ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl12f10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1TSC10_NEUCR (Q7RZR2) 3-ketodihydrosphingosine reductase tsc-10 (... 33 0.29
2HRS_DROME (Q960X8) Hepatocyte growth factor-regulated tyrosine k... 33 0.38
3TENS_CHICK (Q04205) Tensin 32 1.1
4LEGA_PEA (P02857) Legumin A precursor [Contains: Legumin A alpha... 31 1.4
5IE63_HCMVA (P16749) Transcriptional regulator IE63 homolog (Prot... 31 1.9
6ZBT17_CHICK (Q90625) Zinc finger and BTB domain-containing prote... 30 3.2
7CO8A_RABIT (P98136) Complement component C8 alpha chain precurso... 30 4.2
8LEGA2_PEA (P15838) Legumin A2 precursor [Contains: Legumin A2 al... 30 4.2
9JLP1_YEAST (Q12358) Alpha-ketoglutarate-dependent sulfonate diox... 30 4.2
10PTMS_RAT (P04550) Parathymosin (Zinc-binding 11.5 kDa protein) 30 4.2
11PNOC_BOVIN (O62647) Nociceptin precursor [Contains: Neuropeptide... 29 5.5
12CCG8_NEUCR (Q01306) Clock-controlled protein 8 29 5.5
13VID21_USTMA (Q4P209) Chromatin modification-related protein VID21 29 5.5
14SYFB_BIFLO (Q8G5E8) Phenylalanyl-tRNA synthetase beta chain (EC ... 29 5.5
15AORSN_ASPOR (Q8NK92) Aorsin precursor (EC 3.4.21.-) 29 7.2
16SN1L1_HUMAN (P57059) Serine/threonine-protein kinase SNF1-like k... 29 7.2
17FOXJ3_HUMAN (Q9UPW0) Forkhead box protein J3 29 7.2
18CO7_PIG (Q9TUQ3) Complement component C7 precursor 29 7.2
19SRF_DROME (Q24535) Serum response factor homolog (dSRF) (Protein... 29 7.2
20CELR3_MOUSE (Q91ZI0) Cadherin EGF LAG seven-pass G-type receptor... 28 9.4
21RPTN_HUMAN (Q6XPR3) Repetin 28 9.4
22RPOA_PSEHT (Q3IJI6) DNA-directed RNA polymerase alpha chain (EC ... 28 9.4
23IF2_TREPA (O83861) Translation initiation factor IF-2 28 9.4

>TSC10_NEUCR (Q7RZR2) 3-ketodihydrosphingosine reductase tsc-10 (EC 1.1.1.102)|
           (3-dehydrosphinganine reductase) (KDS reductase)
          Length = 969

 Score = 33.5 bits (75), Expect = 0.29
 Identities = 24/98 (24%), Positives = 40/98 (40%)
 Frame = -3

Query: 459 PAAPSGVGPHEPQQAQNHGELERAEPDHLAGQLPQQEQYEHHERGPERRRVAVEEDMVPP 280
           P AP GV    PQ    H + +  +  H   Q  QQ+Q + H++  + ++   + DM+  
Sbjct: 632 PGAPGGVPQPSPQDHSQHQQHQHQQQQH---QHHQQQQQQQHQQQQQHQQQQQQADML-Q 687

Query: 279 GVAVPXXXXXXXXXXXXXXLPEAARRGQPRLERDGRHE 166
           G+  P               P  A  GQP+  +   H+
Sbjct: 688 GLGQP-----QAHPHQHQHQPPVAPMGQPQQMQPSPHQ 720



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>HRS_DROME (Q960X8) Hepatocyte growth factor-regulated tyrosine kinase|
           substrate
          Length = 760

 Score = 33.1 bits (74), Expect = 0.38
 Identities = 18/72 (25%), Positives = 31/72 (43%), Gaps = 4/72 (5%)
 Frame = -3

Query: 468 PHLP--AAPSGVGPHEPQQ--AQNHGELERAEPDHLAGQLPQQEQYEHHERGPERRRVAV 301
           P +P    P  +   +PQQ   Q   ++   +P  + GQ PQQ   +  +  P+   V +
Sbjct: 646 PQIPFQPQPQQIPGQQPQQIPGQQPQQIPGQQPQQIPGQQPQQIPVQQPQPQPQMGHVML 705

