCADALEWVAYGPCGHREVCSTCV------VRLRFVLEDS----LCC 247
            + C VC+D    V + PCGH   C  C       V+ R V+E      LCC
Sbjct: 862  EECVVCSDKKAAVLFQPCGHMCACENCASLMKKCVQCRAVVERRTPFVLCC 912

to top

>MIB1_XENLA (Q6GNY1) Ubiquitin ligase protein MIB1 (EC 6.3.2.-) (Mind bomb|
           homolog 1)
          Length = 1011

 Score = 38.9 bits (89), Expect = 0.007
 Identities = 18/53 (33%), Positives = 25/53 (47%)
 Frame = +2

Query: 113 AEMDDSCAVCADALEWVAYGPCGHREVCSTCVVRLRFVLEDSLCCICKTDCPS 271
           +E  + C VC+D      +GPCGH   CS C  R++       C +CK    S
Sbjct: 814 SETLEECMVCSDLKRDTLFGPCGHIATCSLCSPRVK------KCLLCKEQVQS 860



 Score = 32.7 bits (73), Expect = 0.52
 Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 10/51 (19%)
 Frame = +2

Query: 125  DSCAVCADALEWVAYGPCGHREVCSTCV------VRLRFVLEDS----LCC 247
            + C VC+D    V + PCGH   C  C       V+ R V+E      +CC
Sbjct: 865  EECVVCSDKKAAVLFQPCGHMCACENCASLMKKCVQCRAVVERRVPFVMCC 915

to top

>AMFR_MOUSE (Q9R049) Autocrine motility factor receptor (EC 6.3.2.19) (AMF|
           receptor)
          Length = 643

 Score = 36.6 bits (83), Expect = 0.036
 Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 5/92 (5%)
 Frame = +2

Query: 122 DDSCAVCADALEWVAYGPCGHREVCSTCVVRLRFVLE-DSLCCICKTDCPSVFVTKAMGD 298
           +D CA+C D+++     PCGH    ++C   LR  LE D+ C  C+        ++A  D
Sbjct: 338 NDDCAICWDSMQAARKLPCGHL-FHNSC---LRSWLEQDTSCPTCRMSLNIADGSRARED 393

Query: 299 YTKVISDFSVLPTEASEG----NVGEYWYHED 382
           +     D +++P  A+EG    N   +++H D
Sbjct: 394 HQGENLDENLVPVAAAEGRPRLNQHNHFFHFD 425

to top

>RKHD1_HUMAN (Q86XN8) RING finger and KH domain-containing protein 1|
          Length = 485

 Score = 34.7 bits (78), Expect = 0.14
 Identities = 17/43 (39%), Positives = 20/43 (46%)
 Frame = +2

Query: 131 CAVCADALEWVAYGPCGHREVCSTCVVRLRFVLEDSLCCICKT 259
           C VCA+     A  PCGH   C  C VR+    E   C  C+T
Sbjct: 434 CVVCAEGEVMAALVPCGHNLFCMDCAVRICGKSEPE-CPACRT 475

to top

>IAP4_NPVOP (O10345) Putative apoptosis inhibitor 4 (IAP-4)|
          Length = 118

 Score = 34.3 bits (77), Expect = 0.18
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = +2

Query: 116 EMDDSCAVCADALEWVAYGPCGHREVCSTCVVRL 217
           E +D C VC    + +   PCGH  +C TC  R+
Sbjct: 81  EANDECIVCMSEPKRMVAAPCGHYTLCVTCSYRI 114

to top

>RAD18_KLULA (Q6CTZ8) Postreplication repair ubiquitin-protein ligase E3 RAD18|
           (EC 6.-.-.-)
          Length = 427

 Score = 34.3 bits (77), Expect = 0.18
 Identities = 16/52 (30%), Positives = 27/52 (51%)
 Frame = +2

Query: 131 CAVCADALEWVAYGPCGHREVCSTCVVRLRFVLEDSLCCICKTDCPSVFVTK 286
           C +C D L+     PCGH   CS C+   +++ ++S C +C +D     + K
Sbjct: 32  CHICKDFLKASVLTPCGH-SFCSICI--RKYLQKESKCPLCLSDLTESMLQK 80

to top

>IAP2_NPVAC (P41454) Probable apoptosis inhibitor 2 (IAP-2)|
          Length = 249

 Score = 33.9 bits (76), Expect = 0.23
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = +2

Query: 131 CAVCADALEWVAYGPCGHREVCSTCVVRLRFVLEDSLCCIC 253
           C VC D  + V + PC H  VC+ C  R +       CC+C
Sbjct: 202 CKVCFDREKSVCFMPCRHLAVCTECSRRCK------RCCVC 236

to top

>BIRC3_HUMAN (Q13489) Baculoviral IAP repeat-containing protein 3 (Inhibitor of|
           apoptosis protein 1) (HIAP1) (HIAP-1) (C-IAP2)
           (TNFR2-TRAF signaling complex protein 1) (IAP homolog C)
           (Apoptosis inhibitor 2) (API2)
          Length = 604

