ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bastl13a07 |
|---|---|
| Clone Library Name | barley_pub |
>PO6F2_HUMAN (P78424) POU domain, class 6, transcription factor 2| (Retina-derived POU-domain factor 1) (RPF-1) Length = 684 Score = 32.0 bits (71), Expect = 0.36 Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 4/55 (7%) Frame = +2 Query: 104 PSATN----PRPARGTRINQFHSQLCPRRLSPVATKQPPAPCRALPWRPELRTHQ 256 P +TN P P ++ Q Q P + P A++QPPAP L P+ + HQ Sbjct: 191 PPSTNQHPQPAPQAPSQSQQQPLQPTPPQQPPPASQQPPAPTSQLQQAPQPQQHQ 245
>RUSC2_MOUSE (Q80U22) RUN and SH3 domain-containing protein 2| Length = 1514 Score = 31.6 bits (70), Expect = 0.47 Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 2/57 (3%) Frame = +2 Query: 107 SATNPRPARGTRINQFH--SQLCPRRLSPVATKQPPAPCRALPWRPELRTHQCSGQP 271 ++ +P P +GT + S CP + P ++QPP + +P E R H P Sbjct: 794 TSCSPPPEQGTAADSVSPWSHTCPPTVRPATSQQPPKEDQKIPTLAEYRLHGTGSLP 850
>LTBP2_HUMAN (Q14767) Latent transforming growth factor beta-binding protein 2| precursor (LTBP-2) Length = 1821 Score = 30.4 bits (67), Expect = 1.0 Identities = 17/48 (35%), Positives = 23/48 (47%) Frame = +2 Query: 122 RPARGTRINQFHSQLCPRRLSPVATKQPPAPCRALPWRPELRTHQCSG 265 RP+R + + RR +P+ +QP RA P P L T Q SG Sbjct: 105 RPSRAQQSRRVQPPAQTRRSTPLGQQQPAPRTRAAPALPRLGTPQRSG 152
>BSN_HUMAN (Q9UPA5) Bassoon protein (Zinc-finger protein 231)| Length = 3925 Score = 30.0 bits (66), Expect = 1.4 Identities = 18/55 (32%), Positives = 26/55 (47%) Frame = +2 Query: 107 SATNPRPARGTRINQFHSQLCPRRLSPVATKQPPAPCRALPWRPELRTHQCSGQP 271 S T+P +G + S P + SP++TK P P +A P LR + S P Sbjct: 547 SGTSPLKQKGPQGLGQPSGPLPAKASPLSTKASPLPSKASPQAKPLRASEPSKTP 601
>Y007_MYCTU (P71575) Hypothetical protein Rv0007/MT0007| Length = 304 Score = 29.6 bits (65), Expect = 1.8 Identities = 18/60 (30%), Positives = 25/60 (41%) Frame = +2 Query: 35 WRQAPHEKAQRGSVVSSPVHAG*PSATNPRPARGTRINQFHSQLCPRRLSPVATKQPPAP 214 W++A ++Q G PV TNP A R+N+F S P A + P P Sbjct: 46 WQRAATRQSQAGHRQPPPVSHPEGRPTNPPAAADARLNRFISGASAPVTGPAAAVRTPQP 105
>MDH_HALMA (Q07841) Malate dehydrogenase (EC 1.1.1.37)| Length = 304 Score = 29.3 bits (64), Expect = 2.3 Identities = 14/38 (36%), Positives = 20/38 (52%) Frame = -1 Query: 287 VELDGEVDHCIGGCGAPVATGAHGTERVAASWQLDSVD 174 V+L+GE H G PV G++G E + W LD + Sbjct: 249 VKLEGEFGHEDTAFGVPVRLGSNGVEEI-VEWDLDDYE 285
