ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bastl13a05 |
|---|---|
| Clone Library Name | barley_pub |
>BEGIN_SHEEP (Q6R6L0) Brain-enriched guanylate kinase-associated protein| Length = 653 Score = 33.1 bits (74), Expect = 0.27 Identities = 22/61 (36%), Positives = 28/61 (45%) Frame = -2 Query: 368 PVPFHPLRNPRGSTSACRMACSPCRSACAITTPSDAWPRAGDAECSRRTSSDSASVTPLL 189 P P LR+ R S M SP A +P A+PRAG + SR+ S A + L Sbjct: 592 PEPELSLRSSRDSLEPSSMEASPEMHPGARLSPQPAFPRAGSSGLSRKDSLTKAQLYGTL 651 Query: 188 L 186 L Sbjct: 652 L 652
>IF2_STRCO (Q8CJQ8) Translation initiation factor IF-2| Length = 1033 Score = 33.1 bits (74), Expect = 0.27 Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Frame = -2 Query: 416 PRAHLTPAHSPEQAPRPVPFHPLRNPRGSTSACRMACSPCRSACAIT-TPSDAWPRAGDA 240 P A PA +P Q PRP P P PR + +A P A T P+ + P+ G A Sbjct: 111 PAAPSAPAPAPSQGPRPTP-GPKPAPRPAPAAPEFTAPPAAPAAPSTPAPAPSGPKPGGA 169
>HMEN_ANOGA (O02491) Segmentation polarity homeobox protein engrailed| Length = 596 Score = 32.0 bits (71), Expect = 0.59 Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 3/78 (3%) Frame = -2 Query: 389 SPEQAPRPVPFHPLRNPRGSTSACRMACSPCRSACAITTPSDAWPRAGDAECSRRTSSDS 210 SP+ AP P H ST+ MA + AC TT + + +G + S T + Sbjct: 8 SPQSAPSPPHHHHSSQSPTSTTTVTMATASPVPACTTTTTTTS--TSGASAASSPTRDEM 65 Query: 209 ASVTPLLLLH---TPIGA 165 + V P+ LH P+G+ Sbjct: 66 SLVVPISPLHIKQEPLGS 83
>Y1786_VIBCH (Q9KR57) Putative radC-like protein VC1786| Length = 158 Score = 31.6 bits (70), Expect = 0.78 Identities = 14/35 (40%), Positives = 21/35 (60%) Frame = -1 Query: 354 PAQEPPRVDQRLPDGLQPLQVRLRDHHAVGRLAAS 250 P+Q R+ QRL D L + +R+ DH VG+ + S Sbjct: 117 PSQADRRITQRLKDALSLVDIRVLDHVVVGKSSVS 151
>PACC_YEAST (P33400) pH-response transcription factor pacC/RIM101 (pH-response| regulator protein RIM101) (Regulator of IME2 protein 1) Length = 625 Score = 31.2 bits (69), Expect = 1.0 Identities = 20/56 (35%), Positives = 27/56 (48%) Frame = -2 Query: 335 GSTSACRMACSPCRSACAITTPSDAWPRAGDAECSRRTSSDSASVTPLLLLHTPIG 168 GSTS+ +C P S + TP A + +SSDS+S +PL H P G Sbjct: 78 GSTSS---SCLPYHSTSHLNTPPYDLLGASAVSPTTSSSSDSSSSSPLAQAHNPAG 130
>TMPSD_MOUSE (Q5U405) Transmembrane protease, serine 13 (EC 3.4.21.-) (Mosaic| serine protease) (Membrane-type mosaic serine protease) Length = 543 Score = 31.2 bits (69), Expect = 1.0 Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 5/88 (5%) Frame = -2 Query: 410 AHLTPAHSPEQAP---RPVPFHPLRNPRGSTSACRMA--CSPCRSACAITTPSDAWPRAG 246 A +PA +P QA P P R P ++ A SP R++ A PS + +G Sbjct: 21 ARTSPARAPPQASPARTPPQASPARTPPQASPARAPPPQASPARASPARAPPSRS--SSG 78 Query: 245 DAECSRRTSSDSASVTPLLLLHTPIGAI 162 + +R S+ S+ L+ TP+GA+ Sbjct: 79 RSSSARSASTTSSPTRVYLVRATPVGAV 106