 Score = 33.9 bits (76), Expect = 0.23
 Identities = 16/44 (36%), Positives = 21/44 (47%)
 Frame = +2

Query: 128 SCAVCADALEWVAYGPCGHREVCSTCVVRLRFVLEDSLCCICKT 259
           +C VC D    + + PCGH  VC  C   LR       C IC++
Sbjct: 556 TCKVCMDKEVSIVFIPCGHLVVCKDCAPSLR------KCPICRS 593

to top

>MIB2_HUMAN (Q96AX9) Ubiquitin ligase protein MIB2 (EC 6.3.2.-) (Mind bomb|
           homolog 2) (Zinc finger ZZ type with ankyrin repeat
           domain protein 1) (Skeletrophin) (Novelzin) (Novel zinc
           finger protein) (Putative NF-kappa-B-activating protein
           002N)
          Length = 1013

 Score = 33.9 bits (76), Expect = 0.23
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +2

Query: 131 CAVCADALEWVAYGPCGHREVCSTCVVRLR 220
           C VC++    V + PC HR VC  C  R++
Sbjct: 890 CLVCSELALLVLFSPCQHRTVCEECARRMK 919

to top

>MIB2_RAT (Q68LP1) Ubiquitin ligase protein MIB2 (EC 6.3.2.-) (Mind bomb|
           homolog 2) (RBSC-skeletrophin/dystrophin-like
           polypeptide)
          Length = 971

 Score = 33.9 bits (76), Expect = 0.23
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +2

Query: 131 CAVCADALEWVAYGPCGHREVCSTCVVRLR 220
           C VC++    V + PC HR VC  C  R++
Sbjct: 848 CLVCSELALLVLFSPCQHRTVCEECARRMK 877

to top

>BIRC2_HUMAN (Q13490) Baculoviral IAP repeat-containing protein 2 (Inhibitor of|
           apoptosis protein 2) (HIAP2) (HIAP-2) (C-IAP1)
           (TNFR2-TRAF signaling complex protein 2) (IAP homolog B)
          Length = 618

 Score = 33.9 bits (76), Expect = 0.23
 Identities = 17/43 (39%), Positives = 20/43 (46%)
 Frame = +2

Query: 128 SCAVCADALEWVAYGPCGHREVCSTCVVRLRFVLEDSLCCICK 256
           +C VC D    V + PCGH  VC  C   LR       C IC+
Sbjct: 570 TCKVCMDKEVSVVFIPCGHLVVCQECAPSLR------KCPICR 606

to top

>BIR_CHICK (Q90660) Inhibitor of apoptosis protein (IAP) (Inhibitor of T-cell|
           apoptosis protein)
          Length = 611

 Score = 33.5 bits (75), Expect = 0.30
 Identities = 16/43 (37%), Positives = 20/43 (46%)
 Frame = +2

Query: 128 SCAVCADALEWVAYGPCGHREVCSTCVVRLRFVLEDSLCCICK 256
           +C VC D    + + PCGH  VC  C   LR       C IC+
Sbjct: 563 TCKVCMDKEVSIVFIPCGHLVVCKECAPSLR------KCPICR 599

to top

>NEURL_MOUSE (Q923S6) Neuralized-like protein 1 (m-neuralized 1) (m-neu1)|
          Length = 574

 Score = 33.5 bits (75), Expect = 0.30
 Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
 Frame = +2

Query: 116 EMDDSCAVCAD-ALEWVAYGPCGHREVCSTCVVRLRFVLEDSLCCICKTDCPSVFVT 283
           +  D C +C + A++ V Y  CGH  +C +C +RL+  L  + C IC+     +  T
Sbjct: 516 QWSDECTICYEHAVDTVIY-TCGHMCLCYSCGLRLKKALH-ACCPICRRPIKDIIKT 570

to top

>MIB2_MOUSE (Q8R516) Ubiquitin ligase protein MIB2 (EC 6.3.2.-) (Mind bomb|
           homolog 2) (Mind bomb-2) (Skeletrophin) (Dystrophin-like
           protein) (Dyslike)
          Length = 973

 Score = 33.5 bits (75), Expect = 0.30
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +2

Query: 131 CAVCADALEWVAYGPCGHREVCSTCVVRLR 220
           C VC++    + + PC HR VC  C  R++
Sbjct: 850 CLVCSELALLILFSPCQHRTVCEECARRMK 879

to top

>BIRC2_MOUSE (Q62210) Baculoviral IAP repeat-containing protein 2 (Inhibitor of|
           apoptosis protein 2) (MIAP2) (MIAP-2)
          Length = 612

 Score = 33.5 bits (75), Expect = 0.30
 Identities = 16/43 (37%), Positives = 20/43 (46%)
 Frame = +2

