ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl12f10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 212 8e-52
2dbj|AP005413.2| Oryza sativa (japonica cultivar-group) genomic D... 212 8e-52
3dbj|AK100158.1| Oryza sativa (japonica cultivar-group) cDNA clon... 212 8e-52
4dbj|AK073114.1| Oryza sativa (japonica cultivar-group) cDNA clon... 212 8e-52
5dbj|AK071459.1| Oryza sativa (japonica cultivar-group) cDNA clon... 212 8e-52
6dbj|AP005930.3| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
7dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 54 4e-04
8dbj|AP005761.2| Oryza sativa (japonica cultivar-group) genomic D... 54 4e-04
9dbj|AK110449.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 4e-04
10gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 54 4e-04
11emb|AL928783.4|CNS08CCD Oryza sativa chromosome 12, . BAC OSJNBa... 54 4e-04
12gb|AC123526.2| Oryza sativa japonica cultivar-group chromosome 1... 50 0.007
13dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.007
14dbj|AK120954.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.007
15gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 50 0.007
16gb|AY305378.1| Ralstonia eutropha H16 megaplasmid pHG1, complete... 48 0.026
17dbj|AP004791.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.026
18dbj|AP003522.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.026
19dbj|AK119403.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.026
20gb|AC135190.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.41
21gb|AC136998.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.41
22gb|CP000249.1| Frankia sp. CcI3, complete genome 44 0.41
23ref|XM_589347.2| PREDICTED: Bos taurus similar to CG16965-PA (LO... 42 1.6
24gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 42 1.6
25gb|AC018687.6| Homo sapiens BAC clone RP11-462G22 from 4, comple... 42 1.6
26dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
27dbj|AP006156.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
28gb|AE015451.1| Pseudomonas putida KT2440 complete genome 42 1.6
29gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 40 6.4
30gb|AC120539.4| Oryza sativa (japonica cultivar-group) chromosome... 40 6.4
31ref|XR_002637.1| PREDICTED: Mus musculus hypothetical protein LO... 40 6.4
32ref|XR_005103.1| PREDICTED: Mus musculus hypothetical protein LO... 40 6.4
33ref|XR_002269.1| PREDICTED: Mus musculus hypothetical protein LO... 40 6.4
34ref|XM_534397.2| PREDICTED: Canis familiaris similar to myosin, ... 40 6.4
35ref|XM_533672.2| PREDICTED: Canis familiaris similar to transloc... 40 6.4
36emb|BX640447.1| Bordetella bronchiseptica strain RB50, complete ... 40 6.4
37emb|BX640437.1| Bordetella bronchiseptica strain RB50, complete ... 40 6.4
38emb|BX640432.1| Bordetella parapertussis strain 12822, complete ... 40 6.4
39emb|BX640423.1| Bordetella parapertussis strain 12822, complete ... 40 6.4
40emb|BX640413.1| Bordetella pertussis strain Tohama I, complete g... 40 6.4
41emb|BX640412.1| Bordetella pertussis strain Tohama I, complete g... 40 6.4
42gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 40 6.4
43dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 6.4
44ref|XM_230774.3| PREDICTED: Rattus norvegicus myosin, heavy poly... 40 6.4
45ref|XM_310715.2| Anopheles gambiae str. PEST ENSANGP00000007487 ... 40 6.4
46emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 40 6.4
47gb|DQ323065.1| Triticum aestivum cadmium tolerance factor mRNA, ... 40 6.4
48gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 6.4
49gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 40 6.4
50emb|AL844852.11| Mouse DNA sequence from clone RP23-260N23 on ch... 40 6.4
51gb|AC141868.4| Mus musculus BAC clone RP24-418L21 from 8, comple... 40 6.4 
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  212 bits (107), Expect = 8e-52
 Identities = 298/361 (82%), Gaps = 3/361 (0%)
 Strand = Plus / Plus

                                                                            
Query: 113      ccgaggccgagctcctgtggaagctgcgcaagtacctggtgctgatggccatcctcgtgg 172
                |||||||||| ||||||||||||||| | ||||||||||||||| | |||||||| |  |
Sbjct: 10867305 ccgaggccgatctcctgtggaagctgaggaagtacctggtgctgcttgccatcctagcag 10867364

                                                                            
Query: 173      cggccatcacgttccaggcggggctggccccgccgggcggcttctggcaggacaacgacg 232
                |||||||||| ||||| || ||||| |  || || ||||||||||||||| |    ||| 
Sbjct: 10867365 cggccatcaccttccaagccgggctagggccccccggcggcttctggcagcag---gacc 10867421

                                                                            
Query: 233      agcacggccacgtcgccagcgacatcgtgatgaggtacagctaccccaggcggtaccatg 292
                |||||||| ||  |||| ||||| | ||| | |||||||||||||| ||| ||||||  |
Sbjct: 10867422 agcacggctaccacgccggcgacgtggtgctcaggtacagctacccgaggaggtacctcg 10867481

                                                                            
Query: 293      tcttcttctactgcaacacgacggcgttcggggcctcgctcatggtgctcatactgctcc 352
                ||||||||||||||||||| |||||||||||||| || ||||| || |||||||||||||
Sbjct: 10867482 tcttcttctactgcaacaccacggcgttcggggcgtccctcatcgtcctcatactgctcc 10867541

                                                                            
Query: 353      tgctgagggagctgaccggcaaggtggtctggctccgcgcgctccagttcgccatgattc 412
                |  | | |||||||| | || | |   | ||||||||  | ||||||||||||||| | |
Sbjct: 10867542 tcgtcaaggagctgagccgcgacgccatttggctccggtccctccagttcgccatggtgc 10867601

