ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl13a02 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Plus Query: 93 tcctcctcctcctccttcgacca 115 ||||||||||||||||||||||| Sbjct: 2342194 tcctcctcctcctccttcgacca 2342216
>gb|AC132255.3| Mus musculus BAC clone RP24-472I15 from chromosome 5, complete sequence Length = 168528 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 92 ttcctcctcctcctccttcgac 113 |||||||||||||||||||||| Sbjct: 10884 ttcctcctcctcctccttcgac 10905
>dbj|AB104824.1| Naja kaouthia HBA gene for alpha globin, partial cds Length = 523 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 89 gcgttcctcctcctcctccttc 110 |||||||||||||||||||||| Sbjct: 449 gcgttcctcctcctcctccttc 470
>gb|AC141896.5| Mus musculus BAC clone RP23-238B2 from 5, complete sequence Length = 240890 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 92 ttcctcctcctcctccttcgac 113 |||||||||||||||||||||| Sbjct: 231275 ttcctcctcctcctccttcgac 231296
>gb|AC110904.8| Mus musculus chromosome 7, clone RP24-174I24, complete sequence Length = 150036 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 90 cgttcctcctcctcctccttc 110 ||||||||||||||||||||| Sbjct: 107122 cgttcctcctcctcctccttc 107102
>gb|AC144767.4| Mus musculus BAC clone RP23-82F8 from chromosome 6, complete sequence Length = 229027 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 90 cgttcctcctcctcctccttc 110 ||||||||||||||||||||| Sbjct: 50589 cgttcctcctcctcctccttc 50609
>ref|XM_475099.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 429 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 93 tcctcctcctcctccttcgac 113 ||||||||||||||||||||| Sbjct: 121 tcctcctcctcctccttcgac 141
>ref|NM_184993.1| Oryza sativa (japonica cultivar-group), mRNA Length = 786 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 83 ggcgcggcgttcctcctcctcctcc 107 ||||||||| ||||||||||||||| Sbjct: 8 ggcgcggcgctcctcctcctcctcc 32
>gb|AC136999.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0009L15, complete sequence Length = 137570 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 93 tcctcctcctcctccttcgac 113 ||||||||||||||||||||| Sbjct: 70109 tcctcctcctcctccttcgac 70089
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 83 ggcgcggcgttcctcctcctcctcc 107 ||||||||| ||||||||||||||| Sbjct: 32059739 ggcgcggcgctcctcctcctcctcc 32059715
>gb|AC139242.2| Mus musculus BAC clone RP23-435I6 from chromosome 13, complete sequence Length = 189431 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 93 tcctcctcctcctccttcgac 113 ||||||||||||||||||||| Sbjct: 83497 tcctcctcctcctccttcgac 83477
>gb|AC102087.12| Mus musculus chromosome 13, clone RP23-166D15, complete sequence Length = 221034 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 93 tcctcctcctcctccttcgac 113 ||||||||||||||||||||| Sbjct: 3893 tcctcctcctcctccttcgac 3873
>emb|AL591926.8| Human DNA sequence from clone RP11-157L3 on chromosome 9 Contains five novel pseudogenes, a pseudogene similar to part of ribosomal protein L10 (RPL10) and two CpG islands, complete sequence Length = 182366 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 90 cgttcctcctcctcctccttc 110 ||||||||||||||||||||| Sbjct: 95282 cgttcctcctcctcctccttc 95262
>gb|AC158572.3| Mus musculus chromosome 7, clone RP24-402J3, complete sequence Length = 171722 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 90 cgttcctcctcctcctccttc 110 ||||||||||||||||||||| Sbjct: 37717 cgttcctcctcctcctccttc 37697
>gb|AC093176.6| Mus musculus Strain C57BL6/J chromosome 6 BAC, RP23-109H11, Complete Sequence, complete sequence Length = 192227 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 90 cgttcctcctcctcctccttc 110 ||||||||||||||||||||| Sbjct: 95438 cgttcctcctcctcctccttc 95418
>gb|AC163627.4| Mus musculus BAC clone RP23-341E13 from chromosome 6, complete sequence Length = 191467 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 90 cgttcctcctcctcctccttc 110 ||||||||||||||||||||| Sbjct: 13416 cgttcctcctcctcctccttc 13396
>gb|AC084320.10| Oryza sativa chromosome 3 BAC OSJNBa0091J19 genomic sequence, complete sequence Length = 178158 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 83 ggcgcggcgttcctcctcctcctcc 107 ||||||||| ||||||||||||||| Sbjct: 60864 ggcgcggcgctcctcctcctcctcc 60840
>gb|AC161117.4| Mus musculus BAC clone RP24-146I24 from chromosome 13, complete sequence Length = 195710 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 93 tcctcctcctcctccttcgac 113 ||||||||||||||||||||| Sbjct: 49649 tcctcctcctcctccttcgac 49669
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 93 tcctcctcctcctccttcgac 113 ||||||||||||||||||||| Sbjct: 16939072 tcctcctcctcctccttcgac 16939052 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 85 cgcggcgttcctcctcctcctcct 108 ||||||| |||||||||||||||| Sbjct: 16724401 cgcggcgatcctcctcctcctcct 16724378 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 84 gcgcggcgttcctcctcctcctcc 107 |||||||| ||||||||||||||| Sbjct: 6842962 gcgcggcggtcctcctcctcctcc 6842939
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 83 ggcgcggcgttcctcctcctcctcc 107 ||||||||| ||||||||||||||| Sbjct: 32150251 ggcgcggcgctcctcctcctcctcc 32150227
