Clone Name | bastl12h06 |
---|---|
Clone Library Name | barley_pub |
>gb|BT009262.1| Triticum aestivum clone wlk4.pk0022.b7:fis, full insert mRNA sequence Length = 2997 Score = 406 bits (205), Expect = e-110 Identities = 273/296 (92%) Strand = Plus / Plus Query: 110 gtgactcgtaggagtgcggaggaggggtccttcggtcgccatggctcagatcttgctcca 169 |||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 91 gtgactagcaggagcgcggaggaggggtccttcggtcgccatggctcagatcttgctcca 150 Query: 170 tgggaacctccacgtcaccatcttcgaggcctcgtcgctctcccaccccggccgcgccag 229 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 151 tgggaacctccacgtcaccatcttcgaggcctcctcgctctcccaccccggccgcgccag 210 Query: 230 cggcggcgcccccaagttcatccgcaagtttgtggaggggattgaagacaccgtcggtgt 289 ||||||||||||||||||||||||||||||||| ||||| ||||| || || |||||||| Sbjct: 211 cggcggcgcccccaagttcatccgcaagtttgtagagggcattgaggaaactgtcggtgt 270 Query: 290 cggcaaaggcacctccaagctatatgccaccattgatcttgagagaactcgtgttgggcg 349 |||||||| | ||||||||||||||||||||||||||| |||| | ||||||||||||| Sbjct: 271 tggcaaaggaagctccaagctatatgccaccattgatctcgagaaagctcgtgttgggcg 330 Query: 350 taccaggatgctgagncacgagcctgtcaaccctcgctggtacgagcctttccaca 405 |||||||||| || | ||||||| ||||| ||||||||||||||| | ||||||| Sbjct: 331 taccaggatgttgggcaacgagcccgtcaatcctcgctggtacgagtcgttccaca 386
>dbj|AK119523.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E03, full insert sequence Length = 2831 Score = 190 bits (96), Expect = 2e-45 Identities = 218/259 (84%) Strand = Plus / Plus Query: 147 gccatggctcagatcttgctccatgggaacctccacgtcaccatcttcgaggcctcgtcg 206 |||||||| ||||| |||||||||||| || |||| ||||||||||||||| ||||| Sbjct: 117 gccatggcgcagatgctgctccatgggacgctgcacgccaccatcttcgaggcggcgtcg 176 Query: 207 ctctcccaccccggccgcgccagcggcggcgcccccaagttcatccgcaagtttgtggag 266 |||||| |||| |||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 177 ctctccaacccgcaccgcgccagcggaagcgcccccaagttcatccgcaagtttgtggag 236 Query: 267 gggattgaagacaccgtcggtgtcggcaaaggcacctccaagctatatgccaccattgat 326 |||||||| ||||| || ||||||||||||||| || ||||| | ||| | ||||||||| Sbjct: 237 gggattgaggacactgtgggtgtcggcaaaggcgccaccaaggtgtattctaccattgat 296 Query: 327 cttgagagaactcgtgttgggcgtaccaggatgctgagncacgagcctgtcaaccctcgc 386 || |||| | ||||||| ||||| || |||||| | | | ||||| ||||||||||| Sbjct: 297 ctggagaaagctcgtgtagggcgaactaggatgataaccaatgagcccatcaaccctcgc 356 Query: 387 tggtacgagcctttccaca 405 ||||| ||| | ||||||| Sbjct: 357 tggtatgagtcgttccaca 375
>dbj|AK100365.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023083O10, full insert sequence Length = 2430 Score = 190 bits (96), Expect = 2e-45 Identities = 218/259 (84%) Strand = Plus / Plus Query: 147 gccatggctcagatcttgctccatgggaacctccacgtcaccatcttcgaggcctcgtcg 206 |||||||| ||||| |||||||||||| || |||| ||||||||||||||| ||||| Sbjct: 180 gccatggcgcagatgctgctccatgggacgctgcacgccaccatcttcgaggcggcgtcg 239 Query: 207 ctctcccaccccggccgcgccagcggcggcgcccccaagttcatccgcaagtttgtggag 266 |||||| |||| |||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 240 ctctccaacccgcaccgcgccagcggaagcgcccccaagttcatccgcaagtttgtggag 299 Query: 267 gggattgaagacaccgtcggtgtcggcaaaggcacctccaagctatatgccaccattgat 326 |||||||| ||||| || ||||||||||||||| || ||||| | ||| | ||||||||| Sbjct: 300 gggattgaggacactgtgggtgtcggcaaaggcgccaccaaggtgtattctaccattgat 359 Query: 327 cttgagagaactcgtgttgggcgtaccaggatgctgagncacgagcctgtcaaccctcgc 386 || |||| | ||||||| ||||| || |||||| | | | ||||| ||||||||||| Sbjct: 360 ctggagaaagctcgtgtagggcgaactaggatgataaccaatgagcccatcaaccctcgc 419 Query: 387 tggtacgagcctttccaca 405 ||||| ||| | ||||||| Sbjct: 420 tggtatgagtcgttccaca 438
>dbj|AK065102.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001N03, full insert sequence Length = 2851 Score = 190 bits (96), Expect = 2e-45 Identities = 218/259 (84%) Strand = Plus / Plus Query: 147 gccatggctcagatcttgctccatgggaacctccacgtcaccatcttcgaggcctcgtcg 206 |||||||| ||||| |||||||||||| || |||| ||||||||||||||| ||||| Sbjct: 111 gccatggcgcagatgctgctccatgggacgctgcacgccaccatcttcgaggcggcgtcg 170 Query: 207 ctctcccaccccggccgcgccagcggcggcgcccccaagttcatccgcaagtttgtggag 266 |||||| |||| |||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 171 ctctccaacccgcaccgcgccagcggaagcgcccccaagttcatccgcaagtttgtggag 230 Query: 267 gggattgaagacaccgtcggtgtcggcaaaggcacctccaagctatatgccaccattgat 326 |||||||| ||||| || ||||||||||||||| || ||||| | ||| | ||||||||| Sbjct: 231 gggattgaggacactgtgggtgtcggcaaaggcgccaccaaggtgtattctaccattgat 290 Query: 327 cttgagagaactcgtgttgggcgtaccaggatgctgagncacgagcctgtcaaccctcgc 386 || |||| | ||||||| ||||| || |||||| | | | ||||| ||||||||||| Sbjct: 291 ctggagaaagctcgtgtagggcgaactaggatgataaccaatgagcccatcaaccctcgc 350 Query: 387 tggtacgagcctttccaca 405 ||||| ||| | ||||||| Sbjct: 351 tggtatgagtcgttccaca 369
>dbj|D73411.1|RICPHD2 Oryza sativa (japonica cultivar-group) mRNA for phospholipase D, complete cds Length = 2990 Score = 190 bits (96), Expect = 2e-45 Identities = 218/259 (84%) Strand = Plus / Plus Query: 147 gccatggctcagatcttgctccatgggaacctccacgtcaccatcttcgaggcctcgtcg 206 |||||||| ||||| |||||||||||| || |||| ||||||||||||||| ||||| Sbjct: 179 gccatggcgcagatgctgctccatgggacgctgcacgccaccatcttcgaggcggcgtcg 238 Query: 207 ctctcccaccccggccgcgccagcggcggcgcccccaagttcatccgcaagtttgtggag 266 |||||| |||| |||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 239 ctctccaacccgcaccgcgccagcggaagcgcccccaagttcatccgcaagtttgtggag 298 Query: 267 gggattgaagacaccgtcggtgtcggcaaaggcacctccaagctatatgccaccattgat 326 |||||||| ||||| || ||||||||||||||| || ||||| | ||| | ||||||||| Sbjct: 299 gggattgaggacactgtgggtgtcggcaaaggcgccaccaaggtgtattctaccattgat 358 Query: 327 cttgagagaactcgtgttgggcgtaccaggatgctgagncacgagcctgtcaaccctcgc 386 || |||| | ||||||| ||||| || |||||| | | | ||||| ||||||||||| Sbjct: 359 ctggagaaagctcgtgtagggcgaactaggatgataaccaatgagcccatcaaccctcgc 418 Query: 387 tggtacgagcctttccaca 405 ||||| ||| | ||||||| Sbjct: 419 tggtatgagtcgttccaca 437
