ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl12h01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 170 2e-39
2dbj|AP005609.3| Oryza sativa (japonica cultivar-group) genomic D... 170 2e-39
3emb|AL031033.5|HS321D2 Human DNA sequence from clone LA16c-321D2... 48 0.023
4gb|AE006465.1| Homo sapiens 16p13.3 sequence section 4 of 8 48 0.023
5dbj|AK128869.1| Homo sapiens cDNA FLJ46847 fis, clone UTERU3005264 48 0.023
6dbj|AK024476.1| Homo sapiens mRNA for FLJ00069 protein, partial cds 48 0.023
7emb|AJ333112.1|HSA333112 Homo sapiens genomic sequence surroundi... 48 0.023
8emb|BX293563.9| Mouse DNA sequence from clone RP23-379K6 on chro... 48 0.023
9gb|AC126782.23| Medicago truncatula clone mth2-14p11, complete s... 46 0.090
10emb|AL592464.24| Human DNA sequence from clone RP11-740P5 on chr... 46 0.090
11gb|AC020709.4|AC020709 Homo sapiens clone RP11-425F18, complete ... 46 0.090
12ref|NM_197667.1| Oryza sativa (japonica cultivar-group) putative... 44 0.36
13gb|AC026758.8| Oryza sativa chromosome 10 BAC OSJNBa0015J15 geno... 44 0.36
14dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.36
15gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 44 0.36
16gb|L43135.1|MTBPPQEF Methylobacterium extorquens putative protea... 44 0.36
17ref|XM_655147.1| Aspergillus nidulans FGSC A4 hypothetical prote... 42 1.4
18gb|AC135505.15| Medicago truncatula clone mth2-24j8, complete se... 42 1.4
19gb|AC097725.2| Drosophila melanogaster 3L BAC RP98-48E19 (Roswel... 42 1.4
20tpg|BK001901.1| TPA: TPA_inf: Drosophila melanogaster HDC08196 (... 42 1.4
21gb|M69143.1|CHKAFTROP4 Gallus gallus alpha-tropomyosin gene, exo... 42 1.4
22dbj|AP004846.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
23dbj|AP004257.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
24emb|AJ299710.1|MST299710 Muscicapa striata partial TM gene, intr... 42 1.4
25emb|AJ299709.1|FPA299709 Ficedula parva partial TM gene, intron ... 42 1.4
26emb|AJ299708.1|FSP299708 Ficedula speculigera partial TM gene, i... 42 1.4
27emb|AJ299707.1|FSE299707 Ficedula semitorquata partial TM gene, ... 42 1.4
28emb|AJ299706.1|FHY299706 Ficedula hypoleuca partial TM gene, int... 42 1.4
29emb|AJ299705.1|FHY299705 Ficedula hypoleuca partial TM gene, int... 42 1.4
30emb|AJ299704.1|FHY299704 Ficedula hypoleuca partial TM gene, int... 42 1.4
31emb|AJ299703.1|FHY299703 Ficedula hypoleuca partial TM gene, int... 42 1.4
32emb|AJ299702.1|FAL299702 Ficedula albicollis partial TM gene, in... 42 1.4
33emb|AJ299701.1|FAL299701 Ficedula albicollis partial TM gene, in... 42 1.4
34emb|AJ299700.1|FAL299700 Ficedula albicollis partial TM gene, in... 42 1.4
35emb|AJ299699.1|FAL299699 Ficedula albicollis partial TM gene, in... 42 1.4
36emb|AJ299698.1|FAL299698 Ficedula albicollis partial TM gene, in... 42 1.4
37emb|AJ324374.1|HSA324374 Homo sapiens genomic sequence surroundi... 42 1.4
38gb|AE003477.3| Drosophila melanogaster chromosome 3L, section 11... 42 1.4
39emb|X57994.1|GGTMEX456 G.gallus gene for tropomyosin (alpha isof... 42 1.4
40ref|XM_510722.1| PREDICTED: Pan troglodytes similar to CTF18, ch... 40 5.6
41ref|XM_482429.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.6
42gb|AC153856.23| Mus musculus 10 BAC RP23-468J15 (Roswell Park Ca... 40 5.6
43gb|AC132483.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.6
44gb|AC183833.2| Pan troglodytes BAC clone CH251-141C5 from chromo... 40 5.6
45gb|AC183613.3| Pan troglodytes BAC clone CH251-171F23 from chrom... 40 5.6