Query: 128 SCAVCADALEWVAYGPCGHREVCSTCVVRLRFVLEDSLCCICK 256
           +C VC D    + + PCGH  VC  C   LR       C IC+
Sbjct: 564 TCKVCMDREVSIVFIPCGHLVVCQECAPSLR------KCPICR 600

to top

>PIAP_PIG (O62640) Putative inhibitor of apoptosis|
          Length = 358

 Score = 33.5 bits (75), Expect = 0.30
 Identities = 16/43 (37%), Positives = 20/43 (46%)
 Frame = +2

Query: 128 SCAVCADALEWVAYGPCGHREVCSTCVVRLRFVLEDSLCCICK 256
           +C VC D    + + PCGH  VC  C   LR       C IC+
Sbjct: 310 TCKVCMDKEVSIVFIPCGHLVVCKDCAPSLR------KCPICR 346

to top

>NEUL1_HUMAN (O76050) Neuralized-like protein 1 (h-neuralized 1) (h-neu) (RING|
           finger protein 67)
          Length = 574

 Score = 33.1 bits (74), Expect = 0.40
 Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = +2

Query: 116 EMDDSCAVCAD-ALEWVAYGPCGHREVCSTCVVRLRFVLEDSLCCICKTDCPSVFVT 283
           +  D C +C + A++ V Y  CGH  +C  C +RL+  L  + C IC+     +  T
Sbjct: 516 QWSDECTICYEHAVDTVIY-TCGHMCLCYACGLRLKKALH-ACCPICRRPIKDIIKT 570

to top

>BIRC3_MOUSE (O08863) Baculoviral IAP repeat-containing protein 3 (Inhibitor of|
           apoptosis protein 1) (MIAP1) (MIAP-1)
          Length = 600

 Score = 33.1 bits (74), Expect = 0.40
 Identities = 16/42 (38%), Positives = 19/42 (45%)
 Frame = +2

Query: 131 CAVCADALEWVAYGPCGHREVCSTCVVRLRFVLEDSLCCICK 256
           C VC D    + + PCGH  VC  C   LR       C IC+
Sbjct: 553 CKVCMDREVSIVFIPCGHLVVCKDCAPSLR------KCPICR 588

to top

>AMFR2_HUMAN (Q9UKV5) Autocrine motility factor receptor, isoform 2 (EC 6.3.2.-)|
           (AMF receptor) (gp78)
          Length = 643

 Score = 33.1 bits (74), Expect = 0.40
 Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
 Frame = +2

Query: 122 DDSCAVCADALEWVAYGPCGHREVCSTCVVRLRFVLE-DSLCCICKTDCPSVFVTKAMGD 298
           +D CA+C D+++     PCGH    ++C   LR  LE D+ C  C+         +   +
Sbjct: 338 NDDCAICWDSMQAARKLPCGHL-FHNSC---LRSWLEQDTSCPTCRMSLNIADNNRVREE 393

Query: 299 YTKVISDFSVLPTEASEG----NVGEYWYHED 382
           +     D +++P  A+EG    N   +++H D
Sbjct: 394 HQGENLDENLVPVAAAEGRPRLNQHNHFFHFD 425

to top

>SM3L2_ARATH (Q9FNI6) Putative SWI/SNF-related matrix-associated actin-dependent|
           regulator of chromatin subfamily A member 3-like 2 (EC
           3.6.1.-) (SMARCA3-like protein 2)
          Length = 1029

 Score = 32.3 bits (72), Expect = 0.67
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +2

Query: 131 CAVCADALEWVAYGPCGHREVCSTCVVRLRFVLEDSLCCICK 256
           C +C +ALE     PC HR +C  C++         LC +C+
Sbjct: 794 CPICLEALEDAVLTPCAHR-LCRECLLASWRNSTSGLCPVCR 834

to top

>BIRC7_HUMAN (Q96CA5) Baculoviral IAP repeat-containing protein 7 (Kidney|
           inhibitor of apoptosis protein) (KIAP) (Melanoma
           inhibitor of apoptosis protein) (ML-IAP) (Livin)
          Length = 298

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = +2

Query: 128 SCAVCADALEWVAYGPCGHREVCSTCVVRLRFVLEDSLCCICK 256
           +C VC D    + + PCGH  VC+ C   L+      LC IC+
Sbjct: 251 TCKVCLDRAVSIVFVPCGHL-VCAECAPGLQ------LCPICR 286

to top

>IAP2_DROME (Q24307) Apoptosis 2 inhibitor (Inhibitor of apoptosis 2) (dIAP2)|
           (DIAP) (IAP homolog A) (IAP-like protein) (DILP)
          Length = 498

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 14/44 (31%), Positives = 20/44 (45%)
 Frame = +2

Query: 131 CAVCADALEWVAYGPCGHREVCSTCVVRLRFVLEDSLCCICKTD 262
           C VC D    V + PCGH   C+ C   +      + C +C+ D
Sbjct: 451 CKVCLDEEVGVVFLPCGHLATCNQCAPSV------ANCPMCRAD 488

to top

>RNGB_DICDI (Q7M3S9) Ring finger protein B (Protein rngB)|
          Length = 943