>KCNH2_HUMAN (Q12809) Potassium voltage-gated channel subfamily H member 2| (Voltage-gated potassium channel subunit Kv11.1) (Ether-a-go-go related gene potassium channel 1) (H-ERG) (Erg1) (Ether-a-go-go related protein 1) (Eag-related protein 1) (eag homo Length = 1159 Score = 30.8 bits (68), Expect = 1.3 Identities = 31/93 (33%), Positives = 41/93 (44%), Gaps = 5/93 (5%) Frame = -2 Query: 413 RAHLTPAHSPEQAPRPVPF---HPLRNPRGSTSACRMACSPCRSACAITTPSDAWPRAGD 243 RA + P P AP +P H L NP S S+C +A + R +CA + + A D Sbjct: 232 RALVGPGSPPRSAPGQLPSPRAHSL-NPDASGSSCSLARTRSRESCASVRRASS---ADD 287 Query: 242 AECSRRTSSDSASVTPLLLLHTPIGAI--LRNG 150 E R A V P H GA+ LR+G Sbjct: 288 IEAMR------AGVLPPPPRHASTGAMHPLRSG 314
>E1A_ADE05 (P03255) Early E1A 32 kDa protein| Length = 289 Score = 30.0 bits (66), Expect = 2.3 Identities = 14/40 (35%), Positives = 18/40 (45%) Frame = -2 Query: 386 PEQAPRPVPFHPLRNPRGSTSACRMACSPCRSACAITTPS 267 PE P P P P R P+ + + R SP C +T S Sbjct: 192 PEPEPEPEPARPTRRPKMAPAILRRPTSPVSRECNSSTDS 231
>CP306_DROME (Q9VWR5) Cytochrome P450 306a1 (EC 1.14.-.-) (CYPCCCVIA1) (Phantom| protein) (Dmphm) Length = 574 Score = 30.0 bits (66), Expect = 2.3 Identities = 21/63 (33%), Positives = 26/63 (41%) Frame = +3 Query: 57 VRGYIHRNCITSRVALGLDPGASGGSGRAWLAVT*YGTNGCVEEQ*WCHARAVTAGPPAA 236 VR + R+ +T R L L G GG G C +E W HAR T A Sbjct: 102 VRDFFRRDVMTGRAPLYLTHGIMGGFGII-----------CAQEDIWRHARRETIDWLKA 150 Query: 237 LGV 245 LG+ Sbjct: 151 LGM 153
>KCNH2_RAT (O08962) Potassium voltage-gated channel subfamily H member 2| (Voltage-gated potassium channel subunit Kv11.1) (Ether-a-go-go-related gene potassium channel 1) (ERG1) (r-ERG) (RERG) (Ether-a-go-go-related protein 1) (Eag-related protein 1) Length = 1163 Score = 29.6 bits (65), Expect = 2.9 Identities = 30/94 (31%), Positives = 40/94 (42%), Gaps = 6/94 (6%) Frame = -2 Query: 413 RAHLTPAHSPEQA----PRPVPFHPLRNPRGSTSACRMACSPCRSACAITTPSDAWPRAG 246 RA + PA + A P P P NP S S+C +A + R +CA + + A Sbjct: 232 RALVGPASASPVASIPGPHPSPRAQSLNPDASGSSCSLARTRSRESCASVRRASS---AD 288 Query: 245 DAECSRRTSSDSASVTPLLLLHTPIGAI--LRNG 150 D E R A PL H GA+ LR+G Sbjct: 289 DIEAMR------AGALPLPPRHASTGAMHPLRSG 316
>5HT6R_RAT (P31388) 5-hydroxytryptamine 6 receptor (5-HT-6) (Serotonin| receptor 6) (ST-B17) Length = 436 Score = 29.6 bits (65), Expect = 2.9 Identities = 21/62 (33%), Positives = 23/62 (37%) Frame = -2 Query: 416 PRAHLTPAHSPEQAPRPVPFHPLRNPRGSTSACRMACSPCRSACAITTPSDAWPRAGDAE 237 P H P H P A P P PL SAC C I TP PRA ++ Sbjct: 336 PCVHCPPEHRP--ALPPPPCGPLTAVPDQASACSRCCLCLCRQTQIQTPLQGAPRACSSQ 393 Query: 236 CS 231 S Sbjct: 394 PS 395