>dbj|D73410.1|MZEPHD1 Zea mays mRNA for phospholipase D, complete cds Length = 2793 Score = 174 bits (88), Expect = 1e-40 Identities = 216/259 (83%) Strand = Plus / Plus Query: 147 gccatggctcagatcttgctccatgggaacctccacgtcaccatcttcgaggcctcgtcg 206 ||||||||||||||||||||||| || | ||||||| |||||||||||||||| |||| Sbjct: 104 gccatggctcagatcttgctccacggcacgctccacgccaccatcttcgaggccgagtcg 163 Query: 207 ctctcccaccccggccgcgccagcggcggcgcccccaagttcatccgcaagtttgtggag 266 |||||| |||| |||||||| ||||||||||||||||||||||||||| ||||||| Sbjct: 164 ctctccaacccgcaccgcgccactggcggcgcccccaagttcatccgcaagcttgtggaa 223 Query: 267 gggattgaagacaccgtcggtgtcggcaaaggcacctccaagctatatgccaccattgat 326 ||||| || |||||||| ||||||||||| ||| || ||||| ||||||||||| | ||| Sbjct: 224 gggatcgaggacaccgtgggtgtcggcaagggcgccaccaagatatatgccaccgtcgat 283 Query: 327 cttgagagaactcgtgttgggcgtaccaggatgctgagncacgagcctgtcaaccctcgc 386 || |||| | ||||| ||||| ||| ||||| | ||||||| || |||||||| Sbjct: 284 ctcgagaaggcccgtgtcgggcggacccggatgatctccaacgagcccgtgaaccctcgt 343 Query: 387 tggtacgagcctttccaca 405 ||||||||| | ||||||| Sbjct: 344 tggtacgagtccttccaca 362
>gb|AY109642.1| Zea mays CL1830_1 mRNA sequence Length = 2876 Score = 139 bits (70), Expect = 8e-30 Identities = 208/256 (81%) Strand = Plus / Plus Query: 150 atggctcagatcttgctccatgggaacctccacgtcaccatcttcgaggcctcgtcgctc 209 |||||||||||||||||||| || | ||||||| |||||||||||||||| ||||||| Sbjct: 107 atggctcagatcttgctccacggcacgctccacgccaccatcttcgaggccgagtcgctc 166 Query: 210 tcccaccccggccgcgccagcggcggcgcccccaagttcatccgcaagtttgtggagggg 269 ||| |||| |||||||| ||||||| ||||||||||||||| ||||||| ||| Sbjct: 167 tccaacccgcaccgcgccactggcggcgnnnnnaagttcatccgcaagcttgtggaaggg 226 Query: 270 attgaagacaccgtcggtgtcggcaaaggcacctccaagctatatgccaccattgatctt 329 || || |||||||| ||||||||||| ||| || ||||| ||||||||||| | ||||| Sbjct: 227 atcgaggacaccgtgggtgtcggcaagggcgccaccaagatatatgccaccgtcgatctc 286 Query: 330 gagagaactcgtgttgggcgtaccaggatgctgagncacgagcctgtcaaccctcgctgg 389 |||| | ||||| ||||| ||| ||||| | ||||||| || |||||||| ||| Sbjct: 287 gagaaggcccgtgtcgggcggacccggatgatctccaacgagcccgtgaaccctcgttgg 346 Query: 390 tacgagcctttccaca 405 |||||| | ||||||| Sbjct: 347 tacgagtccttccaca 362
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 101 bits (51), Expect = 2e-18 Identities = 96/111 (86%) Strand = Plus / Minus Query: 147 gccatggctcagatcttgctccatgggaacctccacgtcaccatcttcgaggcctcgtcg 206 |||||||| ||||| |||||||||||| || |||| ||||||||||||||| ||||| Sbjct: 3727442 gccatggcgcagatgctgctccatgggacgctgcacgccaccatcttcgaggcggcgtcg 3727383 Query: 207 ctctcccaccccggccgcgccagcggcggcgcccccaagttcatccgcaag 257 |||||| |||| |||||||||||| ||||||||||||||||||||||| Sbjct: 3727382 ctctccaacccgcaccgcgccagcggaagcgcccccaagttcatccgcaag 3727332 Score = 93.7 bits (47), Expect = 4e-16 Identities = 124/150 (82%) Strand = Plus / Minus Query: 256 agtttgtggaggggattgaagacaccgtcggtgtcggcaaaggcacctccaagctatatg 315 ||||||||||||||||||| ||||| || ||||||||||||||| || ||||| | ||| Sbjct: 3726793 agtttgtggaggggattgaggacactgtgggtgtcggcaaaggcgccaccaaggtgtatt 3726734 Query: 316 ccaccattgatcttgagagaactcgtgttgggcgtaccaggatgctgagncacgagcctg 375 | ||||||||||| |||| | ||||||| ||||| || |||||| | | | ||||| Sbjct: 3726733 ctaccattgatctggagaaagctcgtgtagggcgaactaggatgataaccaatgagccca 3726674 Query: 376 tcaaccctcgctggtacgagcctttccaca 405 |||||||||||||||| ||| | ||||||| Sbjct: 3726673 tcaaccctcgctggtatgagtcgttccaca 3726644
>dbj|AP003215.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0089K24 Length = 154137 Score = 101 bits (51), Expect = 2e-18 Identities = 96/111 (86%) Strand = Plus / Minus Query: 147 gccatggctcagatcttgctccatgggaacctccacgtcaccatcttcgaggcctcgtcg 206 |||||||| ||||| |||||||||||| || |||| ||||||||||||||| ||||| Sbjct: 984 gccatggcgcagatgctgctccatgggacgctgcacgccaccatcttcgaggcggcgtcg 925 Query: 207 ctctcccaccccggccgcgccagcggcggcgcccccaagttcatccgcaag 257 |||||| |||| |||||||||||| ||||||||||||||||||||||| Sbjct: 924 ctctccaacccgcaccgcgccagcggaagcgcccccaagttcatccgcaag 874 Score = 93.7 bits (47), Expect = 4e-16 Identities = 124/150 (82%) Strand = Plus / Minus Query: 256 agtttgtggaggggattgaagacaccgtcggtgtcggcaaaggcacctccaagctatatg 315 ||||||||||||||||||| ||||| || ||||||||||||||| || ||||| | ||| Sbjct: 335 agtttgtggaggggattgaggacactgtgggtgtcggcaaaggcgccaccaaggtgtatt 276 Query: 316 ccaccattgatcttgagagaactcgtgttgggcgtaccaggatgctgagncacgagcctg 375 | ||||||||||| |||| | ||||||| ||||| || |||||| | | | ||||| Sbjct: 275 ctaccattgatctggagaaagctcgtgtagggcgaactaggatgataaccaatgagccca 216 Query: 376 tcaaccctcgctggtacgagcctttccaca 405 |||||||||||||||| ||| | ||||||| Sbjct: 215 tcaaccctcgctggtatgagtcgttccaca 186