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = +2

Query: 125  DSCAVCADALEWVAYGPCGHREVCSTCVVRLRFVLEDSLCCICKT 259
            +SC +CA     +   PC H  +CS C  +L      + C IC++
Sbjct: 895  NSCVICASNPPNIVLLPCRHSSLCSDCCSKL------TKCPICRS 933

to top

>RNF34_MOUSE (Q99KR6) RING finger protein 34 (RING finger protein RIFF)|
           (Phafin-1)
          Length = 376

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
 Frame = +2

Query: 116 EMDDS-CAVCADALEWVAYGPCGHREVCSTCVVRLRFVLEDSLCCICK 256
           E DDS C +C DA+       CGH   C+ C  R+      S C IC+
Sbjct: 323 EEDDSLCRICMDAVIDCVLLECGHMVTCTKCGKRM------SECPICR 364

to top

>RNF34_PONPY (Q5NVC7) RING finger protein 34|
          Length = 372

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
 Frame = +2

Query: 116 EMDDS-CAVCADALEWVAYGPCGHREVCSTCVVRLRFVLEDSLCCICK 256
           E DDS C +C DA+       CGH   C+ C  R+      S C IC+
Sbjct: 319 EEDDSLCRICMDAVIDCVLLECGHMVTCTKCGKRM------SECPICR 360

to top

>RNF34_HUMAN (Q969K3) RING finger protein 34 (RING finger protein RIFF)|
           (FYVE-RING finger protein Momo) (Human RING finger
           homologous to inhibitor of apoptosis protein) (hRFI)
           (Caspases-8 and -10-associated RING finger protein 1)
           (CARP-1) (Caspase regulat
          Length = 372

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
 Frame = +2

Query: 116 EMDDS-CAVCADALEWVAYGPCGHREVCSTCVVRLRFVLEDSLCCICK 256
           E DDS C +C DA+       CGH   C+ C  R+      S C IC+
Sbjct: 319 EEDDSLCRICMDAVIDCVLLECGHMVTCTKCGKRM------SECPICR 360

to top

>RNF34_BOVIN (Q5E9J6) RING finger protein 34|
          Length = 375

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
 Frame = +2

Query: 116 EMDDS-CAVCADALEWVAYGPCGHREVCSTCVVRLRFVLEDSLCCICK 256
           E DDS C +C DA+       CGH   C+ C  R+      S C IC+
Sbjct: 322 EEDDSLCRICMDAVIDCVLLECGHMVTCTKCGKRM------SECPICR 363

to top

>RNF34_RAT (Q6AYH3) RING finger protein 34 (RING finger protein MOMO)|
          Length = 381

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
 Frame = +2

Query: 116 EMDDS-CAVCADALEWVAYGPCGHREVCSTCVVRLRFVLEDSLCCICK 256
           E DDS C +C DA+       CGH   C+ C  R+      S C IC+
Sbjct: 328 EEDDSLCRICMDAVIDCVLLECGHMVTCTKCGKRM------SECPICR 369

to top

>MYLIP_BRARE (Q6TEM9) Ubiquitin ligase MYLIP (EC 6.3.2.-) (Myosin regulatory|
           light chain-interacting protein) (MIR)
          Length = 472

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 13/48 (27%), Positives = 22/48 (45%)
 Frame = +2

Query: 131 CAVCADALEWVAYGPCGHREVCSTCVVRLRFVLEDSLCCICKTDCPSV 274
           C +C +     A+ PCGH   C  C  +L+       C +C+++   V
Sbjct: 384 CMLCCEEEIDAAFCPCGHMVCCQNCAAQLQ------SCPVCRSEVEHV 425

to top

>TRAF6_HUMAN (Q9Y4K3) TNF receptor-associated factor 6 (Interleukin 1 signal|
           transducer) (RING finger protein 85)
          Length = 522

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +2

Query: 131 CAVCADALEWVAYGPCGHREVCSTCVVR 214
           C +C  AL      PCGHR  C  C+++
Sbjct: 70  CPICLMALREAVQTPCGHR-FCKACIIK 96

to top

>RFPL3_HUMAN (O75679) Ret finger protein-like 3|
          Length = 317

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 19/44 (43%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
 Frame = +2

Query: 128 SCAVCADALEWVAYGPCGHREVCSTCVVRLRFVL--EDSLCCIC 253
           SC VC+D LE      CG   VC  C+  L+     ED LCC C
Sbjct: 39  SCPVCSDYLEKPMSLECG-CTVCLKCINSLQKEPHGEDLLCCCC 81

to top

>RFPL1_HUMAN (O75677) Ret finger protein-like 1 (RING finger protein 78)|
          Length = 317

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 19/44 (43%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
 Frame = +2

Query: 128 SCAVCADALEWVAYGPCGHREVCSTCVVRLRFVL--EDSLCCIC 253
           SC VC+D LE      CG   VC  C+  L+     ED LCC C
Sbjct: 39  SCPVCSDYLEKPMSLECG-CAVCFKCINSLQKEPHGEDLLCCCC 81

to top

>MDM2_BRARE (O42354) Ubiquitin-protein ligase E3 Mdm2 (EC 6.3.2.-) (p53-binding|
           protein Mdm2) (Double minute 2 protein)
          Length = 445