>ref|XM_392159.2| PREDICTED: Apis mellifera similar to Endoprotease FURIN (LOC408618), partial mRNA Length = 4054 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 93 tcctcctcctcctccttcgac 113 ||||||||||||||||||||| Sbjct: 1852 tcctcctcctcctccttcgac 1872
>gb|AC007809.8|AC007809 Drosophila melanogaster, chromosome 3R, region 88C-88C, BAC clone BACR45M03, complete sequence Length = 183439 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 93 tcctcctcctcctccttcgac 113 ||||||||||||||||||||| Sbjct: 81846 tcctcctcctcctccttcgac 81826
>gb|AC122714.2| Homo sapiens chromosome 5 clone RP11-451H23, complete sequence Length = 190024 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 93 tcctcctcctcctccttcgac 113 ||||||||||||||||||||| Sbjct: 161426 tcctcctcctcctccttcgac 161446
>gb|AC126915.2| Homo sapiens chromosome 5 clone RP11-21I4, complete sequence Length = 144199 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 93 tcctcctcctcctccttcgac 113 ||||||||||||||||||||| Sbjct: 59641 tcctcctcctcctccttcgac 59661
>dbj|AK184615.1| Mus musculus cDNA, clone:Y0G0130N19, strand:unspecified Length = 423 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 88 ggcgttcctcctcctcctcct 108 ||||||||||||||||||||| Sbjct: 417 ggcgttcctcctcctcctcct 397
>gb|AE005066.1| Halobacterium sp. NRC-1 section 97 of 170 of the complete genome Length = 11460 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 79 cggcggcgcggcgttcctcct 99 ||||||||||||||||||||| Sbjct: 3254 cggcggcgcggcgttcctcct 3274
>dbj|AK073162.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024B06, full insert sequence Length = 954 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 83 ggcgcggcgttcctcctcctcctcc 107 ||||||||| ||||||||||||||| Sbjct: 176 ggcgcggcgctcctcctcctcctcc 200
>dbj|AK061347.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-F01, full insert sequence Length = 953 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 83 ggcgcggcgttcctcctcctcctcc 107 ||||||||| ||||||||||||||| Sbjct: 178 ggcgcggcgctcctcctcctcctcc 202
>gb|AE003705.3| Drosophila melanogaster chromosome 3R, section 43 of 118 of the complete sequence Length = 216741 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 93 tcctcctcctcctccttcgac 113 ||||||||||||||||||||| Sbjct: 121577 tcctcctcctcctccttcgac 121557
>gb|AC172870.1| Brassica rapa subsp. pekinensis clone KBrH004A06, complete sequence Length = 145603 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 90 cgttcctcctcctcctccttc 110 ||||||||||||||||||||| Sbjct: 56566 cgttcctcctcctcctccttc 56586
>gb|AC171727.1| Lycopersicon esculentum chromosome 01 clone C01HBa0163B20, complete sequence Length = 134102 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 93 tcctcctcctcctccttcgac 113 ||||||||||||||||||||| Sbjct: 25601 tcctcctcctcctccttcgac 25581
>ref|NM_123613.3| Arabidopsis thaliana ARC6 (ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6); heat shock protein binding / unfolded protein binding AT5G42480 (ARC6) mRNA, complete cds Length = 2627 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 ttcctcctcctcctccttcg 111 |||||||||||||||||||| Sbjct: 278 ttcctcctcctcctccttcg 297
>gb|AC165256.2| Mus musculus BAC clone RP23-216O10 from chromosome 9, complete sequence Length = 231728 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 291 cacagagccacctcctgctg 310 |||||||||||||||||||| Sbjct: 131817 cacagagccacctcctgctg 131798
>gb|AC165289.2| Mus musculus BAC clone RP23-467L11 from chromosome 17, complete sequence Length = 193418 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 gttcctcctcctcctccttc 110 |||||||||||||||||||| Sbjct: 56102 gttcctcctcctcctccttc 56083
>ref|XM_465889.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1759 Score = 40.1 bits (20), Expect = 4.4 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 77 cccggcggcgcggcgttcctcctcctcctcct 108 ||||||||||||| | |||||||||||||||| Sbjct: 100 cccggcggcgcgg-gctcctcctcctcctcct 70
>ref|XM_465890.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1558 Score = 40.1 bits (20), Expect = 4.4 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 77 cccggcggcgcggcgttcctcctcctcctcct 108 ||||||||||||| | |||||||||||||||| Sbjct: 105 cccggcggcgcgg-gctcctcctcctcctcct 75
>ref|XM_465891.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1474 Score = 40.1 bits (20), Expect = 4.4 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 77 cccggcggcgcggcgttcctcctcctcctcct 108 ||||||||||||| | |||||||||||||||| Sbjct: 107 cccggcggcgcgg-gctcctcctcctcctcct 77
>ref|XM_478588.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2356 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ggcgttcctcctcctcctcc 107 |||||||||||||||||||| Sbjct: 148 ggcgttcctcctcctcctcc 167
>ref|XM_471773.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1146 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 85 cgcggcgttcctcctcctcctcct 108 ||||||| |||||||||||||||| Sbjct: 33 cgcggcgctcctcctcctcctcct 56
>ref|XM_471514.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1158 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 ggcgttcctcctcctcctcc 107 |||||||||||||||||||| Sbjct: 124 ggcgttcctcctcctcctcc 105