46gb|AC093168.3| Homo sapiens BAC clone RP11-148M21 from 7, comple... 40 5.6
47gb|AC026471.6| Homo sapiens chromosome 16 clone RP11-452L6, comp... 40 5.6
48emb|AL445198.13| Human DNA sequence from clone RP11-288F8 on chr... 40 5.6
49gb|AC091770.5| Homo sapiens BAC clone RP11-655M5 from 7, complet... 40 5.6
50emb|BX640442.1| Bordetella bronchiseptica strain RB50, complete ... 40 5.6
51emb|BX640430.1| Bordetella parapertussis strain 12822, complete ... 40 5.6
52emb|BX640416.1| Bordetella pertussis strain Tohama I, complete g... 40 5.6
53gb|AC087343.4| Homo sapiens chromosome 8, clone RP11-734J24, com... 40 5.6
54gb|AC011517.7| Homo sapiens chromosome 19 clone LLNLF-175A7, com... 40 5.6
55gb|AC087761.6| Homo sapiens chromosome 15, clone RP11-2E17, comp... 40 5.6
56gb|AC012337.8| Homo sapiens chromosome , clone RP11-119O22, comp... 40 5.6
57gb|AC087170.6| Homo sapiens chromosome 8, clone RP11-258J10, com... 40 5.6
58gb|AC092784.2| Homo sapiens chromosome 1 clone RP5-833A20, compl... 40 5.6
59gb|AC008900.5| Homo sapiens chromosome 5 clone CTD-2242C17, comp... 40 5.6
60gb|AC022126.7| Homo sapiens chromosome 5 clone CTD-2141G3, compl... 40 5.6
61dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
62dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
63dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
64gb|AC156449.2| Volvox carteri clone JGIAOBO-37K9, complete sequence 40 5.6
65gb|AY167563.1| Hordeum vulgare subsp. vulgare GAMYB-binding prot... 40 5.6
66gb|AC158804.3| Mus musculus 10 BAC RP24-354M22 (Roswell Park Can... 40 5.6
67dbj|AP005521.4| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
68dbj|AK106423.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.6
69dbj|AK067863.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.6
70emb|AJ890744.1| Luscinia svecica partial tm gene for tropomyosin... 40 5.6
71emb|AJ890743.1| Luscinia svecica partial tm gene for tropomyosin... 40 5.6
72emb|AJ890742.1| Luscinia svecica partial tm gene for tropomyosin... 40 5.6
73emb|AJ890741.1| Luscinia svecica partial tm gene for tropomyosin... 40 5.6
74emb|AJ890740.1| Luscinia svecica partial tm gene for tropomyosin... 40 5.6
75emb|AJ890739.1| Luscinia svecica partial tm gene for tropomyosin... 40 5.6
76emb|AJ890738.1| Luscinia svecica partial tm gene for tropomyosin... 40 5.6
77emb|AJ890737.1| Luscinia svecica partial tm gene for tropomyosin... 40 5.6
78emb|AJ890736.1| Luscinia svecica partial tm gene for tropomyosin... 40 5.6
79emb|AJ890735.1| Hirundo rustica partial tm gene for tropomyosin ... 40 5.6
80emb|AJ890734.1| Hirundo rustica partial tm gene for tropomyosin ... 40 5.6
81emb|AJ890733.1| Hirundo rustica partial tm gene for tropomyosin ... 40 5.6
82emb|AJ890732.1| Hirundo rustica partial tm gene for tropomyosin ... 40 5.6
83emb|AJ890731.1| Hirundo rustica partial tm gene for tropomyosin ... 40 5.6
84emb|AJ890730.1| Hirundo rustica partial tm gene for tropomyosin ... 40 5.6
85emb|AJ890729.1| Hirundo rustica partial tm gene for tropomyosin ... 40 5.6
86emb|AJ890728.1| Hirundo rustica partial tm gene for tropomyosin ... 40 5.6
87emb|AJ890727.1| Hirundo rustica partial tm gene for tropomyosin ... 40 5.6
88gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.6
89emb|AL831797.4|CNS08CAA Oryza sativa chromosome 12, . BAC OSJNBa... 40 5.6 
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  170 bits (86), Expect = 2e-39
 Identities = 183/214 (85%), Gaps = 1/214 (0%)
 Strand = Plus / Plus