>FA7_RABIT (P98139) Coagulation factor VII precursor (EC 3.4.21.21) (Serum| prothrombin conversion accelerator) [Contains: Factor VII light chain; Factor VII heavy chain] Length = 444 Score = 29.3 bits (64), Expect = 2.3 Identities = 13/23 (56%), Positives = 13/23 (56%) Frame = -1 Query: 281 LDGEVDHCIGGCGAPVATGAHGT 213 LDG D C G G P AT HGT Sbjct: 372 LDGSKDACKGDSGGPHATSYHGT 394
>IF2_ZYMMO (Q5NQ27) Translation initiation factor IF-2| Length = 989 Score = 29.3 bits (64), Expect = 2.3 Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 1/58 (1%) Frame = +2 Query: 53 EKAQRGSVVSSPVHAG*PS-ATNPRPARGTRINQFHSQLCPRRLSPVATKQPPAPCRA 223 + A + V++P A P+ A P+P Q S+ P PVA K+ AP A Sbjct: 82 QTATKNETVATPAAAPAPAPAAAPKPVAAEATAQETSKAAPAAAQPVAEKEAAAPASA 139
>HXC5_MOUSE (P32043) Homeobox protein Hox-C5 (Hox-3.4) (Hox-6.2)| Length = 222 Score = 28.9 bits (63), Expect = 3.0 Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 3/69 (4%) Frame = +2 Query: 80 SSPVHAG*PSATNPRPARGTRINQFHS--QLCPRRLSPVATKQPPAPCRALPWRPELR-T 250 ++P++ G S RPA R + +R P QPPAP + PW +L + Sbjct: 91 AAPLNPGMYSQKAARPALEERAKSSGEIKEEQAQRGQPAGLSQPPAPPQIYPWMTKLHMS 150 Query: 251 HQCSGQPRR 277 H+ G+ R Sbjct: 151 HETDGKRSR 159
>ADCY3_RAT (P21932) Adenylate cyclase type 3 (EC 4.6.1.1) (Adenylate cyclase| type III) (Adenylate cyclase, olfactive type) (ATP pyrophosphate-lyase 3) (Adenylyl cyclase 3) (AC-III) (AC3) Length = 1144 Score = 28.9 bits (63), Expect = 3.0 Identities = 10/26 (38%), Positives = 16/26 (61%) Frame = -2 Query: 232 PRERTARSGWLLRGNWTQSTWAKLRV 155 P++ A S W+ R W ++TWA L + Sbjct: 686 PKKLVAFSSWIDRTRWARNTWAMLAI 711
>ADCY3_MOUSE (Q8VHH7) Adenylate cyclase type 3 (EC 4.6.1.1) (Adenylate cyclase| type III) (Adenylate cyclase, olfactive type) (ATP pyrophosphate-lyase 3) (Adenylyl cyclase 3) (AC-III) (AC3) Length = 1145 Score = 28.9 bits (63), Expect = 3.0 Identities = 10/26 (38%), Positives = 16/26 (61%) Frame = -2 Query: 232 PRERTARSGWLLRGNWTQSTWAKLRV 155 P++ A S W+ R W ++TWA L + Sbjct: 687 PKKLVAFSSWIDRTRWARNTWAMLAI 712
>KR103_HUMAN (P60369) Keratin-associated protein 10-3 (Keratin-associated| protein 10.3) (High sulfur keratin-associated protein 10.3) (Keratin-associated protein 18-3) (Keratin-associated protein 18.3) Length = 221 Score = 28.9 bits (63), Expect = 3.0 Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 4/52 (7%) Frame = +1 Query: 109 CHQPPSCSRDAHQPVP---LAALPTSTESS-CHEAATRSVPCAPVATGAPHP 252 C +PP C+ P P L P S SS C +AA PC T + P Sbjct: 26 CCEPPCCAPSCCAPAPCLTLVCTPVSCVSSPCCQAACEPSPCQSGCTSSCTP 77