>gb|AC121363.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0036C12, complete sequence Length = 145517 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 85 cgcggcgttcctcctcctcctcct 108 ||||||| |||||||||||||||| Sbjct: 48511 cgcggcgatcctcctcctcctcct 48488
>gb|AC099644.6| Mus musculus chromosome 15, clone RP24-359B20, complete sequence Length = 135063 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 gttcctcctcctcctccttc 110 |||||||||||||||||||| Sbjct: 32419 gttcctcctcctcctccttc 32400
>gb|AF217490.1|AF217491S3 Homo sapiens fragile 16D oxido reductase (FOR) gene, exons 8, 9, and partial cds Length = 270752 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 ttcctcctcctcctccttcg 111 |||||||||||||||||||| Sbjct: 108776 ttcctcctcctcctccttcg 108757
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 cccggcggcgcggcgttcct 96 |||||||||||||||||||| Sbjct: 2013974 cccggcggcgcggcgttcct 2013993
>gb|AC005215.2| Homo sapiens chromosome 5, BAC clone 89K19 (LBNL H179), complete sequence Length = 110312 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 204 ttcacactggacaggaacaaggtc 227 |||||| ||||||||||||||||| Sbjct: 33004 ttcacagtggacaggaacaaggtc 33027
>gb|AC154425.2| Mus musculus BAC clone RP24-196O13 from chromosome 16, complete sequence Length = 161700 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 ttcctcctcctcctccttcg 111 |||||||||||||||||||| Sbjct: 94744 ttcctcctcctcctccttcg 94763
>gb|AC068664.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-376O11, complete sequence Length = 94429 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 tcctcctcctcctccttcga 112 |||||||||||||||||||| Sbjct: 82100 tcctcctcctcctccttcga 82081
>gb|AC124227.21| Mus musculus chromosome 1, clone RP23-118M13, complete sequence Length = 220762 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 gttcctcctcctcctccttc 110 |||||||||||||||||||| Sbjct: 131225 gttcctcctcctcctccttc 131244
>gb|AC107764.11| Mus musculus chromosome 15, clone RP23-179A6, complete sequence Length = 196178 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 ctcctcctcctccttcgacc 114 |||||||||||||||||||| Sbjct: 96374 ctcctcctcctccttcgacc 96393
>ref|XM_956923.1| Neurospora crassa OR74A hypothetical protein (NCU08667.1) partial mRNA Length = 1236 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 tcctcctcctccttcgacca 115 |||||||||||||||||||| Sbjct: 744 tcctcctcctccttcgacca 763
>ref|XM_329790.1| Neurospora crassa OR74A hypothetical protein (NCU08667.1) partial mRNA Length = 1236 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 tcctcctcctccttcgacca 115 |||||||||||||||||||| Sbjct: 744 tcctcctcctccttcgacca 763
>ref|NM_013510.3| Mus musculus erythrocyte protein band 4.1-like 1 (Epb4.1l1), transcript variant 1, mRNA Length = 6298 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 gcgttcctcctcctcctcct 108 |||||||||||||||||||| Sbjct: 3544 gcgttcctcctcctcctcct 3525
>ref|NM_001003815.2| Mus musculus erythrocyte protein band 4.1-like 1 (Epb4.1l1), transcript variant 2, mRNA Length = 6308 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 gcgttcctcctcctcctcct 108 |||||||||||||||||||| Sbjct: 3554 gcgttcctcctcctcctcct 3535
>gb|AC135914.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0074P11, complete sequence Length = 148753 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 84 gcgcggcgttcctcctcctcctcc 107 |||||||| ||||||||||||||| Sbjct: 73916 gcgcggcggtcctcctcctcctcc 73893
>ref|NM_001006664.2| Mus musculus erythrocyte protein band 4.1-like 1 (Epb4.1l1), transcript variant 3, mRNA Length = 6220 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 gcgttcctcctcctcctcct 108 |||||||||||||||||||| Sbjct: 3466 gcgttcctcctcctcctcct 3447
>gb|BC115943.1| Mus musculus cDNA clone IMAGE:40056028, with apparent retained intron Length = 3636 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 gcgttcctcctcctcctcct 108 |||||||||||||||||||| Sbjct: 3076 gcgttcctcctcctcctcct 3057
>gb|CP000080.1| Leishmania major strain Friedlin chromosome 29, complete sequence Length = 1212674 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 cctcctcctcctccttcgac 113 |||||||||||||||||||| Sbjct: 1076553 cctcctcctcctccttcgac 1076534
>gb|AC091458.5| Mus musculus chromosome 12, clone RP23-68M8, complete sequence Length = 289751 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 gttcctcctcctcctccttc 110 |||||||||||||||||||| Sbjct: 204810 gttcctcctcctcctccttc 204829
>gb|AY342408.1|AY342406S3 Mus musculus CMKLR1 (Cmklr1) gene, intron 2 Length = 985 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 gttcctcctcctcctccttc 110 |||||||||||||||||||| Sbjct: 507 gttcctcctcctcctccttc 488
>gb|AC137871.18| Mus musculus chromosome 15, clone RP23-41B9, complete sequence Length = 223529 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 gttcctcctcctcctccttc 110 |||||||||||||||||||| Sbjct: 50931 gttcctcctcctcctccttc 50950
>gb|AC146183.3| Pan troglodytes BAC clone CH251-548L16 from Y, complete sequence Length = 234142 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ggcgttcctcctcctcctcc 107 |||||||||||||||||||| Sbjct: 114989 ggcgttcctcctcctcctcc 115008
>gb|DQ483845.1| Gymnogyps californianus clone 11G microsatellite sequence Length = 653 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 gttcctcctcctcctccttc 110 |||||||||||||||||||| Sbjct: 595 gttcctcctcctcctccttc 576