                                                                            
Query: 203      tctcacgaatccagaataccccgtagaaggttccgaagaaccgagggtgctactaagagc 262
                ||||| ||||||||||  || ||||||||| |  | | ||| |||||||| || ||||||
Sbjct: 20026359 tctcaagaatccagaactccacgtagaagggtgaggaaaactgagggtgccaccaagagc 20026418

                                                                            
Query: 263      atggaagattcagtcaagcgaaagatggagcagttctacgagggggtggatggtccgccc 322
                 |||||||||||||||||||||||||||||||||| || || ||  |||||||||| || 
Sbjct: 20026419 ctggaagattcagtcaagcgaaagatggagcagttttatgaaggattggatggtccacct 20026478

                                                                            
Query: 323      ctccgggtcctccca-tcggcggccttggggaaatcggcatgaattgcatgctcgtcggg 381
                ||||| ||||| ||| | || |||||||| |||||||||||||||||||||||||| |||
Sbjct: 20026479 ctccgagtccttccaataggtggccttggagaaatcggcatgaattgcatgctcgtaggg 20026538

                                                  
Query: 382      aactatgaccgttatattctgattgatgcagggg 415
                |||||||||||||| ||  |||| ||||||||||
Sbjct: 20026539 aactatgaccgttacatattgatagatgcagggg 20026572



 Score = 46.1 bits (23), Expect = 0.090
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                           
Query: 82       cgccatggtcgcgctcgcctccctctc 108
                ||||||||| |||||||||||||||||
Sbjct: 20025410 cgccatggtggcgctcgcctccctctc 20025436



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 29       cactccactccacgccctccctccc 53
                |||||||||||||||||||| ||||
Sbjct: 33086179 cactccactccacgccctccttccc 33086203
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>dbj|AP005609.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0014M17
          Length = 156778

 Score =  170 bits (86), Expect = 2e-39
 Identities = 183/214 (85%), Gaps = 1/214 (0%)
 Strand = Plus / Plus

                                                                          
Query: 203    tctcacgaatccagaataccccgtagaaggttccgaagaaccgagggtgctactaagagc 262
              ||||| ||||||||||  || ||||||||| |  | | ||| |||||||| || ||||||
Sbjct: 130480 tctcaagaatccagaactccacgtagaagggtgaggaaaactgagggtgccaccaagagc 130539

                                                                          
Query: 263    atggaagattcagtcaagcgaaagatggagcagttctacgagggggtggatggtccgccc 322
               |||||||||||||||||||||||||||||||||| || || ||  |||||||||| || 
Sbjct: 130540 ctggaagattcagtcaagcgaaagatggagcagttttatgaaggattggatggtccacct 130599

                                                                          
Query: 323    ctccgggtcctccca-tcggcggccttggggaaatcggcatgaattgcatgctcgtcggg 381
              ||||| ||||| ||| | || |||||||| |||||||||||||||||||||||||| |||
Sbjct: 130600 ctccgagtccttccaataggtggccttggagaaatcggcatgaattgcatgctcgtaggg 130659

                                                
Query: 382    aactatgaccgttatattctgattgatgcagggg 415
              |||||||||||||| ||  |||| ||||||||||
Sbjct: 130660 aactatgaccgttacatattgatagatgcagggg 130693



 Score = 46.1 bits (23), Expect = 0.090
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 82     cgccatggtcgcgctcgcctccctctc 108
              ||||||||| |||||||||||||||||
Sbjct: 129531 cgccatggtggcgctcgcctccctctc 129557
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>emb|AL031033.5|HS321D2 Human DNA sequence from clone LA16c-321D2 on chromosome 16 Contains a
            gene for a Ribosomal Large Subunit Pseudouridine Synthase
            (EC 4.2.1.70, Pseudouridylate Synthase, Uracil Hydrolase)
            LIKE protein, a gene for a novel protein similar to
            replication factors, and part of a novel gene and ESTs,
            complete sequence
          Length = 25815

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 58   cccggtccgaacctcccgcgccgccgcc 85
            |||| |||||||||||||||||||||||
Sbjct: 4392 cccgctccgaacctcccgcgccgccgcc 4365
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>gb|AE006465.1| Homo sapiens 16p13.3 sequence section 4 of 8
          Length = 278911

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 58   cccggtccgaacctcccgcgccgccgcc 85
            |||| |||||||||||||||||||||||
Sbjct: 4884 cccgctccgaacctcccgcgccgccgcc 4857
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>dbj|AK128869.1| Homo sapiens cDNA FLJ46847 fis, clone UTERU3005264
          Length = 4088

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                      
Query: 58 cccggtccgaacctcccgcgccgccgcc 85
          |||| |||||||||||||||||||||||
Sbjct: 43 cccgctccgaacctcccgcgccgccgcc 16
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>dbj|AK024476.1| Homo sapiens mRNA for FLJ00069 protein, partial cds
          Length = 4494

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                      
Query: 58 cccggtccgaacctcccgcgccgccgcc 85
          |||| |||||||||||||||||||||||
Sbjct: 30 cccgctccgaacctcccgcgccgccgcc 3
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>emb|AJ333112.1|HSA333112 Homo sapiens genomic sequence surrounding NotI site, clone
           NR1-MM18RS
          Length = 584

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 58  cccggtccgaacctcccgcgccgccgcc 85
           |||| |||||||||||||||||||||||
Sbjct: 245 cccgctccgaacctcccgcgccgccgcc 272
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>emb|BX293563.9| Mouse DNA sequence from clone RP23-379K6 on chromosome 4, complete
             sequence
          Length = 104349

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 26    ctccactccactccacgccctccctccc 53
             |||||||||||||||| |||||||||||
Sbjct: 19615 ctccactccactccactccctccctccc 19588
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>gb|AC126782.23| Medicago truncatula clone mth2-14p11, complete sequence
          Length = 135659