>SWR1_NEUCR (Q7S133) Helicase swr-1 (EC 3.6.1.-)| Length = 1845 Score = 28.5 bits (62), Expect = 4.0 Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 3/79 (3%) Frame = +2 Query: 53 EKAQRGSVVSSPVHAG*PSATNPRPARGTRINQFHSQLCPRRLSPVATKQPPAPCRALPW 232 +K R ++ +SPV ++T+ +PA + N H+ P ++ P PP P +A P Sbjct: 210 KKVTRKAIQTSPVSNKSSASTSRKPAPASSSNSKHA---PAKMPP-----PPPPPKA-PA 260 Query: 233 RPELRTHQ---CSGQPRRR 280 R TH+ + + RRR Sbjct: 261 RKSATTHETRPSASRSRRR 279
>KRA95_HUMAN (Q9BYQ1) Keratin-associated protein 9-5 (Keratin-associated protein| 9.5) (Ultrahigh sulfur keratin-associated protein 9.5) (Fragment) Length = 111 Score = 28.5 bits (62), Expect = 4.0 Identities = 15/48 (31%), Positives = 22/48 (45%) Frame = +1 Query: 88 RPRRIALCHQPPSCSRDAHQPVPLAALPTSTESSCHEAATRSVPCAPV 231 +P + C QP CS QP+ ++SC + +S CAPV Sbjct: 5 QPTCLTSCCQPSCCSTTCCQPI-CCGSSCCGQTSCGSSCGQSSSCAPV 51
>CD248_MOUSE (Q91V98) Endosialin precursor (Tumor endothelial marker 1) (CD248| antigen) Length = 765 Score = 28.5 bits (62), Expect = 4.0 Identities = 17/49 (34%), Positives = 22/49 (44%) Frame = +1 Query: 115 QPPSCSRDAHQPVPLAALPTSTESSCHEAATRSVPCAPVATGAPHPPMQ 261 Q P S A QP LPT++ SS HE + P +P PP + Sbjct: 589 QAPQLSVSALQP----PLPTNSRSSVHETPVPAANQPPAFPSSPLPPQR 633
>AFF1_MOUSE (O88573) AF4/FMR2 family member 1 (AF-4 protein) (Proto-oncogene| AF4) Length = 1217 Score = 28.1 bits (61), Expect = 5.2 Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 8/63 (12%) Frame = +2 Query: 104 PSATNPRPARGTRINQFHSQLCPRRLSPV--ATKQPPAP------CRALPWRPELRTHQC 259 PS T+P P +GT + + QL S AT++PP+P + LP P H Sbjct: 394 PSKTHPNPQQGTSMLEDDLQLSDSEDSDTEQATEKPPSPPAPPSAPQTLP-EPVASAHSS 452 Query: 260 SGQ 268 SG+ Sbjct: 453 SGE 455
>CATEB_XENLA (Q805F2) Cathepsin E-B precursor (EC 3.4.23.34)| Length = 397 Score = 28.1 bits (61), Expect = 5.2 Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%) Frame = -1 Query: 287 VELDGEVDHCIGGCGAPVATGAHG-TERVAASWQLDSVDVGKAASG 153 ++++GEV C GGC A V TG T + QL S+ AA+G Sbjct: 259 IQINGEVVFCSGGCQAIVDTGTSMITGPSSDIVQLQSIIGASAANG 304
>FOXO1_HUMAN (Q12778) Forkhead box protein O1A (Forkhead in rhabdomyosarcoma)| Length = 655 Score = 28.1 bits (61), Expect = 5.2 Identities = 27/87 (31%), Positives = 33/87 (37%), Gaps = 3/87 (3%) Frame = +2 Query: 41 QAPHEKAQRGSVVSSPVHAG*PSATNPRPARGTRINQFHSQLCPRRLSPVATKQP---PA 211 QA H K S + P HA SA N RP T H+ RL+ V T P Sbjct: 510 QASHNKMMNPSSHTHPGHAQQTSAVNGRPLPHTVSTMPHTS-GMNRLTQVKTPVQVPLPH 568 Query: 212 PCRALPWRPELRTHQCSGQPRRRVLHQ 292 P + C+G R +LHQ Sbjct: 569 PMQMSALGGYSSVSSCNGYGRMGLLHQ 595