Query: 300 EEDMVPPGVAVP 265
           ++   PP    P
Sbjct: 706 QQHQAPPAAQAP 717



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>TENS_CHICK (Q04205) Tensin|
          Length = 1744

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
 Frame = +3

Query: 330 AHGAHTAPAEG-ADRQGGLA-PRAPVRHDSGLAGAHGGLRRWELQGG 464
           AH + + PA G A  +  LA P+AP R  S       GL  W+ QGG
Sbjct: 703 AHRSQSFPAVGTAKYEANLALPQAPARSTSSREAVQRGLNSWQQQGG 749



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>LEGA_PEA (P02857) Legumin A precursor [Contains: Legumin A alpha chain|
           (Legumin A acidic chain); Legumin A beta chain (Legumin
           A basic chain)]
          Length = 517

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 17/60 (28%), Positives = 26/60 (43%)
 Frame = -3

Query: 471 GPHLPAAPSGVGPHEPQQAQNHGELERAEPDHLAGQLPQQEQYEHHERGPERRRVAVEED 292
           G  + + P     H+    Q   E E  +P H  G   ++E+ E  ER P  +R   EE+
Sbjct: 252 GLSIISPPEKQARHQRGSRQEEDEDEEKQPRHQRGSRQEEEEDEDEERQPRHQRRRGEEE 311



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>IE63_HCMVA (P16749) Transcriptional regulator IE63 homolog (Protein UL69)|
          Length = 744

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 23/92 (25%), Positives = 29/92 (31%)
 Frame = -3

Query: 468 PHLPAAPSGVGPHEPQQAQNHGELERAEPDHLAGQLPQQEQYEHHERGPERRRVAVEEDM 289
           P + AAP    P +PQQ  + GELE  E    A         + H        V  +   
Sbjct: 592 PMIAAAPPAQPPSQPQQHYSEGELEEDEDSDDASSQDLVRATDRH-----GDTVVYKTTA 646

Query: 288 VPPGVAVPXXXXXXXXXXXXXXLPEAARRGQP 193
           VPP    P               P  +  G P
Sbjct: 647 VPPSPPAPLAGVRSHRGELNLMTPSPSHGGSP 678



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>ZBT17_CHICK (Q90625) Zinc finger and BTB domain-containing protein 17 (Zinc|
           finger protein 151) (Zinc finger protein Z13) (Fragment)
          Length = 706

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 26/111 (23%), Positives = 41/111 (36%), Gaps = 5/111 (4%)
 Frame = -3

Query: 456 AAPSGVGPHEPQQAQNHGELERAEPDHLAGQLPQQEQYEHHERGPERRRVAV---EEDMV 286
           A+P+ V P  PQ A++  E+  + P       P  E       G E    A+   EE+  
Sbjct: 93  ASPAAVSPSRPQPAES--EVGNSSPGEKGSDAPSTEARGMELEGKEEEGEAMVEDEEEAK 150

Query: 285 PPGVAVPXXXXXXXXXXXXXXLPEAARR--GQPRLERDGRHEDGHQHQVLA 139
            P  A P                ++ +   G+ RL R G + D  + +  A
Sbjct: 151 IPKAAQPKSESKENAEDNESGSTDSGQENSGETRLLRSGTYSDRTESKAYA 201



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>CO8A_RABIT (P98136) Complement component C8 alpha chain precursor (Complement|
           component 8 alpha subunit)
          Length = 585

 Score = 29.6 bits (65), Expect = 4.2
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +2

Query: 413 WACWGSWGPTPLGAAGR 463
           W+CWGSW P   G   R
Sbjct: 543 WSCWGSWSPCTAGTRER 559



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>LEGA2_PEA (P15838) Legumin A2 precursor [Contains: Legumin A2 alpha chain|
           (Legumin A2 acidic chain); Legumin A2 beta chain
           (Legumin A2 basic chain)]
          Length = 520

 Score = 29.6 bits (65), Expect = 4.2
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = -3

Query: 423 QQAQNHGELERAEPDHLAGQLPQQEQYEHHERGPERRRVAVEED 292
           +Q ++  E E  +P H  G   ++E+ E  ER P  +R   EE+
Sbjct: 271 RQEEDEDEDEERQPRHQRGSRQEEEEDEDEERQPRHQRRRGEEE 314



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>JLP1_YEAST (Q12358) Alpha-ketoglutarate-dependent sulfonate dioxygenase (EC|
           1.14.11.-)
          Length = 412