 Score = 46.1 bits (23), Expect = 0.090
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                        
Query: 352   gaaatcggcatgaattgcatgctcgtcgggaactatgaccgttatattctgattgatgc 410
             ||||| || ||||| || |||||||| |||||  ||||||||||||| || ||||||||
Sbjct: 50850 gaaattggaatgaactgtatgctcgttgggaatcatgaccgttatatcctcattgatgc 50908
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>emb|AL592464.24| Human DNA sequence from clone RP11-740P5 on chromosome 1, complete
             sequence
          Length = 120028

 Score = 46.1 bits (23), Expect = 0.090
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 31    ctccactccacgccctccctccc 53
             |||||||||||||||||||||||
Sbjct: 37616 ctccactccacgccctccctccc 37638
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>gb|AC020709.4|AC020709 Homo sapiens clone RP11-425F18, complete sequence
          Length = 184104

 Score = 46.1 bits (23), Expect = 0.090
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 31    ctccactccacgccctccctccc 53
             |||||||||||||||||||||||
Sbjct: 27820 ctccactccacgccctccctccc 27842
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>ref|NM_197667.1| Oryza sativa (japonica cultivar-group) putative Scl1 protein
           (OSJNBa0015J15.19), mRNA
          Length = 1749

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 73  ccgcgccgccgccatggtcgcgctcg 98
           |||||||||||||||||||| |||||
Sbjct: 346 ccgcgccgccgccatggtcgagctcg 321
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>gb|AC026758.8| Oryza sativa chromosome 10 BAC OSJNBa0015J15 genomic sequence, complete
             sequence
          Length = 144798

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 73    ccgcgccgccgccatggtcgcgctcg 98
             |||||||||||||||||||| |||||
Sbjct: 87868 ccgcgccgccgccatggtcgagctcg 87843
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 73       ccgcgccgccgccatggtcgcgctcg 98
                |||||||||||||||||||| |||||
Sbjct: 21117838 ccgcgccgccgccatggtcgagctcg 21117863
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 73       ccgcgccgccgccatggtcgcgctcg 98
                |||||||||||||||||||| |||||
Sbjct: 21129102 ccgcgccgccgccatggtcgagctcg 21129127
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>gb|L43135.1|MTBPPQEF Methylobacterium extorquens putative proteases (pqqE, pqqF) and
           ORF219 genes, complete cds's, dioxygenase (ORF88') gene,
           5' end of cds
          Length = 4256

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 344 gccttggggaaatcggcatgaa 365
           ||||||||||||||||||||||
Sbjct: 154 gccttggggaaatcggcatgaa 175
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>ref|XM_655147.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN2635.2), mRNA
          Length = 666

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 99  cctccctctcttctctgtgcctctg 123
           ||||||||||||||||||| |||||
Sbjct: 622 cctccctctcttctctgtgtctctg 598
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>gb|AC135505.15| Medicago truncatula clone mth2-24j8, complete sequence
          Length = 124563

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 54/65 (83%)
 Strand = Plus / Plus

                                                                         
Query: 260   agcatggaagattcagtcaagcgaaagatggagcagttctacgagggggtggatggtccg 319
             |||||||||||||| ||  | |||||||||||||| || ||||| |||   ||||| |||
Sbjct: 40110 agcatggaagattccgttcaacgaaagatggagcaattttacgaagggtcagatgggccg 40169

                  
Query: 320   cccct 324
             |||||
Sbjct: 40170 cccct 40174
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>gb|AC097725.2| Drosophila melanogaster 3L BAC RP98-48E19 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 176521

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 23    gtgctccactccactccacgccctc 47
             ||||||||||||||||||| |||||
Sbjct: 84735 gtgctccactccactccactccctc 84711
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>tpg|BK001901.1| TPA: TPA_inf: Drosophila melanogaster HDC08196 (HDC08196) gene,
           complete cds
          Length = 1661

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 23  gtgctccactccactccacgccctc 47
           ||||||||||||||||||| |||||
Sbjct: 489 gtgctccactccactccactccctc 465
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>gb|M69143.1|CHKAFTROP4 Gallus gallus alpha-tropomyosin gene, exons 4, 5, 6a, 6b, 7, 8, and
            9a
          Length = 3928

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 263  atggaagattcagtcaagcgaaaga 287
            ||||||||||||||||||| |||||
Sbjct: 1124 atggaagattcagtcaagcaaaaga 1100
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>dbj|AP004846.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1293_A01
          Length = 139121

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 29     cactccactccacgccctccctccc 53
              |||||||||||||||||||| ||||
Sbjct: 132119 cactccactccacgccctccttccc 132143
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>dbj|AP004257.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OJ1369_G08
          Length = 104190

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 29   cactccactccacgccctccctccc 53
            |||||||||||||||||||| ||||
Sbjct: 1839 cactccactccacgccctccttccc 1863
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>emb|AJ299710.1|MST299710 Muscicapa striata partial TM gene, intron sequence, isolate Cz1
          Length = 491

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 263 atggaagattcagtcaagcgaaaga 287
           ||||||||||||||||||| |||||
Sbjct: 453 atggaagattcagtcaagcaaaaga 429
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>emb|AJ299709.1|FPA299709 Ficedula parva partial TM gene, intron sequence, isolate Cz1
          Length = 493

