ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl12f09 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 58.0 bits (29), Expect = 1e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 81 ctactcctcctctccccgccgccgccgcc 109 ||||||||||||||||||||||||||||| Sbjct: 25424583 ctactcctcctctccccgccgccgccgcc 25424555 Score = 44.1 bits (22), Expect = 0.16 Identities = 25/26 (96%) Strand = Plus / Minus Query: 68 ccgccgtctcctcctactcctcctct 93 ||||||||||||||| |||||||||| Sbjct: 12556626 ccgccgtctcctccttctcctcctct 12556601 Score = 42.1 bits (21), Expect = 0.65 Identities = 21/21 (100%) Strand = Plus / Plus Query: 92 ctccccgccgccgccgccccc 112 ||||||||||||||||||||| Sbjct: 41872797 ctccccgccgccgccgccccc 41872817 Score = 42.1 bits (21), Expect = 0.65 Identities = 24/25 (96%) Strand = Plus / Plus Query: 86 cctcctctccccgccgccgccgccc 110 ||||||| ||||||||||||||||| Sbjct: 24051748 cctcctccccccgccgccgccgccc 24051772 Score = 42.1 bits (21), Expect = 0.65 Identities = 31/33 (93%), Gaps = 1/33 (3%) Strand = Plus / Minus Query: 78 ctcctactcctcct-ctccccgccgccgccgcc 109 |||||||||||||| ||||||||||||| |||| Sbjct: 21387292 ctcctactcctcctcctccccgccgccgacgcc 21387260 Score = 42.1 bits (21), Expect = 0.65 Identities = 24/25 (96%) Strand = Plus / Plus Query: 87 ctcctctccccgccgccgccgcccc 111 |||||| |||||||||||||||||| Sbjct: 7399432 ctcctccccccgccgccgccgcccc 7399456 Score = 40.1 bits (20), Expect = 2.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 83 actcctcctctccccgccgccgccgccc 110 |||||||| ||| ||||||||||||||| Sbjct: 37769025 actcctccgctcgccgccgccgccgccc 37769052 Score = 40.1 bits (20), Expect = 2.6 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Minus Query: 75 ctcctcctactcctcctctcc-ccgccgccgccgcc 109 |||||||| |||||||||||| || ||||||||||| Sbjct: 33203579 ctcctcctcctcctcctctcctcctccgccgccgcc 33203544 Score = 40.1 bits (20), Expect = 2.6 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Minus Query: 75 ctcctcctactcctcctctccccgccgccgccgccc 110 |||||||| ||||||||| | ||||||||||||||| Sbjct: 32361681 ctcctcctcctcctcctc-ctccgccgccgccgccc 32361647 Score = 40.1 bits (20), Expect = 2.6 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 84 ctcctcctc-tccccgccgccgccgccc 110 ||||||||| |||||||||||||||||| Sbjct: 4122578 ctcctcctcctccccgccgccgccgccc 4122605
>dbj|AP004317.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0663E10 Length = 162297 Score = 58.0 bits (29), Expect = 1e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 81 ctactcctcctctccccgccgccgccgcc 109 ||||||||||||||||||||||||||||| Sbjct: 114583 ctactcctcctctccccgccgccgccgcc 114555
>emb|BX005215.13| Mouse DNA sequence from clone RP23-280F9 on chromosome X, complete sequence Length = 189900 Score = 48.1 bits (24), Expect = 0.011 Identities = 33/36 (91%) Strand = Plus / Plus Query: 75 ctcctcctactcctcctctccccgccgccgccgccc 110 |||||||| ||||||||| |||||||||||||||| Sbjct: 40210 ctcctccttctcctcctcctcccgccgccgccgccc 40245
>ref|XM_467165.1| Oryza sativa (japonica cultivar-group), mRNA Length = 681 Score = 46.1 bits (23), Expect = 0.042 Identities = 29/31 (93%) Strand = Plus / Minus Query: 78 ctcctactcctcctctccccgccgccgccgc 108 ||||| ||||||||| ||||||||||||||| Sbjct: 544 ctcctcctcctcctccccccgccgccgccgc 514
>ref|XM_479421.1| Oryza sativa (japonica cultivar-group), mRNA Length = 447 Score = 46.1 bits (23), Expect = 0.042 Identities = 29/31 (93%) Strand = Plus / Minus Query: 75 ctcctcctactcctcctctccccgccgccgc 105 |||||||| ||||||||||| |||||||||| Sbjct: 369 ctcctcctcctcctcctctcgccgccgccgc 339
>ref|XM_958113.1| Neurospora crassa OR74A hypothetical protein (NCU09482.1) partial mRNA Length = 4188 Score = 46.1 bits (23), Expect = 0.042 Identities = 33/35 (94%), Gaps = 1/35 (2%) Strand = Plus / Plus Query: 75 ctcctcctactcctcctctccccgccgccgccgcc 109 |||||||| ||||||||| |||||||||||||||| Sbjct: 1001 ctcctcctcctcctcctc-ccccgccgccgccgcc 1034
>ref|XM_329840.1| Neurospora crassa OR74A hypothetical protein (NCU09482.1) partial mRNA Length = 4188 Score = 46.1 bits (23), Expect = 0.042 Identities = 33/35 (94%), Gaps = 1/35 (2%) Strand = Plus / Plus Query: 75 ctcctcctactcctcctctccccgccgccgccgcc 109 |||||||| ||||||||| |||||||||||||||| Sbjct: 1001 ctcctcctcctcctcctc-ccccgccgccgccgcc 1034
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 46.1 bits (23), Expect = 0.042 Identities = 23/23 (100%) Strand = Plus / Minus Query: 87 ctcctctccccgccgccgccgcc 109 ||||||||||||||||||||||| Sbjct: 10913603 ctcctctccccgccgccgccgcc 10913581 Score = 42.1 bits (21), Expect = 0.65 Identities = 24/25 (96%) Strand = Plus / Minus Query: 85 tcctcctctccccgccgccgccgcc 109 |||||||| |||||||||||||||| Sbjct: 34601868 tcctcctccccccgccgccgccgcc 34601844 Score = 42.1 bits (21), Expect = 0.65 Identities = 24/25 (96%) Strand = Plus / Plus Query: 86 cctcctctccccgccgccgccgccc 110 |||||||||| |||||||||||||| Sbjct: 23620128 cctcctctcctcgccgccgccgccc 23620152 Score = 42.1 bits (21), Expect = 0.65 Identities = 21/21 (100%) Strand = Plus / Minus Query: 89 cctctccccgccgccgccgcc 109 ||||||||||||||||||||| Sbjct: 23249765 cctctccccgccgccgccgcc 23249745 Score = 42.1 bits (21), Expect = 0.65 Identities = 24/25 (96%) Strand = Plus / Plus Query: 87 ctcctctccccgccgccgccgcccc 111 |||||||| |||||||||||||||| Sbjct: 12708027 ctcctctcgccgccgccgccgcccc 12708051 Score = 42.1 bits (21), Expect = 0.65 Identities = 21/21 (100%) Strand = Plus / Plus Query: 92 ctccccgccgccgccgccccc 112 ||||||||||||||||||||| Sbjct: 11657303 ctccccgccgccgccgccccc 11657323 Score = 42.1 bits (21), Expect = 0.65 Identities = 24/25 (96%) Strand = Plus / Minus Query: 84 ctcctcctctccccgccgccgccgc 108 ||||||||| ||||||||||||||| Sbjct: 5932859 ctcctcctccccccgccgccgccgc 5932835 Score = 40.1 bits (20), Expect = 2.6 Identities = 37/40 (92%), Gaps = 2/40 (5%) Strand = Plus / Plus Query: 72 cgtctcctcctactcctcct-ctcc-ccgccgccgccgcc 109 ||||||||||| |||||||| |||| |||||||||||||| Sbjct: 34909028 cgtctcctcctcctcctcctcctcctccgccgccgccgcc 34909067 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 ctccccgccgccgccgcccc 111 |||||||||||||||||||| Sbjct: 34021200 ctccccgccgccgccgcccc 34021219 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 86 cctcctctccccgccgccgccgcc 109 ||||||| |||||||||||||||| Sbjct: 27964709 cctcctcaccccgccgccgccgcc 27964732 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 84 ctcctcctctccccgccgccgccg 107 |||||||||| ||||||||||||| Sbjct: 24402061 ctcctcctctgcccgccgccgccg 24402084 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 cctcctctccccgccgccgccgcc 109 ||||||||| |||||||||||||| Sbjct: 17262060 cctcctctcgccgccgccgccgcc 17262037 Score = 40.1 bits (20), Expect = 2.6 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Plus Query: 75 ctcctcctactcctcctctcc-ccgccgccgccgcc 109 |||||||| ||||||||| || |||||||||||||| Sbjct: 676359 ctcctcctcctcctcctcgccgccgccgccgccgcc 676394
>emb|AL592151.13| Human DNA sequence from clone RP11-351N5 on chromosome 1 Contains a novel gene, the 5' end of the AKT3 gene for v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma) and a CpG island, complete sequence Length = 148345 Score = 46.1 bits (23), Expect = 0.042 Identities = 23/23 (100%) Strand = Plus / Minus Query: 84 ctcctcctctccccgccgccgcc 106 ||||||||||||||||||||||| Sbjct: 103498 ctcctcctctccccgccgccgcc 103476
>gb|AC134769.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1145F05, from chromosome 3, complete sequence Length = 127348 Score = 46.1 bits (23), Expect = 0.042 Identities = 23/23 (100%) Strand = Plus / Plus Query: 87 ctcctctccccgccgccgccgcc 109 ||||||||||||||||||||||| Sbjct: 67426 ctcctctccccgccgccgccgcc 67448
>emb|BX842597.1| Neurospora crassa DNA linkage group II BAC clone B22K18 Length = 75214 Score = 46.1 bits (23), Expect = 0.042 Identities = 33/35 (94%), Gaps = 1/35 (2%) Strand = Plus / Plus Query: 75 ctcctcctactcctcctctccccgccgccgccgcc 109 |||||||| ||||||||| |||||||||||||||| Sbjct: 52311 ctcctcctcctcctcctc-ccccgccgccgccgcc 52344