                                                                            
Query: 413      tgggcttgctggggctcatgggggcctacgccgctgggagctgcagggaggtgaggacct 472
                | |||||||| || |||||||| |||||||| || || ||||||||||||||||||||||
Sbjct: 10867602 tcggcttgctcggcctcatgggtgcctacgctgccggcagctgcagggaggtgaggacct 10867661

                 
Query: 473      c 473
                |
Sbjct: 10867662 c 10867662



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                       
Query: 294      cttcttctactgcaacacgacggcgttcggggcctcgct 332
                ||||||||||||||||||| ||||||||| ||| |||||
Sbjct: 10626798 cttcttctactgcaacacggcggcgttcgtggcgtcgct 10626760



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                      
Query: 419      tgctggggctcatgggggcctacgccgctgggagctgc 456
                |||||||||||||||| || |||||||| |||||||||
Sbjct: 10601407 tgctggggctcatgggcgcgtacgccgccgggagctgc 10601444



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                            
Query: 427      ctcatgggggcctacgccgctgggagct 454
                |||||||| |||||||||||||||||||
Sbjct: 10656760 ctcatgggtgcctacgccgctgggagct 10656733



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                            
Query: 295      ttcttctactgcaacacgacggcgttcg 322
                ||||||||||||||| ||||||||||||
Sbjct: 10195594 ttcttctactgcaacgcgacggcgttcg 10195567



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                           
Query: 436      gcctacgccgctgggagctgcagggag 462
                ||||||||||| |||||||||||||||
Sbjct: 10602549 gcctacgccgcggggagctgcagggag 10602575



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                              
Query: 129      gtggaagctgcgcaagtacctggtgctgatggccatcctcgtggcg 174
                |||| ||||||||||||||||  ||||| | |||||||| ||||||
Sbjct: 10816806 gtggcagctgcgcaagtacctcctgctgctcgccatcctggtggcg 10816851



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                      
Query: 295      ttcttctactgcaacacgacggcgttcggggcctcgct 332
                |||||| ||||||||||| ||||||||| ||| |||||
Sbjct: 10601280 ttcttccactgcaacacggcggcgttcgtggcgtcgct 10601317



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                        
Query: 283      cggtaccatgtcttcttctactgcaacacgacggcgttcg 322
                |||||||  |||||||||||||||||| | || |||||||
Sbjct: 10658544 cggtacctcgtcttcttctactgcaacgccaccgcgttcg 10658505



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                    
Query: 426      gctcatgggggcctacgccgctgggagctgcaggga 461
                |||||||| |||||||||||| || |||||| ||||
Sbjct: 10627146 gctcatggcggcctacgccgccggcagctgccggga 10627111



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 189      ggcggggctggccccgccgggcgg 212
                ||||||||||| ||||||||||||
Sbjct: 10626888 ggcggggctgggcccgccgggcgg 10626865
to top
>dbj|AP005413.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0055N24
          Length = 142702

 Score =  212 bits (107), Expect = 8e-52
 Identities = 298/361 (82%), Gaps = 3/361 (0%)
 Strand = Plus / Plus

                                                                         
Query: 113   ccgaggccgagctcctgtggaagctgcgcaagtacctggtgctgatggccatcctcgtgg 172
             |||||||||| ||||||||||||||| | ||||||||||||||| | |||||||| |  |
Sbjct: 93671 ccgaggccgatctcctgtggaagctgaggaagtacctggtgctgcttgccatcctagcag 93730

                                                                         
Query: 173   cggccatcacgttccaggcggggctggccccgccgggcggcttctggcaggacaacgacg 232
             |||||||||| ||||| || ||||| |  || || ||||||||||||||| |    ||| 
Sbjct: 93731 cggccatcaccttccaagccgggctagggccccccggcggcttctggcagcag---gacc 93787

                                                                         
Query: 233   agcacggccacgtcgccagcgacatcgtgatgaggtacagctaccccaggcggtaccatg 292
             |||||||| ||  |||| ||||| | ||| | |||||||||||||| ||| ||||||  |
Sbjct: 93788 agcacggctaccacgccggcgacgtggtgctcaggtacagctacccgaggaggtacctcg 93847

                                                                         
Query: 293   tcttcttctactgcaacacgacggcgttcggggcctcgctcatggtgctcatactgctcc 352
             ||||||||||||||||||| |||||||||||||| || ||||| || |||||||||||||
Sbjct: 93848 tcttcttctactgcaacaccacggcgttcggggcgtccctcatcgtcctcatactgctcc 93907

                                                                         
Query: 353   tgctgagggagctgaccggcaaggtggtctggctccgcgcgctccagttcgccatgattc 412
             |  | | |||||||| | || | |   | ||||||||  | ||||||||||||||| | |
Sbjct: 93908 tcgtcaaggagctgagccgcgacgccatttggctccggtccctccagttcgccatggtgc 93967

                                                                         
Query: 413   tgggcttgctggggctcatgggggcctacgccgctgggagctgcagggaggtgaggacct 472
             | |||||||| || |||||||| |||||||| || || ||||||||||||||||||||||
Sbjct: 93968 tcggcttgctcggcctcatgggtgcctacgctgccggcagctgcagggaggtgaggacct 94027

              
Query: 473   c 473
             |
Sbjct: 94028 c 94028



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                           
Query: 129   gtggaagctgcgcaagtacctggtgctgatggccatcctcgtggcg 174
             |||| ||||||||||||||||  ||||| | |||||||| ||||||
Sbjct: 43172 gtggcagctgcgcaagtacctcctgctgctcgccatcctggtggcg 43217
to top
>dbj|AK100158.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019J01, full
           insert sequence
          Length = 3208

 Score =  212 bits (107), Expect = 8e-52
 Identities = 298/361 (82%), Gaps = 3/361 (0%)
 Strand = Plus / Plus