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 263 atggaagattcagtcaagcgaaaga 287
           ||||||||||||||||||| |||||
Sbjct: 455 atggaagattcagtcaagcaaaaga 431
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>emb|AJ299708.1|FSP299708 Ficedula speculigera partial TM gene, intron sequence, isolate Mor1
          Length = 489

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 263 atggaagattcagtcaagcgaaaga 287
           ||||||||||||||||||| |||||
Sbjct: 451 atggaagattcagtcaagcaaaaga 427
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>emb|AJ299707.1|FSE299707 Ficedula semitorquata partial TM gene, intron sequence, isolate Gr1
          Length = 489

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 263 atggaagattcagtcaagcgaaaga 287
           ||||||||||||||||||| |||||
Sbjct: 451 atggaagattcagtcaagcaaaaga 427
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>emb|AJ299706.1|FHY299706 Ficedula hypoleuca partial TM gene, intron sequence, isolate Dlx2
          Length = 489

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 263 atggaagattcagtcaagcgaaaga 287
           ||||||||||||||||||| |||||
Sbjct: 451 atggaagattcagtcaagcaaaaga 427
to top
>emb|AJ299705.1|FHY299705 Ficedula hypoleuca partial TM gene, intron sequence, isolate Sp3
          Length = 489

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 263 atggaagattcagtcaagcgaaaga 287
           ||||||||||||||||||| |||||
Sbjct: 451 atggaagattcagtcaagcaaaaga 427
to top
>emb|AJ299704.1|FHY299704 Ficedula hypoleuca partial TM gene, intron sequence, isolate Sp1
          Length = 489

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 263 atggaagattcagtcaagcgaaaga 287
           ||||||||||||||||||| |||||
Sbjct: 451 atggaagattcagtcaagcaaaaga 427
to top
>emb|AJ299703.1|FHY299703 Ficedula hypoleuca partial TM gene, intron sequence, isolate Os1
          Length = 489

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 263 atggaagattcagtcaagcgaaaga 287
           ||||||||||||||||||| |||||
Sbjct: 451 atggaagattcagtcaagcaaaaga 427
to top
>emb|AJ299702.1|FAL299702 Ficedula albicollis partial TM gene, intron sequence, isolate Dlx1
          Length = 489

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 263 atggaagattcagtcaagcgaaaga 287
           ||||||||||||||||||| |||||
Sbjct: 451 atggaagattcagtcaagcaaaaga 427
to top
>emb|AJ299701.1|FAL299701 Ficedula albicollis partial TM gene, intron sequence, isolate B10
          Length = 489

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 263 atggaagattcagtcaagcgaaaga 287
           ||||||||||||||||||| |||||
Sbjct: 451 atggaagattcagtcaagcaaaaga 427
to top
>emb|AJ299700.1|FAL299700 Ficedula albicollis partial TM gene, intron sequence, isolate B8
          Length = 489

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 263 atggaagattcagtcaagcgaaaga 287
           ||||||||||||||||||| |||||
Sbjct: 451 atggaagattcagtcaagcaaaaga 427
to top
>emb|AJ299699.1|FAL299699 Ficedula albicollis partial TM gene, intron sequence, isolate B6
          Length = 489

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 263 atggaagattcagtcaagcgaaaga 287
           ||||||||||||||||||| |||||
Sbjct: 451 atggaagattcagtcaagcaaaaga 427
to top
>emb|AJ299698.1|FAL299698 Ficedula albicollis partial TM gene, intron sequence, isolate B3
          Length = 489

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 263 atggaagattcagtcaagcgaaaga 287
           ||||||||||||||||||| |||||
Sbjct: 451 atggaagattcagtcaagcaaaaga 427
to top
>emb|AJ324374.1|HSA324374 Homo sapiens genomic sequence surrounding NotI site, clone
           NR5-DF19C
          Length = 675

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 65  cgaacctcccgcgccgccgcc 85
           |||||||||||||||||||||
Sbjct: 252 cgaacctcccgcgccgccgcc 272
to top
>gb|AE003477.3| Drosophila melanogaster chromosome 3L, section 11 of 83 of the complete
             sequence
          Length = 297894

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 23    gtgctccactccactccacgccctc 47
             ||||||||||||||||||| |||||
Sbjct: 70857 gtgctccactccactccactccctc 70833
to top
>emb|X57994.1|GGTMEX456 G.gallus gene for tropomyosin (alpha isoform), Exons 4, 5, 6a, 6b, 7,
            8, and 9a
          Length = 3927

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 263  atggaagattcagtcaagcgaaaga 287
            ||||||||||||||||||| |||||
Sbjct: 1124 atggaagattcagtcaagcaaaaga 1100
to top
>ref|XM_510722.1| PREDICTED: Pan troglodytes similar to CTF18, chromosome
           transmission fidelity factor 18 homolog; homolog of
           yeast CHL12; chromosome 16 open reading frame 41
           (LOC453808), mRNA
          Length = 2325

