ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl12g07 |
|---|---|
| Clone Library Name | barley_pub |
>gb|DP000060.1| Atelerix albiventris target 117 genomic scaffold Length = 527158 Score = 46.1 bits (23), Expect = 0.084 Identities = 23/23 (100%) Strand = Plus / Plus Query: 53 cccacctcccccaccgcagcagc 75 ||||||||||||||||||||||| Sbjct: 391400 cccacctcccccaccgcagcagc 391422
>gb|AC122209.5| Mus musculus BAC clone RP23-96B17 from chromosome 17, complete sequence Length = 185883 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 11 cctctccctccctcctcctgct 32 |||||||||||||||||||||| Sbjct: 129351 cctctccctccctcctcctgct 129330
>gb|AC167421.2| Mus musculus BAC clone RP23-143K19 from chromosome 3, complete sequence Length = 194311 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 tccctctccctccctcctcct 29 ||||||||||||||||||||| Sbjct: 21936 tccctctccctccctcctcct 21956
>gb|AC155164.5| Mus musculus BAC clone RP24-74L7 from chromosome 8, complete sequence Length = 193057 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 ctctccctccctcctcctgct 32 ||||||||||||||||||||| Sbjct: 118440 ctctccctccctcctcctgct 118460
>gb|AC165141.4| Mus musculus BAC clone RP24-535G5 from chromosome 17, complete sequence Length = 187883 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 5 ttgttccctctccctccctcc 25 ||||||||||||||||||||| Sbjct: 170566 ttgttccctctccctccctcc 170586
>gb|AY738117.1| Homo sapiens matrix metalloproteinase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase) (MMP2) gene, complete cds Length = 31017 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 tccctctccctccctcctcct 29 ||||||||||||||||||||| Sbjct: 10630 tccctctccctccctcctcct 10650
>gb|AC118627.6| Mus musculus chromosome 15, clone RP24-91E8, complete sequence Length = 256158 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 ctctccctccctcctcctgct 32 ||||||||||||||||||||| Sbjct: 158006 ctctccctccctcctcctgct 157986
>gb|AC137124.17| Mus musculus chromosome 3, clone RP24-229P11, complete sequence Length = 172081 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 9 tccctctccctccctcctcct 29 ||||||||||||||||||||| Sbjct: 43107 tccctctccctccctcctcct 43087
>ref|NM_010096.2| Mus musculus early B-cell factor 3 (Ebf3), mRNA Length = 4842 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 244 ccgtccgcagctcccggccgccggt 268 ||||||||||| ||||||||||||| Sbjct: 344 ccgtccgcagcgcccggccgccggt 368
>gb|AC119219.6| Mus musculus chromosome 12, clone RP24-201C18, complete sequence Length = 187098 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 53 cccacctcccccaccgcagcagctc 77 |||||||||||||||||||| |||| Sbjct: 85119 cccacctcccccaccgcagcggctc 85143
>gb|AY302564.1| Mus musculus clone gap1 Hprt gene, partial sequence Length = 953 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 tccctctccctccctcctcct 29 ||||||||||||||||||||| Sbjct: 411 tccctctccctccctcctcct 431
>gb|AC135639.4| Mus musculus BAC clone RP23-330O16 from chromosome 7, complete sequence Length = 217404 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 244 ccgtccgcagctcccggccgccggt 268 ||||||||||| ||||||||||||| Sbjct: 15747 ccgtccgcagcgcccggccgccggt 15771
>gb|AC131748.3| Mus musculus BAC clone RP23-42A17 from 12, complete sequence Length = 215972 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 53 cccacctcccccaccgcagcagctc 77 |||||||||||||||||||| |||| Sbjct: 186639 cccacctcccccaccgcagcggctc 186615
>emb|AL031726.23|HS1018K9 Human DNA sequence from clone RP5-1018K9 on chromosome 1q23.2-24.3 Contains the 5' end of a novel gene, a novel gene, the ATP1B1 gene for Na+/K+ transporting ATPase beta 1 polypeptide, the 3' end of the NME7 gene for protein expressed in non-metastatic cells 7 (nucleoside-diphosphate kinase) and a CpG island, complete sequence Length = 153624 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 246 gtccgcagctcccggccgccg 266 ||||||||||||||||||||| Sbjct: 66686 gtccgcagctcccggccgccg 66706
>gb|AC102274.20| Mus musculus chromosome 3, clone RP24-286L19, complete sequence Length = 183113 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 9 tccctctccctccctcctcct 29 ||||||||||||||||||||| Sbjct: 137077 tccctctccctccctcctcct 137057
>emb|AL606687.3|OSJN00087 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K11, complete sequence Length = 147806 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 355 gattggcagaatatggtaatt 375 ||||||||||||||||||||| Sbjct: 35555 gattggcagaatatggtaatt 35535