>ref|XM_842820.1| Leishmania major strain Friedlin hypothetical protein (LMJ_0891) partial mRNA Length = 2535 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 cctcctcctcctccttcgac 113 |||||||||||||||||||| Sbjct: 829 cctcctcctcctccttcgac 810
>ref|XM_753651.1| Ustilago maydis 521 hypothetical protein (UM02597.1) partial mRNA Length = 1812 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 106 ccttcgaccaagtatcgaag 125 |||||||||||||||||||| Sbjct: 444 ccttcgaccaagtatcgaag 425
>gb|AC112676.8| Mus musculus chromosome 9, clone RP23-174F7, complete sequence Length = 230293 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 gttcctcctcctcctccttc 110 |||||||||||||||||||| Sbjct: 94538 gttcctcctcctcctccttc 94519
>gb|AC124171.3| Mus musculus BAC clone RP23-167E23 from chromosome 13, complete sequence Length = 198242 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 gcgttcctcctcctcctcct 108 |||||||||||||||||||| Sbjct: 102000 gcgttcctcctcctcctcct 102019
>emb|Z46791.1|CEC09G5 Caenorhabditis elegans Cosmid C09G5, complete sequence Length = 29688 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 tcctcctcctccttcgacca 115 |||||||||||||||||||| Sbjct: 14252 tcctcctcctccttcgacca 14233
>gb|AC125072.2| Mus musculus BAC clone RP23-458I4 from 3, complete sequence Length = 192026 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 tcctcctcctcctccttcga 112 |||||||||||||||||||| Sbjct: 31706 tcctcctcctcctccttcga 31725
>gb|AC136729.7| Mus musculus chromosome 3, clone RP23-175I24, complete sequence Length = 216602 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 gttcctcctcctcctccttc 110 |||||||||||||||||||| Sbjct: 26310 gttcctcctcctcctccttc 26329
>gb|BC034751.1| Mus musculus erythrocyte protein band 4.1-like 1, mRNA (cDNA clone MGC:36001 IMAGE:4954660), complete cds Length = 3872 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 gcgttcctcctcctcctcct 108 |||||||||||||||||||| Sbjct: 3467 gcgttcctcctcctcctcct 3448
>gb|AC107661.10| Mus musculus chromosome 10, clone RP23-174M1, complete sequence Length = 187233 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 gttcctcctcctcctccttc 110 |||||||||||||||||||| Sbjct: 135151 gttcctcctcctcctccttc 135132
>gb|AC163105.5| Mus musculus BAC clone RP23-259A11 from chromosome 14, complete sequence Length = 227806 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 gttcctcctcctcctccttc 110 |||||||||||||||||||| Sbjct: 87247 gttcctcctcctcctccttc 87266
>gb|AC156564.3| Mus musculus BAC clone RP24-81G20 from chromosome 8, complete sequence Length = 196445 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 gttcctcctcctcctccttc 110 |||||||||||||||||||| Sbjct: 114168 gttcctcctcctcctccttc 114187
>emb|AL611922.7| Human DNA sequence from clone RP11-633N4 on chromosome 9, complete sequence Length = 176612 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 cgttcctcctcctcctcctt 109 |||||||||||||||||||| Sbjct: 167126 cgttcctcctcctcctcctt 167145
>gb|AC183921.2| Pan troglodytes BAC clone CH251-617M1 from chromosome unknown, complete sequence Length = 188195 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 204 ttcacactggacaggaacaaggtc 227 |||||| ||||||||||||||||| Sbjct: 44519 ttcacagtggacaggaacaaggtc 44542
>gb|AY221469.1| Arabidopsis thaliana division protein (ARC6) mRNA, complete cds; nuclear gene for chloroplast product Length = 2438 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 ttcctcctcctcctccttcg 111 |||||||||||||||||||| Sbjct: 166 ttcctcctcctcctccttcg 185
>gb|AY221468.1| Arabidopsis thaliana division protein (ARC6) gene, complete cds; nuclear gene for chloroplast product Length = 3668 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 ttcctcctcctcctccttcg 111 |||||||||||||||||||| Sbjct: 642 ttcctcctcctcctccttcg 661
>gb|AY221467.1| Arabidopsis thaliana truncated division protein (arc6) gene, arc6-1 allele, complete cds; nuclear gene for chloroplast product Length = 3664 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 ttcctcctcctcctccttcg 111 |||||||||||||||||||| Sbjct: 642 ttcctcctcctcctccttcg 661
>gb|AC161195.4| Mus musculus chromosome 15, clone RP23-313M10, complete sequence Length = 166637 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 92 ttcctcctcctcctccttcgacca 115 ||||||||||||||||||| |||| Sbjct: 61123 ttcctcctcctcctccttcaacca 61146
>ref|XM_969680.1| PREDICTED: Tribolium castaneum similar to CG3799-PA, isoform A (LOC663644), mRNA Length = 2907 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 ttcctcctcctcctccttcg 111 |||||||||||||||||||| Sbjct: 240 ttcctcctcctcctccttcg 221
>emb|BX050648.1|CNS09B8S Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC27BA09 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 841 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 tcctcctcctcctccttcga 112 |||||||||||||||||||| Sbjct: 469 tcctcctcctcctccttcga 450
>emb|BX041254.1|CNS093ZU Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC12CB02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 739 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 tcctcctcctcctccttcga 112 |||||||||||||||||||| Sbjct: 240 tcctcctcctcctccttcga 221