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 58  cccggtccgaacctcccgcgccgccgcc 85
           |||| |||||| ||||||||||||||||
Sbjct: 196 cccgctccgaatctcccgcgccgccgcc 169
to top
>ref|XM_482429.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1049

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 25 gctccactccactccacgcc 44
          ||||||||||||||||||||
Sbjct: 11 gctccactccactccacgcc 30
to top
>gb|AC153856.23| Mus musculus 10 BAC RP23-468J15 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 188027

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 43    ccctccctcccggcccccggtccg 66
             ||||||||||||||||||| ||||
Sbjct: 40259 ccctccctcccggcccccgctccg 40282
to top
>gb|AC132483.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0014C03, complete sequence
          Length = 143739

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 26    ctccactccactccacgccc 45
             ||||||||||||||||||||
Sbjct: 26168 ctccactccactccacgccc 26149
to top
>gb|AC183833.2| Pan troglodytes BAC clone CH251-141C5 from chromosome 7, complete
             sequence
          Length = 155911

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 301   cgagggggtggatggtccgc 320
             ||||||||||||||||||||
Sbjct: 20514 cgagggggtggatggtccgc 20533
to top
>gb|AC183613.3| Pan troglodytes BAC clone CH251-171F23 from chromosome 7, complete
             sequence
          Length = 180545

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 301   cgagggggtggatggtccgc 320
             ||||||||||||||||||||
Sbjct: 36035 cgagggggtggatggtccgc 36016
to top
>gb|AC093168.3| Homo sapiens BAC clone RP11-148M21 from 7, complete sequence
          Length = 148689

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 301   cgagggggtggatggtccgc 320
             ||||||||||||||||||||
Sbjct: 60284 cgagggggtggatggtccgc 60303
to top
>gb|AC026471.6| Homo sapiens chromosome 16 clone RP11-452L6, complete sequence
          Length = 186860

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 33     ccactccacgccctccctcc 52
              ||||||||||||||||||||
Sbjct: 166444 ccactccacgccctccctcc 166463
to top
>emb|AL445198.13| Human DNA sequence from clone RP11-288F8 on chromosome 1 Contains part
             of the NFIA gene for nuclear factor I/A, complete sequence
          Length = 78404

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 99    cctccctctcttctctgtgcctct 122
             ||||||||||||||||| ||||||
Sbjct: 29129 cctccctctcttctctgagcctct 29152
to top
>gb|AC091770.5| Homo sapiens BAC clone RP11-655M5 from 7, complete sequence
          Length = 93543

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 103   cctctcttctctgtgcctct 122
             ||||||||||||||||||||
Sbjct: 78629 cctctcttctctgtgcctct 78648
to top
>emb|BX640442.1| Bordetella bronchiseptica strain RB50, complete genome; segment 6/16
          Length = 349876

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 75     gcgccgccgccatggtcgcg 94
              ||||||||||||||||||||
Sbjct: 112937 gcgccgccgccatggtcgcg 112956
to top
>emb|BX640430.1| Bordetella parapertussis strain 12822, complete genome; segment 8/14
          Length = 348014

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 75    gcgccgccgccatggtcgcg 94
             ||||||||||||||||||||
Sbjct: 23837 gcgccgccgccatggtcgcg 23856
to top
>emb|BX640416.1| Bordetella pertussis strain Tohama I, complete genome; segment 6/12
          Length = 349354

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 75     gcgccgccgccatggtcgcg 94
              ||||||||||||||||||||
Sbjct: 308757 gcgccgccgccatggtcgcg 308776
to top
>gb|AC087343.4| Homo sapiens chromosome 8, clone RP11-734J24, complete sequence
          Length = 54346

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 99    cctccctctcttctctgtgc 118
             ||||||||||||||||||||
Sbjct: 53499 cctccctctcttctctgtgc 53480
to top
>gb|AC011517.7| Homo sapiens chromosome 19 clone LLNLF-175A7, complete sequence
          Length = 38081

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 98   gcctccctctcttctctgtg 117
            ||||||||||||||||||||
Sbjct: 5576 gcctccctctcttctctgtg 5595
to top
>gb|AC087761.6| Homo sapiens chromosome 15, clone RP11-2E17, complete sequence
          Length = 153740

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 26     ctccactccactccacgccctccc 49
              |||||||||||||||| |||||||
Sbjct: 121282 ctccactccactccactccctccc 121305
to top
>gb|AC012337.8| Homo sapiens chromosome , clone RP11-119O22, complete sequence
          Length = 171695

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 26     ctccactccactccacgccctccc 49
              |||||||||||||||| |||||||
Sbjct: 164599 ctccactccactccactccctccc 164622
to top
>gb|AC087170.6| Homo sapiens chromosome 8, clone RP11-258J10, complete sequence
          Length = 172443