                                                                       
Query: 113 ccgaggccgagctcctgtggaagctgcgcaagtacctggtgctgatggccatcctcgtgg 172
           |||||||||| ||||||||||||||| | ||||||||||||||| | |||||||| |  |
Sbjct: 241 ccgaggccgatctcctgtggaagctgaggaagtacctggtgctgcttgccatcctagcag 300

                                                                       
Query: 173 cggccatcacgttccaggcggggctggccccgccgggcggcttctggcaggacaacgacg 232
           |||||||||| ||||| || ||||| |  || || ||||||||||||||| |    ||| 
Sbjct: 301 cggccatcaccttccaagccgggctagggccccccggcggcttctggcagcag---gacc 357

                                                                       
Query: 233 agcacggccacgtcgccagcgacatcgtgatgaggtacagctaccccaggcggtaccatg 292
           |||||||| ||  |||| ||||| | ||| | |||||||||||||| ||| ||||||  |
Sbjct: 358 agcacggctaccacgccggcgacgtggtgctcaggtacagctacccgaggaggtacctcg 417

                                                                       
Query: 293 tcttcttctactgcaacacgacggcgttcggggcctcgctcatggtgctcatactgctcc 352
           ||||||||||||||||||| |||||||||||||| || ||||| || |||||||||||||
Sbjct: 418 tcttcttctactgcaacaccacggcgttcggggcgtccctcatcgtcctcatactgctcc 477

                                                                       
Query: 353 tgctgagggagctgaccggcaaggtggtctggctccgcgcgctccagttcgccatgattc 412
           |  | | |||||||| | || | |   | ||||||||  | ||||||||||||||| | |
Sbjct: 478 tcgtcaaggagctgagccgcgacgccatttggctccggtccctccagttcgccatggtgc 537

                                                                       
Query: 413 tgggcttgctggggctcatgggggcctacgccgctgggagctgcagggaggtgaggacct 472
           | |||||||| || |||||||| |||||||| || || ||||||||||||||||||||||
Sbjct: 538 tcggcttgctcggcctcatgggtgcctacgctgccggcagctgcagggaggtgaggacct 597

            
Query: 473 c 473
           |
Sbjct: 598 c 598
to top
>dbj|AK073114.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033020F13, full
           insert sequence
          Length = 3190

 Score =  212 bits (107), Expect = 8e-52
 Identities = 298/361 (82%), Gaps = 3/361 (0%)
 Strand = Plus / Plus

                                                                       
Query: 113 ccgaggccgagctcctgtggaagctgcgcaagtacctggtgctgatggccatcctcgtgg 172
           |||||||||| ||||||||||||||| | ||||||||||||||| | |||||||| |  |
Sbjct: 241 ccgaggccgatctcctgtggaagctgaggaagtacctggtgctgcttgccatcctagcag 300

                                                                       
Query: 173 cggccatcacgttccaggcggggctggccccgccgggcggcttctggcaggacaacgacg 232
           |||||||||| ||||| || ||||| |  || || ||||||||||||||| |    ||| 
Sbjct: 301 cggccatcaccttccaagccgggctagggccccccggcggcttctggcagcag---gacc 357

                                                                       
Query: 233 agcacggccacgtcgccagcgacatcgtgatgaggtacagctaccccaggcggtaccatg 292
           |||||||| ||  |||| ||||| | ||| | |||||||||||||| ||| ||||||  |
Sbjct: 358 agcacggctaccacgccggcgacgtggtgctcaggtacagctacccgaggaggtacctcg 417

                                                                       
Query: 293 tcttcttctactgcaacacgacggcgttcggggcctcgctcatggtgctcatactgctcc 352
           ||||||||||||||||||| |||||||||||||| || ||||| || |||||||||||||
Sbjct: 418 tcttcttctactgcaacaccacggcgttcggggcgtccctcatcgtcctcatactgctcc 477

                                                                       
Query: 353 tgctgagggagctgaccggcaaggtggtctggctccgcgcgctccagttcgccatgattc 412
           |  | | |||||||| | || | |   | ||||||||  | ||||||||||||||| | |
Sbjct: 478 tcgtcaaggagctgagccgcgacgccatttggctccggtccctccagttcgccatggtgc 537

                                                                       
Query: 413 tgggcttgctggggctcatgggggcctacgccgctgggagctgcagggaggtgaggacct 472
           | |||||||| || |||||||| |||||||| || || ||||||||||||||||||||||
Sbjct: 538 tcggcttgctcggcctcatgggtgcctacgctgccggcagctgcagggaggtgaggacct 597

            
Query: 473 c 473
           |
Sbjct: 598 c 598
to top
>dbj|AK071459.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023089M14, full
           insert sequence
          Length = 3577

 Score =  212 bits (107), Expect = 8e-52
 Identities = 298/361 (82%), Gaps = 3/361 (0%)
 Strand = Plus / Plus

                                                                       
Query: 113 ccgaggccgagctcctgtggaagctgcgcaagtacctggtgctgatggccatcctcgtgg 172
           |||||||||| ||||||||||||||| | ||||||||||||||| | |||||||| |  |
Sbjct: 241 ccgaggccgatctcctgtggaagctgaggaagtacctggtgctgcttgccatcctagcag 300

                                                                       
Query: 173 cggccatcacgttccaggcggggctggccccgccgggcggcttctggcaggacaacgacg 232
           |||||||||| ||||| || ||||| |  || || ||||||||||||||| |    ||| 
Sbjct: 301 cggccatcaccttccaagccgggctagggccccccggcggcttctggcagcag---gacc 357

                                                                       
Query: 233 agcacggccacgtcgccagcgacatcgtgatgaggtacagctaccccaggcggtaccatg 292
           |||||||| ||  |||| ||||| | ||| | |||||||||||||| ||| ||||||  |
Sbjct: 358 agcacggctaccacgccggcgacgtggtgctcaggtacagctacccgaggaggtacctcg 417