>ADCY3_HUMAN (O60266) Adenylate cyclase type 3 (EC 4.6.1.1) (Adenylate cyclase| type III) (Adenylate cyclase, olfactive type) (ATP pyrophosphate-lyase 3) (Adenylyl cyclase 3) (AC-III) (AC3) Length = 1144 Score = 28.1 bits (61), Expect = 5.2 Identities = 10/26 (38%), Positives = 16/26 (61%) Frame = -2 Query: 232 PRERTARSGWLLRGNWTQSTWAKLRV 155 P++ A S W+ R W ++TWA L + Sbjct: 688 PKKLVAFSTWIDRTRWARNTWAMLAI 713
>HXC5_HUMAN (Q00444) Homeobox protein Hox-C5 (Hox-3D) (CP11)| Length = 222 Score = 27.7 bits (60), Expect = 6.8 Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%) Frame = +2 Query: 185 PVATKQPPAPCRALPWRPELR-THQCSGQPRR 277 P QPPAP + PW +L +H+ G+ R Sbjct: 128 PAGLSQPPAPPQIYPWMTKLHMSHETDGKRSR 159
>ZO3_HUMAN (O95049) Tight junction protein ZO-3 (Zonula occludens 3 protein)| (Zona occludens 3 protein) (Tight junction protein 3) Length = 933 Score = 27.7 bits (60), Expect = 6.8 Identities = 15/41 (36%), Positives = 20/41 (48%) Frame = +3 Query: 201 SHPLRAVRSRGDRSSAPTNAVVNLAVEFYTNPLSHLPPQLR 323 S PL + D S+P + +LA E P SH+PP R Sbjct: 288 SSPLEEGVTMADEMSSPPADISDLASELSQAPPSHIPPPPR 328
>POLN_BFV (P87515) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)| [Contains: P123; P123'; mRNA capping enzyme nsP1 (EC 2.1.1.-) (EC 2.7.7.-) (Nonstructural protein 1); Protease/triphosphatase/NTPase/helicase nsP2 (EC 3.4.22.-) (EC 3.1.3.33) (EC 3 Length = 2410 Score = 27.7 bits (60), Expect = 6.8 Identities = 16/29 (55%), Positives = 19/29 (65%) Frame = +3 Query: 189 LPRSSHPLRAVRSRGDRSSAPTNAVVNLA 275 LP S P V+ RGD S+AP +AVVN A Sbjct: 1327 LPAGSAPAYRVK-RGDISNAPEDAVVNAA 1354
>IF2_AGRT5 (Q8UJ51) Translation initiation factor IF-2| Length = 913 Score = 27.7 bits (60), Expect = 6.8 Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 2/32 (6%) Frame = +2 Query: 188 VATKQP--PAPCRALPWRPELRTHQCSGQPRR 277 VA +P PAP A P P+ R HQ GQ +R Sbjct: 64 VAAPKPAAPAPVAARPQAPQPRIHQPGGQQQR 95
>GDF1_HUMAN (P27539) Embryonic growth/differentiation factor 1 precursor| (GDF-1) Length = 372 Score = 27.7 bits (60), Expect = 6.8 Identities = 22/67 (32%), Positives = 27/67 (40%), Gaps = 4/67 (5%) Frame = +1 Query: 58 GPAWQRRL-FPRPRRIALC---HQPPSCSRDAHQPVPLAALPTSTESSCHEAATRSVPCA 225 G AW R +PR R+AL P +C+R A + L L CH A Sbjct: 200 GAAWARNASWPRSLRLALALRPRAPAACARLAEASLLLVTLDPRL---CHPLARPRRDAE 256 Query: 226 PVATGAP 246 PV G P Sbjct: 257 PVLGGGP 263