>emb|BX842596.1| Neurospora crassa DNA linkage group II BAC clone B10K17 Length = 77292 Score = 46.1 bits (23), Expect = 0.042 Identities = 33/35 (94%), Gaps = 1/35 (2%) Strand = Plus / Minus Query: 75 ctcctcctactcctcctctccccgccgccgccgcc 109 |||||||| ||||||||| |||||||||||||||| Sbjct: 65534 ctcctcctcctcctcctc-ccccgccgccgccgcc 65501
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 46.1 bits (23), Expect = 0.042 Identities = 29/31 (93%) Strand = Plus / Plus Query: 75 ctcctcctactcctcctctccccgccgccgc 105 |||||||| ||||||||||| |||||||||| Sbjct: 27916363 ctcctcctcctcctcctctcgccgccgccgc 27916393 Score = 44.1 bits (22), Expect = 0.16 Identities = 25/26 (96%) Strand = Plus / Minus Query: 84 ctcctcctctccccgccgccgccgcc 109 |||||||| ||||||||||||||||| Sbjct: 23771835 ctcctcctgtccccgccgccgccgcc 23771810 Score = 44.1 bits (22), Expect = 0.16 Identities = 22/22 (100%) Strand = Plus / Minus Query: 94 ccccgccgccgccgccccccac 115 |||||||||||||||||||||| Sbjct: 5354876 ccccgccgccgccgccccccac 5354855 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 ctctccccgccgccgccgcc 109 |||||||||||||||||||| Sbjct: 28482682 ctctccccgccgccgccgcc 28482701 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 ctccccgccgccgccgcccc 111 |||||||||||||||||||| Sbjct: 23431640 ctccccgccgccgccgcccc 23431659 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 ctctccccgccgccgccgcc 109 |||||||||||||||||||| Sbjct: 8077220 ctctccccgccgccgccgcc 8077201 Score = 40.1 bits (20), Expect = 2.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 77 cctcctactcctcctctccccgccgccgccgc 108 |||||| ||||||||| |||||||||||||| Sbjct: 6799440 cctcctcctcctcctcctcccgccgccgccgc 6799409
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 46.1 bits (23), Expect = 0.042 Identities = 23/23 (100%) Strand = Plus / Minus Query: 87 ctcctctccccgccgccgccgcc 109 ||||||||||||||||||||||| Sbjct: 10911704 ctcctctccccgccgccgccgcc 10911682 Score = 42.1 bits (21), Expect = 0.65 Identities = 24/25 (96%) Strand = Plus / Minus Query: 85 tcctcctctccccgccgccgccgcc 109 |||||||| |||||||||||||||| Sbjct: 34691940 tcctcctccccccgccgccgccgcc 34691916 Score = 42.1 bits (21), Expect = 0.65 Identities = 24/25 (96%) Strand = Plus / Plus Query: 86 cctcctctccccgccgccgccgccc 110 |||||||||| |||||||||||||| Sbjct: 23613156 cctcctctcctcgccgccgccgccc 23613180 Score = 42.1 bits (21), Expect = 0.65 Identities = 21/21 (100%) Strand = Plus / Minus Query: 89 cctctccccgccgccgccgcc 109 ||||||||||||||||||||| Sbjct: 23242793 cctctccccgccgccgccgcc 23242773 Score = 42.1 bits (21), Expect = 0.65 Identities = 24/25 (96%) Strand = Plus / Plus Query: 87 ctcctctccccgccgccgccgcccc 111 |||||||| |||||||||||||||| Sbjct: 12704790 ctcctctcgccgccgccgccgcccc 12704814 Score = 42.1 bits (21), Expect = 0.65 Identities = 21/21 (100%) Strand = Plus / Plus Query: 92 ctccccgccgccgccgccccc 112 ||||||||||||||||||||| Sbjct: 11654066 ctccccgccgccgccgccccc 11654086 Score = 42.1 bits (21), Expect = 0.65 Identities = 24/25 (96%) Strand = Plus / Minus Query: 84 ctcctcctctccccgccgccgccgc 108 ||||||||| ||||||||||||||| Sbjct: 5932072 ctcctcctccccccgccgccgccgc 5932048 Score = 40.1 bits (20), Expect = 2.6 Identities = 37/40 (92%), Gaps = 2/40 (5%) Strand = Plus / Plus Query: 72 cgtctcctcctactcctcct-ctcc-ccgccgccgccgcc 109 ||||||||||| |||||||| |||| |||||||||||||| Sbjct: 34999100 cgtctcctcctcctcctcctcctcctccgccgccgccgcc 34999139 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 ctccccgccgccgccgcccc 111 |||||||||||||||||||| Sbjct: 34111672 ctccccgccgccgccgcccc 34111691 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 86 cctcctctccccgccgccgccgcc 109 ||||||| |||||||||||||||| Sbjct: 28056033 cctcctcaccccgccgccgccgcc 28056056 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 84 ctcctcctctccccgccgccgccg 107 |||||||||| ||||||||||||| Sbjct: 24319530 ctcctcctctgcccgccgccgccg 24319553 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 cctcctctccccgccgccgccgcc 109 ||||||||| |||||||||||||| Sbjct: 17255601 cctcctctcgccgccgccgccgcc 17255578 Score = 40.1 bits (20), Expect = 2.6 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Plus Query: 75 ctcctcctactcctcctctcc-ccgccgccgccgcc 109 |||||||| ||||||||| || |||||||||||||| Sbjct: 676357 ctcctcctcctcctcctcgccgccgccgccgccgcc 676392
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 46.1 bits (23), Expect = 0.042 Identities = 29/31 (93%) Strand = Plus / Plus Query: 78 ctcctactcctcctctccccgccgccgccgc 108 ||||| ||||||||| ||||||||||||||| Sbjct: 26800226 ctcctcctcctcctccccccgccgccgccgc 26800256 Score = 42.1 bits (21), Expect = 0.65 Identities = 24/25 (96%) Strand = Plus / Plus Query: 63 cgccaccgccgtctcctcctactcc 87 |||||||||||||||||||| |||| Sbjct: 19901569 cgccaccgccgtctcctcctcctcc 19901593 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 86 cctcctctccccgccgccgccgcc 109 ||||||||| |||||||||||||| Sbjct: 29313076 cctcctctcgccgccgccgccgcc 29313099 Score = 40.1 bits (20), Expect = 2.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 61 ggcgccaccgccgtctcctcctactcctcctc 92 |||||||||||| |||||||| ||||||||| Sbjct: 26119254 ggcgccaccgcctcctcctcctcctcctcctc 26119285 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 86 cctcctctccccgccgccgccgcc 109 ||||||||| |||||||||||||| Sbjct: 20025380 cctcctctctccgccgccgccgcc 20025403 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 ctccccgccgccgccgcccc 111 |||||||||||||||||||| Sbjct: 19045971 ctccccgccgccgccgcccc 19045952 Score = 40.1 bits (20), Expect = 2.6 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 78 ctcctactcctcctctccccgccgccgccgcc 109 ||||| ||||||||| |||||||||||||||| Sbjct: 9522822 ctcctcctcctcctc-ccccgccgccgccgcc 9522852 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 ctcctactcctcctctcccc 97 |||||||||||||||||||| Sbjct: 7224913 ctcctactcctcctctcccc 7224894
>dbj|AP005452.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0453E03 Length = 159980 Score = 46.1 bits (23), Expect = 0.042 Identities = 29/31 (93%) Strand = Plus / Plus Query: 75 ctcctcctactcctcctctccccgccgccgc 105 |||||||| ||||||||||| |||||||||| Sbjct: 79721 ctcctcctcctcctcctctcgccgccgccgc 79751
>dbj|AP003825.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1343_D04 Length = 143407 Score = 46.1 bits (23), Expect = 0.042 Identities = 29/31 (93%) Strand = Plus / Plus Query: 75 ctcctcctactcctcctctccccgccgccgc 105 |||||||| ||||||||||| |||||||||| Sbjct: 5697 ctcctcctcctcctcctctcgccgccgccgc 5727
>dbj|AP005072.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0708H12 Length = 162381 Score = 46.1 bits (23), Expect = 0.042 Identities = 29/31 (93%) Strand = Plus / Plus Query: 78 ctcctactcctcctctccccgccgccgccgc 108 ||||| ||||||||| ||||||||||||||| Sbjct: 162256 ctcctcctcctcctccccccgccgccgccgc 162286
>dbj|AP004883.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0516F12 Length = 146364 Score = 46.1 bits (23), Expect = 0.042 Identities = 29/31 (93%) Strand = Plus / Plus Query: 78 ctcctactcctcctctccccgccgccgccgc 108 ||||| ||||||||| ||||||||||||||| Sbjct: 66279 ctcctcctcctcctccccccgccgccgccgc 66309
>dbj|AK107709.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-132-D08, full insert sequence Length = 610 Score = 46.1 bits (23), Expect = 0.042 Identities = 23/23 (100%) Strand = Plus / Plus Query: 87 ctcctctccccgccgccgccgcc 109 ||||||||||||||||||||||| Sbjct: 416 ctcctctccccgccgccgccgcc 438
>emb|AL731822.31| Mouse DNA sequence from clone RP23-105H6 on chromosome 2, complete sequence Length = 218037 Score = 46.1 bits (23), Expect = 0.042 Identities = 23/23 (100%) Strand = Plus / Plus Query: 94 ccccgccgccgccgccccccaca 116 ||||||||||||||||||||||| Sbjct: 156143 ccccgccgccgccgccccccaca 156165
>ref|NM_104789.1| Arabidopsis thaliana unknown protein AT1G61080 mRNA, complete cds Length = 2724 Score = 44.1 bits (22), Expect = 0.16 Identities = 28/30 (93%) Strand = Plus / Plus Query: 63 cgccaccgccgtctcctcctactcctcctc 92 ||||||||||| |||||||| ||||||||| Sbjct: 1247 cgccaccgccgcctcctcctcctcctcctc 1276
>ref|XM_480521.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1041 Score = 44.1 bits (22), Expect = 0.16 Identities = 25/26 (96%) Strand = Plus / Plus Query: 84 ctcctcctctccccgccgccgccgcc 109 ||||||||||| |||||||||||||| Sbjct: 9 ctcctcctctcgccgccgccgccgcc 34