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
 Frame = +2

Query: 125 DSCAVCADALE--WVAYGPCGHREVCSTCVVRLRFVLEDSLCCICKTDCPSVFVT 283
           + C +C    +   + +G  GH   C TC  +L+    + LC +C+    SV +T
Sbjct: 390 EPCVICQSRPKNGCIVHGRTGHLMACYTCAKKLK--NRNKLCPVCREPIQSVVLT 442

to top

>BIRC4_RAT (Q9R0I6) Baculoviral IAP repeat-containing protein 4 (Inhibitor of|
           apoptosis protein 3) (X-linked inhibitor of apoptosis
           protein) (X-linked IAP) (IAP homolog A) (RIAP3) (RIAP-3)
          Length = 496

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 14/51 (27%), Positives = 22/51 (43%)
 Frame = +2

Query: 131 CAVCADALEWVAYGPCGHREVCSTCVVRLRFVLEDSLCCICKTDCPSVFVT 283
           C +C D    + + PCGH   C  C      V +  +CC   T    +F++
Sbjct: 449 CKICMDRNIAIVFVPCGHLVTCKQCA---EAVDKCPMCCTVITFKQKIFMS 496

to top

>TRAF6_MOUSE (P70196) TNF receptor-associated factor 6|
          Length = 530

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +2

Query: 131 CAVCADALEWVAYGPCGHREVCSTCVVR 214
           C +C  AL      PCGHR  C  C+++
Sbjct: 70  CPICLMALREAVQTPCGHR-FCKACIIK 96

to top

>PZRN3_HUMAN (Q9UPQ7) PDZ domain-containing RING finger protein 3 (Ligand of|
           Numb-protein X 3) (Semaphorin cytoplasmic
           domain-associated protein 3) (SEMACAP3 protein)
          Length = 1066

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 28/122 (22%), Positives = 41/122 (33%), Gaps = 27/122 (22%)
 Frame = +2

Query: 122 DDSCAVCADALEWVAYGPCGHREVCSTCVVRLRFVLEDSLC------------------- 244
           D  CA+C   LE     PCGH   C+ CV  L +V+++  C                   
Sbjct: 15  DLKCALCHKVLEDPLTTPCGH-VFCAGCV--LPWVVQEGSCPARCRGRLSAKELNHVLPL 71

Query: 245 --CICKTDCPSVFVTKAMGDYTKV------ISDFSVLPTEASEGNVGEYWYHEDTKAYFD 400
              I K D    + T+  G   K+      +      P        G+     D +A+  
Sbjct: 72  KRLILKLDIKCAYATRGCGRVVKLQQLPEHLERCDFAPARCRHAGCGQVLLRRDVEAHMR 131

Query: 401 DA 406
           DA
Sbjct: 132 DA 133

to top

>TRI39_RAT (Q6MFZ5) Tripartite motif protein 39 (RING finger protein 23)|
          Length = 488

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = +2

Query: 116 EMDDSCAVCADALEWVAYGPCGHREVCSTCVVRLRFVLE-DSLCCICK 256
           +++ SC+VC + L+      CGH   C  C+ R    LE D  C +C+
Sbjct: 24  QVEASCSVCLEYLKEPVIIECGH-NFCKACITRWWEDLERDFPCPVCR 70

to top

>TRI39_MOUSE (Q9ESN2) Tripartite motif protein 39 (RING finger protein 23)|
           (Testis-abundant finger protein)
          Length = 488

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = +2

Query: 116 EMDDSCAVCADALEWVAYGPCGHREVCSTCVVRLRFVLE-DSLCCICK 256
           +++ SC+VC + L+      CGH   C  C+ R    LE D  C +C+
Sbjct: 24  QVEASCSVCLEYLKEPVIIECGH-NFCKACITRWWEDLERDFPCPVCR 70

to top

>TRI39_HUMAN (Q9HCM9) Tripartite motif protein 39 (RING finger protein 23)|
           (Testis-abundant finger protein)
          Length = 518

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = +2

Query: 116 EMDDSCAVCADALEWVAYGPCGHREVCSTCVVRLRFVLE-DSLCCICK 256
           +++ SC+VC + L+      CGH   C  C+ R    LE D  C +C+
Sbjct: 24  QVEASCSVCLEYLKEPVIIECGH-NFCKACITRWWEDLERDFPCPVCR 70

to top

>SPIKE_CVCAI (P36300) Spike glycoprotein precursor (Peplomer protein) (E2)|
          Length = 1451

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 7/75 (9%)
 Frame = +2

Query: 209 VRLRFVLEDSLCCICKTDCP---SVFVTK----AMGDYTKVISDFSVLPTEASEGNVGEY 367
           V+ R +L+  L CI K D     S  + +     +GD  K+   FSV+PT+      G  
Sbjct: 126 VQFRPLLKHGLLCITKNDTVDYNSFTINQWRDICLGDDRKI--PFSVVPTDNGTKLFGLE 183