                                                                       
Query: 293 tcttcttctactgcaacacgacggcgttcggggcctcgctcatggtgctcatactgctcc 352
           ||||||||||||||||||| |||||||||||||| || ||||| || |||||||||||||
Sbjct: 418 tcttcttctactgcaacaccacggcgttcggggcgtccctcatcgtcctcatactgctcc 477

                                                                       
Query: 353 tgctgagggagctgaccggcaaggtggtctggctccgcgcgctccagttcgccatgattc 412
           |  | | |||||||| | || | |   | ||||||||  | ||||||||||||||| | |
Sbjct: 478 tcgtcaaggagctgagccgcgacgccatttggctccggtccctccagttcgccatggtgc 537

                                                                       
Query: 413 tgggcttgctggggctcatgggggcctacgccgctgggagctgcagggaggtgaggacct 472
           | |||||||| || |||||||| |||||||| || || ||||||||||||||||||||||
Sbjct: 538 tcggcttgctcggcctcatgggtgcctacgctgccggcagctgcagggaggtgaggacct 597

            
Query: 473 c 473
           |
Sbjct: 598 c 598
to top
>dbj|AP005930.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0502B12
          Length = 197160

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                             
Query: 181   acgttccaggcggggctggccccgccgggcggcttctggcaggacaac 228
             |||| |||||||||||||  ||||||||| || |||||||||||||||
Sbjct: 37144 acgtaccaggcggggctgaacccgccgggagggttctggcaggacaac 37097



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 295  ttcttctactgcaacacgacggcgttcg 322
            ||||||||||||||| ||||||||||||
Sbjct: 7705 ttcttctactgcaacgcgacggcgttcg 7678



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 208    ggcggcttctggcaggacaacgacg 232
              ||||||||||||||| |||||||||
Sbjct: 103140 ggcggcttctggcagcacaacgacg 103116



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                     
Query: 186   ccaggcggggctggccccgccgggcggcttctggcaggac 225
             |||||| ||||||  ||||||||| || ||||||||||||
Sbjct: 21983 ccaggccgggctgaacccgccgggggggttctggcaggac 21944
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                          
Query: 424     gggctcatgggggcctacgccgctgggagctgcagggaggtga 466
               |||||||||||||||| |||||| || ||||||||| ||||||
Sbjct: 1987283 gggctcatgggggccttcgccgccggcagctgcaggaaggtga 1987325



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 68/82 (82%)
 Strand = Plus / Plus

                                                                           
Query: 382     tggctccgcgcgctccagttcgccatgattctgggcttgctggggctcatgggggcctac 441
               ||||| ||||||||||||  ||| ||||| || | | || | || |||||||||||||||
Sbjct: 1985684 tggctgcgcgcgctccaggccgcgatgatactcgacatgttcggcctcatgggggcctac 1985743

                                     
Query: 442     gccgctgggagctgcagggagg 463
               ||||| || ||| |||||||||
Sbjct: 1985744 gccgccggcagcagcagggagg 1985765



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 58/69 (84%)
 Strand = Plus / Plus

                                                                           
Query: 391     gcgctccagttcgccatgattctgggcttgctggggctcatgggggcctacgccgctggg 450
               ||||| ||| ||||||||||||||  |||| | || || || || || ||||||||||||
Sbjct: 1986707 gcgctgcaggtcgccatgattctgaacttgtttggcctgatcggagcttacgccgctggg 1986766

                        
Query: 451     agctgcagg 459
               |||||||||
Sbjct: 1986767 agctgcagg 1986775



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                        
Query: 189     ggcggggctggccccgccgggcggcttctggcaggacaacg 229
               ||||||||||| |||||||||||| ||||||  ||||||||
Sbjct: 1985494 ggcggggctggacccgccgggcgggttctggacggacaacg 1985534



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                             
Query: 292     gtcttcttctactgcaacacgacggcgttc 321
               |||||||||||||||||| ||||| |||||
Sbjct: 1987691 gtcttcttctactgcaacgcgacgtcgttc 1987720
to top
>dbj|AP005761.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:B1066D09
          Length = 183999

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                     
Query: 294    cttcttctactgcaacacgacggcgttcggggcctcgct 332
              ||||||||||||||||||| ||||||||| ||| |||||
Sbjct: 163505 cttcttctactgcaacacggcggcgttcgtggcgtcgct 163467



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                    
Query: 419    tgctggggctcatgggggcctacgccgctgggagctgc 456
              |||||||||||||||| || |||||||| |||||||||
Sbjct: 138114 tgctggggctcatgggcgcgtacgccgccgggagctgc 138151



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 436    gcctacgccgctgggagctgcagggag 462
              ||||||||||| |||||||||||||||
Sbjct: 139256 gcctacgccgcggggagctgcagggag 139282



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                    
Query: 295    ttcttctactgcaacacgacggcgttcggggcctcgct 332
              |||||| ||||||||||| ||||||||| ||| |||||
Sbjct: 137987 ttcttccactgcaacacggcggcgttcgtggcgtcgct 138024



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                  
Query: 426    gctcatgggggcctacgccgctgggagctgcaggga 461
              |||||||| |||||||||||| || |||||| ||||
Sbjct: 163853 gctcatggcggcctacgccgccggcagctgccggga 163818



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 189    ggcggggctggccccgccgggcgg 212
              ||||||||||| ||||||||||||
Sbjct: 163595 ggcggggctgggcccgccgggcgg 163572
to top
>dbj|AK110449.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-166-E04, full
           insert sequence
          Length = 2836

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 294 cttcttctactgcaacacgacggcgttcggggcctcgct 332
           ||||||||||||||||||| ||||||||| ||| |||||
Sbjct: 793 cttcttctactgcaacacggcggcgttcgtggcgtcgct 831