>gb|DQ214428.1| Taeniopygia guttata clone 0058P0045D05 mitochondrial ribosomal protein L40 variant 2 internal polyA priming-like mRNA, complete sequence Length = 737 Score = 44.1 bits (22), Expect = 0.16 Identities = 25/26 (96%) Strand = Plus / Minus Query: 96 ccgccgccgccgccccccacatggcc 121 |||||||||||||| ||||||||||| Sbjct: 39 ccgccgccgccgccgcccacatggcc 14
>gb|DQ214427.1| Taeniopygia guttata clone 0058P0012E11 mitochondrial ribosomal protein L40 variant 3 internal polyA priming-like mRNA, complete sequence Length = 774 Score = 44.1 bits (22), Expect = 0.16 Identities = 25/26 (96%) Strand = Plus / Minus Query: 96 ccgccgccgccgccccccacatggcc 121 |||||||||||||| ||||||||||| Sbjct: 67 ccgccgccgccgccgcccacatggcc 42
>gb|DQ214426.1| Taeniopygia guttata clone 0058P0001A07 mitochondrial ribosomal protein L40 variant 3 internal polyA priming-like mRNA, complete sequence Length = 736 Score = 44.1 bits (22), Expect = 0.16 Identities = 25/26 (96%) Strand = Plus / Minus Query: 96 ccgccgccgccgccccccacatggcc 121 |||||||||||||| ||||||||||| Sbjct: 67 ccgccgccgccgccgcccacatggcc 42
>gb|DQ214425.1| Taeniopygia guttata clone 0058P0016D07 mitochondrial ribosomal protein L40 variant 3 internal polyA priming-like mRNA, complete sequence Length = 774 Score = 44.1 bits (22), Expect = 0.16 Identities = 25/26 (96%) Strand = Plus / Minus Query: 96 ccgccgccgccgccccccacatggcc 121 |||||||||||||| ||||||||||| Sbjct: 67 ccgccgccgccgccgcccacatggcc 42
>gb|DQ214424.1| Taeniopygia guttata clone 0058P0012D11 mitochondrial ribosomal protein L40 variant 3 internal polyA priming-like mRNA, complete sequence Length = 774 Score = 44.1 bits (22), Expect = 0.16 Identities = 25/26 (96%) Strand = Plus / Minus Query: 96 ccgccgccgccgccccccacatggcc 121 |||||||||||||| ||||||||||| Sbjct: 67 ccgccgccgccgccgcccacatggcc 42
>ref|NM_197740.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBa0042H09.5), mRNA Length = 2727 Score = 44.1 bits (22), Expect = 0.16 Identities = 28/30 (93%) Strand = Plus / Plus Query: 63 cgccaccgccgtctcctcctactcctcctc 92 ||||||||||| |||||||| ||||||||| Sbjct: 372 cgccaccgccgcctcctcctcctcctcctc 401
>ref|NM_196826.1| Oryza sativa (japonica cultivar-group) putative spliceosomal protein (OSJNBa0018F16.6), mRNA Length = 1363 Score = 44.1 bits (22), Expect = 0.16 Identities = 25/26 (96%) Strand = Plus / Plus Query: 84 ctcctcctctccccgccgccgccgcc 109 ||||||||||| |||||||||||||| Sbjct: 25 ctcctcctctcgccgccgccgccgcc 50
>ref|NM_187019.1| Oryza sativa (japonica cultivar-group), mRNA Length = 642 Score = 44.1 bits (22), Expect = 0.16 Identities = 25/26 (96%) Strand = Plus / Plus Query: 84 ctcctcctctccccgccgccgccgcc 109 |||||||| ||||||||||||||||| Sbjct: 149 ctcctcctgtccccgccgccgccgcc 174
>ref|XM_472769.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1830 Score = 44.1 bits (22), Expect = 0.16 Identities = 29/30 (96%), Gaps = 1/30 (3%) Strand = Plus / Plus Query: 84 ctcctcctctcc-ccgccgccgccgccccc 112 |||||||||||| ||||||||||||||||| Sbjct: 478 ctcctcctctccgccgccgccgccgccccc 507
>ref|XM_472338.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 990 Score = 44.1 bits (22), Expect = 0.16 Identities = 38/42 (90%), Gaps = 1/42 (2%) Strand = Plus / Minus Query: 68 ccgccgtctcctcctactcctcctctccccgccgccgccgcc 109 ||||| ||||||||| | |||||| ||||||||||||||||| Sbjct: 481 ccgccttctcctcctccccctcct-tccccgccgccgccgcc 441
>gb|AC150654.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0094L06, complete sequence Length = 189328 Score = 44.1 bits (22), Expect = 0.16 Identities = 25/26 (96%) Strand = Plus / Plus Query: 68 ccgccgtctcctcctactcctcctct 93 ||||||||||||||| |||||||||| Sbjct: 162896 ccgccgtctcctcctcctcctcctct 162921
>gb|AC114012.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0079H11, complete sequence Length = 143925 Score = 44.1 bits (22), Expect = 0.16 Identities = 25/26 (96%) Strand = Plus / Plus Query: 68 ccgccgtctcctcctactcctcctct 93 ||||||||||||||| |||||||||| Sbjct: 42216 ccgccgtctcctcctcctcctcctct 42241
>ref|NM_010056.2| Mus musculus distal-less homeobox 5 (Dlx5), transcript variant 1, mRNA Length = 1431 Score = 44.1 bits (22), Expect = 0.16 Identities = 32/34 (94%), Gaps = 1/34 (2%) Strand = Plus / Plus Query: 77 cctcctactcctcctc-tccccgccgccgccgcc 109 |||||| ||||||||| ||||||||||||||||| Sbjct: 25 cctcctcctcctcctcctccccgccgccgccgcc 58 Score = 40.1 bits (20), Expect = 2.6 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Plus Query: 75 ctcctcctactcctcctctcc-ccgccgccgccgcc 109 |||||||| ||||||||| || |||||||||||||| Sbjct: 26 ctcctcctcctcctcctccccgccgccgccgccgcc 61
>ref|NM_198854.1| Mus musculus distal-less homeobox 5 (Dlx5), transcript variant 2, mRNA Length = 1349 Score = 44.1 bits (22), Expect = 0.16 Identities = 32/34 (94%), Gaps = 1/34 (2%) Strand = Plus / Plus Query: 77 cctcctactcctcctc-tccccgccgccgccgcc 109 |||||| ||||||||| ||||||||||||||||| Sbjct: 25 cctcctcctcctcctcctccccgccgccgccgcc 58 Score = 40.1 bits (20), Expect = 2.6 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Plus Query: 75 ctcctcctactcctcctctcc-ccgccgccgccgcc 109 |||||||| ||||||||| || |||||||||||||| Sbjct: 26 ctcctcctcctcctcctccccgccgccgccgccgcc 61
>gb|AC130529.2| Mus musculus BAC clone RP23-124O11 from chromosome 16, complete sequence Length = 231967 Score = 44.1 bits (22), Expect = 0.16 Identities = 22/22 (100%) Strand = Plus / Minus Query: 75 ctcctcctactcctcctctccc 96 |||||||||||||||||||||| Sbjct: 45750 ctcctcctactcctcctctccc 45729
>gb|AC102062.9| Mus musculus chromosome 19, clone RP23-217B9, complete sequence Length = 253774 Score = 44.1 bits (22), Expect = 0.16 Identities = 31/34 (91%) Strand = Plus / Plus Query: 79 tcctactcctcctctccccgccgccgccgccccc 112 |||| ||||||||| |||||||||||||||||| Sbjct: 173508 tcctcctcctcctcctcccgccgccgccgccccc 173541
>gb|AC137742.3| Mus musculus BAC clone RP24-345F6 from chromosome 16, complete sequence Length = 170248 Score = 44.1 bits (22), Expect = 0.16 Identities = 22/22 (100%) Strand = Plus / Minus Query: 75 ctcctcctactcctcctctccc 96 |||||||||||||||||||||| Sbjct: 125696 ctcctcctactcctcctctccc 125675
>gb|AC124357.3| Mus musculus BAC clone RP24-490K11 from chromosome 19, complete sequence Length = 154460 Score = 44.1 bits (22), Expect = 0.16 Identities = 31/34 (91%) Strand = Plus / Minus Query: 79 tcctactcctcctctccccgccgccgccgccccc 112 |||| ||||||||| |||||||||||||||||| Sbjct: 34178 tcctcctcctcctcctcccgccgccgccgccccc 34145
>gb|AC157576.4| Mus musculus chromosome 18, clone RP24-252J16, complete sequence Length = 164440 Score = 44.1 bits (22), Expect = 0.16 Identities = 28/30 (93%) Strand = Plus / Minus Query: 63 cgccaccgccgtctcctcctactcctcctc 92 ||||||||||| |||||||| ||||||||| Sbjct: 8663 cgccaccgccgcctcctcctcctcctcctc 8634
>emb|AL611964.26| Human DNA sequence from clone RP11-443J19 on chromosome 1 Contains the 5' end of a novel gene (FLJ10876) and a CpG island, complete sequence Length = 32602 Score = 44.1 bits (22), Expect = 0.16 Identities = 31/34 (91%) Strand = Plus / Plus Query: 63 cgccaccgccgtctcctcctactcctcctctccc 96 |||| ||||||||||||||| |||||||| |||| Sbjct: 11314 cgccgccgccgtctcctcctcctcctcctttccc 11347
>gb|BT008956.1| Triticum aestivum clone wdk1c.pk011.o13:fis, full insert mRNA sequence Length = 1426 Score = 44.1 bits (22), Expect = 0.16 Identities = 22/22 (100%) Strand = Plus / Plus Query: 65 ccaccgccgtctcctcctactc 86 |||||||||||||||||||||| Sbjct: 34 ccaccgccgtctcctcctactc 55
>emb|BX842605.1|OSJN00299 Oryza sativa genomic DNA, chromosome 4, BAC clone: B1358B12, complete sequence Length = 131246 Score = 44.1 bits (22), Expect = 0.16 Identities = 29/30 (96%), Gaps = 1/30 (3%) Strand = Plus / Plus Query: 84 ctcctcctctcc-ccgccgccgccgccccc 112 |||||||||||| ||||||||||||||||| Sbjct: 103142 ctcctcctctccgccgccgccgccgccccc 103171
>emb|AL662987.3|OSJN00188 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0088A01, complete sequence Length = 186325 Score = 44.1 bits (22), Expect = 0.16 Identities = 40/46 (86%) Strand = Plus / Minus Query: 84 ctcctcctctccccgccgccgccgccccccacatggccgacacgca 129 ||||||||| ||||| |||||| || |||||||||||| |||||| Sbjct: 184780 ctcctcctcctcccgctgccgcctcctcccacatggccgtcacgca 184735