Query: 368 WYHEDTKAYFDDADH 412
           W  +   AY  D  H
Sbjct: 184 WNDDYVTAYISDESH 198

to top

>IAP2_NPVOP (O10324) Probable apoptosis inhibitor 2 (IAP-2)|
          Length = 236

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = +2

Query: 131 CAVCADALEWVAYGPCGHREVCSTCVVRLRFVLEDSLCCIC 253
           C VC    + V + PC H  VC+ C  R +       CC+C
Sbjct: 189 CKVCFVNEKSVCFLPCRHLVVCAECSPRCK------RCCVC 223

to top

>SPL12_ARATH (Q9S7P5) Squamosa promoter-binding-like protein 12|
          Length = 927

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -3

Query: 463 FVTYTTRXSAHRPXHLIMIGIIKVCLCILMV 371
           FVT   +  A+RP  L M+ I  VC+C+ ++
Sbjct: 873 FVTTHHKSVAYRPAMLSMVAIAAVCVCVALL 903

to top

>ENAM_MOUSE (O55196) Enamelin precursor|
          Length = 1274

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -2

Query: 404  HHQSMPLYPHGTSTPPHFPHLPQWAKQRN 318
            H  ++P +P+ T++P  FP  P W +  N
Sbjct: 932  HKSNIPNHPYSTTSPARFPKDPTWFEGEN 960

to top

>NCOA6_MOUSE (Q9JL19) Nuclear receptor coactivator 6 (Amplified in breast cancer|
           protein 3) (Cancer-amplified transcriptional coactivator
           ASC-2) (Activating signal cointegrator 2) (ASC-2)
           (Peroxisome proliferator-activated receptor-interacting
           protein) (P
          Length = 2067

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 16/57 (28%), Positives = 26/57 (45%)
 Frame = -2

Query: 482 DQPDPQLCHIHYKXVGTSPXSSYNDRHHQSMPLYPHGTSTPPHFPHLPQWAKQRNRR 312
           D  DP L  +H +   + P  S    HH   P+  +    P +FP L Q  +Q+ ++
Sbjct: 215 DAMDPLLSGLHIQQQ-SHPSGSLPPAHHSMQPVPVNRQMNPANFPQLQQQQQQQQQQ 270

to top

>RPA1_RAT (O54889) DNA-directed RNA polymerase I largest subunit (EC 2.7.7.6)|
           (RNA polymerase I 194 kDa subunit) (RPA194)
          Length = 1716

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = +2

Query: 143 ADALEWVAYGPCGHREVCSTCV 208
           AD L  +A GP   +EVCSTCV
Sbjct: 47  ADGLYDLALGPADSKEVCSTCV 68

to top

>Y905_METJA (Q58315) Hypothetical protein MJ0905|
          Length = 111

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
 Frame = -3

Query: 361 PHISLTCLSGQNREIGDHFCVISHGL--CDEYGGA--IRLTDAA*RVLE 227
           P   L CL G N     HF +I  GL  C E GG    +LTD   +++E
Sbjct: 48  PSNVLGCLKGMNGRYNGHFSLIELGLVECVERGGVKIYKLTDYGKKIVE 96

to top

>TRI34_MOUSE (Q99PP6) Tripartite motif protein 34|
          Length = 485

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 4/48 (8%)
 Frame = +2

Query: 128 SCAVCADALEWVAYGPCGHREVCSTCVVRLRFVL----EDSLCCICKT 259
           +C VC + L       CGHR VC  C++  +  +    E S C +C T
Sbjct: 14  TCPVCQELLTKALSLGCGHR-VCQACLITKKNAVINPREKSSCPVCGT 60

to top

>KTR2_YEAST (P33550) Probable mannosyltransferase KTR2 (EC 2.4.1.131)|
          Length = 425

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 5/48 (10%)
 Frame = -1

Query: 402 SSKYAFVSSWYQYSPTFPSL-----ASVGKTEKSEITFV*SPMAFVTN 274
           + KY FV + Y+Y  T PSL       + +TE ++I    +   FV+N
Sbjct: 239 NKKYGFVITMYEYEDTIPSLWEAVEEYLEETESADIDMESNAFGFVSN 286

to top

>RAD18_CANGA (Q6FPI4) Postreplication repair ubiquitin-protein ligase E3 RAD18|
           (EC 6.-.-.-)
          Length = 411

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
 Frame = +2

Query: 116 EMDD--SCAVCADALEWVAYGPCGHREVCSTCVVRLRFVLEDSLCCIC 253
           E+DD   C +C D L+     PCGH   CS C+    ++  +  C +C
Sbjct: 20  ELDDLLRCHICKDFLKNPVLTPCGH-TFCSLCI--RGYLSNEPKCPLC 64

to top

>SPYA_FELCA (P41689) Serine--pyruvate aminotransferase, mitochondrial precursor|
           (EC 2.6.1.51) (SPT) (Alanine--glyoxylate
           aminotransferase) (EC 2.6.1.44) (AGT)
          Length = 414

