Clone Name | bastl12f10 |
---|---|
Clone Library Name | barley_pub |
>TSC10_NEUCR (Q7RZR2) 3-ketodihydrosphingosine reductase tsc-10 (EC 1.1.1.102)| (3-dehydrosphinganine reductase) (KDS reductase) Length = 969 Score = 33.5 bits (75), Expect = 0.29 Identities = 24/98 (24%), Positives = 40/98 (40%) Frame = -3 Query: 459 PAAPSGVGPHEPQQAQNHGELERAEPDHLAGQLPQQEQYEHHERGPERRRVAVEEDMVPP 280 P AP GV PQ H + + + H Q QQ+Q + H++ + ++ + DM+ Sbjct: 632 PGAPGGVPQPSPQDHSQHQQHQHQQQQH---QHHQQQQQQQHQQQQQHQQQQQQADML-Q 687 Query: 279 GVAVPXXXXXXXXXXXXXXLPEAARRGQPRLERDGRHE 166 G+ P P A GQP+ + H+ Sbjct: 688 GLGQP-----QAHPHQHQHQPPVAPMGQPQQMQPSPHQ 720
>HRS_DROME (Q960X8) Hepatocyte growth factor-regulated tyrosine kinase| substrate Length = 760 Score = 33.1 bits (74), Expect = 0.38 Identities = 18/72 (25%), Positives = 31/72 (43%), Gaps = 4/72 (5%) Frame = -3 Query: 468 PHLP--AAPSGVGPHEPQQ--AQNHGELERAEPDHLAGQLPQQEQYEHHERGPERRRVAV 301 P +P P + +PQQ Q ++ +P + GQ PQQ + + P+ V + Sbjct: 646 PQIPFQPQPQQIPGQQPQQIPGQQPQQIPGQQPQQIPGQQPQQIPVQQPQPQPQMGHVML 705 Query: 300 EEDMVPPGVAVP 265 ++ PP P Sbjct: 706 QQHQAPPAAQAP 717
>TENS_CHICK (Q04205) Tensin| Length = 1744 Score = 31.6 bits (70), Expect = 1.1 Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Frame = +3 Query: 330 AHGAHTAPAEG-ADRQGGLA-PRAPVRHDSGLAGAHGGLRRWELQGG 464 AH + + PA G A + LA P+AP R S GL W+ QGG Sbjct: 703 AHRSQSFPAVGTAKYEANLALPQAPARSTSSREAVQRGLNSWQQQGG 749
>LEGA_PEA (P02857) Legumin A precursor [Contains: Legumin A alpha chain| (Legumin A acidic chain); Legumin A beta chain (Legumin A basic chain)] Length = 517 Score = 31.2 bits (69), Expect = 1.4 Identities = 17/60 (28%), Positives = 26/60 (43%) Frame = -3 Query: 471 GPHLPAAPSGVGPHEPQQAQNHGELERAEPDHLAGQLPQQEQYEHHERGPERRRVAVEED 292 G + + P H+ Q E E +P H G ++E+ E ER P +R EE+ Sbjct: 252 GLSIISPPEKQARHQRGSRQEEDEDEEKQPRHQRGSRQEEEEDEDEERQPRHQRRRGEEE 311
>IE63_HCMVA (P16749) Transcriptional regulator IE63 homolog (Protein UL69)| Length = 744 Score = 30.8 bits (68), Expect = 1.9 Identities = 23/92 (25%), Positives = 29/92 (31%) Frame = -3 Query: 468 PHLPAAPSGVGPHEPQQAQNHGELERAEPDHLAGQLPQQEQYEHHERGPERRRVAVEEDM 289 P + AAP P +PQQ + GELE E A + H V + Sbjct: 592 PMIAAAPPAQPPSQPQQHYSEGELEEDEDSDDASSQDLVRATDRH-----GDTVVYKTTA 646 Query: 288 VPPGVAVPXXXXXXXXXXXXXXLPEAARRGQP 193 VPP P P + G P Sbjct: 647 VPPSPPAPLAGVRSHRGELNLMTPSPSHGGSP 678
>ZBT17_CHICK (Q90625) Zinc finger and BTB domain-containing protein 17 (Zinc| finger protein 151) (Zinc finger protein Z13) (Fragment) Length = 706 Score = 30.0 bits (66), Expect = 3.2 Identities = 26/111 (23%), Positives = 41/111 (36%), Gaps = 5/111 (4%) Frame = -3 Query: 456 AAPSGVGPHEPQQAQNHGELERAEPDHLAGQLPQQEQYEHHERGPERRRVAV---EEDMV 286 A+P+ V P PQ A++ E+ + P P E G E A+ EE+ Sbjct: 93 ASPAAVSPSRPQPAES--EVGNSSPGEKGSDAPSTEARGMELEGKEEEGEAMVEDEEEAK 150 Query: 285 PPGVAVPXXXXXXXXXXXXXXLPEAARR--GQPRLERDGRHEDGHQHQVLA 139 P A P ++ + G+ RL R G + D + + A Sbjct: 151 IPKAAQPKSESKENAEDNESGSTDSGQENSGETRLLRSGTYSDRTESKAYA 201
>CO8A_RABIT (P98136) Complement component C8 alpha chain precursor (Complement| component 8 alpha subunit) Length = 585 Score = 29.6 bits (65), Expect = 4.2 Identities = 9/17 (52%), Positives = 10/17 (58%) Frame = +2 Query: 413 WACWGSWGPTPLGAAGR 463 W+CWGSW P G R Sbjct: 543 WSCWGSWSPCTAGTRER 559