>emb|AL662957.2|OSJN00157 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0013K16, complete sequence Length = 145739 Score = 44.1 bits (22), Expect = 0.16 Identities = 40/46 (86%) Strand = Plus / Minus Query: 84 ctcctcctctccccgccgccgccgccccccacatggccgacacgca 129 ||||||||| ||||| |||||| || |||||||||||| |||||| Sbjct: 14453 ctcctcctcctcccgctgccgcctcctcccacatggccgtcacgca 14408
>dbj|AK131312.1| Homo sapiens cDNA FLJ16298 fis, clone PERIC2007068, moderately similar to Mus musculus mRNA for 1A13 protein Length = 1824 Score = 44.1 bits (22), Expect = 0.16 Identities = 31/34 (91%) Strand = Plus / Plus Query: 63 cgccaccgccgtctcctcctactcctcctctccc 96 |||| ||||||||||||||| |||||||| |||| Sbjct: 58 cgccgccgccgtctcctcctcctcctcctttccc 91
>gb|AC025905.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0018F16, complete sequence Length = 179157 Score = 44.1 bits (22), Expect = 0.16 Identities = 25/26 (96%) Strand = Plus / Plus Query: 84 ctcctcctctccccgccgccgccgcc 109 ||||||||||| |||||||||||||| Sbjct: 115518 ctcctcctctcgccgccgccgccgcc 115543
>gb|AC079874.21| Oryza sativa chromosome 10 BAC OSJNBa0042H09 genomic sequence, complete sequence Length = 144191 Score = 44.1 bits (22), Expect = 0.16 Identities = 28/30 (93%) Strand = Plus / Minus Query: 63 cgccaccgccgtctcctcctactcctcctc 92 ||||||||||| |||||||| ||||||||| Sbjct: 45441 cgccaccgccgcctcctcctcctcctcctc 45412
>dbj|AK158121.1| Mus musculus adult inner ear cDNA, RIKEN full-length enriched library, clone:F930032M16 product:distal-less homeobox 5, full insert sequence Length = 1392 Score = 44.1 bits (22), Expect = 0.16 Identities = 32/34 (94%), Gaps = 1/34 (2%) Strand = Plus / Plus Query: 77 cctcctactcctcctc-tccccgccgccgccgcc 109 |||||| ||||||||| ||||||||||||||||| Sbjct: 40 cctcctcctcctcctcctccccgccgccgccgcc 73 Score = 40.1 bits (20), Expect = 2.6 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Plus Query: 75 ctcctcctactcctcctctcc-ccgccgccgccgcc 109 |||||||| ||||||||| || |||||||||||||| Sbjct: 41 ctcctcctcctcctcctccccgccgccgccgccgcc 76
>gb|AF072453.1|AF072453 Mus musculus homeodomain protein DLX5 variant (Dlx5) mRNA, complete cds Length = 1349 Score = 44.1 bits (22), Expect = 0.16 Identities = 32/34 (94%), Gaps = 1/34 (2%) Strand = Plus / Plus Query: 77 cctcctactcctcctc-tccccgccgccgccgcc 109 |||||| ||||||||| ||||||||||||||||| Sbjct: 25 cctcctcctcctcctcctccccgccgccgccgcc 58 Score = 40.1 bits (20), Expect = 2.6 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Plus Query: 75 ctcctcctactcctcctctcc-ccgccgccgccgcc 109 |||||||| ||||||||| || |||||||||||||| Sbjct: 26 ctcctcctcctcctcctccccgccgccgccgccgcc 61
>gb|AF072452.1|AF072452 Mus musculus homeodomain protein DLX5 (Dlx5) mRNA, complete cds Length = 1431 Score = 44.1 bits (22), Expect = 0.16 Identities = 32/34 (94%), Gaps = 1/34 (2%) Strand = Plus / Plus Query: 77 cctcctactcctcctc-tccccgccgccgccgcc 109 |||||| ||||||||| ||||||||||||||||| Sbjct: 25 cctcctcctcctcctcctccccgccgccgccgcc 58 Score = 40.1 bits (20), Expect = 2.6 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Plus Query: 75 ctcctcctactcctcctctcc-ccgccgccgccgcc 109 |||||||| ||||||||| || |||||||||||||| Sbjct: 26 ctcctcctcctcctcctccccgccgccgccgccgcc 61
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.16 Identities = 40/46 (86%) Strand = Plus / Minus Query: 84 ctcctcctctccccgccgccgccgccccccacatggccgacacgca 129 ||||||||| ||||| |||||| || |||||||||||| |||||| Sbjct: 29511764 ctcctcctcctcccgctgccgcctcctcccacatggccgtcacgca 29511719 Score = 44.1 bits (22), Expect = 0.16 Identities = 29/30 (96%), Gaps = 1/30 (3%) Strand = Plus / Plus Query: 84 ctcctcctctcc-ccgccgccgccgccccc 112 |||||||||||| ||||||||||||||||| Sbjct: 23106802 ctcctcctctccgccgccgccgccgccccc 23106831 Score = 44.1 bits (22), Expect = 0.16 Identities = 38/42 (90%), Gaps = 1/42 (2%) Strand = Plus / Plus Query: 68 ccgccgtctcctcctactcctcctctccccgccgccgccgcc 109 ||||| ||||||||| | |||||| ||||||||||||||||| Sbjct: 19623859 ccgccttctcctcctccccctcct-tccccgccgccgccgcc 19623899 Score = 42.1 bits (21), Expect = 0.65 Identities = 30/33 (90%) Strand = Plus / Minus Query: 77 cctcctactcctcctctccccgccgccgccgcc 109 |||||| ||||||||||| |||| ||||||||| Sbjct: 18732357 cctcctcctcctcctctcgccgcggccgccgcc 18732325 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 ctcggtcccacttgtcatac 22 |||||||||||||||||||| Sbjct: 19355981 ctcggtcccacttgtcatac 19355962 Score = 40.1 bits (20), Expect = 2.6 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Minus Query: 75 ctcctcctactcctcctctcc-ccgccgccgccgcc 109 |||||||| ||||||||| || |||||||||||||| Sbjct: 18415836 ctcctcctcctcctcctcgccgccgccgccgccgcc 18415801 Score = 40.1 bits (20), Expect = 2.6 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 75 ctcctcctactcctcctctcc-ccgccgccgc 105 |||||||| |||||||||||| |||||||||| Sbjct: 14182073 ctcctcctcctcctcctctcctccgccgccgc 14182104
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.16 Identities = 25/26 (96%) Strand = Plus / Plus Query: 68 ccgccgtctcctcctactcctcctct 93 ||||||||||||||| |||||||||| Sbjct: 16176896 ccgccgtctcctcctcctcctcctct 16176921 Score = 40.1 bits (20), Expect = 2.6 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Minus Query: 74 tctcctcctactcctcctctccccgccgccgccgcc 109 ||||||||| ||||||||| | |||||||||||||| Sbjct: 23797457 tctcctcctcctcctcctc-cgccgccgccgccgcc 23797423 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 tctcctcctactcctcctctcccc 97 ||||||||| |||||||||||||| Sbjct: 19281514 tctcctcctcctcctcctctcccc 19281537
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 44.1 bits (22), Expect = 0.16 Identities = 28/30 (93%) Strand = Plus / Plus Query: 63 cgccaccgccgtctcctcctactcctcctc 92 ||||||||||| |||||||| ||||||||| Sbjct: 21564616 cgccaccgccgcctcctcctcctcctcctc 21564645 Score = 44.1 bits (22), Expect = 0.16 Identities = 25/26 (96%) Strand = Plus / Plus Query: 84 ctcctcctctccccgccgccgccgcc 109 ||||||||||| |||||||||||||| Sbjct: 16236629 ctcctcctctcgccgccgccgccgcc 16236654 Score = 42.1 bits (21), Expect = 0.65 Identities = 34/37 (91%), Gaps = 1/37 (2%) Strand = Plus / Plus Query: 74 tctcctcctactcctcctctc-cccgccgccgccgcc 109 ||||||||| ||||||||||| || |||||||||||| Sbjct: 20712628 tctcctcctcctcctcctctcgccggccgccgccgcc 20712664 Score = 40.1 bits (20), Expect = 2.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 84 ctcctcctctccccgccgccgccgccccccac 115 ||||||| ||||||||||||||||| ||||| Sbjct: 19737952 ctcctccagtccccgccgccgccgccgcccac 19737983 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 tctcctcctactcctcctctcccc 97 ||||||||| |||||||||||||| Sbjct: 15666831 tctcctcctcctcctcctctcccc 15666808 Score = 40.1 bits (20), Expect = 2.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 86 cctcctctccccgccgccgccgcccccc 113 ||||||| ||||||||||||||| |||| Sbjct: 13290478 cctcctccccccgccgccgccgctcccc 13290451
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 44.1 bits (22), Expect = 0.16 Identities = 25/26 (96%) Strand = Plus / Minus Query: 84 ctcctcctctccccgccgccgccgcc 109 ||||||||| |||||||||||||||| Sbjct: 20661145 ctcctcctccccccgccgccgccgcc 20661120 Score = 42.1 bits (21), Expect = 0.65 Identities = 24/25 (96%) Strand = Plus / Plus Query: 68 ccgccgtctcctcctactcctcctc 92 ||||||||||||||| ||||||||| Sbjct: 19396637 ccgccgtctcctcctcctcctcctc 19396661 Score = 42.1 bits (21), Expect = 0.65 Identities = 27/29 (93%) Strand = Plus / Plus Query: 83 actcctcctctccccgccgccgccgcccc 111 ||||||||||||| |||||||||| |||| Sbjct: 16567579 actcctcctctcctcgccgccgcctcccc 16567607 Score = 42.1 bits (21), Expect = 0.65 Identities = 21/21 (100%) Strand = Plus / Minus Query: 100 cgccgccgccccccacatggc 120 ||||||||||||||||||||| Sbjct: 12507984 cgccgccgccccccacatggc 12507964 Score = 40.1 bits (20), Expect = 2.6 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Plus Query: 75 ctcctcctactcctcctctcc-ccgccgccgccgcc 109 |||||||| ||||||||| || |||||||||||||| Sbjct: 16904090 ctcctcctcctcctcctcgccgccgccgccgccgcc 16904125 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 ccgccgccgccgccccccac 115 |||||||||||||||||||| Sbjct: 16070713 ccgccgccgccgccccccac 16070694 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 tccccgccgccgccgccccc 112 |||||||||||||||||||| Sbjct: 15384076 tccccgccgccgccgccccc 15384057