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 189 ggcggggctggccccgccgggcgg 212
           ||||||||||| ||||||||||||
Sbjct: 703 ggcggggctgggcccgccgggcgg 726



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 426 gctcatgggggcctacgccgctgggagctgcaggga 461
           |||||||| |||||||||||| || |||||| ||||
Sbjct: 445 gctcatggcggcctacgccgccggcagctgccggga 480
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                          
Query: 424     gggctcatgggggcctacgccgctgggagctgcagggaggtga 466
               |||||||||||||||| |||||| || ||||||||| ||||||
Sbjct: 1987234 gggctcatgggggccttcgccgccggcagctgcaggaaggtga 1987276



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 68/82 (82%)
 Strand = Plus / Plus

                                                                           
Query: 382     tggctccgcgcgctccagttcgccatgattctgggcttgctggggctcatgggggcctac 441
               ||||| ||||||||||||  ||| ||||| || | | || | || |||||||||||||||
Sbjct: 1985635 tggctgcgcgcgctccaggccgcgatgatactcgacatgttcggcctcatgggggcctac 1985694

                                     
Query: 442     gccgctgggagctgcagggagg 463
               ||||| || ||| |||||||||
Sbjct: 1985695 gccgccggcagcagcagggagg 1985716



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 58/69 (84%)
 Strand = Plus / Plus

                                                                           
Query: 391     gcgctccagttcgccatgattctgggcttgctggggctcatgggggcctacgccgctggg 450
               ||||| ||| ||||||||||||||  |||| | || || || || || ||||||||||||
Sbjct: 1986658 gcgctgcaggtcgccatgattctgaacttgtttggcctgatcggagcttacgccgctggg 1986717

                        
Query: 451     agctgcagg 459
               |||||||||
Sbjct: 1986718 agctgcagg 1986726



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                        
Query: 189     ggcggggctggccccgccgggcggcttctggcaggacaacg 229
               ||||||||||| |||||||||||| ||||||  ||||||||
Sbjct: 1985445 ggcggggctggacccgccgggcgggttctggacggacaacg 1985485



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                             
Query: 292     gtcttcttctactgcaacacgacggcgttc 321
               |||||||||||||||||| ||||| |||||
Sbjct: 1987642 gtcttcttctactgcaacgcgacgtcgttc 1987671
to top
>emb|AL928783.4|CNS08CCD Oryza sativa chromosome 12, . BAC OSJNBa0028B04 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 158885

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                        
Query: 424   gggctcatgggggcctacgccgctgggagctgcagggaggtga 466
             |||||||||||||||| |||||| || ||||||||| ||||||
Sbjct: 18176 gggctcatgggggccttcgccgccggcagctgcaggaaggtga 18218



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 68/82 (82%)
 Strand = Plus / Plus

                                                                         
Query: 382   tggctccgcgcgctccagttcgccatgattctgggcttgctggggctcatgggggcctac 441
             ||||| ||||||||||||  ||| ||||| || | | || | || |||||||||||||||
Sbjct: 16577 tggctgcgcgcgctccaggccgcgatgatactcgacatgttcggcctcatgggggcctac 16636

                                   
Query: 442   gccgctgggagctgcagggagg 463
             ||||| || ||| |||||||||
Sbjct: 16637 gccgccggcagcagcagggagg 16658



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 58/69 (84%)
 Strand = Plus / Plus

                                                                         
Query: 391   gcgctccagttcgccatgattctgggcttgctggggctcatgggggcctacgccgctggg 450
             ||||| ||| ||||||||||||||  |||| | || || || || || ||||||||||||
Sbjct: 17600 gcgctgcaggtcgccatgattctgaacttgtttggcctgatcggagcttacgccgctggg 17659

                      
Query: 451   agctgcagg 459
             |||||||||
Sbjct: 17660 agctgcagg 17668



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                      
Query: 189   ggcggggctggccccgccgggcggcttctggcaggacaacg 229
             ||||||||||| |||||||||||| ||||||  ||||||||
Sbjct: 16387 ggcggggctggacccgccgggcgggttctggacggacaacg 16427



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 292   gtcttcttctactgcaacacgacggcgttc 321
             |||||||||||||||||| ||||| |||||
Sbjct: 18584 gtcttcttctactgcaacgcgacgtcgttc 18613
to top
>gb|AC123526.2| Oryza sativa japonica cultivar-group chromosome 11 clone OSJNBa0059J06,
              complete sequence
          Length = 185449

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                   
Query: 427    ctcatgggggcctacgccgctgggagctgcagggagg 463
              |||||||||||||||||||| || ||| |||||||||
Sbjct: 111039 ctcatgggggcctacgccgccggcagcagcagggagg 111075



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                       
Query: 189    ggcggggctggccccgccgggcggcttctggcaggacaacg 229
              ||||||||||| |||||||||||| ||||||  ||||||||
Sbjct: 110804 ggcggggctggacccgccgggcgggttctggacggacaacg 110844



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                          
Query: 295    ttcttctactgcaacacgacggcgttcg 322
              ||||||| ||||||||||||||||||||
Sbjct: 112461 ttcttcttctgcaacacgacggcgttcg 112488



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                         
Query: 424    gggctcatgggggcctacgccgctgggagctgcagggaggtga 466
              ||||||||||| |||| |||||| || ||||||||| ||||||
Sbjct: 112590 gggctcatgggcgccttcgccgccggcagctgcaggaaggtga 112632



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 57/69 (82%)
 Strand = Plus / Plus

                                                                          
Query: 391    gcgctccagttcgccatgattctgggcttgctggggctcatgggggcctacgccgctggg 450
              ||||| ||| ||||||||||||||  |||| | || || || || || ||||||||||| 
Sbjct: 112014 gcgctgcaggtcgccatgattctgaacttgtttggcctgatcggagcttacgccgctggc 112073