>dbj|AB001920.1| Oryza sativa (japonica cultivar-group) gene for phospholipase D, complete cds Length = 5871 Score = 101 bits (51), Expect = 2e-18 Identities = 96/111 (86%) Strand = Plus / Plus Query: 147 gccatggctcagatcttgctccatgggaacctccacgtcaccatcttcgaggcctcgtcg 206 |||||||| ||||| |||||||||||| || |||| ||||||||||||||| ||||| Sbjct: 1873 gccatggcgcagatgctgctccatgggacgctgcacgccaccatcttcgaggcggcgtcg 1932 Query: 207 ctctcccaccccggccgcgccagcggcggcgcccccaagttcatccgcaag 257 |||||| |||| |||||||||||| ||||||||||||||||||||||| Sbjct: 1933 ctctccaacccgcaccgcgccagcggaagcgcccccaagttcatccgcaag 1983 Score = 93.7 bits (47), Expect = 4e-16 Identities = 124/150 (82%) Strand = Plus / Plus Query: 256 agtttgtggaggggattgaagacaccgtcggtgtcggcaaaggcacctccaagctatatg 315 ||||||||||||||||||| ||||| || ||||||||||||||| || ||||| | ||| Sbjct: 2522 agtttgtggaggggattgaggacactgtgggtgtcggcaaaggcgccaccaaggtgtatt 2581 Query: 316 ccaccattgatcttgagagaactcgtgttgggcgtaccaggatgctgagncacgagcctg 375 | ||||||||||| |||| | ||||||| ||||| || |||||| | | | ||||| Sbjct: 2582 ctaccattgatctggagaaagctcgtgtagggcgaactaggatgataaccaatgagccca 2641 Query: 376 tcaaccctcgctggtacgagcctttccaca 405 |||||||||||||||| ||| | ||||||| Sbjct: 2642 tcaaccctcgctggtatgagtcgttccaca 2671
>dbj|AP003282.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0583G08 Length = 135295 Score = 93.7 bits (47), Expect = 4e-16 Identities = 124/150 (82%) Strand = Plus / Minus Query: 256 agtttgtggaggggattgaagacaccgtcggtgtcggcaaaggcacctccaagctatatg 315 ||||||||||||||||||| ||||| || ||||||||||||||| || ||||| | ||| Sbjct: 135273 agtttgtggaggggattgaggacactgtgggtgtcggcaaaggcgccaccaaggtgtatt 135214 Query: 316 ccaccattgatcttgagagaactcgtgttgggcgtaccaggatgctgagncacgagcctg 375 | ||||||||||| |||| | ||||||| ||||| || |||||| | | | ||||| Sbjct: 135213 ctaccattgatctggagaaagctcgtgtagggcgaactaggatgataaccaatgagccca 135154 Query: 376 tcaaccctcgctggtacgagcctttccaca 405 |||||||||||||||| ||| | ||||||| Sbjct: 135153 tcaaccctcgctggtatgagtcgttccaca 135124
>gb|AC087553.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0685E10, complete sequence Length = 156772 Score = 46.1 bits (23), Expect = 0.088 Identities = 38/43 (88%) Strand = Plus / Minus Query: 157 agatcttgctccatgggaacctccacgtcaccatcttcgaggc 199 ||||| |||||||||||| | |||||||||||||||||||| Sbjct: 87489 agatcctgctccatgggacgatgcacgtcaccatcttcgaggc 87447
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 46.1 bits (23), Expect = 0.088 Identities = 38/43 (88%) Strand = Plus / Minus Query: 157 agatcttgctccatgggaacctccacgtcaccatcttcgaggc 199 ||||| |||||||||||| | |||||||||||||||||||| Sbjct: 4201010 agatcctgctccatgggacgatgcacgtcaccatcttcgaggc 4200968
>gb|AC146423.3| Pan troglodytes BAC clone RP43-25L18 from 7, complete sequence Length = 158864 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 91 gcggtggtggtggtggcaggtg 112 |||||||||||||||||||||| Sbjct: 721 gcggtggtggtggtggcaggtg 700
>gb|AC148833.5| Pan troglodytes BAC clone CH251-55M19 from chromosome 7, complete sequence Length = 206418 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 91 gcggtggtggtggtggcaggtg 112 |||||||||||||||||||||| Sbjct: 47786 gcggtggtggtggtggcaggtg 47765
>gb|AC005535.2| Homo sapiens PAC clone RP5-1168M19 from 7, complete sequence Length = 157813 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 91 gcggtggtggtggtggcaggtg 112 |||||||||||||||||||||| Sbjct: 109312 gcggtggtggtggtggcaggtg 109291
>gb|AC104609.10| Drosophila melanogaster X BAC RP98-39F18 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 165014 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 85 tcatcagcggtggtggtggtgg 106 |||||||||||||||||||||| Sbjct: 99471 tcatcagcggtggtggtggtgg 99492
>tpg|BK003074.1| TPA: TPA_inf: Drosophila melanogaster HDC17962 (HDC17962) gene, complete cds Length = 10940 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 85 tcatcagcggtggtggtggtgg 106 |||||||||||||||||||||| Sbjct: 7590 tcatcagcggtggtggtggtgg 7611
>dbj|AP006619.1| Nocardia farcinica IFM 10152 plasmid pNF1 DNA, complete sequence Length = 184026 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 218 cggccgcgccagcggcggcgcc 239 |||||||||||||||||||||| Sbjct: 172825 cggccgcgccagcggcggcgcc 172846
>gb|AC127373.3| Mus musculus BAC clone RP23-42M8 from 6, complete sequence Length = 233833 Score = 44.1 bits (22), Expect = 0.35 Identities = 32/34 (94%), Gaps = 1/34 (2%) Strand = Plus / Minus Query: 38 cctccctccctcccgttcgtctccctcttcctct 71 ||||||||||||| |||| ||||||||||||||| Sbjct: 63628 cctccctccctcc-gttcctctccctcttcctct 63596
>gb|AE003443.2| Drosophila melanogaster chromosome X, section 27 of 74 of the complete sequence Length = 299153 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 85 tcatcagcggtggtggtggtgg 106 |||||||||||||||||||||| Sbjct: 93576 tcatcagcggtggtggtggtgg 93597
>gb|AC173480.1| Mus musculus BAC clone RP23-422D12 from chromosome 6, complete sequence Length = 185966 Score = 44.1 bits (22), Expect = 0.35 Identities = 32/34 (94%), Gaps = 1/34 (2%) Strand = Plus / Minus Query: 38 cctccctccctcccgttcgtctccctcttcctct 71 ||||||||||||| |||| ||||||||||||||| Sbjct: 175262 cctccctccctcc-gttcctctccctcttcctct 175230
>emb|AL670951.6| Mouse DNA sequence from clone RP23-6N18 on chromosome 2, complete sequence Length = 207571 Score = 44.1 bits (22), Expect = 0.35 Identities = 32/34 (94%), Gaps = 1/34 (2%) Strand = Plus / Minus Query: 38 cctccctccctcccgttcgtctccctcttcctct 71 |||||||||||||| ||| ||||||||||||||| Sbjct: 152866 cctccctccctccc-ttcctctccctcttcctct 152834
>gb|AC124828.14| Mus musculus chromosome 5, clone RP24-126A19, complete sequence Length = 188504 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 31 ggatctgcctccctccctccc 51 ||||||||||||||||||||| Sbjct: 185225 ggatctgcctccctccctccc 185205