>LEGA2_PEA (P15838) Legumin A2 precursor [Contains: Legumin A2 alpha chain| (Legumin A2 acidic chain); Legumin A2 beta chain (Legumin A2 basic chain)] Length = 520 Score = 29.6 bits (65), Expect = 4.2 Identities = 14/44 (31%), Positives = 23/44 (52%) Frame = -3 Query: 423 QQAQNHGELERAEPDHLAGQLPQQEQYEHHERGPERRRVAVEED 292 +Q ++ E E +P H G ++E+ E ER P +R EE+ Sbjct: 271 RQEEDEDEDEERQPRHQRGSRQEEEEDEDEERQPRHQRRRGEEE 314
>JLP1_YEAST (Q12358) Alpha-ketoglutarate-dependent sulfonate dioxygenase (EC| 1.14.11.-) Length = 412 Score = 29.6 bits (65), Expect = 4.2 Identities = 14/31 (45%), Positives = 18/31 (58%) Frame = +3 Query: 354 AEGADRQGGLAPRAPVRHDSGLAGAHGGLRR 446 AE + RQGG+ RAPV H L H L++ Sbjct: 278 AENSQRQGGIKRRAPVTHIHPLVRVHPVLKK 308
>PTMS_RAT (P04550) Parathymosin (Zinc-binding 11.5 kDa protein)| Length = 101 Score = 29.6 bits (65), Expect = 4.2 Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 2/52 (3%) Frame = -3 Query: 429 EPQQAQNHGELERAEP--DHLAGQLPQQEQYEHHERGPERRRVAVEEDMVPP 280 E + E E AE D G +E+ E + GP R+R A EED P Sbjct: 39 EEENGAEEEEEETAEDGEDDDEGDEEDEEEEEEEDEGPVRKRTAEEEDEADP 90
>PNOC_BOVIN (O62647) Nociceptin precursor [Contains: Neuropeptide 1; Nociceptin| (Orphanin FQ) (PPNOC); Neuropeptide 2] Length = 176 Score = 29.3 bits (64), Expect = 5.5 Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 2/50 (4%) Frame = -3 Query: 417 AQNHGELERAEPDHLAGQL--PQQEQYEHHERGPERRRVAVEEDMVPPGV 274 A+ +L A+PDH+A L P+ + +H +R P R + + PG+ Sbjct: 66 ARGSWQLSPADPDHVAAALDQPRASEMQHLKRMPRVRSLFQRQKRTEPGL 115
>CCG8_NEUCR (Q01306) Clock-controlled protein 8| Length = 661 Score = 29.3 bits (64), Expect = 5.5 Identities = 15/56 (26%), Positives = 26/56 (46%) Frame = -3 Query: 432 HEPQQAQNHGELERAEPDHLAGQLPQQEQYEHHERGPERRRVAVEEDMVPPGVAVP 265 HE QQ Q + + + + A Q QQ Q+ HH++ ++ V V + + P Sbjct: 18 HEHQQHQQYQQPPQHHQHYEAPQHQQQHQHHHHQQQQQQHPVPVPKQEQADNTSAP 73
>VID21_USTMA (Q4P209) Chromatin modification-related protein VID21| Length = 1654 Score = 29.3 bits (64), Expect = 5.5 Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 3/65 (4%) Frame = -3 Query: 459 PAAPSGVGPHEPQQAQNHGELER---AEPDHLAGQLPQQEQYEHHERGPERRRVAVEEDM 289 PAA + + QQ Q +L+ A+ +L Q+ QQ+Q + ++ + + A Sbjct: 1306 PAAAAAAQQQQQQQVQLQSQLQASQAAQMQNLYAQMQQQQQQQQRQQQQQLGQAAAGLAQ 1365 Query: 288 VPPGV 274 V PGV Sbjct: 1366 VRPGV 1370
>SYFB_BIFLO (Q8G5E8) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase beta chain) (PheRS) Length = 869 Score = 29.3 bits (64), Expect = 5.5 Identities = 16/36 (44%), Positives = 20/36 (55%) Frame = -3 Query: 468 PHLPAAPSGVGPHEPQQAQNHGELERAEPDHLAGQL 361 P +PA P GV P + Q A L +PDH+AG L Sbjct: 632 PAIPALPGGVRPTDEQLAALDAGLPE-QPDHVAGIL 666
>AORSN_ASPOR (Q8NK92) Aorsin precursor (EC 3.4.21.-)| Length = 652 Score = 28.9 bits (63), Expect = 7.2 Identities = 17/57 (29%), Positives = 23/57 (40%) Frame = -3 Query: 444 GVGPHEPQQAQNHGELERAEPDHLAGQLPQQEQYEHHERGPERRRVAVEEDMVPPGV 274 G+ Q QNHG L L YE+H R ++ +A E+ VP V Sbjct: 110 GINASRVAQTQNHGWLVFHATSKEIENLFDTTYYEYHNRKTGKKAIACEQYHVPASV 166