                       
Query: 451    agctgcagg 459
              |||||||||
Sbjct: 112074 agctgcagg 112082



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 294    cttcttctactgcaacacgacggcgttc 321
              |||||||||||||||| ||||| |||||
Sbjct: 112988 cttcttctactgcaacgcgacgtcgttc 113015
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                    
Query: 427     ctcatgggggcctacgccgctgggagctgcagggagg 463
               |||||||||||||||||||| || ||| |||||||||
Sbjct: 2039484 ctcatgggggcctacgccgccggcagcagcagggagg 2039520



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                        
Query: 189     ggcggggctggccccgccgggcggcttctggcaggacaacg 229
               ||||||||||| |||||||||||| ||||||  ||||||||
Sbjct: 2039249 ggcggggctggacccgccgggcgggttctggacggacaacg 2039289



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                           
Query: 295     ttcttctactgcaacacgacggcgttcg 322
               ||||||| ||||||||||||||||||||
Sbjct: 2040906 ttcttcttctgcaacacgacggcgttcg 2040933



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                          
Query: 424     gggctcatgggggcctacgccgctgggagctgcagggaggtga 466
               ||||||||||| |||| |||||| || ||||||||| ||||||
Sbjct: 2041035 gggctcatgggcgccttcgccgccggcagctgcaggaaggtga 2041077



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 436      gcctacgccgctgggagctgcaggga 461
                ||||||||||| ||||||||||||||
Sbjct: 26713665 gcctacgccgccgggagctgcaggga 26713640



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                 
Query: 142      aagtacctggtgctgatggccatcctcgtggcg 174
                ||||||||||||||| |||||| ||| ||||||
Sbjct: 26714403 aagtacctggtgctgctggccaccctggtggcg 26714371



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 57/69 (82%)
 Strand = Plus / Plus

                                                                           
Query: 391     gcgctccagttcgccatgattctgggcttgctggggctcatgggggcctacgccgctggg 450
               ||||| ||| ||||||||||||||  |||| | || || || || || ||||||||||| 
Sbjct: 2040459 gcgctgcaggtcgccatgattctgaacttgtttggcctgatcggagcttacgccgctggc 2040518

                        
Query: 451     agctgcagg 459
               |||||||||
Sbjct: 2040519 agctgcagg 2040527



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 106     agcgccgccgaggccgagct 125
               ||||||||||||||||||||
Sbjct: 3804890 agcgccgccgaggccgagct 3804871



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 294     cttcttctactgcaacacgacggcgttc 321
               |||||||||||||||| ||||| |||||
Sbjct: 2041433 cttcttctactgcaacgcgacgtcgttc 2041460
to top
>dbj|AK120954.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023039E10, full
           insert sequence
          Length = 2917

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                
Query: 427 ctcatgggggcctacgccgctgggagctgcagggagg 463
           |||||||||||||||||||| || ||| |||||||||
Sbjct: 443 ctcatgggggcctacgccgccggcagcagcagggagg 479



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                    
Query: 189 ggcggggctggccccgccgggcggcttctggcaggacaacg 229
           ||||||||||| |||||||||||| ||||||  ||||||||
Sbjct: 208 ggcggggctggacccgccgggcgggttctggacggacaacg 248



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                        
Query: 295  ttcttctactgcaacacgacggcgttcg 322
            ||||||| ||||||||||||||||||||
Sbjct: 1865 ttcttcttctgcaacacgacggcgttcg 1892



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 57/69 (82%)
 Strand = Plus / Plus

                                                                        
Query: 391  gcgctccagttcgccatgattctgggcttgctggggctcatgggggcctacgccgctggg 450
            ||||| ||| ||||||||||||||  |||| | || || || || || ||||||||||| 
Sbjct: 1418 gcgctgcaggtcgccatgattctgaacttgtttggcctgatcggagcttacgccgctggc 1477

                     
Query: 451  agctgcagg 459
            |||||||||
Sbjct: 1478 agctgcagg 1486



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 294  cttcttctactgcaacacgacggcgttc 321
            |||||||||||||||| ||||| |||||
Sbjct: 2392 cttcttctactgcaacgcgacgtcgttc 2419
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                    
Query: 427     ctcatgggggcctacgccgctgggagctgcagggagg 463
               |||||||||||||||||||| || ||| |||||||||
Sbjct: 2047265 ctcatgggggcctacgccgccggcagcagcagggagg 2047301



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                        
Query: 189     ggcggggctggccccgccgggcggcttctggcaggacaacg 229
               ||||||||||| |||||||||||| ||||||  ||||||||
Sbjct: 2047030 ggcggggctggacccgccgggcgggttctggacggacaacg 2047070



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                           
Query: 295     ttcttctactgcaacacgacggcgttcg 322
               ||||||| ||||||||||||||||||||
Sbjct: 2048687 ttcttcttctgcaacacgacggcgttcg 2048714



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                          
Query: 424     gggctcatgggggcctacgccgctgggagctgcagggaggtga 466
               ||||||||||| |||| |||||| || ||||||||| ||||||
Sbjct: 2048816 gggctcatgggcgccttcgccgccggcagctgcaggaaggtga 2048858



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 436      gcctacgccgctgggagctgcaggga 461
                ||||||||||| ||||||||||||||
Sbjct: 27038728 gcctacgccgccgggagctgcaggga 27038703



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                 
Query: 142      aagtacctggtgctgatggccatcctcgtggcg 174
                ||||||||||||||| |||||| ||| ||||||
Sbjct: 27039466 aagtacctggtgctgctggccaccctggtggcg 27039434



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 57/69 (82%)
 Strand = Plus / Plus