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.16 Identities = 25/26 (96%) Strand = Plus / Minus Query: 84 ctcctcctctccccgccgccgccgcc 109 ||||||||||| |||||||||||||| Sbjct: 5568032 ctcctcctctcgccgccgccgccgcc 5568007 Score = 42.1 bits (21), Expect = 0.65 Identities = 30/33 (90%) Strand = Plus / Plus Query: 74 tctcctcctactcctcctctccccgccgccgcc 106 ||||||||| ||||||||| |||||||||||| Sbjct: 26140023 tctcctcctcctcctcctcctcccgccgccgcc 26140055 Score = 42.1 bits (21), Expect = 0.65 Identities = 31/33 (93%), Gaps = 1/33 (3%) Strand = Plus / Minus Query: 77 cctcctactcctcctctccccgccgccgccgcc 109 |||||| ||||||||| |||||||||||||||| Sbjct: 11547677 cctcctcctcctcctc-ccccgccgccgccgcc 11547646 Score = 42.1 bits (21), Expect = 0.65 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 84 ctcctcctctcc-ccgccgccgccgcccc 111 |||||||||||| |||||||||||||||| Sbjct: 3037302 ctcctcctctccgccgccgccgccgcccc 3037274 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 ctccccgccgccgccgcccc 111 |||||||||||||||||||| Sbjct: 24632128 ctccccgccgccgccgcccc 24632109 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 84 ctcctcctctccccgccgccgccg 107 ||||||| |||||||||||||||| Sbjct: 3923037 ctcctcccctccccgccgccgccg 3923014
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.16 Identities = 25/26 (96%) Strand = Plus / Plus Query: 84 ctcctcctctccccgccgccgccgcc 109 ||||||| |||||||||||||||||| Sbjct: 28418043 ctcctcccctccccgccgccgccgcc 28418068 Score = 44.1 bits (22), Expect = 0.16 Identities = 35/38 (92%), Gaps = 1/38 (2%) Strand = Plus / Plus Query: 72 cgtctcctcctactcctcctctccccgccgccgccgcc 109 ||||||||||| ||||||||| | |||||||||||||| Sbjct: 18996515 cgtctcctcctcctcctcctc-cgccgccgccgccgcc 18996551 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 84 ctcctcctctccccgccgccgccg 107 |||| ||||||||||||||||||| Sbjct: 17337665 ctccgcctctccccgccgccgccg 17337688 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 tctcctcctactcctcctctcccc 97 ||||||||| |||||||||||||| Sbjct: 7855585 tctcctcctcctcctcctctcccc 7855562 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 ccgccgccgccgccccccac 115 |||||||||||||||||||| Sbjct: 3375663 ccgccgccgccgccccccac 3375682
>gb|AC018908.8|AC018908 Arabidopsis thaliana chromosome 1 BAC T7P1 genomic sequence, complete sequence Length = 102299 Score = 44.1 bits (22), Expect = 0.16 Identities = 28/30 (93%) Strand = Plus / Minus Query: 63 cgccaccgccgtctcctcctactcctcctc 92 ||||||||||| |||||||| ||||||||| Sbjct: 90135 cgccaccgccgcctcctcctcctcctcctc 90106
>gb|AC099405.3| Papio anubis clone RP41-161K2, complete sequence Length = 142943 Score = 44.1 bits (22), Expect = 0.16 Identities = 28/30 (93%) Strand = Plus / Plus Query: 63 cgccaccgccgtctcctcctactcctcctc 92 ||||||||||| |||||||| ||||||||| Sbjct: 69736 cgccaccgccgcctcctcctcctcctcctc 69765
>dbj|AP005092.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1112_E07 Length = 132055 Score = 44.1 bits (22), Expect = 0.16 Identities = 25/26 (96%) Strand = Plus / Minus Query: 84 ctcctcctctccccgccgccgccgcc 109 ||||||||| |||||||||||||||| Sbjct: 54756 ctcctcctccccccgccgccgccgcc 54731
>dbj|AP003935.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0661G04 Length = 157292 Score = 44.1 bits (22), Expect = 0.16 Identities = 25/26 (96%) Strand = Plus / Plus Query: 84 ctcctcctctccccgccgccgccgcc 109 ||||||| |||||||||||||||||| Sbjct: 130621 ctcctcccctccccgccgccgccgcc 130646
>dbj|AP005314.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0515E01 Length = 140063 Score = 44.1 bits (22), Expect = 0.16 Identities = 25/26 (96%) Strand = Plus / Minus Query: 84 ctcctcctctccccgccgccgccgcc 109 ||||||||| |||||||||||||||| Sbjct: 126803 ctcctcctccccccgccgccgccgcc 126778
>dbj|AP004730.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0009J19 Length = 156988 Score = 44.1 bits (22), Expect = 0.16 Identities = 35/38 (92%), Gaps = 1/38 (2%) Strand = Plus / Plus Query: 72 cgtctcctcctactcctcctctccccgccgccgccgcc 109 ||||||||||| ||||||||| | |||||||||||||| Sbjct: 89185 cgtctcctcctcctcctcctc-cgccgccgccgccgcc 89221
>dbj|AP005457.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0532H03 Length = 166128 Score = 44.1 bits (22), Expect = 0.16 Identities = 25/26 (96%) Strand = Plus / Plus Query: 84 ctcctcctctccccgccgccgccgcc 109 ||||||| |||||||||||||||||| Sbjct: 25076 ctcctcccctccccgccgccgccgcc 25101
>dbj|AP002971.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0537A05 Length = 152396 Score = 44.1 bits (22), Expect = 0.16 Identities = 25/26 (96%) Strand = Plus / Minus Query: 68 ccgccgtctcctcctactcctcctct 93 ||||||||||||||| |||||||||| Sbjct: 68236 ccgccgtctcctccttctcctcctct 68211
>dbj|AP004358.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1135C02 Length = 152306 Score = 44.1 bits (22), Expect = 0.16 Identities = 25/26 (96%) Strand = Plus / Minus Query: 68 ccgccgtctcctcctactcctcctct 93 ||||||||||||||| |||||||||| Sbjct: 142241 ccgccgtctcctccttctcctcctct 142216
>dbj|AP005437.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1113_E01 Length = 73706 Score = 44.1 bits (22), Expect = 0.16 Identities = 25/26 (96%) Strand = Plus / Minus Query: 84 ctcctcctctccccgccgccgccgcc 109 |||||||| ||||||||||||||||| Sbjct: 26765 ctcctcctgtccccgccgccgccgcc 26740
>dbj|AP005257.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0417F02 Length = 150660 Score = 44.1 bits (22), Expect = 0.16 Identities = 22/22 (100%) Strand = Plus / Minus Query: 94 ccccgccgccgccgccccccac 115 |||||||||||||||||||||| Sbjct: 89240 ccccgccgccgccgccccccac 89219
>gb|AY789612.1| Heteropogon contortus voucher PI364892 USDA FL gene, partial cds Length = 978 Score = 44.1 bits (22), Expect = 0.16 Identities = 22/22 (100%) Strand = Plus / Minus Query: 89 cctctccccgccgccgccgccc 110 |||||||||||||||||||||| Sbjct: 881 cctctccccgccgccgccgccc 860
>dbj|AP005499.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0412D08 Length = 150188 Score = 44.1 bits (22), Expect = 0.16 Identities = 25/26 (96%) Strand = Plus / Minus Query: 84 ctcctcctctccccgccgccgccgcc 109 ||||||||||| |||||||||||||| Sbjct: 23408 ctcctcctctcgccgccgccgccgcc 23383
>dbj|AP004746.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0035F08 Length = 167446 Score = 44.1 bits (22), Expect = 0.16 Identities = 25/26 (96%) Strand = Plus / Minus Query: 84 ctcctcctctccccgccgccgccgcc 109 ||||||||||| |||||||||||||| Sbjct: 94260 ctcctcctctcgccgccgccgccgcc 94235
>dbj|AK121890.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033105B22, full insert sequence Length = 1752 Score = 44.1 bits (22), Expect = 0.16 Identities = 35/38 (92%), Gaps = 1/38 (2%) Strand = Plus / Minus Query: 72 cgtctcctcctactcctcctctccccgccgccgccgcc 109 ||||||||||| ||||||||| | |||||||||||||| Sbjct: 390 cgtctcctcctcctcctcctc-cgccgccgccgccgcc 354
>dbj|AK103490.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033130N07, full insert sequence Length = 1385 Score = 44.1 bits (22), Expect = 0.16 Identities = 25/26 (96%) Strand = Plus / Plus Query: 84 ctcctcctctccccgccgccgccgcc 109 ||||||||||| |||||||||||||| Sbjct: 47 ctcctcctctcgccgccgccgccgcc 72
>dbj|AK070024.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023038G05, full insert sequence Length = 1440 Score = 44.1 bits (22), Expect = 0.16 Identities = 25/26 (96%) Strand = Plus / Plus Query: 84 ctcctcctctccccgccgccgccgcc 109 ||||||||| |||||||||||||||| Sbjct: 1169 ctcctcctccccccgccgccgccgcc 1194
>dbj|AK060554.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-B11, full insert sequence Length = 1313 Score = 44.1 bits (22), Expect = 0.16 Identities = 25/26 (96%) Strand = Plus / Plus Query: 84 ctcctcctctccccgccgccgccgcc 109 ||||||||||| |||||||||||||| Sbjct: 50 ctcctcctctcgccgccgccgccgcc 75
>emb|AL512547.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: B0812A04, complete sequence Length = 43144 Score = 44.1 bits (22), Expect = 0.16 Identities = 29/30 (96%), Gaps = 1/30 (3%) Strand = Plus / Plus Query: 84 ctcctcctctcc-ccgccgccgccgccccc 112 |||||||||||| ||||||||||||||||| Sbjct: 27722 ctcctcctctccgccgccgccgccgccccc 27751
