ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl12g03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1FTSK1_RALSO (Q8XRH0) DNA translocase ftsK 1 27 9.3

>FTSK1_RALSO (Q8XRH0) DNA translocase ftsK 1|
          Length = 959

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 14/47 (29%), Positives = 18/47 (38%)
 Frame = +2

Query: 110 DEQPPQELPAPHXXXXXXXXXXXXXXEQALL*GPAPARASQAQDEPP 250
           + +P  E PAP                +A L  P PA A +A D  P
Sbjct: 374 EAEPEAEAPAPESVAPALQEAEAATAAEAPLPAPEPAPAIEADDAAP 420


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.312    0.140    0.497 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,217,912
Number of Sequences: 219361
Number of extensions: 215644
Number of successful extensions: 418
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 387
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 418
length of database: 80,573,946
effective HSP length: 98
effective length of database: 59,076,568
effective search space used: 1417837632
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
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