>HIP_PARSP (P00264) High-potential iron-sulfur protein (HiPIP)| Length = 71 Score = 29.6 bits (65), Expect = 2.9 Identities = 13/34 (38%), Positives = 17/34 (50%) Frame = +1 Query: 256 GQASDGVVIAQADLQGLQAIRQALVDPRGFLSGW 357 G+ D + QAD QG Q Q V+P G+ W Sbjct: 34 GEQCDNCMFFQADSQGCQLFPQNSVEPAGWCQSW 67
>TISD_MOUSE (P23949) Butyrate response factor 2 (TIS11D protein)| Length = 367 Score = 29.3 bits (64), Expect = 3.8 Identities = 13/27 (48%), Positives = 16/27 (59%) Frame = -2 Query: 341 PRGSTSACRMACSPCRSACAITTPSDA 261 P S S+C + S C SA A +TPS A Sbjct: 266 PSSSASSCSSSASSCSSASAASTPSGA 292
>HNRL1_MOUSE (Q8VDM6) Heterogeneous nuclear ribonucleoprotein U-like protein 1| Length = 859 Score = 29.3 bits (64), Expect = 3.8 Identities = 15/43 (34%), Positives = 22/43 (51%) Frame = -2 Query: 416 PRAHLTPAHSPEQAPRPVPFHPLRNPRGSTSACRMACSPCRSA 288 P+ P P+Q P P + P RNP G++S + + P SA Sbjct: 701 PQQPPPPQPPPQQPPPPPSYSPARNPPGASSYNKNSNIPGSSA 743
>MTB_SALAL (P68502) Metallothionein B (MT-B)| Length = 60 Score = 29.3 bits (64), Expect = 3.8 Identities = 14/45 (31%), Positives = 18/45 (40%) Frame = -2 Query: 344 NPRGSTSACRMACSPCRSACAITTPSDAWPRAGDAECSRRTSSDS 210 N GS AC+ C+ +C PSD A C +T S Sbjct: 13 NCGGSCKCSNCACTSCKKSCCPCCPSDCSKCASGCVCKGKTCDTS 57
>MTB_ONCMY (P68501) Metallothionein B (MT-B)| Length = 60 Score = 29.3 bits (64), Expect = 3.8 Identities = 14/45 (31%), Positives = 18/45 (40%) Frame = -2 Query: 344 NPRGSTSACRMACSPCRSACAITTPSDAWPRAGDAECSRRTSSDS 210 N GS AC+ C+ +C PSD A C +T S Sbjct: 13 NCGGSCKCSNCACTSCKKSCCPCCPSDCSKCASGCVCKGKTCDTS 57
>ENV_RMCFV (P06445) Env polyprotein precursor (Coat polyprotein) [Contains:| Coat protein GP70; Coat protein p12E; Spike protein p15E] Length = 640 Score = 28.9 bits (63), Expect = 5.0 Identities = 21/68 (30%), Positives = 27/68 (39%), Gaps = 15/68 (22%) Frame = -2 Query: 341 PRGSTSACRMACSPCRSACAITTPSD------AWPRA---------GDAECSRRTSSDSA 207 P G+T AC +PC SA + +D WPR E S R + Sbjct: 387 PAGTTWACNTGLTPCLSATVLNRTTDYCVLVELWPRVTYHPPSYVYSQFEKSYRHKREPV 446 Query: 206 SVTPLLLL 183 S+T LLL Sbjct: 447 SLTLALLL 454
>ENV_MLVF5 (P03390) Env polyprotein precursor [Contains: Coat protein GP70;| Spike protein p15E; R protein] Length = 675 Score = 28.9 bits (63), Expect = 5.0 Identities = 21/68 (30%), Positives = 27/68 (39%), Gaps = 15/68 (22%) Frame = -2 Query: 341 PRGSTSACRMACSPCRSACAITTPSD------AWPRA---------GDAECSRRTSSDSA 207 P G+T AC +PC SA + +D WPR E S R + Sbjct: 423 PTGTTWACNTGLTPCLSATVLNRTTDYCVLVELWPRVTYHPPSYVYSQFEKSYRHKREPV 482 Query: 206 SVTPLLLL 183 S+T LLL Sbjct: 483 SLTLALLL 490