>gb|AC161204.7| Mus musculus chromosome 3, clone RP23-479L7, complete sequence Length = 170814 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 tccctctccctccctcctcct 29 ||||||||||||||||||||| Sbjct: 90106 tccctctccctccctcctcct 90126
>dbj|AK220542.1| Mus musculus mRNA for mKIAA4201 protein Length = 4842 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 244 ccgtccgcagctcccggccgccggt 268 ||||||||||| ||||||||||||| Sbjct: 344 ccgtccgcagcgcccggccgccggt 368
>dbj|AK057680.1| Homo sapiens cDNA FLJ33118 fis, clone TRACH2001347, moderately similar to 72 KDA TYPE IV COLLAGENASE PRECURSOR (EC 3.4.24.24) Length = 2163 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 tccctctccctccctcctcct 29 ||||||||||||||||||||| Sbjct: 1237 tccctctccctccctcctcct 1257
>gb|AC092352.2| Homo sapiens chromosome 16 clone RP11-2M17, complete sequence Length = 176117 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 9 tccctctccctccctcctcct 29 ||||||||||||||||||||| Sbjct: 48553 tccctctccctccctcctcct 48533
>gb|AC158534.2| Mus musculus BAC clone RP23-32O6 from chromosome 7, complete sequence Length = 242359 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 244 ccgtccgcagctcccggccgccggt 268 ||||||||||| ||||||||||||| Sbjct: 1896 ccgtccgcagcgcccggccgccggt 1872
>gb|AC131791.4| Mus musculus BAC clone RP24-462N24 from chromosome 7, complete sequence Length = 178072 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 244 ccgtccgcagctcccggccgccggt 268 ||||||||||| ||||||||||||| Sbjct: 18536 ccgtccgcagcgcccggccgccggt 18512
>dbj|AK012661.1| Mus musculus 10, 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2810003K23 product:hypothetical protein, full insert sequence Length = 1361 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 tccctctccctccctcctcct 29 ||||||||||||||||||||| Sbjct: 1000 tccctctccctccctcctcct 1020
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 355 gattggcagaatatggtaatt 375 ||||||||||||||||||||| Sbjct: 28028329 gattggcagaatatggtaatt 28028309 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ccctctccctccctcctcct 29 |||||||||||||||||||| Sbjct: 1033576 ccctctccctccctcctcct 1033557
>gb|AC155843.6| Mus musculus 6 BAC RP24-89H23 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 210908 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 8 ttccctctccctccctcctcc 28 ||||||||||||||||||||| Sbjct: 112474 ttccctctccctccctcctcc 112494
>gb|AC007336.6| Homo sapiens chromosome 16 clone RP11-212I21, complete sequence Length = 193963 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 tccctctccctccctcctcct 29 ||||||||||||||||||||| Sbjct: 103308 tccctctccctccctcctcct 103328
>gb|AC122769.11| Mus musculus chromosome 15, clone RP24-153A12, complete sequence Length = 150945 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 9 tccctctccctccctcctcct 29 ||||||||||||||||||||| Sbjct: 4088 tccctctccctccctcctcct 4068
>emb|BX649621.5| Mouse DNA sequence from clone RP23-173F3 on chromosome X, complete sequence Length = 195039 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 tccctctccctccctcctcct 29 ||||||||||||||||||||| Sbjct: 107866 tccctctccctccctcctcct 107886
>dbj|AK065413.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013021I12, full insert sequence Length = 3799 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 355 gattggcagaatatggtaatt 375 ||||||||||||||||||||| Sbjct: 341 gattggcagaatatggtaatt 361
>emb|AL672242.12| Mouse DNA sequence from clone RP23-83P17 on chromosome 17, complete sequence Length = 222709 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 5 ttgttccctctccctccctcc 25 ||||||||||||||||||||| Sbjct: 93598 ttgttccctctccctccctcc 93578
>emb|AL583892.13| Mouse DNA sequence from clone RP23-32G7 on chromosome 15, complete sequence Length = 216733 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 53 cccacctcccccaccgcagcagctc 77 |||||||||||||||||||| |||| Sbjct: 5308 cccacctcccccaccgcagcggctc 5332
>gb|M25161.1|HUMNAKATP1 Human Na,K-ATPase beta subunit (ATP1B) gene, exons 1 and 2 Length = 7675 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 246 gtccgcagctcccggccgccg 266 ||||||||||||||||||||| Sbjct: 1760 gtccgcagctcccggccgccg 1780
>emb|AL591204.14| Mouse DNA sequence from clone RP23-28C17 on chromosome 11, complete sequence Length = 148846 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 9 tccctctccctccctcctcct 29 ||||||||||||||||||||| Sbjct: 62694 tccctctccctccctcctcct 62674