>gb|AY150490.1| Arabidopsis thaliana unknown protein (At5g42480) mRNA, complete cds Length = 2436 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 ttcctcctcctcctccttcg 111 |||||||||||||||||||| Sbjct: 165 ttcctcctcctcctccttcg 184
>gb|AY091075.1| Arabidopsis thaliana unknown protein (At5g42480) mRNA, complete cds Length = 2637 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 ttcctcctcctcctccttcg 111 |||||||||||||||||||| Sbjct: 278 ttcctcctcctcctccttcg 297
>gb|AC163019.5| Mus musculus chromosome 19, clone RP24-290E5, complete sequence Length = 152969 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 gttcctcctcctcctccttc 110 |||||||||||||||||||| Sbjct: 33066 gttcctcctcctcctccttc 33047
>gb|AC160021.3| Pan troglodytes BAC clone CH251-564M21 from chromosome unknown, complete sequence Length = 201789 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 204 ttcacactggacaggaacaaggtc 227 |||||| ||||||||||||||||| Sbjct: 195213 ttcacagtggacaggaacaaggtc 195236
>emb|AL663007.2|OSJN00206 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0054B09, complete sequence Length = 146506 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 85 cgcggcgttcctcctcctcctcct 108 ||||||| |||||||||||||||| Sbjct: 19832 cgcggcgctcctcctcctcctcct 19855
>emb|AL591979.1| Listeria monocytogenes strain EGD, complete genome, segment 7/12 Length = 240050 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 121 cgaagattgcctttctcctcttca 144 ||||||||| |||||||||||||| Sbjct: 12055 cgaagattgtctttctcctcttca 12032
>gb|AC158986.2| Mus musculus BAC clone RP23-284L2 from chromosome 15, complete sequence Length = 226001 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 gttcctcctcctcctccttc 110 |||||||||||||||||||| Sbjct: 44330 gttcctcctcctcctccttc 44311
>emb|CR932966.2| Medicago truncatula chromosome 5 clone mth2-45l22, COMPLETE SEQUENCE Length = 112211 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 ttcctcctcctcctccttcg 111 |||||||||||||||||||| Sbjct: 95351 ttcctcctcctcctccttcg 95332
>emb|AL603710.8| Mouse DNA sequence from clone RP23-247B13 on chromosome 11 Contains the 3' end of the Nt5m gene for 5'-3'-nucleotidase (mitochondrial), four novel genes, the Rasd1 gene for RAS dexamethasone-induced 1, the 3' end of the Pemt gene for phosphatidylethanolamine N-methyltransferase and two CpG islands, complete sequence Length = 179124 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 tcctcctcctcctccttcga 112 |||||||||||||||||||| Sbjct: 175251 tcctcctcctcctccttcga 175232
>gb|AF533648.1| Musa acuminata alpha-amylase precursor, mRNA, complete cds Length = 1953 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 tcctcctcctcctccttcga 112 |||||||||||||||||||| Sbjct: 243 tcctcctcctcctccttcga 224
>gb|AC010635.6| Homo sapiens chromosome 5 clone CTD-2324F15, complete sequence Length = 81252 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 gttcctcctcctcctccttc 110 |||||||||||||||||||| Sbjct: 59823 gttcctcctcctcctccttc 59842
>gb|AC151612.2| Emiliania huxleyi clone JGIACCU-13I1, complete sequence Length = 35427 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 81 gcggcgcggcgttcctcctcctcc 104 ||||||||||| |||||||||||| Sbjct: 26314 gcggcgcggcgctcctcctcctcc 26291
>dbj|BS000630.2| Pan troglodytes chromosome Y clone: PTB-245N19, complete sequence Length = 149685 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ggcgttcctcctcctcctcc 107 |||||||||||||||||||| Sbjct: 108974 ggcgttcctcctcctcctcc 108993
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 ggcgttcctcctcctcctcc 107 |||||||||||||||||||| Sbjct: 18680304 ggcgttcctcctcctcctcc 18680285
>gb|AC008053.13| Homo sapiens chromosome 17, clone RP5-954K8, complete sequence Length = 110144 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 ttcctcctcctcctccttcg 111 |||||||||||||||||||| Sbjct: 27313 ttcctcctcctcctccttcg 27332
>gb|AC016933.20| Homo sapiens 3 BAC RP11-166D18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 153763 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 134 tctcctcttcaaagaggggttccc 157 |||| ||||||||||||||||||| Sbjct: 93915 tctcatcttcaaagaggggttccc 93892
>gb|AC079262.28| Homo sapiens 12 BAC RP11-560H17 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 208686 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 gttcctcctcctcctccttc 110 |||||||||||||||||||| Sbjct: 97159 gttcctcctcctcctccttc 97140
>gb|AC104365.4| Homo sapiens chromosome 18, clone RP11-108P20, complete sequence Length = 157871 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 54 tccacttcggagatccagcccgac 77 ||||||| |||||||||||||||| Sbjct: 133302 tccactttggagatccagcccgac 133325
>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 Length = 4429080 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 cggcgttcctcctcctcctccttc 110 |||| ||||||||||||||||||| Sbjct: 1388149 cggcattcctcctcctcctccttc 1388172
>gb|AC079317.25| Homo sapiens 12 BAC RP11-4K23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 147862 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 gttcctcctcctcctccttc 110 |||||||||||||||||||| Sbjct: 86533 gttcctcctcctcctccttc 86514