>ref|XM_507958.1| PREDICTED: Pan troglodytes similar to KIAA0690 (LOC450649), mRNA Length = 4270 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 241 ccaagttcatccgcaagtttg 261 ||||||||||||||||||||| Sbjct: 3449 ccaagttcatccgcaagtttg 3469
>ref|XM_508018.1| PREDICTED: Pan troglodytes similar to autoantigen (LOC450717), mRNA Length = 5252 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 89 cagcggtggtggtggtggcag 109 ||||||||||||||||||||| Sbjct: 1647 cagcggtggtggtggtggcag 1667
>ref|NM_185817.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1419 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 220 gccgcgccagcggcggcgccc 240 ||||||||||||||||||||| Sbjct: 833 gccgcgccagcggcggcgccc 813
>ref|XM_607428.2| PREDICTED: Bos taurus similar to Protein KIAA0690 (LOC528990), partial mRNA Length = 3832 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 241 ccaagttcatccgcaagtttg 261 ||||||||||||||||||||| Sbjct: 3347 ccaagttcatccgcaagtttg 3367
>ref|XM_462004.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0G11539g) partial mRNA Length = 1860 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 240 cccaagttcatccgcaagttt 260 ||||||||||||||||||||| Sbjct: 358 cccaagttcatccgcaagttt 378
>gb|BC012745.2| Homo sapiens KIAA0690, mRNA (cDNA clone MGC:15361 IMAGE:4025242), complete cds Length = 4387 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 241 ccaagttcatccgcaagtttg 261 ||||||||||||||||||||| Sbjct: 3103 ccaagttcatccgcaagtttg 3123
>ref|XM_323394.1| Neurospora crassa OR74A hypothetical protein (NCU04076.1) partial mRNA Length = 3933 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 6 tgcagttgtatatcaccgccc 26 ||||||||||||||||||||| Sbjct: 3745 tgcagttgtatatcaccgccc 3725
>ref|XM_952598.1| Neurospora crassa OR74A hypothetical protein (NCU04076.1) partial mRNA Length = 3933 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 6 tgcagttgtatatcaccgccc 26 ||||||||||||||||||||| Sbjct: 3745 tgcagttgtatatcaccgccc 3725
>ref|NM_015179.2| Homo sapiens KIAA0690 (KIAA0690), mRNA Length = 4387 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 241 ccaagttcatccgcaagtttg 261 ||||||||||||||||||||| Sbjct: 3103 ccaagttcatccgcaagtttg 3123
>ref|XM_990655.1| PREDICTED: Mus musculus RIKEN cDNA B430201A12 gene, transcript variant 1 (B430201A12Rik), mRNA Length = 5410 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 79 tcctcttcatcagcggtggtggtggtggc 107 |||||||| | |||||||||||||||||| Sbjct: 845 tcctcttccttagcggtggtggtggtggc 817
>ref|XM_990687.1| PREDICTED: Mus musculus RIKEN cDNA B430201A12 gene, transcript variant 2 (B430201A12Rik), mRNA Length = 5416 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 79 tcctcttcatcagcggtggtggtggtggc 107 |||||||| | |||||||||||||||||| Sbjct: 851 tcctcttccttagcggtggtggtggtggc 823
>ref|XM_974847.1| PREDICTED: Mus musculus RIKEN cDNA B430201A12 gene (B430201A12Rik), mRNA Length = 5413 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 79 tcctcttcatcagcggtggtggtggtggc 107 |||||||| | |||||||||||||||||| Sbjct: 848 tcctcttccttagcggtggtggtggtggc 820
>ref|XM_283903.5| PREDICTED: Mus musculus RIKEN cDNA B430201A12 gene (B430201A12Rik), mRNA Length = 6040 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 79 tcctcttcatcagcggtggtggtggtggc 107 |||||||| | |||||||||||||||||| Sbjct: 1475 tcctcttccttagcggtggtggtggtggc 1447
>ref|XM_753317.1| Ustilago maydis 521 hypothetical protein (UM02263.1) partial mRNA Length = 909 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 207 ctctcccaccccggccgcgcc 227 ||||||||||||||||||||| Sbjct: 535 ctctcccaccccggccgcgcc 555
>ref|XM_807128.1| Trypanosoma cruzi strain CL Brener CYC2-like cyclin 4 (Tc00.1047053506791.10) partial mRNA Length = 2490 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 89 cagcggtggtggtggtggcag 109 ||||||||||||||||||||| Sbjct: 2334 cagcggtggtggtggtggcag 2354
>gb|BC020331.1| Mus musculus DEAH (Asp-Glu-Ala-His) box polypeptide 29, mRNA (cDNA clone IMAGE:3987740) Length = 2837 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 93 ggtggtggtggtggcaggtga 113 ||||||||||||||||||||| Sbjct: 1860 ggtggtggtggtggcaggtga 1880
>emb|AL355490.24| Human DNA sequence from clone RP11-452K12 on chromosome 10 Contains the FRAT1 gene for frequently rearranged in advanced T-cell lymphomas, the FRAT2 gene for frequently rearranged in advanced T-cell lymphomas 2, two novel genes, the gene for a novel protein (FLJ12434,KIAA0690), the PGAM1 gene for phosphoglycerate mutase 1 (brain), the CSL4 gene for exosomal core protein CSL4, the ZDHHC16 gene for zinc finger, DHHC domain containing 16, the 3' end of the MMS19L gene for MMS19-like (MET18 homolog, S. cerevisiae), a ribosomal protein L12 (RPL12) pseudogene, a ribosomal protein L34 (RPL34) pseudogene and four CpG islands, complete sequence Length = 190803 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 241 ccaagttcatccgcaagtttg 261 ||||||||||||||||||||| Sbjct: 68939 ccaagttcatccgcaagtttg 68919
>emb|CR382139.1| Debaryomyces hansenii chromosome G of strain CBS767 of Debaryomyces hansenii Length = 2051428 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 240 cccaagttcatccgcaagttt 260 ||||||||||||||||||||| Sbjct: 901244 cccaagttcatccgcaagttt 901264
>gb|AF492579.1| Anisocarpus madioides clone ANm2a GIA/RGA-like gibberellin response modulator (GAI) gene, partial cds Length = 1960 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 85 tcatcagcggtggtggtggtg 105 ||||||||||||||||||||| Sbjct: 1091 tcatcagcggtggtggtggtg 1071