                                                                           
Query: 391     gcgctccagttcgccatgattctgggcttgctggggctcatgggggcctacgccgctggg 450
               ||||| ||| ||||||||||||||  |||| | || || || || || ||||||||||| 
Sbjct: 2048240 gcgctgcaggtcgccatgattctgaacttgtttggcctgatcggagcttacgccgctggc 2048299

                        
Query: 451     agctgcagg 459
               |||||||||
Sbjct: 2048300 agctgcagg 2048308



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 106     agcgccgccgaggccgagct 125
               ||||||||||||||||||||
Sbjct: 3813584 agcgccgccgaggccgagct 3813565



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 294     cttcttctactgcaacacgacggcgttc 321
               |||||||||||||||| ||||| |||||
Sbjct: 2049214 cttcttctactgcaacgcgacgtcgttc 2049241
to top
>gb|AY305378.1| Ralstonia eutropha H16 megaplasmid pHG1, complete sequence
          Length = 452156

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 101    cggccagcgccgccgaggccgagc 124
              ||||||||||||||||||||||||
Sbjct: 222400 cggccagcgccgccgaggccgagc 222377



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 101   cggccagcgccgccgaggccgagc 124
             ||||||||||||||||||||||||
Sbjct: 99412 cggccagcgccgccgaggccgagc 99435
to top
>dbj|AP004791.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0491D10
          Length = 162039

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                          
Query: 295    ttcttctactgcaacacgacggcgttcg 322
              ||||||||||||||| ||||||||||||
Sbjct: 161960 ttcttctactgcaacgcgacggcgttcg 161933
to top
>dbj|AP003522.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
            clone:P0036B02
          Length = 168253

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 427  ctcatgggggcctacgccgctgggagct 454
            |||||||| |||||||||||||||||||
Sbjct: 9823 ctcatgggtgcctacgccgctgggagct 9796



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                     
Query: 283   cggtaccatgtcttcttctactgcaacacgacggcgttcg 322
             |||||||  |||||||||||||||||| | || |||||||
Sbjct: 11607 cggtacctcgtcttcttctactgcaacgccaccgcgttcg 11568
to top
>dbj|AK119403.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-132-E08, full
            insert sequence
          Length = 2896

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                        
Query: 427  ctcatgggggcctacgccgctgggagct 454
            |||||||| |||||||||||||||||||
Sbjct: 1910 ctcatgggtgcctacgccgctgggagct 1937



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 283 cggtaccatgtcttcttctactgcaacacgacggcgttcg 322
           |||||||  |||||||||||||||||| | || |||||||
Sbjct: 326 cggtacctcgtcttcttctactgcaacgccaccgcgttcg 365
to top
>gb|AC135190.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0064H09, complete sequence
          Length = 146742

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 436   gcctacgccgctgggagctgcaggga 461
             ||||||||||| ||||||||||||||
Sbjct: 16123 gcctacgccgccgggagctgcaggga 16098



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 142   aagtacctggtgctgatggccatcctcgtggcg 174
             ||||||||||||||| |||||| ||| ||||||
Sbjct: 16861 aagtacctggtgctgctggccaccctggtggcg 16829
to top
>gb|AC136998.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
              OSJNBa0082P17, complete sequence
          Length = 157539

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 436    gcctacgccgctgggagctgcaggga 461
              ||||||||||| ||||||||||||||
Sbjct: 123741 gcctacgccgccgggagctgcaggga 123716



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                               
Query: 142    aagtacctggtgctgatggccatcctcgtggcg 174
              ||||||||||||||| |||||| ||| ||||||
Sbjct: 124479 aagtacctggtgctgctggccaccctggtggcg 124447
to top
>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 189     ggcggggctggccccgccgggc 210
               ||||||||||||||||||||||
Sbjct: 2452264 ggcggggctggccccgccgggc 2452243
to top
>ref|XM_589347.2| PREDICTED: Bos taurus similar to CG16965-PA (LOC511919), mRNA
          Length = 2028

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 59  gcagtggccctgcagctgcaggcaa 83
           |||| ||||||||||||||||||||
Sbjct: 877 gcagaggccctgcagctgcaggcaa 901
to top
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 100    ccggccagcgccgccgaggccgagc 124
              |||||| ||||||||||||||||||
Sbjct: 996191 ccggccggcgccgccgaggccgagc 996167
to top
>gb|AC018687.6| Homo sapiens BAC clone RP11-462G22 from 4, complete sequence
          Length = 156378

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 60    cagtggccctgcagctgcagg 80
             |||||||||||||||||||||
Sbjct: 54013 cagtggccctgcagctgcagg 54033
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 337     gtgctcatactgctcctgctg 357
               |||||||||||||||||||||
Sbjct: 6902209 gtgctcatactgctcctgctg 6902189
to top
>dbj|AP006156.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:B1043F11
          Length = 167137

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 337    gtgctcatactgctcctgctg 357
              |||||||||||||||||||||
Sbjct: 130104 gtgctcatactgctcctgctg 130084
to top
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 126     cctgtggaagctgcgcaagtacctg 150
               |||||||||||||||| ||||||||
Sbjct: 5880300 cctgtggaagctgcgcgagtacctg 5880276
to top
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 103     gccagcgccgccgaggccgagctc 126
               ||||||||||||||||||| ||||
Sbjct: 3344956 gccagcgccgccgaggccgcgctc 3344979
to top
>gb|AC120539.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0063D09
              map S1559, complete sequence
          Length = 190721

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 106    agcgccgccgaggccgagct 125
              ||||||||||||||||||||
Sbjct: 172562 agcgccgccgaggccgagct 172543
to top
>ref|XR_002637.1| PREDICTED: Mus musculus hypothetical protein LOC669705 (LOC669705),
            mRNA
          Length = 6443

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 63   tggccctgcagctgcaggca 82
            ||||||||||||||||||||
Sbjct: 3082 tggccctgcagctgcaggca 3101
to top
>ref|XR_005103.1| PREDICTED: Mus musculus hypothetical protein LOC674786 (LOC674786),
            mRNA
          Length = 6443