>dbj|AK147272.1| Mus musculus cDNA, RIKEN full-length enriched library, clone:M5C1005A05 product:erythrocyte protein band 4.1-like 1, full insert sequence Length = 5903 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 gcgttcctcctcctcctcct 108 |||||||||||||||||||| Sbjct: 3151 gcgttcctcctcctcctcct 3132
>gb|AC102948.2| Homo sapiens chromosome 17, clone RP11-635H17, complete sequence Length = 162171 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 92 ttcctcctcctcctccttcgacca 115 ||||||||||||||||||| |||| Sbjct: 80456 ttcctcctcctcctccttccacca 80433
>dbj|AK154704.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630103P07 product:erythrocyte protein band 4.1-like 1, full insert sequence Length = 5861 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 gcgttcctcctcctcctcct 108 |||||||||||||||||||| Sbjct: 3111 gcgttcctcctcctcctcct 3092
>dbj|AK147611.1| Mus musculus adult male brain UNDEFINED_CELL_LINE cDNA, RIKEN full-length enriched library, clone:M5C1089G17 product:erythrocyte protein band 4.1-like 1, full insert sequence Length = 6489 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 gcgttcctcctcctcctcct 108 |||||||||||||||||||| Sbjct: 3738 gcgttcctcctcctcctcct 3719
>gb|AC175203.2| Sporobolomyces roseus clone JGIBAIF-5E21, complete sequence Length = 35046 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 cctcctcctcctccttcgac 113 |||||||||||||||||||| Sbjct: 31445 cctcctcctcctccttcgac 31464
>dbj|AK164141.1| Mus musculus adult male hippocampus cDNA, RIKEN full-length enriched library, clone:C630002F24 product:erythrocyte protein band 4.1-like 1, full insert sequence Length = 2779 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 gcgttcctcctcctcctcct 108 |||||||||||||||||||| Sbjct: 26 gcgttcctcctcctcctcct 7
>ref|XM_627060.1| Cryptosporidium parvum Iowa II ubiquitin carboxyl terminal hydrolase domain that is fused to a MATH domain (cgd8_1530), partial mRNA Length = 4824 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 gcgttcctcctcctcctcct 108 |||||||||||||||||||| Sbjct: 3580 gcgttcctcctcctcctcct 3561
>gb|AC159099.4| Mus musculus chromosome 15, clone RP24-132A22, complete sequence Length = 147359 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 gttcctcctcctcctccttc 110 |||||||||||||||||||| Sbjct: 51540 gttcctcctcctcctccttc 51559
>gb|AC154646.2| Mus musculus BAC clone RP23-283B12 from chromosome 14, complete sequence Length = 189102 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 tcctcctcctcctccttcga 112 |||||||||||||||||||| Sbjct: 29197 tcctcctcctcctccttcga 29178
>gb|AC135178.13| Homo sapiens chromosome 17, clone RP11-849F2, complete sequence Length = 188340 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 ttcctcctcctcctccttcg 111 |||||||||||||||||||| Sbjct: 84208 ttcctcctcctcctccttcg 84189
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 85 cgcggcgttcctcctcctcctcct 108 ||||||| |||||||||||||||| Sbjct: 14182066 cgcggcgctcctcctcctcctcct 14182089 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ggcgttcctcctcctcctcc 107 |||||||||||||||||||| Sbjct: 11536070 ggcgttcctcctcctcctcc 11536089
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 tcattacatagttcaaagtc 260 |||||||||||||||||||| Sbjct: 27391527 tcattacatagttcaaagtc 27391546
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ggcgttcctcctcctcctcc 107 |||||||||||||||||||| Sbjct: 21306220 ggcgttcctcctcctcctcc 21306239
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 4.4 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 77 cccggcggcgcggcgttcctcctcctcctcct 108 ||||||||||||| | |||||||||||||||| Sbjct: 18139016 cccggcggcgcgg-gctcctcctcctcctcct 18138986
>gb|AC018904.6|AC018904 Homo sapiens chromosome 15 clone RP11-50C13 map 15q21.3, complete sequence Length = 158091 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 gttcctcctcctcctccttc 110 |||||||||||||||||||| Sbjct: 99221 gttcctcctcctcctccttc 99202
>emb|BX841670.1|CNS09YJH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS89ZC08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 919 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 ttcctcctcctcctccttcg 111 |||||||||||||||||||| Sbjct: 177 ttcctcctcctcctccttcg 196
>gb|AC046158.6| Homo sapiens chromosome 16 clone RP11-264L1, complete sequence Length = 150361 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 ttcctcctcctcctccttcg 111 |||||||||||||||||||| Sbjct: 83009 ttcctcctcctcctccttcg 82990
>gb|AC092936.9| Homo sapiens 12 BAC RP11-286J13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 217112 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 gttcctcctcctcctccttc 110 |||||||||||||||||||| Sbjct: 62959 gttcctcctcctcctccttc 62940
>gb|AY198329.1| Lolium perenne MADS4 mRNA, complete cds Length = 1119 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 tcctcctcctcctccttcga 112 |||||||||||||||||||| Sbjct: 98 tcctcctcctcctccttcga 79
>gb|AC006383.2|AC006383 Homo sapiens BAC clone RP11-498H20 from Y, complete sequence Length = 105210 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 ggcgttcctcctcctcctcc 107 |||||||||||||||||||| Sbjct: 4902 ggcgttcctcctcctcctcc 4883
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 ccgacccggcggcgcggcgt 92 |||||||||||||||||||| Sbjct: 7030890 ccgacccggcggcgcggcgt 7030871