>emb|AL596182.28| Mouse DNA sequence from clone RP23-303F24 on chromosome 11 Contains a pseudogene similar to part of glyceraldehyde-3-phosphate dehydrogenase (Gapd), the Irf1 gene for interferon regulatory factor 1, a novel gene, the Slc22a5 gene for solute carrier family 22 (organic cation transporter) member 5, a ribosomal protein L27a (Rpl27a) pseudogene, a cyclin-dependent kinase 4 (Cdk4) pseudogene and two CpG islands, complete sequence Length = 191494 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 57 tctccctcttcctcttgtctt 77 ||||||||||||||||||||| Sbjct: 151856 tctccctcttcctcttgtctt 151876
>emb|AL832924.1|HSM804235 Homo sapiens mRNA; cDNA DKFZp762P1116 (from clone DKFZp762P1116) Length = 3291 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 241 ccaagttcatccgcaagtttg 261 ||||||||||||||||||||| Sbjct: 2011 ccaagttcatccgcaagtttg 2031
>dbj|AK131283.1| Homo sapiens cDNA FLJ16235 fis, clone FEBRA2028516 Length = 3501 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 241 ccaagttcatccgcaagtttg 261 ||||||||||||||||||||| Sbjct: 2241 ccaagttcatccgcaagtttg 2261
>dbj|AK056614.1| Homo sapiens cDNA FLJ32052 fis, clone NTONG2001532, weakly similar to NEUROFILAMENT TRIPLET M PROTEIN Length = 1919 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 241 ccaagttcatccgcaagtttg 261 ||||||||||||||||||||| Sbjct: 315 ccaagttcatccgcaagtttg 335
>dbj|AK022496.1| Homo sapiens cDNA FLJ12434 fis, clone NT2RM1000037, highly similar to Homo sapiens mRNA for KIAA0690 protein Length = 4396 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 241 ccaagttcatccgcaagtttg 261 ||||||||||||||||||||| Sbjct: 3136 ccaagttcatccgcaagtttg 3156
>dbj|AK021460.1| Homo sapiens cDNA FLJ11398 fis, clone HEMBA1000637 Length = 2490 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 241 ccaagttcatccgcaagtttg 261 ||||||||||||||||||||| Sbjct: 1882 ccaagttcatccgcaagtttg 1902
>emb|BX296554.9| Zebrafish DNA sequence from clone DKEYP-30G1 in linkage group 5, complete sequence Length = 126703 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 57 tctccctcttcctcttgtctt 77 ||||||||||||||||||||| Sbjct: 99096 tctccctcttcctcttgtctt 99116
>dbj|AK046595.1| Mus musculus 4 days neonate male adipose cDNA, RIKEN full-length enriched library, clone:B430201A12 product:weakly similar to RE17452P [Drosophila melanogaster], full insert sequence Length = 2493 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 79 tcctcttcatcagcggtggtggtggtggc 107 |||||||| | |||||||||||||||||| Sbjct: 803 tcctcttccttagcggtggtggtggtggc 775
>gb|AF237588.1|AF237588 Trypanosoma cruzi cyclin 4 (cyc4) gene, complete cds Length = 2391 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 89 cagcggtggtggtggtggcag 109 ||||||||||||||||||||| Sbjct: 2297 cagcggtggtggtggtggcag 2317
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 220 gccgcgccagcggcggcgccc 240 ||||||||||||||||||||| Sbjct: 22490454 gccgcgccagcggcggcgccc 22490474
>dbj|AP005296.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1720_F04 Length = 105227 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 220 gccgcgccagcggcggcgccc 240 ||||||||||||||||||||| Sbjct: 33942 gccgcgccagcggcggcgccc 33962
>dbj|AK106307.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-C11, full insert sequence Length = 1419 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 220 gccgcgccagcggcggcgccc 240 ||||||||||||||||||||| Sbjct: 833 gccgcgccagcggcggcgccc 813
>emb|AL513345.20| Mouse DNA sequence from clone RP23-129N7 on chromosome 15, complete sequence Length = 217225 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 31 ggatctgcctccctccctccc 51 ||||||||||||||||||||| Sbjct: 40387 ggatctgcctccctccctccc 40367
>emb|AL671894.20| Mouse DNA sequence from clone RP23-316M11 on chromosome 3, complete sequence Length = 194209 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 79 tcctcttcatcagcggtggtggtggtggc 107 |||||||| | |||||||||||||||||| Sbjct: 150994 tcctcttccttagcggtggtggtggtggc 151022
>dbj|AB014590.1| Homo sapiens mRNA for KIAA0690 protein, partial cds Length = 4038 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 241 ccaagttcatccgcaagtttg 261 ||||||||||||||||||||| Sbjct: 2778 ccaagttcatccgcaagtttg 2798
>ref|NM_125836.2| Arabidopsis thaliana unknown protein AT5G64400 transcript variant AT5G64400.1 mRNA, complete cds Length = 700 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 cagcggtggtggtggtggca 108 |||||||||||||||||||| Sbjct: 172 cagcggtggtggtggtggca 191
>ref|NM_001037060.1| Arabidopsis thaliana unknown protein AT5G64400 transcript variant AT5G64400.2 mRNA, complete cds Length = 980 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 cagcggtggtggtggtggca 108 |||||||||||||||||||| Sbjct: 196 cagcggtggtggtggtggca 215
>gb|AC159266.3| Mus musculus BAC clone RP24-64D24 from chromosome 8, complete sequence Length = 212727 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 gatctgcctccctccctccc 51 |||||||||||||||||||| Sbjct: 129903 gatctgcctccctccctccc 129884
>ref|XM_472858.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1182 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 gcggtggtggtggtggcagg 110 |||||||||||||||||||| Sbjct: 217 gcggtggtggtggtggcagg 236
>gb|AF030453.1| Homo sapiens chromosome 7 clone PAC 76h2 map 7q22, complete sequence Length = 125108 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 ggtggtggtggtggcaggtg 112 |||||||||||||||||||| Sbjct: 55985 ggtggtggtggtggcaggtg 56004