>BAK1_ARATH (Q94F62) BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1| precursor (EC 2.7.11.1) (BRI1-associated receptor kinase 1) (Somatic embryogenesis receptor-like kinase 3) Length = 615 Score = 28.5 bits (62), Expect = 6.6 Identities = 14/44 (31%), Positives = 21/44 (47%) Frame = +1 Query: 277 VIAQADLQGLQAIRQALVDPRGFLSGWNGTGLGACSGEWAGVKC 408 V A+ L A++ +L DP L W+ T + C+ W V C Sbjct: 23 VSGNAEGDALSALKNSLADPNKVLQSWDATLVTPCT--WFHVTC 64
>VSIG2_MOUSE (Q9Z109) V-set and immunoglobulin domain-containing protein 2| precursor (CT-like protein) (Cortical thymocyte-like protein) Length = 328 Score = 28.5 bits (62), Expect = 6.6 Identities = 15/41 (36%), Positives = 18/41 (43%) Frame = -2 Query: 362 PFHPLRNPRGSTSACRMACSPCRSACAITTPSDAWPRAGDA 240 P HPL + G TS A CRS+ P W R G + Sbjct: 146 PSHPLCSQSGQTSVGGSAALGCRSSEGAPKPVYNWERLGSS 186
>SYFA_CAUCR (Q9A9E4) Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase alpha chain) (PheRS) Length = 357 Score = 28.5 bits (62), Expect = 6.6 Identities = 19/38 (50%), Positives = 22/38 (57%) Frame = +1 Query: 277 VIAQADLQGLQAIRQALVDPRGFLSGWNGTGLGACSGE 390 V A +DLQ L A+R A V G +SG T LGA S E Sbjct: 15 VAAASDLQALDAVRVAAVGKTGSISGLLKT-LGAMSPE 51
>KCNH2_CANFA (Q9TSZ3) Potassium voltage-gated channel subfamily H member 2| (Voltage-gated potassium channel subunit Kv11.1) (Ether-a-go-go-related gene potassium channel 1) (ERG1) (c-erg) (DERG) (Ether-a-go-go-related protein 1) (Eag-related protein 1) Length = 1158 Score = 28.5 bits (62), Expect = 6.6 Identities = 17/39 (43%), Positives = 22/39 (56%) Frame = -2 Query: 398 PAHSPEQAPRPVPFHPLRNPRGSTSACRMACSPCRSACA 282 PA +PE P P H L NP S S+C +A + R +CA Sbjct: 241 PAGAPEPLPSPRA-HSL-NPDASGSSCSLARTRSRESCA 277
>E1A_ADE02 (P03254) Early E1A 32 kDa protein| Length = 289 Score = 28.5 bits (62), Expect = 6.6 Identities = 14/40 (35%), Positives = 17/40 (42%) Frame = -2 Query: 386 PEQAPRPVPFHPLRNPRGSTSACRMACSPCRSACAITTPS 267 PE P P P P R P+ + R SP C +T S Sbjct: 192 PEPEPEPEPARPTRRPKLVPAILRRPTSPVSRECNSSTDS 231
>SIN3A_MOUSE (Q60520) Paired amphipathic helix protein Sin3a (Transcriptional| corepressor Sin3a) (Histone deacetylase complex subunit Sin3a) Length = 1282 Score = 28.5 bits (62), Expect = 6.6 Identities = 17/81 (20%), Positives = 34/81 (41%) Frame = -2 Query: 413 RAHLTPAHSPEQAPRPVPFHPLRNPRGSTSACRMACSPCRSACAITTPSDAWPRAGDAEC 234 + H P H + P+P P HP P ++ +P +A ++ PS ++ Sbjct: 207 QVHQIPTHGIQPQPQPPPQHP-SQPSSQSAPTPAQPAPQPTAAKVSKPSQLQAHTPASQQ 265 Query: 233 SRRTSSDSASVTPLLLLHTPI 171 + ++ +P + HTP+ Sbjct: 266 TPPLPPYASPRSPPVQPHTPV 286