>gb|AC167816.4| Mus musculus BAC clone RP23-317F20 from chromosome 9, complete sequence Length = 198915 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 tccctctccctccctcctcc 28 |||||||||||||||||||| Sbjct: 154816 tccctctccctccctcctcc 154835
>gb|AC165418.6| Mus musculus chromosome 7, clone RP23-148M16, complete sequence Length = 205525 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ccctctccctccctcctcct 29 |||||||||||||||||||| Sbjct: 63710 ccctctccctccctcctcct 63729
>gb|BC085500.1| Mus musculus Iroquois related homeobox 3 (Drosophila), mRNA (cDNA clone MGC:102148 IMAGE:30539191), complete cds Length = 2079 Score = 40.1 bits (20), Expect = 5.2 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 230 ctgccgcctccacc-ccgtccgcagctcccgg 260 |||||||||||||| ||| ||||||||||||| Sbjct: 223 ctgccgcctccaccgccgcccgcagctcccgg 192
>gb|CP000081.1| Leishmania major chromosome 35, complete sequence Length = 2090491 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 gggtccctgccgcctccacc 243 |||||||||||||||||||| Sbjct: 459411 gggtccctgccgcctccacc 459430
>gb|AC116075.5| Rattus norvegicus 6 BAC CH230-139H23 (Children's Hospital Oakland Research Institute) complete sequence Length = 153441 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 cccacctcccccaccgcagc 72 |||||||||||||||||||| Sbjct: 68897 cccacctcccccaccgcagc 68878
>gb|AC124227.21| Mus musculus chromosome 1, clone RP23-118M13, complete sequence Length = 220762 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 acctaccaacccacctcccc 63 |||||||||||||||||||| Sbjct: 3412 acctaccaacccacctcccc 3393
>gb|AC110261.25| Mus musculus chromosome 1, clone RP23-289I3, complete sequence Length = 213116 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 acctaccaacccacctcccc 63 |||||||||||||||||||| Sbjct: 48984 acctaccaacccacctcccc 49003
>ref|NM_008393.2| Mus musculus Iroquois related homeobox 3 (Drosophila) (Irx3), mRNA Length = 2079 Score = 40.1 bits (20), Expect = 5.2 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 230 ctgccgcctccacc-ccgtccgcagctcccgg 260 |||||||||||||| ||| ||||||||||||| Sbjct: 223 ctgccgcctccaccgccgcccgcagctcccgg 192
>gb|AC183274.3| Pan troglodytes BAC clone CH251-156F5 from chromosome 7, complete sequence Length = 163934 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 tccctctccctccctcctcc 28 |||||||||||||||||||| Sbjct: 15062 tccctctccctccctcctcc 15081
>gb|AC137113.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0006N14, complete sequence Length = 155730 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 ccgccgccatcgcccgcgtc 198 |||||||||||||||||||| Sbjct: 40377 ccgccgccatcgcccgcgtc 40396
>gb|AC124749.5| Mus musculus BAC clone RP23-262G23 from chromosome 5, complete sequence Length = 209986 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 ttccctctccctccctcctc 27 |||||||||||||||||||| Sbjct: 92697 ttccctctccctccctcctc 92678
>gb|AC154316.3| Mus musculus BAC clone RP23-338D3 from chromosome 14, complete sequence Length = 210286 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 tccctctccctccctcctcc 28 |||||||||||||||||||| Sbjct: 173905 tccctctccctccctcctcc 173924
>gb|AC100052.10| Mus musculus chromosome 8, clone RP23-32L24, complete sequence Length = 220425 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 2 cctttgttccctctccctccctcc 25 |||||| ||||||||||||||||| Sbjct: 68316 cctttgctccctctccctccctcc 68339
>gb|AC165155.2| Mus musculus BAC clone RP23-293N22 from chromosome 14, complete sequence Length = 226292 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 10 ccctctccctccctcctcctgctg 33 ||||| |||||||||||||||||| Sbjct: 205909 ccctccccctccctcctcctgctg 205886
>gb|AC151834.7| Mus musculus BAC clone RP23-382M10 from chromosome 8, complete sequence Length = 208404 Score = 40.1 bits (20), Expect = 5.2 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 230 ctgccgcctccacc-ccgtccgcagctcccgg 260 |||||||||||||| ||| ||||||||||||| Sbjct: 134179 ctgccgcctccaccgccgcccgcagctcccgg 134210
>ref|XM_838118.1| Leishmania major strain Friedlin hypothetical protein (LMJ_1034) partial mRNA Length = 1299 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 gggtccctgccgcctccacc 243 |||||||||||||||||||| Sbjct: 992 gggtccctgccgcctccacc 1011
>ref|XM_746255.1| Aspergillus fumigatus Af293 3-ketosteroid-delta-1-dehydrogenase (Afu4g14850) partial mRNA Length = 1791 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 cctaccaacccacctccccc 64 |||||||||||||||||||| Sbjct: 30 cctaccaacccacctccccc 49