 Score = 29.6 bits (65), Expect = 4.2
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = +3

Query: 354 AEGADRQGGLAPRAPVRHDSGLAGAHGGLRR 446
           AE + RQGG+  RAPV H   L   H  L++
Sbjct: 278 AENSQRQGGIKRRAPVTHIHPLVRVHPVLKK 308



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>PTMS_RAT (P04550) Parathymosin (Zinc-binding 11.5 kDa protein)|
          Length = 101

 Score = 29.6 bits (65), Expect = 4.2
 Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
 Frame = -3

Query: 429 EPQQAQNHGELERAEP--DHLAGQLPQQEQYEHHERGPERRRVAVEEDMVPP 280
           E +      E E AE   D   G    +E+ E  + GP R+R A EED   P
Sbjct: 39  EEENGAEEEEEETAEDGEDDDEGDEEDEEEEEEEDEGPVRKRTAEEEDEADP 90



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>PNOC_BOVIN (O62647) Nociceptin precursor [Contains: Neuropeptide 1; Nociceptin|
           (Orphanin FQ) (PPNOC); Neuropeptide 2]
          Length = 176

 Score = 29.3 bits (64), Expect = 5.5
 Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
 Frame = -3

Query: 417 AQNHGELERAEPDHLAGQL--PQQEQYEHHERGPERRRVAVEEDMVPPGV 274
           A+   +L  A+PDH+A  L  P+  + +H +R P  R +   +    PG+
Sbjct: 66  ARGSWQLSPADPDHVAAALDQPRASEMQHLKRMPRVRSLFQRQKRTEPGL 115



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>CCG8_NEUCR (Q01306) Clock-controlled protein 8|
          Length = 661

 Score = 29.3 bits (64), Expect = 5.5
 Identities = 15/56 (26%), Positives = 26/56 (46%)
 Frame = -3

Query: 432 HEPQQAQNHGELERAEPDHLAGQLPQQEQYEHHERGPERRRVAVEEDMVPPGVAVP 265
           HE QQ Q + +  +    + A Q  QQ Q+ HH++  ++  V V +       + P
Sbjct: 18  HEHQQHQQYQQPPQHHQHYEAPQHQQQHQHHHHQQQQQQHPVPVPKQEQADNTSAP 73



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>VID21_USTMA (Q4P209) Chromatin modification-related protein VID21|
          Length = 1654

 Score = 29.3 bits (64), Expect = 5.5
 Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
 Frame = -3

Query: 459  PAAPSGVGPHEPQQAQNHGELER---AEPDHLAGQLPQQEQYEHHERGPERRRVAVEEDM 289
            PAA +     + QQ Q   +L+    A+  +L  Q+ QQ+Q +  ++  +  + A     
Sbjct: 1306 PAAAAAAQQQQQQQVQLQSQLQASQAAQMQNLYAQMQQQQQQQQRQQQQQLGQAAAGLAQ 1365

Query: 288  VPPGV 274
            V PGV
Sbjct: 1366 VRPGV 1370



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>SYFB_BIFLO (Q8G5E8) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)|
           (Phenylalanine--tRNA ligase beta chain) (PheRS)
          Length = 869

 Score = 29.3 bits (64), Expect = 5.5
 Identities = 16/36 (44%), Positives = 20/36 (55%)
 Frame = -3

Query: 468 PHLPAAPSGVGPHEPQQAQNHGELERAEPDHLAGQL 361
           P +PA P GV P + Q A     L   +PDH+AG L
Sbjct: 632 PAIPALPGGVRPTDEQLAALDAGLPE-QPDHVAGIL 666



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>AORSN_ASPOR (Q8NK92) Aorsin precursor (EC 3.4.21.-)|
          Length = 652

 Score = 28.9 bits (63), Expect = 7.2
 Identities = 17/57 (29%), Positives = 23/57 (40%)
 Frame = -3

Query: 444 GVGPHEPQQAQNHGELERAEPDHLAGQLPQQEQYEHHERGPERRRVAVEEDMVPPGV 274
           G+      Q QNHG L           L     YE+H R   ++ +A E+  VP  V
Sbjct: 110 GINASRVAQTQNHGWLVFHATSKEIENLFDTTYYEYHNRKTGKKAIACEQYHVPASV 166



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>SN1L1_HUMAN (P57059) Serine/threonine-protein kinase SNF1-like kinase 1 (EC|
           2.7.11.1) (Serine/threonine-protein kinase SNF1LK)
          Length = 783