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 63   tggccctgcagctgcaggca 82
            ||||||||||||||||||||
Sbjct: 3082 tggccctgcagctgcaggca 3101
to top
>ref|XR_002269.1| PREDICTED: Mus musculus hypothetical protein LOC668940 (LOC668940),
            mRNA
          Length = 6443

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 63   tggccctgcagctgcaggca 82
            ||||||||||||||||||||
Sbjct: 3082 tggccctgcagctgcaggca 3101
to top
>ref|XM_534397.2| PREDICTED: Canis familiaris similar to myosin, heavy polypeptide 7B,
            cardiac muscle, beta (LOC477206), mRNA
          Length = 5775

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 63   tggccctgcagctgcaggca 82
            ||||||||||||||||||||
Sbjct: 2483 tggccctgcagctgcaggca 2502
to top
>ref|XM_533672.2| PREDICTED: Canis familiaris similar to translocase of inner
           mitochondrial membrane 50 homolog (LOC476461), mRNA
          Length = 1665

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 ggccagcgccgccgaggccg 121
           ||||||||||||||||||||
Sbjct: 24  ggccagcgccgccgaggccg 5
to top
>emb|BX640447.1| Bordetella bronchiseptica strain RB50, complete genome; segment 11/16
          Length = 349442

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 101    cggccagcgccgccgaggcc 120
              ||||||||||||||||||||
Sbjct: 234899 cggccagcgccgccgaggcc 234880
to top
>emb|BX640437.1| Bordetella bronchiseptica strain RB50, complete genome; segment 1/16
          Length = 347356

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 96     gcagccggccagcgccgccg 115
              ||||||||||||||||||||
Sbjct: 259412 gcagccggccagcgccgccg 259393
to top
>emb|BX640432.1| Bordetella parapertussis strain 12822, complete genome; segment 10/14
          Length = 346301

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 101    cggccagcgccgccgaggcc 120
              ||||||||||||||||||||
Sbjct: 240354 cggccagcgccgccgaggcc 240335
to top
>emb|BX640423.1| Bordetella parapertussis strain 12822, complete genome; segment 1/14
          Length = 348251

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 96     gcagccggccagcgccgccg 115
              ||||||||||||||||||||
Sbjct: 262798 gcagccggccagcgccgccg 262779
to top
>emb|BX640413.1| Bordetella pertussis strain Tohama I, complete genome; segment 3/12
          Length = 349028

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 101    cggccagcgccgccgaggcc 120
              ||||||||||||||||||||
Sbjct: 289298 cggccagcgccgccgaggcc 289317
to top
>emb|BX640412.1| Bordetella pertussis strain Tohama I, complete genome; segment 2/12
          Length = 348171

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 96     gcagccggccagcgccgccg 115
              ||||||||||||||||||||
Sbjct: 205013 gcagccggccagcgccgccg 205032
to top
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                               
Query: 93      ccagcagccggccagcgccgccgaggccgagc 124
               |||||| ||| ||||||||||| |||||||||
Sbjct: 1589353 ccagcatccgcccagcgccgcccaggccgagc 1589322
to top
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 210     cggcttctggcaggacaacgacga 233
               ||||||||||||||||| ||||||
Sbjct: 8576553 cggcttctggcaggacaccgacga 8576576
to top
>ref|XM_230774.3| PREDICTED: Rattus norvegicus myosin, heavy polypeptide 7B, cardiac
            muscle, beta (predicted) (Myh7b_predicted), mRNA
          Length = 6165

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 63   tggccctgcagctgcaggca 82
            ||||||||||||||||||||
Sbjct: 2918 tggccctgcagctgcaggca 2937
to top
>ref|XM_310715.2| Anopheles gambiae str. PEST ENSANGP00000007487 (ENSANGG00000005653),
            partial mRNA
          Length = 5157

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 360  ggagctgaccggcaaggtgg 379
            ||||||||||||||||||||
Sbjct: 4866 ggagctgaccggcaaggtgg 4885
to top
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 101    cggccagcgccgccgaggcc 120
              ||||||||||||||||||||
Sbjct: 924874 cggccagcgccgccgaggcc 924855
to top
>gb|DQ323065.1| Triticum aestivum cadmium tolerance factor mRNA, complete cds
          Length = 2998

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 286  taccatgtcttcttctactgcaac 309
            ||||||| ||||||||||||||||
Sbjct: 1896 taccatgccttcttctactgcaac 1919
to top
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 94      cagcagccggccagcgccgccgag 117
               |||||||||||||||||| |||||
Sbjct: 1667721 cagcagccggccagcgccaccgag 1667744
to top
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 101     cggccagcgccgccgaggccgagc 124
               ||||| ||||||||||||||||||
Sbjct: 2238983 cggcccgcgccgccgaggccgagc 2238960
to top
>emb|AL844852.11| Mouse DNA sequence from clone RP23-260N23 on chromosome 2, complete
              sequence
          Length = 257676

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 63     tggccctgcagctgcaggca 82
              ||||||||||||||||||||
Sbjct: 191125 tggccctgcagctgcaggca 191144
to top
>gb|AC141868.4| Mus musculus BAC clone RP24-418L21 from 8, complete sequence
          Length = 188063

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 10     caaaggaatttcagagccat 29
              ||||||||||||||||||||
Sbjct: 127645 caaaggaatttcagagccat 127664


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,632,119
Number of Sequences: 3902068
Number of extensions: 3632119
Number of successful extensions: 86424
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 84620
Number of HSP's gapped (non-prelim): 1794
length of query: 476
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 454
effective length of database: 17,147,199,772
effective search space: 7784828696488
effective search space used: 7784828696488
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top