>gb|AC124557.4| Mus musculus BAC clone RP23-247H15 from chromosome 19, complete sequence Length = 178544 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 tccctctccctccctcctcc 28 |||||||||||||||||||| Sbjct: 41594 tccctctccctccctcctcc 41613
>gb|AC069152.5| Homo sapiens BAC clone RP11-331L17 from UL, complete sequence Length = 191433 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 tccctctccctccctcctcc 28 |||||||||||||||||||| Sbjct: 99147 tccctctccctccctcctcc 99128
>gb|AC137744.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0074L11, complete sequence Length = 180703 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 tccctctccctccctcctcc 28 |||||||||||||||||||| Sbjct: 16074 tccctctccctccctcctcc 16093
>gb|AC098716.2| Mus musculus BAC clone RP23-2F19 from 9, complete sequence Length = 214654 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 tgttccctctccctccctcc 25 |||||||||||||||||||| Sbjct: 46305 tgttccctctccctccctcc 46286
>gb|AC006015.5| Homo sapiens PAC clone RP5-965K10 from 7, complete sequence Length = 112417 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 tccctctccctccctcctcc 28 |||||||||||||||||||| Sbjct: 64767 tccctctccctccctcctcc 64748
>gb|AC093376.5| Homo sapiens BAC clone RP11-147A22 from 7, complete sequence Length = 176162 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 tccctctccctccctcctcc 28 |||||||||||||||||||| Sbjct: 104678 tccctctccctccctcctcc 104659
>gb|BC024893.1| Mus musculus ornithine transcarbamylase, mRNA (cDNA clone MGC:28946 IMAGE:4196455), complete cds Length = 3011 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 367 atggtaattgatcagttttg 386 |||||||||||||||||||| Sbjct: 1449 atggtaattgatcagttttg 1430
>gb|AC091624.3| Canis familiaris clone RP81-117B1, complete sequence Length = 174712 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 ctccctccctcctcctgctg 33 |||||||||||||||||||| Sbjct: 162411 ctccctccctcctcctgctg 162430
>emb|AL445258.4| Human DNA sequence from clone RP11-269F10 on chromosome Xq27.1-27.3 Contains STSs and GSSs, complete sequence Length = 175483 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 ttccctctccctccctcctc 27 |||||||||||||||||||| Sbjct: 129922 ttccctctccctccctcctc 129903
>gb|AC145450.4| Mus musculus strain C57BL/6J clone rp23-430i3, complete sequence Length = 208207 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 tctccctccctcctcctgct 32 |||||||||||||||||||| Sbjct: 6285 tctccctccctcctcctgct 6304
>emb|AL353736.11| Human DNA sequence from clone RP11-412P1 on chromosome 9 Contains the 3' end of the CDK5RAP2 gene for CDK5 regulatory subunit associated protein 2 (C48), complete sequence Length = 148875 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ccctctccctccctcctcct 29 |||||||||||||||||||| Sbjct: 106737 ccctctccctccctcctcct 106718
>emb|AL137878.11| Human DNA sequence from clone RP11-145J3 on chromosome 13 Contains the 3' end of the EPSTI1 gene for epithelial stromal interaction 1 (breast), a novel gene and a pseudogene, complete sequence Length = 87358 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 tctccctccctcctcctgct 32 |||||||||||||||||||| Sbjct: 59553 tctccctccctcctcctgct 59572
>emb|AL118508.27|HSJ737E23 Human DNA sequence from clone RP4-737E23 on chromosome 20p11.1-11.23 Contains the gene complement component C1q receptor (C1QR), a putative novel gene, ESTs, STSs and GSSs, complete sequence Length = 123832 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 tccctctccctccctcctcc 28 |||||||||||||||||||| Sbjct: 8807 tccctctccctccctcctcc 8826
>emb|Y15001.1|MMIRX3 Mus musculus mRNA for iroquois homeobox protein 3 Length = 1937 Score = 40.1 bits (20), Expect = 5.2 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 230 ctgccgcctccacc-ccgtccgcagctcccgg 260 |||||||||||||| ||| ||||||||||||| Sbjct: 89 ctgccgcctccaccgccgcccgcagctcccgg 58
>gb|AC163635.5| Mus musculus BAC clone RP23-183F13 from chromosome 17, complete sequence Length = 185844 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 tccctctccctccctcctcc 28 |||||||||||||||||||| Sbjct: 47760 tccctctccctccctcctcc 47779
>emb|AL939123.1|SCO939123 Streptomyces coelicolor A3(2) complete genome; segment 20/29 Length = 300100 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 ccgcagctcccggccgccgg 267 |||||||||||||||||||| Sbjct: 242134 ccgcagctcccggccgccgg 242115