>gb|AC120307.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0074E19 map R1938, complete sequence Length = 160847 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 cggccgcgccagcggcggcg 237 |||||||||||||||||||| Sbjct: 119039 cggccgcgccagcggcggcg 119020
>gb|AC149230.2| Pan troglodytes BAC clone CH251-557H16 from 7, complete sequence Length = 157879 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 ggtggcaggtgactcgtagg 121 |||||||||||||||||||| Sbjct: 146574 ggtggcaggtgactcgtagg 146593
>gb|AC091473.2| Mus musculus chromosome X clones RP21-114F21, RP21-430D6 complete sequence Length = 221860 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 155 tcagatcttgctccatggga 174 |||||||||||||||||||| Sbjct: 171301 tcagatcttgctccatggga 171320
>ref|XM_421399.1| PREDICTED: Gallus gallus similar to expressed sequence AI132321 (LOC423496), mRNA Length = 1878 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 cagctgcagttgtatatcac 21 |||||||||||||||||||| Sbjct: 1025 cagctgcagttgtatatcac 1006
>gb|AC148336.4| Mus musculus BAC clone RP23-21J15 from chromosome 18, complete sequence Length = 238060 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 93 ggtggtggtggtggcaggtgactc 116 |||||||||||||||||| ||||| Sbjct: 41777 ggtggtggtggtggcaggggactc 41800
>gb|BC054001.1| Homo sapiens olfactomedin-like 2A, mRNA (cDNA clone MGC:61796 IMAGE:5554812), complete cds Length = 5983 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 gcggtggtggtggtggcagg 110 |||||||||||||||||||| Sbjct: 626 gcggtggtggtggtggcagg 607
>gb|AC146382.4| Pan troglodytes BAC clone RP43-112E23 from 7, complete sequence Length = 181957 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 caaaggcacctccaagctat 312 |||||||||||||||||||| Sbjct: 117379 caaaggcacctccaagctat 117360
>ref|NM_182487.1| Homo sapiens olfactomedin-like 2A (OLFML2A), mRNA Length = 5983 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 gcggtggtggtggtggcagg 110 |||||||||||||||||||| Sbjct: 626 gcggtggtggtggtggcagg 607
>gb|AC073101.7| Homo sapiens BAC clone RP11-445E22 from 7, complete sequence Length = 96699 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 ggtggcaggtgactcgtagg 121 |||||||||||||||||||| Sbjct: 38934 ggtggcaggtgactcgtagg 38953
>gb|AC005088.3| Homo sapiens BAC clone CTA-313A17 from 7, complete sequence Length = 158663 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 ggtggtggtggtggcaggtg 112 |||||||||||||||||||| Sbjct: 90420 ggtggtggtggtggcaggtg 90439
>ref|XM_751234.1| Ustilago maydis 521 hypothetical protein (UM00180.1) partial mRNA Length = 1506 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 ggtggtggtggtggcaggtg 112 |||||||||||||||||||| Sbjct: 1050 ggtggtggtggtggcaggtg 1031
>gb|AC121802.3| Mus musculus BAC clone RP23-434N18 from chromosome 18, complete sequence Length = 187787 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 93 ggtggtggtggtggcaggtgactc 116 |||||||||||||||||| ||||| Sbjct: 109096 ggtggtggtggtggcaggggactc 109119
>gb|AC145919.3| Pan troglodytes BAC clone RP43-10A14 from 7, complete sequence Length = 174235 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 ggtggtggtggtggcaggtg 112 |||||||||||||||||||| Sbjct: 173522 ggtggtggtggtggcaggtg 173541
>gb|AY358185.1| Homo sapiens clone DNA213524 olfactomedin-like (UNQ9394) mRNA, complete cds Length = 2239 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 gcggtggtggtggtggcagg 110 |||||||||||||||||||| Sbjct: 1025 gcggtggtggtggtggcagg 1006
>gb|AC144510.1| Pan troglodytes BAC clone RP43-18C13 from 7, complete sequence Length = 161048 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 caaaggcacctccaagctat 312 |||||||||||||||||||| Sbjct: 38403 caaaggcacctccaagctat 38384
>gb|AC091763.25| Mus musculus strain C57BL/6J clone rp23-198o2 map 10, complete sequence Length = 221545 Score = 40.1 bits (20), Expect = 5.4 Identities = 35/40 (87%) Strand = Plus / Plus Query: 32 gatctgcctccctccctcccgttcgtctccctcttcctct 71 |||||||||| ||||||||| ||| || ||||||||||| Sbjct: 8504 gatctgcctctctccctccccttctacttcctcttcctct 8543
>emb|BX855598.22| Zebrafish DNA sequence from clone DKEY-52J13 in linkage group 13, complete sequence Length = 209449 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 tctgcctccctccctcccgt 53 |||||||||||||||||||| Sbjct: 33875 tctgcctccctccctcccgt 33856
>emb|AL365190.16| Human DNA sequence from clone RP11-512H14 on chromosome 9 Contains the 5' end of the TLE1 gene for transducin-like enhancer of split 1 (E(sp1) homolog, Drosophila) (ESG, GRG1), the 5' end of a novel gene and two CpG isalnds, complete sequence Length = 89468 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 ggtggtggtggtggcaggtg 112 |||||||||||||||||||| Sbjct: 80910 ggtggtggtggtggcaggtg 80929
>emb|AL354928.9| Human DNA sequence from clone RP11-175D17 on chromosome 9 Contains the 5' end of the NR6A1 gene for nuclear receptor (subfamily 6, group A) member 1, three novel genes, the RPL35 gene for ribosomal protein L35, the gene for a hypothetical protein similar to actin related protein 2/3 complex subunit 5 (MGC3038), the 3' end of the GOLGA1 gene for golgi autoantigen (golgin subfamily a, 1) and six CpG islands, complete sequence Length = 176539 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 gcggtggtggtggtggcagg 110 |||||||||||||||||||| Sbjct: 64136 gcggtggtggtggtggcagg 64117