>SN1L1_HUMAN (P57059) Serine/threonine-protein kinase SNF1-like kinase 1 (EC| 2.7.11.1) (Serine/threonine-protein kinase SNF1LK) Length = 783 Score = 28.9 bits (63), Expect = 7.2 Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 1/47 (2%) Frame = +3 Query: 318 VRGLAHGAHTAPAEGADRQGGLAP-RAPVRHDSGLAGAHGGLRRWEL 455 ++GLA APA A R GGL+P AP + GA G W L Sbjct: 605 IKGLARQVCQAPASRASR-GGLSPFHAPAQSPGLHGGAAGSREGWSL 650
>FOXJ3_HUMAN (Q9UPW0) Forkhead box protein J3| Length = 622 Score = 28.9 bits (63), Expect = 7.2 Identities = 16/69 (23%), Positives = 24/69 (34%), Gaps = 6/69 (8%) Frame = -3 Query: 468 PHLPAAPSGV------GPHEPQQAQNHGELERAEPDHLAGQLPQQEQYEHHERGPERRRV 307 PH P P G+ PH Q H +L+ P H ++H + P + Sbjct: 381 PHPPHRPHGLPQHPQRSPHPAPHPQQHSQLQSPHPQH-------PSPHQHIQHHPNHQHQ 433 Query: 306 AVEEDMVPP 280 + PP Sbjct: 434 TLTHQAPPP 442
>CO7_PIG (Q9TUQ3) Complement component C7 precursor| Length = 843 Score = 28.9 bits (63), Expect = 7.2 Identities = 9/17 (52%), Positives = 10/17 (58%) Frame = +2 Query: 413 WACWGSWGPTPLGAAGR 463 W+CW SWGP G R Sbjct: 503 WSCWSSWGPCAQGKKTR 519
>SRF_DROME (Q24535) Serum response factor homolog (dSRF) (Protein blistered)| Length = 449 Score = 28.9 bits (63), Expect = 7.2 Identities = 16/56 (28%), Positives = 24/56 (42%) Frame = -3 Query: 459 PAAPSGVGPHEPQQAQNHGELERAEPDHLAGQLPQQEQYEHHERGPERRRVAVEED 292 P AP H PQ A + ++ + Q QQ+Q+ +RG +R ED Sbjct: 65 PPAPQCQTLHSPQHASQQQQQQQQQQQQHQQQQQQQQQHPQQQRGLKRSGSDCYED 120
>CELR3_MOUSE (Q91ZI0) Cadherin EGF LAG seven-pass G-type receptor 3 precursor| Length = 3301 Score = 28.5 bits (62), Expect = 9.4 Identities = 14/41 (34%), Positives = 21/41 (51%) Frame = -3 Query: 471 GPHLPAAPSGVGPHEPQQAQNHGELERAEPDHLAGQLPQQE 349 GPH A S +GP P+ A +H + PD ++P+ E Sbjct: 3262 GPHTTATASALGPSTPRSATSH-SISELSPD---SEVPRSE 3298
>RPTN_HUMAN (Q6XPR3) Repetin| Length = 784 Score = 28.5 bits (62), Expect = 9.4 Identities = 14/41 (34%), Positives = 22/41 (53%) Frame = -3 Query: 435 PHEPQQAQNHGELERAEPDHLAGQLPQQEQYEHHERGPERR 313 P +HG+ ER + D GQ +Q++ HH + PER+ Sbjct: 137 PERQDGDSHHGQPERQDRDSHHGQSEKQDRDSHHSQ-PERQ 176
>RPOA_PSEHT (Q3IJI6) DNA-directed RNA polymerase alpha chain (EC 2.7.7.6) (RNAP| alpha subunit) (Transcriptase alpha chain) (RNA polymerase alpha subunit) Length = 328 Score = 28.5 bits (62), Expect = 9.4 Identities = 13/30 (43%), Positives = 17/30 (56%) Frame = -3 Query: 462 LPAAPSGVGPHEPQQAQNHGELERAEPDHL 373 L A SGVGP Q+ G++ A PDH+ Sbjct: 100 LTLAKSGVGPVTASDIQHDGDVTIANPDHV 129
>IF2_TREPA (O83861) Translation initiation factor IF-2| Length = 842 Score = 28.5 bits (62), Expect = 9.4 Identities = 16/49 (32%), Positives = 19/49 (38%) Frame = -3 Query: 474 RGPHLPAAPSGVGPHEPQQAQNHGELERAEPDHLAGQLPQQEQYEHHER 328 RGP PA G GP P Q G+ Q QY+H +R Sbjct: 177 RGPARPAGRVGSGPRGPAPLQVGAGKPAQNKRSFRGRKQQTYQYQHKDR 225 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 54,339,221 Number of Sequences: 219361 Number of extensions: 961256 Number of successful extensions: 3925 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 3680 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3908 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3188886965 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)