>gb|AC109258.12| Mus musculus chromosome 18, clone RP23-364K17, complete sequence Length = 232399 Score = 44.1 bits (22), Expect = 0.16 Identities = 28/30 (93%) Strand = Plus / Plus Query: 63 cgccaccgccgtctcctcctactcctcctc 92 ||||||||||| |||||||| ||||||||| Sbjct: 36669 cgccaccgccgcctcctcctcctcctcctc 36698
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 44.1 bits (22), Expect = 0.16 Identities = 28/30 (93%) Strand = Plus / Plus Query: 63 cgccaccgccgtctcctcctactcctcctc 92 ||||||||||| |||||||| ||||||||| Sbjct: 21576279 cgccaccgccgcctcctcctcctcctcctc 21576308 Score = 44.1 bits (22), Expect = 0.16 Identities = 25/26 (96%) Strand = Plus / Plus Query: 84 ctcctcctctccccgccgccgccgcc 109 ||||||||||| |||||||||||||| Sbjct: 16244870 ctcctcctctcgccgccgccgccgcc 16244895 Score = 42.1 bits (21), Expect = 0.65 Identities = 34/37 (91%), Gaps = 1/37 (2%) Strand = Plus / Plus Query: 74 tctcctcctactcctcctctc-cccgccgccgccgcc 109 ||||||||| ||||||||||| || |||||||||||| Sbjct: 20723900 tctcctcctcctcctcctctcgccggccgccgccgcc 20723936 Score = 40.1 bits (20), Expect = 2.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 84 ctcctcctctccccgccgccgccgccccccac 115 ||||||| ||||||||||||||||| ||||| Sbjct: 19749228 ctcctccagtccccgccgccgccgccgcccac 19749259 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 tctcctcctactcctcctctcccc 97 ||||||||| |||||||||||||| Sbjct: 15675072 tctcctcctcctcctcctctcccc 15675049 Score = 40.1 bits (20), Expect = 2.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 86 cctcctctccccgccgccgccgcccccc 113 ||||||| ||||||||||||||| |||| Sbjct: 13297818 cctcctccccccgccgccgccgctcccc 13297791
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.16 Identities = 25/26 (96%) Strand = Plus / Plus Query: 68 ccgccgtctcctcctactcctcctct 93 ||||||||||||||| |||||||||| Sbjct: 16266696 ccgccgtctcctcctcctcctcctct 16266721 Score = 40.1 bits (20), Expect = 2.6 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Minus Query: 74 tctcctcctactcctcctctccccgccgccgccgcc 109 ||||||||| ||||||||| | |||||||||||||| Sbjct: 24109126 tctcctcctcctcctcctc-cgccgccgccgccgcc 24109092 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 tctcctcctactcctcctctcccc 97 ||||||||| |||||||||||||| Sbjct: 19441063 tctcctcctcctcctcctctcccc 19441086
>emb|AL731591.3|OSJN00240 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039C07, complete sequence Length = 166410 Score = 44.1 bits (22), Expect = 0.16 Identities = 38/42 (90%), Gaps = 1/42 (2%) Strand = Plus / Plus Query: 68 ccgccgtctcctcctactcctcctctccccgccgccgccgcc 109 ||||| ||||||||| | |||||| ||||||||||||||||| Sbjct: 74585 ccgccttctcctcctccccctcct-tccccgccgccgccgcc 74625
>gb|AC122240.4| Mus musculus BAC clone RP23-145L9 from 6, complete sequence Length = 211740 Score = 44.1 bits (22), Expect = 0.16 Identities = 32/34 (94%), Gaps = 1/34 (2%) Strand = Plus / Minus Query: 77 cctcctactcctcctc-tccccgccgccgccgcc 109 |||||| ||||||||| ||||||||||||||||| Sbjct: 125279 cctcctcctcctcctcctccccgccgccgccgcc 125246 Score = 40.1 bits (20), Expect = 2.6 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Minus Query: 75 ctcctcctactcctcctctcc-ccgccgccgccgcc 109 |||||||| ||||||||| || |||||||||||||| Sbjct: 125278 ctcctcctcctcctcctccccgccgccgccgccgcc 125243
>ref|NM_102719.3| Arabidopsis thaliana unknown protein AT1G29790 mRNA, complete cds Length = 1598 Score = 42.1 bits (21), Expect = 0.65 Identities = 24/25 (96%) Strand = Plus / Plus Query: 68 ccgccgtctcctcctactcctcctc 92 ||||||||||||||| ||||||||| Sbjct: 294 ccgccgtctcctcctcctcctcctc 318
>gb|AC108759.2| Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone OSJNBa0072P02, complete sequence Length = 157488 Score = 42.1 bits (21), Expect = 0.65 Identities = 24/25 (96%) Strand = Plus / Plus Query: 68 ccgccgtctcctcctactcctcctc 92 ||||||||||||||| ||||||||| Sbjct: 115863 ccgccgtctcctcctcctcctcctc 115887
>ref|NM_188643.1| Oryza sativa (japonica cultivar-group), Ozsa8246 predicted mRNA Length = 1074 Score = 42.1 bits (21), Expect = 0.65 Identities = 24/25 (96%) Strand = Plus / Minus Query: 87 ctcctctccccgccgccgccgcccc 111 |||||| |||||||||||||||||| Sbjct: 243 ctcctccccccgccgccgccgcccc 219
>gb|AC160986.5| Mus musculus BAC clone RP23-258K21 from chromosome 6, complete sequence Length = 209886 Score = 42.1 bits (21), Expect = 0.65 Identities = 24/25 (96%) Strand = Plus / Plus Query: 75 ctcctcctactcctcctctccccgc 99 |||||||| |||||||||||||||| Sbjct: 51019 ctcctcctcctcctcctctccccgc 51043
>ref|XM_481319.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2421 Score = 42.1 bits (21), Expect = 0.65 Identities = 31/33 (93%), Gaps = 1/33 (3%) Strand = Plus / Plus Query: 77 cctcctactcctcctctccccgccgccgccgcc 109 |||||| ||||||||| |||||||||||||||| Sbjct: 21 cctcctcctcctcctc-ccccgccgccgccgcc 52
>ref|XM_483424.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3428 Score = 42.1 bits (21), Expect = 0.65 Identities = 30/33 (90%) Strand = Plus / Minus Query: 74 tctcctcctactcctcctctccccgccgccgcc 106 ||||||||| ||||||||| |||||||||||| Sbjct: 360 tctcctcctcctcctcctcctcccgccgccgcc 328
>ref|NM_185087.1| Oryza sativa (japonica cultivar-group), mRNA Length = 783 Score = 42.1 bits (21), Expect = 0.65 Identities = 24/25 (96%) Strand = Plus / Minus Query: 85 tcctcctctccccgccgccgccgcc 109 |||||||| |||||||||||||||| Sbjct: 448 tcctcctccccccgccgccgccgcc 424
>gb|DQ216325.1| Taeniopygia guttata clone 0061P0017H11 ARM-1 protein variant 5-like mRNA, complete sequence Length = 1413 Score = 42.1 bits (21), Expect = 0.65 Identities = 34/37 (91%), Gaps = 1/37 (2%) Strand = Plus / Minus Query: 75 ctcctcctactcctcctctccccgccgccgccgcccc 111 |||||||| ||||||||| | |||||||||||||||| Sbjct: 47 ctcctcctcctcctcctc-cgccgccgccgccgcccc 12
>ref|NM_197602.1| Oryza sativa (japonica cultivar-group) putative glutathione S-transferase (OSJNBb0015I11.25), mRNA Length = 1206 Score = 42.1 bits (21), Expect = 0.65 Identities = 34/37 (91%), Gaps = 1/37 (2%) Strand = Plus / Minus Query: 74 tctcctcctactcctcctctc-cccgccgccgccgcc 109 ||||||||| ||||||||||| || |||||||||||| Sbjct: 1001 tctcctcctcctcctcctctcgccggccgccgccgcc 965
>ref|NM_192724.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 4353 Score = 42.1 bits (21), Expect = 0.65 Identities = 24/25 (96%) Strand = Plus / Minus Query: 86 cctcctctccccgccgccgccgccc 110 ||||||| ||||||||||||||||| Sbjct: 258 cctcctccccccgccgccgccgccc 234
>ref|NM_193533.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 501 Score = 42.1 bits (21), Expect = 0.65 Identities = 31/33 (93%), Gaps = 1/33 (3%) Strand = Plus / Plus Query: 78 ctcctactcctcct-ctccccgccgccgccgcc 109 |||||||||||||| ||||||||||||| |||| Sbjct: 405 ctcctactcctcctcctccccgccgccgacgcc 437
>ref|XM_463744.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1782 Score = 42.1 bits (21), Expect = 0.65 Identities = 21/21 (100%) Strand = Plus / Minus Query: 92 ctccccgccgccgccgccccc 112 ||||||||||||||||||||| Sbjct: 90 ctccccgccgccgccgccccc 70
>ref|XM_472244.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1152 Score = 42.1 bits (21), Expect = 0.65 Identities = 30/33 (90%) Strand = Plus / Minus Query: 77 cctcctactcctcctctccccgccgccgccgcc 109 |||||| ||||||||||| |||| ||||||||| Sbjct: 926 cctcctcctcctcctctcgccgcggccgccgcc 894
>gb|BT018915.1| Zea mays clone EL01T0403H03.d mRNA sequence Length = 1155 Score = 42.1 bits (21), Expect = 0.65 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 ccccgccgccgccgcccccca 114 ||||||||||||||||||||| Sbjct: 910 ccccgccgccgccgcccccca 890
>gb|AC135927.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0683B02, complete sequence Length = 146435 Score = 42.1 bits (21), Expect = 0.65 Identities = 21/21 (100%) Strand = Plus / Plus Query: 95 cccgccgccgccgccccccac 115 ||||||||||||||||||||| Sbjct: 124564 cccgccgccgccgccccccac 124584
>gb|AC137618.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0090H02, complete sequence Length = 135231 Score = 42.1 bits (21), Expect = 0.65 Identities = 21/21 (100%) Strand = Plus / Plus Query: 95 cccgccgccgccgccccccac 115 ||||||||||||||||||||| Sbjct: 5861 cccgccgccgccgccccccac 5881