>emb|AL160278.24| Human DNA sequence from clone RP11-574G7 on chromosome 9 Contains the 5' end of the GNAQ gene for guanine nucleotide binding protein (G protein) q polypeptide and a CpG island, complete sequence Length = 215399 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 ggtggtggtggtggcaggtg 112 |||||||||||||||||||| Sbjct: 145386 ggtggtggtggtggcaggtg 145367
>gb|AC040970.7| Homo sapiens chromosome 8, clone RP11-809O17, complete sequence Length = 183894 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 54 tcgtctccctcttcctcttgtctt 77 |||||||| ||||||||||||||| Sbjct: 77782 tcgtctccgtcttcctcttgtctt 77759
>emb|BX056713.1|CNS09FX9 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC36AH06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 858 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 gcggtggtggtggtggcagg 110 |||||||||||||||||||| Sbjct: 133 gcggtggtggtggtggcagg 114
>emb|BX056166.1|CNS09FI2 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC35BC01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 382 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 gcggtggtggtggtggcagg 110 |||||||||||||||||||| Sbjct: 134 gcggtggtggtggtggcagg 115
>gb|AC130187.4| Atelerix albiventris clone LB4-344F17, complete sequence Length = 150117 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 39 ctccctccctcccgttcgtctccctcttcctc 70 ||||||||||||| ||| ||| |||||||||| Sbjct: 55973 ctccctccctccctttcttcttcctcttcctc 56004
>gb|AY063045.1| Arabidopsis thaliana unknown protein (At5g64400) mRNA, complete cds Length = 466 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 cagcggtggtggtggtggca 108 |||||||||||||||||||| Sbjct: 114 cagcggtggtggtggtggca 133
>gb|AY034898.1| Arabidopsis thaliana unknown protein (At5g64400) mRNA, complete cds Length = 646 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 cagcggtggtggtggtggca 108 |||||||||||||||||||| Sbjct: 174 cagcggtggtggtggtggca 193
>emb|AL731582.2|OSJN00232 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0022H21, complete sequence Length = 160155 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 gcggtggtggtggtggcagg 110 |||||||||||||||||||| Sbjct: 80058 gcggtggtggtggtggcagg 80077
>gb|AC155101.19| Medicago truncatula clone mth2-139j13, complete sequence Length = 124152 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 cggtggtggtggtggcaggt 111 |||||||||||||||||||| Sbjct: 31979 cggtggtggtggtggcaggt 31998
>gb|AC008180.15| Homo sapiens 3 BAC RP11-292L5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 193035 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 88 tcagcggtggtggtggtggcaggt 111 ||||| |||||||||||||||||| Sbjct: 2009 tcagctgtggtggtggtggcaggt 2032
>ref|NM_132780.1| Drosophila melanogaster CG15029-RA (CG15029), mRNA Length = 1920 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 gcggtggtggtggtggcagg 110 |||||||||||||||||||| Sbjct: 1654 gcggtggtggtggtggcagg 1635
>gb|DP000003.1| Atelerix albiventris target 1 genomic scaffold Length = 2136267 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 39 ctccctccctcccgttcgtctccctcttcctc 70 ||||||||||||| ||| ||| |||||||||| Sbjct: 1743254 ctccctccctccctttcttcttcctcttcctc 1743285
>gb|AC016954.43| Homo sapiens 12 BAC RP11-956A19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 190195 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 tgcctccctccctcccgttc 55 |||||||||||||||||||| Sbjct: 86513 tgcctccctccctcccgttc 86494
>gb|AC091390.1|AC091390 Homo sapiens chromosome 7q22, complete sequence Length = 120166 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 ggtggtggtggtggcaggtg 112 |||||||||||||||||||| Sbjct: 93715 ggtggtggtggtggcaggtg 93696
>emb|CR387305.1| Gallus gallus finished cDNA, clone ChEST840o3 Length = 1338 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 gtggtggtggtggcaggtga 113 |||||||||||||||||||| Sbjct: 409 gtggtggtggtggcaggtga 428
>dbj|AK083966.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130070D22 product:Ca<2+>dependent activator protein for secretion, full insert sequence Length = 4361 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 ggtggtggtggtggcaggtg 112 |||||||||||||||||||| Sbjct: 4353 ggtggtggtggtggcaggtg 4334
>gb|AC148297.3| Pan troglodytes BAC clone CH251-542K24 from chromosome 7, complete sequence Length = 192516 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 ggtggtggtggtggcaggtg 112 |||||||||||||||||||| Sbjct: 140290 ggtggtggtggtggcaggtg 140309
>gb|AC153546.10| Mus musculus 10 BAC RP23-356P21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 207122 Score = 40.1 bits (20), Expect = 5.4 Identities = 35/40 (87%) Strand = Plus / Minus Query: 32 gatctgcctccctccctcccgttcgtctccctcttcctct 71 |||||||||| ||||||||| ||| || ||||||||||| Sbjct: 47183 gatctgcctctctccctccccttctacttcctcttcctct 47144
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 gcggtggtggtggtggcagg 110 |||||||||||||||||||| Sbjct: 23759146 gcggtggtggtggtggcagg 23759165
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 cggccgcgccagcggcggcg 237 |||||||||||||||||||| Sbjct: 2343040 cggccgcgccagcggcggcg 2343021
>gb|AC018488.7|AC018488 Drosophila melanogaster, chromosome X, region 13A-13B, BAC clone BACR09F03, complete sequence Length = 165118 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 gcggtggtggtggtggcagg 110 |||||||||||||||||||| Sbjct: 123239 gcggtggtggtggtggcagg 123220
>emb|BX833720.1|CNS09Z9S Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL73ZE02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 599 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 cagcggtggtggtggtggca 108 |||||||||||||||||||| Sbjct: 130 cagcggtggtggtggtggca 149