>KRA92_HUMAN (Q9BYQ4) Keratin-associated protein 9-2 (Keratin-associated protein| 9.2) (Ultrahigh sulfur keratin-associated protein 9.2) Length = 174 Score = 27.7 bits (60), Expect = 6.8 Identities = 15/48 (31%), Positives = 21/48 (43%) Frame = +1 Query: 88 RPRRIALCHQPPSCSRDAHQPVPLAALPTSTESSCHEAATRSVPCAPV 231 +P + C QP CS QP ++SC + +S CAPV Sbjct: 68 QPTCVTSCCQPSCCSTPCCQPT-CCGSSCCGQTSCGSSCGQSSSCAPV 114
>TMM28_HUMAN (O75949) Transmembrane protein 28 (TED protein)| Length = 473 Score = 27.3 bits (59), Expect = 8.8 Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 16/72 (22%) Frame = +1 Query: 85 PRPRRIALCHQPPSCSRDAHQPVPLAAL----------PTSTESSC---HEAATRSVPCA 225 PR R ++ +PP + QPVP A+ P++ +C + T++ P A Sbjct: 69 PRARELSSAMRPPWGAGRERQPVPPRAVLPVPPPPPGEPSAPPGTCGPRYSNLTKAAPAA 128 Query: 226 ---PVATGAPHP 252 PV G P P Sbjct: 129 GSRPVCGGVPEP 140
>TENS1_BOVIN (Q9GLM4) Tensin-1| Length = 1715 Score = 27.3 bits (59), Expect = 8.8 Identities = 20/79 (25%), Positives = 29/79 (36%) Frame = +2 Query: 41 QAPHEKAQRGSVVSSPVHAG*PSATNPRPARGTRINQFHSQLCPRRLSPVATKQPPAPCR 220 +AP E G S + P+ N + S P S V +QPPA Sbjct: 784 RAPLESVPTGRPYSPYDYQPCPTGPNQSYHPKSPATSSSSSFLPTTQSSVGPQQPPASLP 843 Query: 221 ALPWRPELRTHQCSGQPRR 277 L +P+L + + P R Sbjct: 844 GLTTQPQLPPKEVTSDPSR 862
>PO6F2_MOUSE (Q8BJI4) POU domain, class 6, transcription factor 2| Length = 691 Score = 27.3 bits (59), Expect = 8.8 Identities = 18/63 (28%), Positives = 29/63 (46%) Frame = +2 Query: 104 PSATNPRPARGTRINQFHSQLCPRRLSPVATKQPPAPCRALPWRPELRTHQCSGQPRRRV 283 P++ +P+PA SQ P P A++Q PAP L + + HQ P+ + Sbjct: 203 PTSQHPQPASQAPPQ---SQPTPPHQPPPASQQLPAPPAQLEQATQPQQHQPHSHPQNQT 259 Query: 284 LHQ 292 +Q Sbjct: 260 QNQ 262
>FA7_RAT (Q8K3U6) Coagulation factor VII precursor (EC 3.4.21.21) (Serum| prothrombin conversion accelerator) [Contains: Factor VII light chain; Factor VII heavy chain] Length = 446 Score = 27.3 bits (59), Expect = 8.8 Identities = 12/23 (52%), Positives = 13/23 (56%) Frame = -1 Query: 281 LDGEVDHCIGGCGAPVATGAHGT 213 +DG D C G G P AT HGT Sbjct: 374 MDGTKDACKGDSGGPHATHYHGT 396
>FA7_MOUSE (P70375) Coagulation factor VII precursor (EC 3.4.21.21) (Serum| prothrombin conversion accelerator) [Contains: Factor VII light chain; Factor VII heavy chain] Length = 446 Score = 27.3 bits (59), Expect = 8.8 Identities = 12/23 (52%), Positives = 13/23 (56%) Frame = -1 Query: 281 LDGEVDHCIGGCGAPVATGAHGT 213 +DG D C G G P AT HGT Sbjct: 374 MDGTKDACKGDSGGPHATHYHGT 396