>emb|AL606631.2|OSJN00069 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0050O03, complete sequence Length = 140948 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ccctctccctccctcctcct 29 |||||||||||||||||||| Sbjct: 113295 ccctctccctccctcctcct 113276
>emb|AJ001205.3|SCO001205 Streptomyces coelicolor A3(2) glycogen metabolism clusterI Length = 9589 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 ccgcagctcccggccgccgg 267 |||||||||||||||||||| Sbjct: 2774 ccgcagctcccggccgccgg 2793
>emb|BX649539.6| Mouse DNA sequence from clone RP24-371A24 on chromosome 4 Contains a ribosomal protein S2 (Rps2) pseudogene, complete sequence Length = 198964 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 tccctctccctccctcctcc 28 |||||||||||||||||||| Sbjct: 183255 tccctctccctccctcctcc 183236
>gb|AC026970.7| Homo sapiens chromosome 11, clone RP11-472K20, complete sequence Length = 132987 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 ttccctctccctccctcctc 27 |||||||||||||||||||| Sbjct: 94458 ttccctctccctccctcctc 94439
>dbj|AK091052.1| Homo sapiens cDNA FLJ33733 fis, clone BRAWH2018267 Length = 3675 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 ttccctctccctccctcctc 27 |||||||||||||||||||| Sbjct: 566 ttccctctccctccctcctc 547
>gb|AC068327.14| Homo sapiens chromosome 15, clone RP11-394G8, complete sequence Length = 177539 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 14 ctccctccctcctcctgctgaccc 37 |||||||||||| ||||||||||| Sbjct: 135061 ctccctccctccacctgctgaccc 135084
>gb|AC105014.5| Homo sapiens chromosome 15, clone RP11-466P9, complete sequence Length = 189047 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 cctctccctccctcctcctg 30 |||||||||||||||||||| Sbjct: 109452 cctctccctccctcctcctg 109471
>gb|AC026583.10| Homo sapiens chromosome 15, clone RP11-20C17, complete sequence Length = 175472 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 14 ctccctccctcctcctgctgaccc 37 |||||||||||| ||||||||||| Sbjct: 13943 ctccctccctccacctgctgaccc 13966
>gb|AC092132.2| Homo sapiens chromosome 16 clone RP11-204E4, complete sequence Length = 166533 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 tccctctccctccctcctcc 28 |||||||||||||||||||| Sbjct: 157752 tccctctccctccctcctcc 157733
>dbj|AK143023.1| Mus musculus 0 day neonate lung cDNA, RIKEN full-length enriched library, clone:E030042N12 product:Iroquois related homeobox 3 (Drosophila), full insert sequence Length = 2265 Score = 40.1 bits (20), Expect = 5.2 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 230 ctgccgcctccacc-ccgtccgcagctcccgg 260 |||||||||||||| ||| ||||||||||||| Sbjct: 405 ctgccgcctccaccgccgcccgcagctcccgg 374
>gb|AC096536.2| Homo sapiens chromosome 1 clone RP11-67L3, complete sequence Length = 155925 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 tccctctccctccctcctcc 28 |||||||||||||||||||| Sbjct: 134776 tccctctccctccctcctcc 134795
>gb|AF246978.2|AF246978 Mus musculus transcription factor Stat5a (Stat5a) and transcription factor Stat3 (Stat3) genes, complete cds Length = 83848 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 tccctctccctccctcctcc 28 |||||||||||||||||||| Sbjct: 39400 tccctctccctccctcctcc 39381
>gb|AC013531.10| Homo sapiens, clone RP11-114M16, complete sequence Length = 38598 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 cctctccctccctcctcctg 30 |||||||||||||||||||| Sbjct: 37064 cctctccctccctcctcctg 37045
>gb|AC162182.2| Mus musculus BAC clone RP23-73B23 from chromosome 17, complete sequence Length = 205221 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 tccctctccctccctcctcc 28 |||||||||||||||||||| Sbjct: 92568 tccctctccctccctcctcc 92549
>gb|AC154454.2| Mus musculus BAC clone RP24-173H15 from chromosome 13, complete sequence Length = 181147 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 tccctctccctccctcctcc 28 |||||||||||||||||||| Sbjct: 18581 tccctctccctccctcctcc 18600
>gb|AC145163.5| Mus musculus BAC clone RP24-238C5 from chromosome 12, complete sequence Length = 194429 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 tccctctccctccctcctcc 28 |||||||||||||||||||| Sbjct: 135130 tccctctccctccctcctcc 135111
>gb|DQ066860.1| Strongylocentrotus purpuratus clone A30 extracellular protein (endo16) gene, promoter region Length = 2294 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ccctctccctccctcctcct 29 |||||||||||||||||||| Sbjct: 169 ccctctccctccctcctcct 188
>gb|DQ066859.1| Strongylocentrotus purpuratus clone A29 extracellular protein (endo16) gene, promoter region Length = 2297 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ccctctccctccctcctcct 29 |||||||||||||||||||| Sbjct: 169 ccctctccctccctcctcct 188