>emb|BX830265.1|CNS09YOU Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB6ZA07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 691 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 cagcggtggtggtggtggca 108 |||||||||||||||||||| Sbjct: 163 cagcggtggtggtggtggca 182
>gb|AC154592.2| Mus musculus BAC clone RP23-249J17 from chromosome 14, complete sequence Length = 211647 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 ggtggtggtggtggcaggtg 112 |||||||||||||||||||| Sbjct: 50665 ggtggtggtggtggcaggtg 50684
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 216 cccggccgcgccagcggcggcgcc 239 ||||||| |||||||||||||||| Sbjct: 4596991 cccggccacgccagcggcggcgcc 4597014
>gb|AC093127.3| Papio anubis clone RP41-335G18, complete sequence Length = 89944 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 ggtggtggtggtggcaggtg 112 |||||||||||||||||||| Sbjct: 25899 ggtggtggtggtggcaggtg 25918
>gb|AC148962.4| Atelerix albiventris clone LB4-372K23, complete sequence Length = 54256 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 39 ctccctccctcccgttcgtctccctcttcctc 70 ||||||||||||| ||| ||| |||||||||| Sbjct: 14295 ctccctccctccctttcttcttcctcttcctc 14326
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 215 ccccggccgcgccagcggcg 234 |||||||||||||||||||| Sbjct: 5268188 ccccggccgcgccagcggcg 5268169
>dbj|AB119055.1| Homo sapiens mRNA for photomedin-1, complete cds Length = 1959 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 gcggtggtggtggtggcagg 110 |||||||||||||||||||| Sbjct: 1094 gcggtggtggtggtggcagg 1075
>dbj|AB118807.1| Seriola quinqueradiata SYN2, SYN2 mRNAs for synapsin 2B, synapsin 2A last exon peptide homolog, partial and complete cds Length = 2350 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 ggtggtggtggtggcaggtg 112 |||||||||||||||||||| Sbjct: 70 ggtggtggtggtggcaggtg 51
>dbj|AB008268.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MSJ1 Length = 83594 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 cagcggtggtggtggtggca 108 |||||||||||||||||||| Sbjct: 74233 cagcggtggtggtggtggca 74252
>dbj|AB120365.1| Seriola quinqueradiata SYN2, SYN2B mRNAs for synapsin 2a(pseudo), synapsin 2b, partial cds Length = 2377 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 ggtggtggtggtggcaggtg 112 |||||||||||||||||||| Sbjct: 70 ggtggtggtggtggcaggtg 51
>ref|XM_560057.1| Anopheles gambiae str. PEST ENSANGP00000029356 (ENSANGG00000023396), partial mRNA Length = 631 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 cagcggtggtggtggtggca 108 |||||||||||||||||||| Sbjct: 581 cagcggtggtggtggtggca 562
>gb|AC156025.2| Mus musculus BAC clone RP23-71L21 from 14, complete sequence Length = 215610 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 ggtggtggtggtggcaggtg 112 |||||||||||||||||||| Sbjct: 19924 ggtggtggtggtggcaggtg 19905
>gb|AE003498.5| Drosophila melanogaster chromosome X, section 50 of 74 of the complete sequence Length = 341520 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 gcggtggtggtggtggcagg 110 |||||||||||||||||||| Sbjct: 123994 gcggtggtggtggtggcagg 123975
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 cggccgcgccagcggcggcg 237 |||||||||||||||||||| Sbjct: 2350821 cggccgcgccagcggcggcg 2350802
>gb|AC004092.1|AC004092 Human Cosmid g1248a217 from 7q31.3, complete sequence Length = 43644 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 caaaggcacctccaagctat 312 |||||||||||||||||||| Sbjct: 18011 caaaggcacctccaagctat 17992
>emb|CR956418.10| Pig DNA sequence from clone PigE-219P24 on chromosome 6, complete sequence Length = 173652 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 gtggtggtggtggcaggtga 113 |||||||||||||||||||| Sbjct: 31095 gtggtggtggtggcaggtga 31114
>emb|CT027681.7| Mouse DNA sequence from clone RP24-330H24 on chromosome 16, complete sequence Length = 190475 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 gcggtggtggtggtggcagg 110 |||||||||||||||||||| Sbjct: 19317 gcggtggtggtggtggcagg 19336
>emb|AL662804.18| Mouse DNA sequence from clone RP23-341C5 on chromosome 11, complete sequence Length = 223438 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 gatctgcctccctccctccc 51 |||||||||||||||||||| Sbjct: 195920 gatctgcctccctccctccc 195901
>emb|AL807376.4| Mouse DNA sequence from clone RP23-436K3 on chromosome X, complete sequence Length = 203189 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 155 tcagatcttgctccatggga 174 |||||||||||||||||||| Sbjct: 32640 tcagatcttgctccatggga 32659
>dbj|AK074164.1| Homo sapiens mRNA for FLJ00237 protein Length = 4609 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 gcggtggtggtggtggcagg 110 |||||||||||||||||||| Sbjct: 757 gcggtggtggtggtggcagg 738 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,056,772 Number of Sequences: 3902068 Number of extensions: 4056772 Number of successful extensions: 422817 Number of sequences better than 10.0: 124 Number of HSP's better than 10.0 without gapping: 121 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 421466 Number of HSP's gapped (non-prelim): 1345 length of query: 405 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 383 effective length of database: 17,147,199,772 effective search space: 6567377512676 effective search space used: 6567377512676 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)