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +3

Query: 300 TQK*SPISLFCPLRQVREMWGSTGTMRIQRHT 395
           T+K  P+S +  ++ +  +WG  G  RI  HT
Sbjct: 254 TRKTKPVSFYLDMKWLANIWGCDGKPRIYHHT 285

to top

>NCOA6_HUMAN (Q14686) Nuclear receptor coactivator 6 (Amplified in breast cancer|
           protein 3) (Cancer-amplified transcriptional coactivator
           ASC-2) (Activating signal cointegrator 2) (ASC-2)
           (Peroxisome proliferator-activated receptor-interacting
           protein) (P
          Length = 2063

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 16/57 (28%), Positives = 26/57 (45%)
 Frame = -2

Query: 482 DQPDPQLCHIHYKXVGTSPXSSYNDRHHQSMPLYPHGTSTPPHFPHLPQWAKQRNRR 312
           D  DP L  +H +   + P  S    HH   P+  +    P +FP L Q  +Q+ ++
Sbjct: 215 DAMDPLLSGLHIQQQ-SHPSGSLAPPHHPMQPVSVNRQMNPANFPQLQQQQQQQQQQ 270

to top

>BIRC8_HUMAN (Q96P09) Baculoviral IAP repeat-containing protein 8 (Inhibitor of|
           apoptosis-like protein 2) (IAP-like protein 2) (ILP-2)
           (Testis-specific inhibitor of apoptosis)
          Length = 236

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = +2

Query: 131 CAVCADALEWVAYGPCGHREVCSTC 205
           C +C D    V + PCGH   C  C
Sbjct: 189 CKICMDRYIAVVFIPCGHLVTCKQC 213

to top

>SPIKE_CVCAE (Q65984) Spike glycoprotein precursor (Peplomer protein) (E2)|
          Length = 1453

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 7/76 (9%)
 Frame = +2

Query: 209 VRLRFVLEDSLCCICK-------TDCPSVFVTKAMGDYTKVISDFSVLPTEASEGNVGEY 367
           V+ R +L+  L CI K       T   + +    +GD  K+   FSV+PT+      G  
Sbjct: 126 VQPRPLLKHGLLCITKNKIIDYNTFTSAQWSAICLGDDRKI--PFSVIPTDNGTKIFGLE 183

Query: 368 WYHEDTKAYFDDADHY 415
           W  +   AY  D  H+
Sbjct: 184 WNDDYVTAYISDRSHH 199

to top

>YB1B_SCHPO (P87176) Hypothetical RING finger protein C3D6.11c in chromosome II|
          Length = 269

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
 Frame = +2

Query: 122 DDSCAVCADALEWVAYGPCGHREVCSTCVV-RLRFVLEDSLCCICK 256
           D  C +C D+ E ++  PCGH   C+ C++  L        C +C+
Sbjct: 203 DYKCVICLDSPENLSCTPCGH-IFCNFCILSALGTTAATQKCPVCR 247

to top

>SPL1_ARATH (Q9SMX9) Squamosa promoter-binding-like protein 1|
          Length = 881

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = -3

Query: 451 TTRXSAHRPXHLIMIGIIKVCLCILMV 371
           T R  A+RP  L M+ I  VC+C+ ++
Sbjct: 831 TRRSVAYRPAMLSMVAIAAVCVCVALL 857

to top

>MYLIP_HUMAN (Q8WY64) Ubiquitin ligase MYLIP (EC 6.3.2.-) (Myosin regulatory|
           light chain-interacting protein) (MIR)
          Length = 445

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 12/43 (27%), Positives = 20/43 (46%)
 Frame = +2

Query: 131 CAVCADALEWVAYGPCGHREVCSTCVVRLRFVLEDSLCCICKT 259
           C VC +      + PCGH   C +C  +L+       C +C++
Sbjct: 387 CMVCCEEEINSTFCPCGHTVCCESCAAQLQ------SCPVCRS 423

to top

>SPYA_RAT (P09139) Serine--pyruvate aminotransferase, mitochondrial precursor|
           (EC 2.6.1.51) (SPT) (Alanine--glyoxylate
           aminotransferase) (EC 2.6.1.44) (AGT)
          Length = 414

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = +3

Query: 300 TQK*SPISLFCPLRQVREMWGSTGTMRIQRHTLMMPII 413
           ++K  P+S +  +  + ++WG  G  R+  HTL  P+I
Sbjct: 254 SRKTKPVSFYTDITYLSKLWGCEGKTRVIHHTL--PVI 289

to top

>SM3L3_ARATH (Q9FIY7) Putative SWI/SNF-related matrix-associated actin-dependent|
            regulator of chromatin subfamily A member 3-like 3 (EC
            3.6.1.-) (SMARCA3-like protein 3)
          Length = 1277

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = +2

Query: 131  CAVCADALEWVAYGPCGHREVCSTCVVRLRFVLEDSLCCICKT 259
            C +C ++ +     PC HR +C  C++         LC IC+T
Sbjct: 1040 CPICLESADDPVLTPCAHR-MCRECLLTSWRSPSCGLCPICRT 1081

to top

>NEK3_MOUSE (Q9R0A5) Serine/threonine-protein kinase Nek3 (EC 2.7.11.1)|
           (NimA-related protein kinase 3)
          Length = 511