>TA29_TOBAC (P24804) Anther-specific protein TA-29| Length = 321 Score = 28.5 bits (62), Expect = 6.6 Identities = 17/45 (37%), Positives = 24/45 (53%) Frame = +1 Query: 265 SDGVVIAQADLQGLQAIRQALVDPRGFLSGWNGTGLGACSGEWAG 399 SD + +AD L+A + +D +GF G G G+G G WAG Sbjct: 27 SDAIKAKEADHDNLKAHTLSNIDAKGF-GGGGGFGIG---GGWAG 67
>JDP_DROME (Q9TVP3) J domain-containing protein (dJDP)| Length = 195 Score = 28.5 bits (62), Expect = 6.6 Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 2/43 (4%) Frame = +1 Query: 283 AQADLQGLQAIRQALVDP--RGFLSGWNGTGLGACSGEWAGVK 405 A+A Q L+ ++ L DP R W +G+ +W G+K Sbjct: 55 AEAKFQQLKEAKETLCDPEKRAIYDKWRNSGISMSYKQWLGMK 97
>RADC_VIBVY (Q7MPS7) DNA repair protein radC homolog| Length = 224 Score = 28.1 bits (61), Expect = 8.6 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = -1 Query: 354 PAQEPPRVDQRLPDGLQPLQVRLRDHHAVG 265 P+Q R+ +RL D L + +R+ DH VG Sbjct: 182 PSQADRRITRRLSDALGLVDIRVLDHFVVG 211
>RADC_VIBVU (Q8DDY0) DNA repair protein radC homolog| Length = 224 Score = 28.1 bits (61), Expect = 8.6 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = -1 Query: 354 PAQEPPRVDQRLPDGLQPLQVRLRDHHAVG 265 P+Q R+ +RL D L + +R+ DH VG Sbjct: 182 PSQADRRITRRLSDALGLVDIRVLDHFVVG 211
>RADC_VIBCH (Q9KVC9) DNA repair protein radC homolog| Length = 224 Score = 28.1 bits (61), Expect = 8.6 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = -1 Query: 354 PAQEPPRVDQRLPDGLQPLQVRLRDHHAVG 265 P+Q R+ RL D L +++R+ DH VG Sbjct: 182 PSQADRRITDRLRDALGLVEIRVLDHFVVG 211
>ENV_FLVC6 (P21443) Env polyprotein precursor [Contains: Coat protein GP70;| Spike protein p15E] Length = 668 Score = 28.1 bits (61), Expect = 8.6 Identities = 27/104 (25%), Positives = 38/104 (36%), Gaps = 16/104 (15%) Frame = -2 Query: 416 PRAHLTPAHSPEQAPRPVPFHPLRNPRGSTSACRMACSPCRSACAITTPSD------AWP 255 P+ H + ++ R H L P G+ AC +PC S + SD WP Sbjct: 386 PKTHQALCNKTQKGHRGT--HYLVAPNGTYWACNTGLTPCISMAVLNWTSDFCVLTELWP 443 Query: 254 RA---------GDAECSRRTSSDSASVTPLLLL-HTPIGAILRN 153 R E R D S+T L+L +G + RN Sbjct: 444 RITYHEPEYIYSHFENKPRFKRDPISLTVALMLGGITVGGMARN 487
>MILK1_MOUSE (Q8BGT6) Molecule interacting with Rab13 (MIRab13) (MICAL-like| protein 1) Length = 870 Score = 28.1 bits (61), Expect = 8.6 Identities = 24/71 (33%), Positives = 33/71 (46%) Frame = -2 Query: 404 LTPAHSPEQAPRPVPFHPLRNPRGSTSACRMACSPCRSACAITTPSDAWPRAGDAECSRR 225 +TP SP+ RP P P +P + A R++ S SA TPS P S Sbjct: 476 ITPTSSPKTKKRPAPRAPSASPL-AIHASRLSHSEPPSA----TPS---PALSVESLSSE 527 Query: 224 TSSDSASVTPL 192 +SS +A+ PL Sbjct: 528 SSSHTANAEPL 538