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 99     cctccctctcttctctgtgc 118
              ||||||||||||||||||||
Sbjct: 163792 cctccctctcttctctgtgc 163811
to top
>gb|AC092784.2| Homo sapiens chromosome 1 clone RP5-833A20, complete sequence
          Length = 117613

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 99    cctccctctcttctctgtgcctct 122
             ||||||||||||||||| ||||||
Sbjct: 30456 cctccctctcttctctgagcctct 30433
to top
>gb|AC008900.5| Homo sapiens chromosome 5 clone CTD-2242C17, complete sequence
          Length = 166253

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 106    ctcttctctgtgcctctgcg 125
              ||||||||||||||||||||
Sbjct: 162365 ctcttctctgtgcctctgcg 162346
to top
>gb|AC022126.7| Homo sapiens chromosome 5 clone CTD-2141G3, complete sequence
          Length = 187765

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 106    ctcttctctgtgcctctgcg 125
              ||||||||||||||||||||
Sbjct: 109932 ctcttctctgtgcctctgcg 109913
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 70       ctcccgcgccgccgccatggtcgc 93
                ||||| ||||||||||||||||||
Sbjct: 24910819 ctcccccgccgccgccatggtcgc 24910842
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 25       gctccactccactccacgcc 44
                ||||||||||||||||||||
Sbjct: 20031590 gctccactccactccacgcc 20031609
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 26       ctccactccactccacgccc 45
                ||||||||||||||||||||
Sbjct: 19013525 ctccactccactccacgccc 19013506
to top
>gb|AC156449.2| Volvox carteri clone JGIAOBO-37K9, complete sequence
          Length = 37976

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 25   gctccactccactccacgcc 44
            ||||||||||||||||||||
Sbjct: 8678 gctccactccactccacgcc 8697
to top
>gb|AY167563.1| Hordeum vulgare subsp. vulgare GAMYB-binding protein (gbp5) mRNA,
           partial cds
          Length = 1878

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 95  ctcgcctccctctcttctct 114
           ||||||||||||||||||||
Sbjct: 910 ctcgcctccctctcttctct 891
to top
>gb|AC158804.3| Mus musculus 10 BAC RP24-354M22 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 151309

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 43    ccctccctcccggcccccggtccg 66
             ||||||||||||||||||| ||||
Sbjct: 98339 ccctccctcccggcccccgctccg 98362
to top
>dbj|AP005521.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0477F03
          Length = 176120

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 25     gctccactccactccacgcc 44
              ||||||||||||||||||||
Sbjct: 103441 gctccactccactccacgcc 103460
to top
>dbj|AK106423.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-103-B06,
          full insert sequence
          Length = 1049

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 25 gctccactccactccacgcc 44
          ||||||||||||||||||||
Sbjct: 11 gctccactccactccacgcc 30
to top
>dbj|AK067863.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013128N09, full
           insert sequence
          Length = 2446

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 70  ctcccgcgccgccgccatggtcgc 93
           ||||| ||||||||||||||||||
Sbjct: 158 ctcccccgccgccgccatggtcgc 135
to top
>emb|AJ890744.1| Luscinia svecica partial tm gene for tropomyosin (alpha isoform),
           intron 5, isolate 9
          Length = 369

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 264 tggaagattcagtcaagcgaaaga 287
           |||||||||||||||||| |||||
Sbjct: 369 tggaagattcagtcaagcaaaaga 346
to top
>emb|AJ890743.1| Luscinia svecica partial tm gene for tropomyosin (alpha isoform),
           intron 5, isolate 8
          Length = 369

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 264 tggaagattcagtcaagcgaaaga 287
           |||||||||||||||||| |||||
Sbjct: 369 tggaagattcagtcaagcaaaaga 346
to top
>emb|AJ890742.1| Luscinia svecica partial tm gene for tropomyosin (alpha isoform),
           intron 5, isolate 7
          Length = 369

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 264 tggaagattcagtcaagcgaaaga 287
           |||||||||||||||||| |||||
Sbjct: 369 tggaagattcagtcaagcaaaaga 346
to top
>emb|AJ890741.1| Luscinia svecica partial tm gene for tropomyosin (alpha isoform),
           intron 5, isolate 6
          Length = 369

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 264 tggaagattcagtcaagcgaaaga 287
           |||||||||||||||||| |||||
Sbjct: 369 tggaagattcagtcaagcaaaaga 346
to top
>emb|AJ890740.1| Luscinia svecica partial tm gene for tropomyosin (alpha isoform),
           intron 5, isolate 5
          Length = 369

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 264 tggaagattcagtcaagcgaaaga 287
           |||||||||||||||||| |||||
Sbjct: 369 tggaagattcagtcaagcaaaaga 346
to top
>emb|AJ890739.1| Luscinia svecica partial tm gene for tropomyosin (alpha isoform),
           intron 5, isolate 4
          Length = 369