>gb|AC091246.8| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0002I03 map E1419S, complete sequence Length = 150945 Score = 42.1 bits (21), Expect = 0.65 Identities = 24/25 (96%) Strand = Plus / Plus Query: 86 cctcctctccccgccgccgccgccc 110 |||||||||| |||||||||||||| Sbjct: 68211 cctcctctcctcgccgccgccgccc 68235
>gb|AC097174.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1111_A10, complete sequence Length = 155106 Score = 42.1 bits (21), Expect = 0.65 Identities = 37/41 (90%), Gaps = 1/41 (2%) Strand = Plus / Minus Query: 68 ccgccgtctcctcctactcctcctctccccgccgccgccgc 108 |||||||||||||||||| | | ||||||||||||||||| Sbjct: 135768 ccgccgtctcctcctactgc-gcgctccccgccgccgccgc 135729
>gb|AC107206.4| Oryza sativa chromosome 3 BAC OSJNBa0063J18 genomic sequence, complete sequence Length = 154558 Score = 42.1 bits (21), Expect = 0.65 Identities = 21/21 (100%) Strand = Plus / Minus Query: 89 cctctccccgccgccgccgcc 109 ||||||||||||||||||||| Sbjct: 86246 cctctccccgccgccgccgcc 86226
>ref|XM_322808.1| Neurospora crassa OR74A predicted protein (NCU03551.1) partial mRNA Length = 3459 Score = 42.1 bits (21), Expect = 0.65 Identities = 30/33 (90%) Strand = Plus / Minus Query: 78 ctcctactcctcctctccccgccgccgccgccc 110 ||||||||||| ||||||||||||||| |||| Sbjct: 2899 ctcctactccttttctccccgccgccgctgccc 2867
>ref|XM_950697.1| Neurospora crassa OR74A hypothetical protein (NCU03551.1) partial mRNA Length = 3459 Score = 42.1 bits (21), Expect = 0.65 Identities = 30/33 (90%) Strand = Plus / Minus Query: 78 ctcctactcctcctctccccgccgccgccgccc 110 ||||||||||| ||||||||||||||| |||| Sbjct: 2899 ctcctactccttttctccccgccgccgctgccc 2867
>ref|NM_018814.3| Mus musculus pecanex homolog (Drosophila) (Pcnx), mRNA Length = 12139 Score = 42.1 bits (21), Expect = 0.65 Identities = 24/25 (96%) Strand = Plus / Plus Query: 68 ccgccgtctcctcctactcctcctc 92 ||||||||||||||| ||||||||| Sbjct: 168 ccgccgtctcctcctcctcctcctc 192
>gb|AC131119.3| Mus musculus BAC clone RP24-511O3 from chromosome 10, complete sequence Length = 154356 Score = 42.1 bits (21), Expect = 0.65 Identities = 24/25 (96%) Strand = Plus / Plus Query: 68 ccgccgtctcctcctactcctcctc 92 ||||||||||||||| ||||||||| Sbjct: 3217 ccgccgtctcctcctcctcctcctc 3241
>ref|NM_001009880.1| Homo sapiens chromosome 22 open reading frame 9 (C22orf9), transcript variant 2, mRNA Length = 6215 Score = 42.1 bits (21), Expect = 0.65 Identities = 21/21 (100%) Strand = Plus / Plus Query: 92 ctccccgccgccgccgccccc 112 ||||||||||||||||||||| Sbjct: 1 ctccccgccgccgccgccccc 21
>gb|AY812358.1| Schistosoma japonicum SJCHGC02998 protein mRNA, partial cds Length = 576 Score = 42.1 bits (21), Expect = 0.65 Identities = 27/29 (93%) Strand = Plus / Plus Query: 63 cgccaccgccgtctcctcctactcctcct 91 ||||||||||| |||||||| |||||||| Sbjct: 124 cgccaccgccgcctcctcctcctcctcct 152
>gb|AC121366.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0111K12, complete sequence Length = 127901 Score = 42.1 bits (21), Expect = 0.65 Identities = 21/21 (100%) Strand = Plus / Plus Query: 95 cccgccgccgccgccccccac 115 ||||||||||||||||||||| Sbjct: 52408 cccgccgccgccgccccccac 52428
>ref|XM_851091.1| PREDICTED: Canis familiaris similar to zinc finger protein 312, transcript variant 4 (LOC476568), mRNA Length = 2122 Score = 42.1 bits (21), Expect = 0.65 Identities = 44/49 (89%), Gaps = 2/49 (4%) Strand = Plus / Minus Query: 63 cgccaccgccgtctcctcctactcctcctc-tcc-ccgccgccgccgcc 109 |||| |||||| |||||||| ||||||||| ||| |||||||||||||| Sbjct: 673 cgccgccgccgcctcctcctcctcctcctcctccaccgccgccgccgcc 625
>emb|CR956408.5| Pig DNA sequence from clone CH242-34K8 on chromosome 17, complete sequence Length = 30411 Score = 42.1 bits (21), Expect = 0.65 Identities = 24/25 (96%) Strand = Plus / Minus Query: 75 ctcctcctactcctcctctccccgc 99 |||||||| |||||||||||||||| Sbjct: 26867 ctcctcctcctcctcctctccccgc 26843
>gb|AC102934.11| Mus musculus chromosome 3, clone RP24-209C11, complete sequence Length = 172970 Score = 42.1 bits (21), Expect = 0.65 Identities = 21/21 (100%) Strand = Plus / Plus Query: 77 cctcctactcctcctctcccc 97 ||||||||||||||||||||| Sbjct: 61172 cctcctactcctcctctcccc 61192
>emb|AM039889.1| Oryza sativa (japonica cultivar-group) mRNA for 2-Cys peroxiredoxin (bas1 gene) Length = 786 Score = 42.1 bits (21), Expect = 0.65 Identities = 24/25 (96%) Strand = Plus / Plus Query: 63 cgccaccgccgtctcctcctactcc 87 |||||||||||||||||||| |||| Sbjct: 24 cgccaccgccgtctcctcctcctcc 48
>emb|AL449263.6| Human DNA sequence from clone RP3-353C17 on chromosome 20, complete sequence Length = 31445 Score = 42.1 bits (21), Expect = 0.65 Identities = 24/25 (96%) Strand = Plus / Minus Query: 75 ctcctcctactcctcctctccccgc 99 |||||||| |||||||||||||||| Sbjct: 22870 ctcctcctcctcctcctctccccgc 22846
>emb|AL121902.13|HSBA80K6 Human DNA sequence from clone RP11-80K6 on chromosome 20 Contains a novel gene, the RPL36P1 gene for ribosomal protein L36 pseudogene 1, the 5' end of the gene for a novel protein (FLJ33887) and a CpG island, complete sequence Length = 170740 Score = 42.1 bits (21), Expect = 0.65 Identities = 24/25 (96%) Strand = Plus / Minus Query: 75 ctcctcctactcctcctctccccgc 99 |||||||| |||||||||||||||| Sbjct: 123450 ctcctcctcctcctcctctccccgc 123426
>emb|AL008718.23|HS268H5 Human DNA sequence from clone CTA-268H5 on chromosome 22q13.2-13.3, complete sequence Length = 188833 Score = 42.1 bits (21), Expect = 0.65 Identities = 21/21 (100%) Strand = Plus / Minus Query: 92 ctccccgccgccgccgccccc 112 ||||||||||||||||||||| Sbjct: 62427 ctccccgccgccgccgccccc 62407
>gb|AC118674.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0093J20, from chromosome 3, complete sequence Length = 148635 Score = 42.1 bits (21), Expect = 0.65 Identities = 21/21 (100%) Strand = Plus / Plus Query: 92 ctccccgccgccgccgccccc 112 ||||||||||||||||||||| Sbjct: 46398 ctccccgccgccgccgccccc 46418
>gb|AC133339.3| Oryza sativa chromosome 3 BAC OSJNBa0078D06 genomic sequence, complete sequence Length = 164236 Score = 42.1 bits (21), Expect = 0.65 Identities = 24/25 (96%) Strand = Plus / Minus Query: 85 tcctcctctccccgccgccgccgcc 109 |||||||| |||||||||||||||| Sbjct: 59585 tcctcctccccccgccgccgccgcc 59561
>emb|AL669986.1|NCB7N14 Neurospora crassa DNA linkage group II BAC clone B7N14 Length = 107947 Score = 42.1 bits (21), Expect = 0.65 Identities = 30/33 (90%) Strand = Plus / Minus Query: 78 ctcctactcctcctctccccgccgccgccgccc 110 ||||||||||| ||||||||||||||| |||| Sbjct: 62859 ctcctactccttttctccccgccgccgctgccc 62827
>gb|BT008461.1| Arabidopsis thaliana At1g29790 gene, complete cds Length = 1137 Score = 42.1 bits (21), Expect = 0.65 Identities = 24/25 (96%) Strand = Plus / Plus Query: 68 ccgccgtctcctcctactcctcctc 92 ||||||||||||||| ||||||||| Sbjct: 245 ccgccgtctcctcctcctcctcctc 269
>gb|AC093920.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1725_E07, complete sequence Length = 87244 Score = 42.1 bits (21), Expect = 0.65 Identities = 37/41 (90%), Gaps = 1/41 (2%) Strand = Plus / Minus Query: 68 ccgccgtctcctcctactcctcctctccccgccgccgccgc 108 |||||||||||||||||| | | ||||||||||||||||| Sbjct: 36547 ccgccgtctcctcctactgc-gcgctccccgccgccgccgc 36508
>gb|AC092562.4| Papio hamadryas BAC RP41-285I13 (Rosewell Park Cancer Institute BAC Library) complete sequence Length = 183586 Score = 42.1 bits (21), Expect = 0.65 Identities = 24/25 (96%) Strand = Plus / Minus Query: 86 cctcctctccccgccgccgccgccc 110 ||||||| ||||||||||||||||| Sbjct: 56880 cctcctcaccccgccgccgccgccc 56856
>gb|AY093204.1| Arabidopsis thaliana unknown protein (At1g29790) mRNA, complete cds Length = 1538 Score = 42.1 bits (21), Expect = 0.65 Identities = 24/25 (96%) Strand = Plus / Plus Query: 68 ccgccgtctcctcctactcctcctc 92 ||||||||||||||| ||||||||| Sbjct: 294 ccgccgtctcctcctcctcctcctc 318
>dbj|AB108187.1| Phleum pratense DNA, SSR, microsatellite A09-A06 Length = 533 Score = 42.1 bits (21), Expect = 0.65 Identities = 21/21 (100%) Strand = Plus / Minus Query: 76 tcctcctactcctcctctccc 96 ||||||||||||||||||||| Sbjct: 326 tcctcctactcctcctctccc 306