>DHSX_YEAST (P47052) Probable succinate dehydrogenase [ubiquinone] flavoprotein| subunit 2, mitochondrial precursor (EC 1.3.5.1) (FP) (Flavoprotein subunit of complex II) Length = 634 Score = 27.3 bits (59), Expect = 8.8 Identities = 12/33 (36%), Positives = 16/33 (48%) Frame = -1 Query: 248 CGAPVATGAHGTERVAASWQLDSVDVGKAASGT 150 CG HG R+ A+ LD V G+A + T Sbjct: 425 CGEAACVSVHGANRLGANSLLDLVVFGRAVANT 457
>SYN1_RAT (P09951) Synapsin-1 (Synapsin I)| Length = 704 Score = 27.3 bits (59), Expect = 8.8 Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 1/36 (2%) Frame = +1 Query: 148 PVPLAALPTSTESSCHEAATRSVPCAPVAT-GAPHP 252 P P AA P +T S +A R+ APVA+ AP P Sbjct: 33 PPPSAASPGATPGSAAASAERASTAAPVASPAAPSP 68
>GAG_AVISY (P03327) Gag polyprotein [Contains: Core protein p19; Core protein| p10] Length = 284 Score = 27.3 bits (59), Expect = 8.8 Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 1/42 (2%) Frame = +1 Query: 133 RDAHQPVPLAALPTSTESSCHEAATRS-VPCAPVATGAPHPP 255 RDA A P + +SC+ T S CA AP PP Sbjct: 135 RDAKMAPEETATPKTVGTSCYHCGTASGCNCATATASAPPPP 176
>CJ095_HUMAN (Q9H7T3) Protein C10orf95| Length = 257 Score = 27.3 bits (59), Expect = 8.8 Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 5/50 (10%) Frame = +1 Query: 58 GPAWQRRLFPRPRRIALCHQPPSCS-----RDAHQPVPLAALPTSTESSC 192 G AW R P LC SC+ R A P P A P++ SSC Sbjct: 170 GAAWSARGAP------LCSYRTSCAGSCGARTAPTPAPTCASPSAAASSC 213
>CYCR_RHOGE (P51758) Photosynthetic reaction center cytochrome c subunit| precursor Length = 366 Score = 27.3 bits (59), Expect = 8.8 Identities = 13/33 (39%), Positives = 20/33 (60%) Frame = +1 Query: 145 QPVPLAALPTSTESSCHEAATRSVPCAPVATGA 243 +P P AA ++ E++ +AA + P A VAT A Sbjct: 333 KPAPAAAAASAVEAAPVDAAASAAPVATVATAA 365
>NADB_RHILO (Q98AV8) L-aspartate oxidase (EC 1.4.3.16) (LASPO) (Quinolinate| synthetase B) Length = 513 Score = 27.3 bits (59), Expect = 8.8 Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 8/70 (11%) Frame = -1 Query: 290 GVELDGEVDHCIGG---CGAPVATGAHGTERVAASWQLDSVD----VGKAASGTG*CASL 132 GV +D E + G CG TG HG R+A++ ++V V ++ +GT Sbjct: 342 GVAVDAEGRTSVSGLWACGEVACTGLHGANRLASNSLTEAVATAAWVAESVAGT------ 395 Query: 131 EQDGGW-WQR 105 GW W R Sbjct: 396 --SAGWQWPR 403
>CATEA_XENLA (Q805F3) Cathepsin E-A precursor (EC 3.4.23.34)| Length = 397 Score = 27.3 bits (59), Expect = 8.8 Identities = 12/21 (57%), Positives = 15/21 (71%) Frame = -1 Query: 287 VELDGEVDHCIGGCGAPVATG 225 V+++GEV C GGC A V TG Sbjct: 259 VQINGEVLFCSGGCQAIVDTG 279