>RHSD_ECOLI (P16919) Protein rhsD precursor| Length = 1426 Score = 28.1 bits (61), Expect = 8.6 Identities = 11/25 (44%), Positives = 14/25 (56%) Frame = +1 Query: 328 VDPRGFLSGWNGTGLGACSGEWAGV 402 +DP G L W+ GAC+G GV Sbjct: 1253 IDPMGLLQTWDDARSGACTGGVCGV 1277
>MDCB_PSEAE (Q9I6S9) Probable 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A| synthase (EC 2.7.8.25) (2-(5''-triphosphoribosyl)-3'-dephospho-CoA synthase) Length = 293 Score = 28.1 bits (61), Expect = 8.6 Identities = 18/46 (39%), Positives = 20/46 (43%) Frame = +3 Query: 93 RVALGLDPGASGGSGRAWLAVT*YGTNGCVEEQ*WCHARAVTAGPP 230 R+AL DP A+ G YG G EE C RAV G P Sbjct: 141 RIALLDDPAAAIGDSHGERVRRRYGVGGAREEARLCFPRAVRHGLP 186
>HNRL1_HUMAN (Q9BUJ2) Heterogeneous nuclear ribonucleoprotein U-like protein 1| (Adenovirus early region 1B-associated protein 5) (E1B-55 kDa-associated protein 5) (E1B-AP5) Length = 856 Score = 28.1 bits (61), Expect = 8.6 Identities = 14/43 (32%), Positives = 22/43 (51%) Frame = -2 Query: 416 PRAHLTPAHSPEQAPRPVPFHPLRNPRGSTSACRMACSPCRSA 288 P+ P P+Q P P + P RNP G+++ + + P SA Sbjct: 698 PQQPPPPQPPPQQPPPPPSYSPARNPPGASTYNKNSNIPGSSA 740
>HXB13_MOUSE (P70321) Homeobox protein Hox-B13| Length = 286 Score = 28.1 bits (61), Expect = 8.6 Identities = 17/64 (26%), Positives = 23/64 (35%) Frame = -2 Query: 413 RAHLTPAHSPEQAPRPVPFHPLRNPRGSTSACRMACSPCRSACAITTPSDAWPRAGDAEC 234 + H P +P PVP+ S R + PC A+ T P G+ Sbjct: 63 QCHPCPGVPQGASPAPVPYGYFGGGYYSCRVSRSSLKPCAQTAALATYPSETPAPGEEYP 122 Query: 233 SRRT 222 SR T Sbjct: 123 SRPT 126
>ENV_FSVSM (P21445) Env polyprotein precursor [Contains: Coat protein GP70;| Spike protein p15E] Length = 645 Score = 28.1 bits (61), Expect = 8.6 Identities = 18/61 (29%), Positives = 23/61 (37%), Gaps = 6/61 (9%) Frame = -2 Query: 416 PRAHLTPAHSPEQAPRPVPFHPLRNPRGSTSACRMACSPCRSACAITTPSD------AWP 255 PR H + +Q H L P G+ AC +PC S + SD WP Sbjct: 369 PRTHQALCNKTQQGHTGA--HYLAAPNGTYWACNTGLTPCISMAVLNWTSDFCVLIELWP 426 Query: 254 R 252 R Sbjct: 427 R 427 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 45,767,589 Number of Sequences: 219361 Number of extensions: 783489 Number of successful extensions: 2848 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 2712 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2838 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2228238148 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