>gb|DQ066858.1| Strongylocentrotus purpuratus clone A28 extracellular protein (endo16) gene, promoter region Length = 2291 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ccctctccctccctcctcct 29 |||||||||||||||||||| Sbjct: 169 ccctctccctccctcctcct 188
>gb|DQ066853.1| Strongylocentrotus purpuratus clone A23 extracellular protein (endo16) gene, promoter region Length = 2033 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ccctctccctccctcctcct 29 |||||||||||||||||||| Sbjct: 165 ccctctccctccctcctcct 184
>gb|AC101937.8| Mus musculus chromosome 1, clone RP24-87K13, complete sequence Length = 195175 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ccctctccctccctcctcct 29 |||||||||||||||||||| Sbjct: 116737 ccctctccctccctcctcct 116756
>tpg|BK000627.1| TPA: TPA_exp: Homo sapiens equilibrative nucleoside transporter 4 (ENT4) gene, complete cds Length = 25000 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 tccctctccctccctcctcc 28 |||||||||||||||||||| Sbjct: 1347 tccctctccctccctcctcc 1328
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 tcgcccgcgtcccccctttcgctc 211 |||||||||||||| ||||||||| Sbjct: 2668115 tcgcccgcgtcccctctttcgctc 2668138
>gb|BC020464.1| Mus musculus Iroquois related homeobox 3 (Drosophila), mRNA (cDNA clone IMAGE:3482572) Length = 1391 Score = 40.1 bits (20), Expect = 5.2 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 230 ctgccgcctccacc-ccgtccgcagctcccgg 260 |||||||||||||| ||| ||||||||||||| Sbjct: 302 ctgccgcctccaccgccgcccgcagctcccgg 271
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 tccctctccctccctcctcc 28 |||||||||||||||||||| Sbjct: 21664021 tccctctccctccctcctcc 21664040 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 ccgccgccatcgcccgcgtc 198 |||||||||||||||||||| Sbjct: 15184744 ccgccgccatcgcccgcgtc 15184763
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 ttccctctccctccctcctc 27 |||||||||||||||||||| Sbjct: 33795954 ttccctctccctccctcctc 33795935
>gb|AC022298.31|AC022298 Mus musculus BAC RP23-423C8 (Roswell Park Cancer Institute Mouse BAC Library) complete sequence Length = 112209 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 tccctctccctccctcctcc 28 |||||||||||||||||||| Sbjct: 44981 tccctctccctccctcctcc 45000
>gb|AC008236.4|AC008236 Drosophila melanogaster, chromosome 3R, region 95A-95A, BAC clone BACR24C15, complete sequence Length = 162923 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 caacccacctcccccaccgc 69 |||||||||||||||||||| Sbjct: 23902 caacccacctcccccaccgc 23921
>emb|BX813333.7| Mouse DNA sequence from clone RP23-255A6 on chromosome 2, complete sequence Length = 163063 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 ttccctctccctccctcctc 27 |||||||||||||||||||| Sbjct: 118908 ttccctctccctccctcctc 118927
>emb|AL670860.6| Mouse DNA sequence from clone RP23-50K11 on chromosome 2, complete sequence Length = 83914 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 tccctctccctccctcctcc 28 |||||||||||||||||||| Sbjct: 41050 tccctctccctccctcctcc 41031
>gb|AC008235.4|AC008235 Drosophila melanogaster, chromosome 3R, region 94F-95A, BAC clone BACR15B19, complete sequence Length = 175669 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 caacccacctcccccaccgc 69 |||||||||||||||||||| Sbjct: 136351 caacccacctcccccaccgc 136370
>gb|AC134550.5| Mus musculus BAC clone RP24-272L6 from chromosome 3, complete sequence Length = 164204 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ccctctccctccctcctcct 29 |||||||||||||||||||| Sbjct: 97026 ccctctccctccctcctcct 97007
>gb|AC153575.5| Mus musculus 6 BAC RP23-157O3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 215023 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 ttccctctccctccctcctc 27 |||||||||||||||||||| Sbjct: 190878 ttccctctccctccctcctc 190897
>gb|AC073918.13|AC073918 Mus musculus 11 BAC RP23-362J7 (Roswell Park Cancer Institute Mouse BAC Library) complete sequence Length = 195667 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 tccctctccctccctcctcc 28 |||||||||||||||||||| Sbjct: 64554 tccctctccctccctcctcc 64573
>gb|AC132189.13| Mus musculus chromosome 12, clone RP24-95M20, complete sequence Length = 203534 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 tccctctccctccctcctcc 28 |||||||||||||||||||| Sbjct: 202664 tccctctccctccctcctcc 202645