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 264 tggaagattcagtcaagcgaaaga 287
           |||||||||||||||||| |||||
Sbjct: 369 tggaagattcagtcaagcaaaaga 346
to top
>emb|AJ890738.1| Luscinia svecica partial tm gene for tropomyosin (alpha isoform),
           intron 5, isolate 3
          Length = 369

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 264 tggaagattcagtcaagcgaaaga 287
           |||||||||||||||||| |||||
Sbjct: 369 tggaagattcagtcaagcaaaaga 346
to top
>emb|AJ890737.1| Luscinia svecica partial tm gene for tropomyosin (alpha isoform),
           intron 5, isolate 2
          Length = 369

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 264 tggaagattcagtcaagcgaaaga 287
           |||||||||||||||||| |||||
Sbjct: 369 tggaagattcagtcaagcaaaaga 346
to top
>emb|AJ890736.1| Luscinia svecica partial tm gene for tropomyosin (alpha isoform),
           intron 5, isolate 1
          Length = 369

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 264 tggaagattcagtcaagcgaaaga 287
           |||||||||||||||||| |||||
Sbjct: 369 tggaagattcagtcaagcaaaaga 346
to top
>emb|AJ890735.1| Hirundo rustica partial tm gene for tropomyosin (alpha isoform),
           intron 5, isolate 9
          Length = 406

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 264 tggaagattcagtcaagcgaaaga 287
           |||||||||||||||||| |||||
Sbjct: 405 tggaagattcagtcaagcaaaaga 382
to top
>emb|AJ890734.1| Hirundo rustica partial tm gene for tropomyosin (alpha isoform),
           intron 5, isolate 8
          Length = 406

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 264 tggaagattcagtcaagcgaaaga 287
           |||||||||||||||||| |||||
Sbjct: 405 tggaagattcagtcaagcaaaaga 382
to top
>emb|AJ890733.1| Hirundo rustica partial tm gene for tropomyosin (alpha isoform),
           intron 5, isolate 7
          Length = 406

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 264 tggaagattcagtcaagcgaaaga 287
           |||||||||||||||||| |||||
Sbjct: 405 tggaagattcagtcaagcaaaaga 382
to top
>emb|AJ890732.1| Hirundo rustica partial tm gene for tropomyosin (alpha isoform),
           intron 5, isolate 6
          Length = 406

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 264 tggaagattcagtcaagcgaaaga 287
           |||||||||||||||||| |||||
Sbjct: 405 tggaagattcagtcaagcaaaaga 382
to top
>emb|AJ890731.1| Hirundo rustica partial tm gene for tropomyosin (alpha isoform),
           intron 5, isolate 5
          Length = 406

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 264 tggaagattcagtcaagcgaaaga 287
           |||||||||||||||||| |||||
Sbjct: 405 tggaagattcagtcaagcaaaaga 382
to top
>emb|AJ890730.1| Hirundo rustica partial tm gene for tropomyosin (alpha isoform),
           intron 5, isolate 4
          Length = 406

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 264 tggaagattcagtcaagcgaaaga 287
           |||||||||||||||||| |||||
Sbjct: 405 tggaagattcagtcaagcaaaaga 382
to top
>emb|AJ890729.1| Hirundo rustica partial tm gene for tropomyosin (alpha isoform),
           intron 5, isolate 3
          Length = 406

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 264 tggaagattcagtcaagcgaaaga 287
           |||||||||||||||||| |||||
Sbjct: 405 tggaagattcagtcaagcaaaaga 382
to top
>emb|AJ890728.1| Hirundo rustica partial tm gene for tropomyosin (alpha isoform),
           intron 5, isolate 2
          Length = 406

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 264 tggaagattcagtcaagcgaaaga 287
           |||||||||||||||||| |||||
Sbjct: 405 tggaagattcagtcaagcaaaaga 382
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>emb|AJ890727.1| Hirundo rustica partial tm gene for tropomyosin (alpha isoform),
           intron 5, isolate 1
          Length = 406

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 264 tggaagattcagtcaagcgaaaga 287
           |||||||||||||||||| |||||
Sbjct: 405 tggaagattcagtcaagcaaaaga 382
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 70       ctcccgcgccgccgccatggtcgc 93
                ||||| ||||||||||||||||||
Sbjct: 24839025 ctcccccgccgccgccatggtcgc 24839048
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>emb|AL831797.4|CNS08CAA Oryza sativa chromosome 12, . BAC OSJNBa0010M16 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 132741

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 70    ctcccgcgccgccgccatggtcgc 93
             ||||| ||||||||||||||||||
Sbjct: 54049 ctcccccgccgccgccatggtcgc 54026


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,126,256
Number of Sequences: 3902068
Number of extensions: 3126256
Number of successful extensions: 73177
Number of sequences better than 10.0: 91
Number of HSP's better than 10.0 without gapping: 92
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 72570
Number of HSP's gapped (non-prelim): 599
length of query: 416
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 394
effective length of database: 17,147,199,772
effective search space: 6755996710168
effective search space used: 6755996710168
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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