 Score = 28.9 bits (63), Expect = 7.2
 Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
 Frame = +3

Query: 318 VRGLAHGAHTAPAEGADRQGGLAP-RAPVRHDSGLAGAHGGLRRWEL 455
           ++GLA     APA  A R GGL+P  AP +      GA G    W L
Sbjct: 605 IKGLARQVCQAPASRASR-GGLSPFHAPAQSPGLHGGAAGSREGWSL 650



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>FOXJ3_HUMAN (Q9UPW0) Forkhead box protein J3|
          Length = 622

 Score = 28.9 bits (63), Expect = 7.2
 Identities = 16/69 (23%), Positives = 24/69 (34%), Gaps = 6/69 (8%)
 Frame = -3

Query: 468 PHLPAAPSGV------GPHEPQQAQNHGELERAEPDHLAGQLPQQEQYEHHERGPERRRV 307
           PH P  P G+       PH     Q H +L+   P H          ++H +  P  +  
Sbjct: 381 PHPPHRPHGLPQHPQRSPHPAPHPQQHSQLQSPHPQH-------PSPHQHIQHHPNHQHQ 433

Query: 306 AVEEDMVPP 280
            +     PP
Sbjct: 434 TLTHQAPPP 442



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>CO7_PIG (Q9TUQ3) Complement component C7 precursor|
          Length = 843

 Score = 28.9 bits (63), Expect = 7.2
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +2

Query: 413 WACWGSWGPTPLGAAGR 463
           W+CW SWGP   G   R
Sbjct: 503 WSCWSSWGPCAQGKKTR 519



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>SRF_DROME (Q24535) Serum response factor homolog (dSRF) (Protein blistered)|
          Length = 449

 Score = 28.9 bits (63), Expect = 7.2
 Identities = 16/56 (28%), Positives = 24/56 (42%)
 Frame = -3

Query: 459 PAAPSGVGPHEPQQAQNHGELERAEPDHLAGQLPQQEQYEHHERGPERRRVAVEED 292
           P AP     H PQ A    + ++ +      Q  QQ+Q+   +RG +R      ED
Sbjct: 65  PPAPQCQTLHSPQHASQQQQQQQQQQQQHQQQQQQQQQHPQQQRGLKRSGSDCYED 120



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>CELR3_MOUSE (Q91ZI0) Cadherin EGF LAG seven-pass G-type receptor 3 precursor|
          Length = 3301

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = -3

Query: 471  GPHLPAAPSGVGPHEPQQAQNHGELERAEPDHLAGQLPQQE 349
            GPH  A  S +GP  P+ A +H  +    PD    ++P+ E
Sbjct: 3262 GPHTTATASALGPSTPRSATSH-SISELSPD---SEVPRSE 3298



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>RPTN_HUMAN (Q6XPR3) Repetin|
          Length = 784

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = -3

Query: 435 PHEPQQAQNHGELERAEPDHLAGQLPQQEQYEHHERGPERR 313
           P       +HG+ ER + D   GQ  +Q++  HH + PER+
Sbjct: 137 PERQDGDSHHGQPERQDRDSHHGQSEKQDRDSHHSQ-PERQ 176



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>RPOA_PSEHT (Q3IJI6) DNA-directed RNA polymerase alpha chain (EC 2.7.7.6) (RNAP|
           alpha subunit) (Transcriptase alpha chain) (RNA
           polymerase alpha subunit)
          Length = 328

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -3

Query: 462 LPAAPSGVGPHEPQQAQNHGELERAEPDHL 373
           L  A SGVGP      Q+ G++  A PDH+
Sbjct: 100 LTLAKSGVGPVTASDIQHDGDVTIANPDHV 129



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>IF2_TREPA (O83861) Translation initiation factor IF-2|
          Length = 842

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 16/49 (32%), Positives = 19/49 (38%)
 Frame = -3

Query: 474 RGPHLPAAPSGVGPHEPQQAQNHGELERAEPDHLAGQLPQQEQYEHHER 328
           RGP  PA   G GP  P   Q              G+  Q  QY+H +R
Sbjct: 177 RGPARPAGRVGSGPRGPAPLQVGAGKPAQNKRSFRGRKQQTYQYQHKDR 225


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,339,221
Number of Sequences: 219361
Number of extensions: 961256
Number of successful extensions: 3925
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 3680
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3908
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3188886965
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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