>gb|AC122133.4| Homo sapiens BAC clone RP11-220H4 from 7, complete sequence Length = 191103 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 tccctctccctccctcctcc 28 |||||||||||||||||||| Sbjct: 16127 tccctctccctccctcctcc 16146
>gb|AC009469.4| Homo sapiens BAC clone RP11-20N16 from 2, complete sequence Length = 168448 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 tgttccctctccctccctcc 25 |||||||||||||||||||| Sbjct: 139481 tgttccctctccctccctcc 139462
>gb|AC153493.6| Mus musculus 10 BAC RP23-23J2 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 220442 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 tccctctccctccctcctcc 28 |||||||||||||||||||| Sbjct: 104811 tccctctccctccctcctcc 104830
>gb|AC079042.31| Mus musculus strain C57BL/6J chromosome 3 clone rp23-313f7, complete sequence Length = 197424 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 tccctctccctccctcctcc 28 |||||||||||||||||||| Sbjct: 52411 tccctctccctccctcctcc 52392
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 aacccacctcccccaccgca 70 |||||||||||||||||||| Sbjct: 2299360 aacccacctcccccaccgca 2299379
>emb|AL929215.18| Mouse DNA sequence from clone RP23-8L8 on chromosome 2, complete sequence Length = 159804 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ccctctccctccctcctcct 29 |||||||||||||||||||| Sbjct: 21701 ccctctccctccctcctcct 21682
>dbj|AP005115.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0700F06 Length = 139277 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 ttccctctccctccctcctc 27 |||||||||||||||||||| Sbjct: 126821 ttccctctccctccctcctc 126802
>dbj|AP004094.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1695_H09 Length = 114721 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 ttccctctccctccctcctc 27 |||||||||||||||||||| Sbjct: 12532 ttccctctccctccctcctc 12513
>gb|AC154222.2| Mus musculus BAC clone RP24-375M13 from 13, complete sequence Length = 169114 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 tccctctccctccctcctcc 28 |||||||||||||||||||| Sbjct: 154699 tccctctccctccctcctcc 154718
>gb|AC155334.7| Mus musculus 6 BAC RP24-420O24 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 153509 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 cctccctcctcctgctgacc 36 |||||||||||||||||||| Sbjct: 86666 cctccctcctcctgctgacc 86647
>gb|AE003743.3| Drosophila melanogaster chromosome 3R, section 81 of 118 of the complete sequence Length = 210258 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 caacccacctcccccaccgc 69 |||||||||||||||||||| Sbjct: 144657 caacccacctcccccaccgc 144676
>gb|AC129307.5| Mus musculus BAC clone RP24-200K10 from chromosome 8, complete sequence Length = 200660 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 2 cctttgttccctctccctccctcc 25 |||||| ||||||||||||||||| Sbjct: 41085 cctttgctccctctccctccctcc 41062
>gb|AC103408.8| Mus musculus chromosome 3, clone RP23-442M1, complete sequence Length = 187860 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 2 cctttgttccctctccctccctcc 25 |||||||||| ||||||||||||| Sbjct: 162366 cctttgttccttctccctccctcc 162389
>gb|AC162879.7| Mus musculus chromosome 1, clone RP24-169N15, complete sequence Length = 142655 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ccctctccctccctcctcct 29 |||||||||||||||||||| Sbjct: 45853 ccctctccctccctcctcct 45872
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 tccctctccctccctcctcc 28 |||||||||||||||||||| Sbjct: 21974220 tccctctccctccctcctcc 21974239 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 ccgccgccatcgcccgcgtc 198 |||||||||||||||||||| Sbjct: 15266243 ccgccgccatcgcccgcgtc 15266262
>gb|AC165261.3| Mus musculus BAC clone RP23-103O7 from chromosome 9, complete sequence Length = 201058 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 tccctctccctccctcctcc 28 |||||||||||||||||||| Sbjct: 68254 tccctctccctccctcctcc 68235
>emb|AL583722.6|CNS07EFU Human chromosome 14 DNA sequence BAC R-982M15 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 205928 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 ttccctctccctccctcctc 27 |||||||||||||||||||| Sbjct: 100461 ttccctctccctccctcctc 100442
>gb|AC122424.4| Mus musculus BAC clone RP24-173E19 from 8, complete sequence Length = 175181 Score = 40.1 bits (20), Expect = 5.2 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 230 ctgccgcctccacc-ccgtccgcagctcccgg 260 |||||||||||||| ||| ||||||||||||| Sbjct: 166046 ctgccgcctccaccgccgcccgcagctcccgg 166015