>gb|AC104201.12| Mus musculus chromosome 19, clone RP24-531I1, complete sequence Length = 166165 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 gttcctcctcctcctccttc 110 |||||||||||||||||||| Sbjct: 62739 gttcctcctcctcctccttc 62720
>gb|AC126412.21| Mus musculus chromosome 3, clone RP24-267M22, complete sequence Length = 177266 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 gttcctcctcctcctccttc 110 |||||||||||||||||||| Sbjct: 2248 gttcctcctcctcctccttc 2229
>gb|AC130329.8| Homo sapiens chromosome 17, clone RP13-348C17, complete sequence Length = 74378 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 ttcctcctcctcctccttcg 111 |||||||||||||||||||| Sbjct: 28748 ttcctcctcctcctccttcg 28729
>gb|AC010489.4|AC010489 Homo sapiens chromosome 5 clone CTD-2332G20, complete sequence Length = 146437 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 204 ttcacactggacaggaacaaggtc 227 |||||| ||||||||||||||||| Sbjct: 57779 ttcacagtggacaggaacaaggtc 57756
>gb|AC007375.6|AC007375 Homo sapiens chromosome 14 clone RP11-463C8 containing POMT2 gene, partial cds; and unknown genes, complete sequence Length = 180331 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 ttcctcctcctcctccttcg 111 |||||||||||||||||||| Sbjct: 75601 ttcctcctcctcctccttcg 75582
>dbj|AP003736.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1008_E09 Length = 101964 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ggcgttcctcctcctcctcc 107 |||||||||||||||||||| Sbjct: 26388 ggcgttcctcctcctcctcc 26407
>dbj|AP005786.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0458H05 Length = 136299 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ggcgttcctcctcctcctcc 107 |||||||||||||||||||| Sbjct: 92505 ggcgttcctcctcctcctcc 92524
>dbj|AP005066.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0047E05 Length = 184323 Score = 40.1 bits (20), Expect = 4.4 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 77 cccggcggcgcggcgttcctcctcctcctcct 108 ||||||||||||| | |||||||||||||||| Sbjct: 62417 cccggcggcgcgg-gctcctcctcctcctcct 62387
>emb|AL929153.11| Mouse DNA sequence from clone RP23-55C8 on chromosome 2, complete sequence Length = 116887 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 gcgttcctcctcctcctcct 108 |||||||||||||||||||| Sbjct: 75102 gcgttcctcctcctcctcct 75083
>emb|AL691421.9| Mouse DNA sequence from clone RP23-21A16 on chromosome X, complete sequence Length = 221461 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 tcctcctcctcctccttcga 112 |||||||||||||||||||| Sbjct: 202293 tcctcctcctcctccttcga 202312
>dbj|AB016888.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MDH9 Length = 85791 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 ttcctcctcctcctccttcg 111 |||||||||||||||||||| Sbjct: 64241 ttcctcctcctcctccttcg 64260
>gb|AC117735.8| Mus musculus chromosome 5, clone RP24-132L16, complete sequence Length = 183861 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 tcctcctcctcctccttcga 112 |||||||||||||||||||| Sbjct: 88625 tcctcctcctcctccttcga 88644
>dbj|AK109318.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-188-G10, full insert sequence Length = 891 Score = 40.1 bits (20), Expect = 4.4 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 77 cccggcggcgcggcgttcctcctcctcctcct 108 ||||||||||||| | |||||||||||||||| Sbjct: 107 cccggcggcgcgg-gctcctcctcctcctcct 77
>dbj|AK101016.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023149E02, full insert sequence Length = 1759 Score = 40.1 bits (20), Expect = 4.4 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 77 cccggcggcgcggcgttcctcctcctcctcct 108 ||||||||||||| | |||||||||||||||| Sbjct: 100 cccggcggcgcgg-gctcctcctcctcctcct 70
>dbj|AK100722.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023116H24, full insert sequence Length = 2354 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ggcgttcctcctcctcctcc 107 |||||||||||||||||||| Sbjct: 148 ggcgttcctcctcctcctcc 167
>dbj|AK071948.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013078J21, full insert sequence Length = 1334 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 85 cgcggcgttcctcctcctcctcct 108 ||||||| |||||||||||||||| Sbjct: 87 cgcggcgctcctcctcctcctcct 110
>dbj|AK070138.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023041H15, full insert sequence Length = 1231 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 85 cgcggcgttcctcctcctcctcct 108 ||||||| |||||||||||||||| Sbjct: 142 cgcggcgatcctcctcctcctcct 119
>gb|AF175313.1|AF175313 Oncorhynchus mykiss cardiac sodium-calcium exchanger (NCX) mRNA, complete cds Length = 3302 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 gcggcgttcctcctcctcct 105 |||||||||||||||||||| Sbjct: 2150 gcggcgttcctcctcctcct 2131
>gb|AC151576.2| Mus musculus BAC clone RP24-260K24 from 8, complete sequence Length = 162663 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 gttcctcctcctcctccttc 110 |||||||||||||||||||| Sbjct: 155485 gttcctcctcctcctccttc 155504
>dbj|AK063549.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-117-D08, full insert sequence Length = 1474 Score = 40.1 bits (20), Expect = 4.4 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 77 cccggcggcgcggcgttcctcctcctcctcct 108 ||||||||||||| | |||||||||||||||| Sbjct: 107 cccggcggcgcgg-gctcctcctcctcctcct 77