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 14/48 (29%), Positives = 21/48 (43%), Gaps = 4/48 (8%)
 Frame = -2

Query: 458 HIHYKXVGTSPXSSYNDRHHQSMP----LYPHGTSTPPHFPHLPQWAK 327
           H   +  GT+P  +   R  +  P       HG+ T P  PH P+W +
Sbjct: 318 HTELESTGTTPAGNALGRAARGNPESGNRQEHGSHTSPASPHRPRWER 365

to top

>RAD18_ASHGO (Q75EN0) Postreplication repair ubiquitin-protein ligase E3 RAD18|
           (EC 6.-.-.-)
          Length = 443

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = +2

Query: 131 CAVCADALEWVAYGPCGHREVCSTCVVRLRFVLEDSLCCIC 253
           C +C D L+      CGH   CS C+    ++ ++S C +C
Sbjct: 32  CHICKDMLQTPVLTQCGH-TFCSLCI--REYLNKESRCPLC 69

to top

>CBLC_HUMAN (Q9ULV8) Signal transduction protein CBL-C (SH3-binding protein|
           CBL-C) (CBL-3) (RING finger protein 57)
          Length = 474

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 13/44 (29%), Positives = 23/44 (52%)
 Frame = +2

Query: 131 CAVCADALEWVAYGPCGHREVCSTCVVRLRFVLEDSLCCICKTD 262
           C +CA++ + V   PCGH  +CS C+   +   +   C  C+ +
Sbjct: 351 CKICAESNKDVKIEPCGHL-LCSCCLAAWQH-SDSQTCPFCRCE 392

to top

>YUES_CAEEL (P90859) Hypothetical RING finger protein F26E4.11 in chromosome I|
          Length = 564

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 17/53 (32%), Positives = 25/53 (47%)
 Frame = +2

Query: 113 AEMDDSCAVCADALEWVAYGPCGHREVCSTCVVRLRFVLEDSLCCICKTDCPS 271
           A  DD C VC + L      PC H +    C+  + ++ +DS C  C+   PS
Sbjct: 329 ANGDDRCVVCWELLGTSRRLPCSH-QFHDWCL--MWWLAQDSSCPTCRCTIPS 378

to top

>SSY1_YEAST (Q03770) Putative amino-acid permease SSY1|
          Length = 852

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 14/21 (66%), Positives = 16/21 (76%)
 Frame = +3

Query: 210 SAFASYSRTLYAASVRRIAPP 272
           S+  S SRTLYA SV+R APP
Sbjct: 645 SSLFSCSRTLYAMSVQRKAPP 665

to top

>PZRN3_RAT (P68907) PDZ domain-containing RING finger protein 3 (Semaphorin|
           cytoplasmic domain-associated protein 3) (SEMACAP3
           protein)
          Length = 1062

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = +2

Query: 122 DDSCAVCADALEWVAYGPCGHREVCSTCVVRLRFVLEDSLC 244
           D  CA+C   LE     PCGH   C+ CV  L +V+++  C
Sbjct: 15  DLKCALCHKVLEDPLTTPCGH-VFCAGCV--LPWVVQEGSC 52

to top

>PZRN3_MOUSE (Q69ZS0) PDZ domain-containing RING finger protein 3 (Semaphorin|
           cytoplasmic domain-associated protein 3) (SEMACAP3
           protein)
          Length = 1063

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = +2

Query: 122 DDSCAVCADALEWVAYGPCGHREVCSTCVVRLRFVLEDSLC 244
           D  CA+C   LE     PCGH   C+ CV  L +V+++  C
Sbjct: 15  DLKCALCHKVLEDPLTTPCGH-VFCAGCV--LPWVVQEGSC 52

to top

>YJG4_YEAST (P47038) Hypothetical 13.9 kDa protein in SMC3-MRPL8 intergenic|
           region
          Length = 131

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 18/90 (20%), Positives = 31/90 (34%), Gaps = 9/90 (10%)
 Frame = +2

Query: 125 DSCAVCADALEWVAYGPCGHREVCSTCVVRLRFVLEDSLCCICKTDCPSVF--------- 277
           + C + A+   + +    G    C  C            CC+C+  C S +         
Sbjct: 34  EECTIAAEMSSYDSVSSSGSGGTCCCCCC----------CCLCRDSCVSTWTKNSVANAV 83

Query: 278 VTKAMGDYTKVISDFSVLPTEASEGNVGEY 367
            T A  + +     F  +    S GN+GE+
Sbjct: 84  ATNASSEVSIYSGSFLAILCTFSTGNLGEH 113


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,946,226
Number of Sequences: 219361
Number of extensions: 1204009
Number of successful extensions: 3614
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 3481
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3611
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3304846491
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

to top

full-length cDNA and EST

Clone Information

BLAST Search Result