>ZIPA_ECO57 (Q8X492) Cell division protein zipA homolog| Length = 328 Score = 27.3 bits (59), Expect = 8.8 Identities = 18/58 (31%), Positives = 24/58 (41%) Frame = +2 Query: 41 QAPHEKAQRGSVVSSPVHAG*PSATNPRPARGTRINQFHSQLCPRRLSPVATKQPPAP 214 Q P+ AQ V P A P PRPA+ + + Q PV+ + PAP Sbjct: 93 QPPYASAQPRQPVQQPPEAQVPPQHVPRPAQPVQQPAYQPQPEQPLQQPVSPQVAPAP 150
>SYN1_MOUSE (O88935) Synapsin-1 (Synapsin I)| Length = 706 Score = 27.3 bits (59), Expect = 8.8 Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 1/36 (2%) Frame = +1 Query: 148 PVPLAALPTSTESSCHEAATRSVPCAPVAT-GAPHP 252 P P AA P +T S +A R+ APVA+ AP P Sbjct: 33 PPPSAASPGATPGSATASAERASTAAPVASPAAPSP 68
>PC11X_PONPY (Q6WXV7) Protocadherin-11 X-linked precursor (Protocadherin-11)| (Protocadherin on the X chromosome) Length = 1347 Score = 27.3 bits (59), Expect = 8.8 Identities = 22/62 (35%), Positives = 26/62 (41%), Gaps = 4/62 (6%) Frame = +1 Query: 85 PRPRRIALCHQPPSCSRDA--HQP--VPLAALPTSTESSCHEAATRSVPCAPVATGAPHP 252 P + IALCH PP A H P V AL S S+ A S P A A + Sbjct: 1200 PVTQTIALCHSPPPIQVSALHHSPPLVQATALRHSPPSAQASALCYSPPLAQAAAISHSS 1259 Query: 253 PM 258 P+ Sbjct: 1260 PL 1261
>PC11X_PANTR (Q71M42) Protocadherin-11 X-linked precursor (Protocadherin-11)| (Protocadherin on the X chromosome) Length = 1347 Score = 27.3 bits (59), Expect = 8.8 Identities = 22/62 (35%), Positives = 26/62 (41%), Gaps = 4/62 (6%) Frame = +1 Query: 85 PRPRRIALCHQPPSCSRDA--HQP--VPLAALPTSTESSCHEAATRSVPCAPVATGAPHP 252 P + IALCH PP A H P V AL S S+ A S P A A + Sbjct: 1200 PVTQTIALCHSPPPIQVSALHHSPPLVQATALHHSPPSAQASALCYSPPLAQAAAISHSS 1259 Query: 253 PM 258 P+ Sbjct: 1260 PL 1261
>PC11X_PANPA (Q6WYY1) Protocadherin-11 X-linked precursor (Protocadherin-11)| (Protocadherin on the X chromosome) Length = 1347 Score = 27.3 bits (59), Expect = 8.8 Identities = 22/62 (35%), Positives = 26/62 (41%), Gaps = 4/62 (6%) Frame = +1 Query: 85 PRPRRIALCHQPPSCSRDA--HQP--VPLAALPTSTESSCHEAATRSVPCAPVATGAPHP 252 P + IALCH PP A H P V AL S S+ A S P A A + Sbjct: 1200 PVTQTIALCHSPPPIQVSALHHSPPLVQATALHHSPPSAQASALCYSPPLAQAAAISHSS 1259 Query: 253 PM 258 P+ Sbjct: 1260 PL 1261
>PC11X_HUMAN (Q9BZA7) Protocadherin-11 X-linked precursor (Protocadherin-11)| (Protocadherin on the X chromosome) (PCDH-X) (Protocadherin-S) Length = 1347 Score = 27.3 bits (59), Expect = 8.8 Identities = 22/62 (35%), Positives = 26/62 (41%), Gaps = 4/62 (6%) Frame = +1 Query: 85 PRPRRIALCHQPPSCSRDA--HQP--VPLAALPTSTESSCHEAATRSVPCAPVATGAPHP 252 P + IALCH PP A H P V AL S S+ A S P A A + Sbjct: 1200 PVTQTIALCHSPPPIQVSALHHSPPLVQATALHHSPPSAQASALCYSPPLAQAAAISHSS 1259 Query: 253 PM 258 P+ Sbjct: 1260 PL 1261