>dbj|AK062572.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-D11, full insert sequence Length = 1558 Score = 40.1 bits (20), Expect = 4.4 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 77 cccggcggcgcggcgttcctcctcctcctcct 108 ||||||||||||| | |||||||||||||||| Sbjct: 105 cccggcggcgcgg-gctcctcctcctcctcct 75
>gb|AY106791.1| Zea mays PCO109680 mRNA sequence Length = 1137 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 tcctcctcctcctccttcga 112 |||||||||||||||||||| Sbjct: 937 tcctcctcctcctccttcga 918
>gb|AC118008.14| Mus musculus chromosome 15, clone RP23-435B2, complete sequence Length = 204342 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 92 ttcctcctcctcctccttcgacca 115 ||||||||||||||||||| |||| Sbjct: 148426 ttcctcctcctcctccttcaacca 148449
>gb|AC004811.2|AC004811 Homo sapiens clone 162B15, complete sequence Length = 62836 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 gttcctcctcctcctccttc 110 |||||||||||||||||||| Sbjct: 12130 gttcctcctcctcctccttc 12111
>dbj|AK122251.1| Mus musculus mRNA for mKIAA0338 protein Length = 6086 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 gcgttcctcctcctcctcct 108 |||||||||||||||||||| Sbjct: 3337 gcgttcctcctcctcctcct 3318
>gb|AC154589.3| Mus musculus BAC clone RP23-367D5 from chromosome 14, complete sequence Length = 205889 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 ttcctcctcctcctccttcg 111 |||||||||||||||||||| Sbjct: 165472 ttcctcctcctcctccttcg 165453
>gb|AC154880.17| Mus musculus chromosome 15, clone RP24-191N3, complete sequence Length = 184220 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 gttcctcctcctcctccttc 110 |||||||||||||||||||| Sbjct: 73336 gttcctcctcctcctccttc 73355
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 tcattacatagttcaaagtc 260 |||||||||||||||||||| Sbjct: 27317127 tcattacatagttcaaagtc 27317146
>emb|AL663008.3|OSJN00209 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0058J09, complete sequence Length = 164911 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ggcgttcctcctcctcctcc 107 |||||||||||||||||||| Sbjct: 19080 ggcgttcctcctcctcctcc 19099
>emb|AL731762.2|CNS07YPW Oryza sativa chromosome 12, . BAC OJ1119_E02 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 124605 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 tcattacatagttcaaagtc 260 |||||||||||||||||||| Sbjct: 59847 tcattacatagttcaaagtc 59866
>emb|AL807386.14| Mouse DNA sequence from clone RP23-190K7 on chromosome 2, complete sequence Length = 183076 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 gttcctcctcctcctccttc 110 |||||||||||||||||||| Sbjct: 41810 gttcctcctcctcctccttc 41829
>gb|AC136424.1| Homo sapiens chromosome 5 clone CTD-2363C16, complete sequence Length = 93767 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 92 ttcctcctcctcctccttcgacca 115 |||| ||||||||||||||||||| Sbjct: 13546 ttccccctcctcctccttcgacca 13523
>gb|AC170807.2| Mus musculus BAC clone RP23-374I2 from chromosome 17, complete sequence Length = 208318 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 gttcctcctcctcctccttc 110 |||||||||||||||||||| Sbjct: 192976 gttcctcctcctcctccttc 192957
>gb|AC132939.23| Mus musculus chromosome 5, clone RP24-91I11, complete sequence Length = 224918 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 gttcctcctcctcctccttc 110 |||||||||||||||||||| Sbjct: 200698 gttcctcctcctcctccttc 200679
>emb|AL662893.12| Mouse DNA sequence from clone RP23-202G21 on chromosome 11, complete sequence Length = 205405 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 ttcctcctcctcctccttcg 111 |||||||||||||||||||| Sbjct: 179784 ttcctcctcctcctccttcg 179765
>emb|AL591208.24| Mouse DNA sequence from clone RP23-149I2 on chromosome 12, complete sequence Length = 199854 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 gttcctcctcctcctccttc 110 |||||||||||||||||||| Sbjct: 100774 gttcctcctcctcctccttc 100755
>emb|AL805969.13| Mouse DNA sequence from clone RP23-40L1 on chromosome 4, complete sequence Length = 252953 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 tcctcctcctcctccttcga 112 |||||||||||||||||||| Sbjct: 241798 tcctcctcctcctccttcga 241817
>emb|AJ304861.1|MMU304861 Mus musculus partial Bfsp2 gene for phakinin (CP49 protein), exon 1 Length = 24180 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 291 cacagagccacctcctgctg 310 |||||||||||||||||||| Sbjct: 10948 cacagagccacctcctgctg 10929 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,274,210 Number of Sequences: 3902068 Number of extensions: 4274210 Number of successful extensions: 528051 Number of sequences better than 10.0: 163 Number of HSP's better than 10.0 without gapping: 155 Number of HSP's successfully gapped in prelim test: 9 Number of HSP's that attempted gapping in prelim test: 524086 Number of HSP's gapped (non-prelim): 4007 length of query: 335 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 313 effective length of database: 17,147,199,772 effective search space: 5367073528636 effective search space used: 5367073528636 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