>gb|AC161879.5| Mus musculus BAC clone RP23-264A15 from chromosome 1, complete sequence Length = 206995 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ccctctccctccctcctcct 29 |||||||||||||||||||| Sbjct: 87612 ccctctccctccctcctcct 87593
>emb|CT030637.9| Mouse DNA sequence from clone RP23-123H11 on chromosome 14, complete sequence Length = 239552 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 tccctctccctccctcctcc 28 |||||||||||||||||||| Sbjct: 133384 tccctctccctccctcctcc 133365
>gb|BC067195.1| Mus musculus cDNA clone IMAGE:5716597, containing frame-shift errors Length = 2375 Score = 40.1 bits (20), Expect = 5.2 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 230 ctgccgcctccacc-ccgtccgcagctcccgg 260 |||||||||||||| ||| ||||||||||||| Sbjct: 503 ctgccgcctccaccgccgcccgcagctcccgg 472
>gb|AC003975.1|AC003975 Human Cosmid g5129s420 from 7q31.3, complete sequence Length = 41025 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 ctccctccctcctcctgctg 33 |||||||||||||||||||| Sbjct: 36086 ctccctccctcctcctgctg 36105
>gb|AC149091.3| Mus musculus BAC clone RP23-49P22 from 7, complete sequence Length = 240997 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ccctctccctccctcctcct 29 |||||||||||||||||||| Sbjct: 147874 ccctctccctccctcctcct 147855
>emb|AL929556.14| Mouse DNA sequence from clone RP23-353B17 on chromosome 2, complete sequence Length = 192715 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 tccctctccctccctcctcc 28 |||||||||||||||||||| Sbjct: 84601 tccctctccctccctcctcc 84582
>emb|AL591514.7| Mouse DNA sequence from clone RP23-266L14 on chromosome 11, complete sequence Length = 229872 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 tccctctccctccctcctcc 28 |||||||||||||||||||| Sbjct: 71316 tccctctccctccctcctcc 71335
>emb|AL591466.8| Mouse DNA sequence from clone RP23-279L23 on chromosome 11, complete sequence Length = 239847 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 tccctctccctccctcctcc 28 |||||||||||||||||||| Sbjct: 98869 tccctctccctccctcctcc 98888
>emb|AL732585.8| Mouse DNA sequence from clone RP23-226M2 on chromosome 2, complete sequence Length = 151891 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 tctccctccctcctcctgct 32 |||||||||||||||||||| Sbjct: 91843 tctccctccctcctcctgct 91862
>emb|AL845467.3| Mouse DNA sequence from clone RP23-435G20 on chromosome 2, complete sequence Length = 201400 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ccctctccctccctcctcct 29 |||||||||||||||||||| Sbjct: 98901 ccctctccctccctcctcct 98920
>emb|AL671042.10| Mouse DNA sequence from clone RP23-382O24 on chromosome X, complete sequence Length = 186151 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 367 atggtaattgatcagttttg 386 |||||||||||||||||||| Sbjct: 177818 atggtaattgatcagttttg 177799
>emb|AL731831.17| Mouse DNA sequence from clone RP23-105O13 on chromosome 2, complete sequence Length = 218818 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 ttccctctccctccctcctc 27 |||||||||||||||||||| Sbjct: 102039 ttccctctccctccctcctc 102058
>emb|AL669910.15| Mouse DNA sequence from clone RP23-119H5 on chromosome 2, complete sequence Length = 158275 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 ttccctctccctccctcctc 27 |||||||||||||||||||| Sbjct: 133171 ttccctctccctccctcctc 133152
>gb|AC090692.9| Homo sapiens chromosome 11, clone RP11-698N11, complete sequence Length = 179494 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 ttccctctccctccctcctc 27 |||||||||||||||||||| Sbjct: 25836 ttccctctccctccctcctc 25817
>emb|AL671877.15| Mouse DNA sequence from clone RP23-214E3 on chromosome 3, complete sequence Length = 146015 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 tccctctccctccctcctcc 28 |||||||||||||||||||| Sbjct: 52132 tccctctccctccctcctcc 52151 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,185,821 Number of Sequences: 3902068 Number of extensions: 3185821 Number of successful extensions: 113506 Number of sequences better than 10.0: 134 Number of HSP's better than 10.0 without gapping: 129 Number of HSP's successfully gapped in prelim test: 8 Number of HSP's that attempted gapping in prelim test: 112691 Number of HSP's gapped (non-prelim): 829 length of query: 388 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 366 effective length of database: 17,147,199,772 effective search space: 6275875116552 effective search space used: 6275875116552 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