>PC11X_GORGO (Q6X862) Protocadherin-11 X-linked precursor (Protocadherin-11)| (Protocadherin on the X chromosome) Length = 1347 Score = 27.3 bits (59), Expect = 8.8 Identities = 22/62 (35%), Positives = 26/62 (41%), Gaps = 4/62 (6%) Frame = +1 Query: 85 PRPRRIALCHQPPSCSRDA--HQP--VPLAALPTSTESSCHEAATRSVPCAPVATGAPHP 252 P + IALCH PP A H P V AL S S+ A S P A A + Sbjct: 1200 PVTQTIALCHSPPPIQVSALRHSPPLVQATALHHSPPSAQASALCYSPPLAQAAAISHSS 1259 Query: 253 PM 258 P+ Sbjct: 1260 PL 1261
>M3K4_HUMAN (Q9Y6R4) Mitogen-activated protein kinase kinase kinase 4 (EC| 2.7.11.25) (MAPK/ERK kinase kinase 4) (MEK kinase 4) (MEKK 4) (MAP three kinase 1) Length = 1607 Score = 27.3 bits (59), Expect = 8.8 Identities = 18/57 (31%), Positives = 23/57 (40%), Gaps = 4/57 (7%) Frame = +1 Query: 85 PRPRRIALCHQPPSCSRDAHQPVPLAALPT----STESSCHEAATRSVPCAPVATGA 243 PRP ++ CH P P P +PT ST S +A + P A A A Sbjct: 1149 PRPMKVPRCHSDP--------PNPHLIIPTPEGFSTRSMPSDARSHGSPAAAAAAAA 1197
>CR030_HUMAN (Q8N787) Protein C18orf30| Length = 583 Score = 27.3 bits (59), Expect = 8.8 Identities = 9/11 (81%), Positives = 9/11 (81%) Frame = +2 Query: 203 PPAPCRALPWR 235 PPAPCR PWR Sbjct: 476 PPAPCRDYPWR 486
>V120_HHV11 (P10221) Capsid assembly protein UL37| Length = 1123 Score = 27.3 bits (59), Expect = 8.8 Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 1/75 (1%) Frame = +1 Query: 22 RALELASGSS*KGPAWQRRLFPRPRRIALCHQPPSCSRDAHQPVPLAALPTSTESSCHEA 201 RA +L SG G + + R RR++ C+Q +R A P P+A + Sbjct: 884 RASKLLSGDQVPGFCFMGQFLARWRRLSACYQ---AARAAAGPEPVAEFVQELHDTWKGL 940 Query: 202 AT-RSVPCAPVATGA 243 T R+V AP+ + A Sbjct: 941 QTERAVVVAPLVSSA 955
>PLYA_MYCPO (Q12639) Pectin lyase precursor (EC 4.2.2.10)| Length = 299 Score = 27.3 bits (59), Expect = 8.8 Identities = 17/49 (34%), Positives = 24/49 (48%) Frame = +2 Query: 104 PSATNPRPARGTRINQFHSQLCPRRLSPVATKQPPAPCRALPWRPELRT 250 PSA+ P P+R TR+ F S + R L+ + +P R LRT Sbjct: 52 PSASLPPPSRVTRLPLFSSLVLSRALATTSRSAATSPSSDRTARSCLRT 100 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 54,716,315 Number of Sequences: 219361 Number of extensions: 1081587 Number of successful extensions: 3843 Number of sequences better than 10.0: 48 Number of HSP's better than 10.0 without gapping: 3666 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3840 length of database: 80,573,946 effective HSP length: 112 effective length of database: 56,005,514 effective search space used: 1344132336 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