>gb|AC110800.4| Homo sapiens BAC clone RP11-703C10 from 4, complete sequence Length = 112014 Score = 42.1 bits (21), Expect = 0.65 Identities = 24/25 (96%) Strand = Plus / Plus Query: 75 ctcctcctactcctcctctccccgc 99 |||||||| |||||||||||||||| Sbjct: 51357 ctcctcctcctcctcctctccccgc 51381
>gb|AC175203.2| Sporobolomyces roseus clone JGIBAIF-5E21, complete sequence Length = 35046 Score = 42.1 bits (21), Expect = 0.65 Identities = 24/25 (96%) Strand = Plus / Minus Query: 75 ctcctcctactcctcctctccccgc 99 |||||||| |||||||||||||||| Sbjct: 14133 ctcctcctcctcctcctctccccgc 14109
>gb|AC051633.7| Oryza sativa chromosome 10 BAC OSJNBb0015I11 genomic sequence, complete sequence Length = 138824 Score = 42.1 bits (21), Expect = 0.65 Identities = 34/37 (91%), Gaps = 1/37 (2%) Strand = Plus / Plus Query: 74 tctcctcctactcctcctctc-cccgccgccgccgcc 109 ||||||||| ||||||||||| || |||||||||||| Sbjct: 114080 tctcctcctcctcctcctctcgccggccgccgccgcc 114116
>gb|AC124595.4| Mus musculus BAC clone RP23-18J1 from chromosome 12, complete sequence Length = 210781 Score = 42.1 bits (21), Expect = 0.65 Identities = 24/25 (96%) Strand = Plus / Minus Query: 68 ccgccgtctcctcctactcctcctc 92 ||||||||||||||| ||||||||| Sbjct: 49645 ccgccgtctcctcctcctcctcctc 49621
>gb|AC134241.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0085F02, complete sequence Length = 128535 Score = 42.1 bits (21), Expect = 0.65 Identities = 24/25 (96%) Strand = Plus / Minus Query: 84 ctcctcctctccccgccgccgccgc 108 ||||||||| ||||||||||||||| Sbjct: 82481 ctcctcctccccccgccgccgccgc 82457
>tpg|BK001015.1| TPA: TPA_exp: Oryza sativa (japonica cultivar-group) isolate P0410E03.4 PDR1 ABC transporter (pdr1) gene, complete cds Length = 8375 Score = 42.1 bits (21), Expect = 0.65 Identities = 24/25 (96%) Strand = Plus / Minus Query: 86 cctcctctccccgccgccgccgccc 110 ||||||| ||||||||||||||||| Sbjct: 282 cctcctccccccgccgccgccgccc 258
>emb|AL113647.1|CNS01B13 Botrytis cinerea strain T4 cDNA library Length = 1020 Score = 42.1 bits (21), Expect = 0.65 Identities = 21/21 (100%) Strand = Plus / Plus Query: 77 cctcctactcctcctctcccc 97 ||||||||||||||||||||| Sbjct: 377 cctcctactcctcctctcccc 397
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 0.65 Identities = 33/37 (89%) Strand = Plus / Minus Query: 86 cctcctctccccgccgccgccgccccccacatggccg 122 |||||||||||| || |||||||| || ||||||||| Sbjct: 3958782 cctcctctccccacctccgccgccgccgacatggccg 3958746 Score = 42.1 bits (21), Expect = 0.65 Identities = 21/21 (100%) Strand = Plus / Plus Query: 89 cctctccccgccgccgccgcc 109 ||||||||||||||||||||| Sbjct: 3936685 cctctccccgccgccgccgcc 3936705 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 86 cctcctctccccgccgccgccgcc 109 ||||||| |||||||||||||||| Sbjct: 25873498 cctcctccccccgccgccgccgcc 25873521 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 86 cctcctctccccgccgccgccgcc 109 ||||||| |||||||||||||||| Sbjct: 24758069 cctcctccccccgccgccgccgcc 24758092
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 0.65 Identities = 21/21 (100%) Strand = Plus / Plus Query: 95 cccgccgccgccgccccccac 115 ||||||||||||||||||||| Sbjct: 17378511 cccgccgccgccgccccccac 17378531 Score = 42.1 bits (21), Expect = 0.65 Identities = 37/41 (90%), Gaps = 1/41 (2%) Strand = Plus / Minus Query: 68 ccgccgtctcctcctactcctcctctccccgccgccgccgc 108 |||||||||||||||||| | | ||||||||||||||||| Sbjct: 5221265 ccgccgtctcctcctactgc-gcgctccccgccgccgccgc 5221226 Score = 40.1 bits (20), Expect = 2.6 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 77 cctcctactcctcctc-tccccgccgccgccg 107 |||||| ||||||||| ||||||||||||||| Sbjct: 25066510 cctcctcctcctcctcctccccgccgccgccg 25066479 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 75 ctcctcctactcctcctctccccg 98 |||||||| ||||||||||||||| Sbjct: 21086907 ctcctcctcctcctcctctccccg 21086884 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 tcctctccccgccgccgccg 107 |||||||||||||||||||| Sbjct: 17536604 tcctctccccgccgccgccg 17536585 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 69 cgccgtctcctcctactcctcctc 92 |||||||||||||| ||||||||| Sbjct: 16650780 cgccgtctcctcctcctcctcctc 16650803 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 92 ctccccgccgccgccgccccccac 115 |||||||||||||||||| ||||| Sbjct: 3230754 ctccccgccgccgccgccgcccac 3230731 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 cctctccccgccgccgccgc 108 |||||||||||||||||||| Sbjct: 3137020 cctctccccgccgccgccgc 3137001 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 ctctccccgccgccgccgcc 109 |||||||||||||||||||| Sbjct: 2314775 ctctccccgccgccgccgcc 2314794
>emb|AL662977.3|OSJN00176 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072D21, complete sequence Length = 160456 Score = 42.1 bits (21), Expect = 0.65 Identities = 30/33 (90%) Strand = Plus / Minus Query: 77 cctcctactcctcctctccccgccgccgccgcc 109 |||||| ||||||||||| |||| ||||||||| Sbjct: 81495 cctcctcctcctcctctcgccgcggccgccgcc 81463
>emb|BX816768.1|CNS0ABPO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH67ZE07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1491 Score = 42.1 bits (21), Expect = 0.65 Identities = 24/25 (96%) Strand = Plus / Plus Query: 68 ccgccgtctcctcctactcctcctc 92 ||||||||||||||| ||||||||| Sbjct: 284 ccgccgtctcctcctcctcctcctc 308
>emb|BX814866.1|CNS0AAH3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS13ZA01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1525 Score = 42.1 bits (21), Expect = 0.65 Identities = 24/25 (96%) Strand = Plus / Plus Query: 68 ccgccgtctcctcctactcctcctc 92 ||||||||||||||| ||||||||| Sbjct: 284 ccgccgtctcctcctcctcctcctc 308
>dbj|D63516.1|HUIEG1B Humicola grisea var. thermoidea eg-1 gene for cellulase (endoglucanase), exon1-2, complete cds Length = 2201 Score = 42.1 bits (21), Expect = 0.65 Identities = 24/25 (96%) Strand = Plus / Plus Query: 68 ccgccgtctcctcctactcctcctc 92 ||||||||||||||| ||||||||| Sbjct: 471 ccgccgtctcctcctcctcctcctc 495
>gb|AC126259.4| Mus musculus BAC clone RP23-330F19 from chromosome 6, complete sequence Length = 257100 Score = 42.1 bits (21), Expect = 0.65 Identities = 24/25 (96%) Strand = Plus / Minus Query: 75 ctcctcctactcctcctctccccgc 99 |||||||| |||||||||||||||| Sbjct: 112038 ctcctcctcctcctcctctccccgc 112014
>gb|AC121491.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0050D18, complete sequence Length = 126350 Score = 42.1 bits (21), Expect = 0.65 Identities = 24/25 (96%) Strand = Plus / Plus Query: 87 ctcctctccccgccgccgccgcccc 111 |||||||| |||||||||||||||| Sbjct: 62480 ctcctctcgccgccgccgccgcccc 62504
>dbj|AP003735.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1147A04 Length = 150053 Score = 42.1 bits (21), Expect = 0.65 Identities = 21/21 (100%) Strand = Plus / Plus Query: 92 ctccccgccgccgccgccccc 112 ||||||||||||||||||||| Sbjct: 116173 ctccccgccgccgccgccccc 116193
>dbj|AP003267.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0496H05 Length = 147817 Score = 42.1 bits (21), Expect = 0.65 Identities = 31/33 (93%), Gaps = 1/33 (3%) Strand = Plus / Minus Query: 78 ctcctactcctcct-ctccccgccgccgccgcc 109 |||||||||||||| ||||||||||||| |||| Sbjct: 109230 ctcctactcctcctcctccccgccgccgacgcc 109198
>dbj|AP002844.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0410E03 Length = 164839 Score = 42.1 bits (21), Expect = 0.65 Identities = 24/25 (96%) Strand = Plus / Plus Query: 86 cctcctctccccgccgccgccgccc 110 ||||||| ||||||||||||||||| Sbjct: 27570 cctcctccccccgccgccgccgccc 27594
>gb|AC015978.4|AC015978 Homo sapiens BAC clone RP11-529I21 from Y, complete sequence Length = 178780 Score = 42.1 bits (21), Expect = 0.65 Identities = 21/21 (100%) Strand = Plus / Minus Query: 74 tctcctcctactcctcctctc 94 ||||||||||||||||||||| Sbjct: 158865 tctcctcctactcctcctctc 158845
>gb|AC007241.3|AC007241 Homo sapiens BAC clone RP11-157F24 from Y, complete sequence Length = 161868 Score = 42.1 bits (21), Expect = 0.65 Identities = 21/21 (100%) Strand = Plus / Plus Query: 74 tctcctcctactcctcctctc 94 ||||||||||||||||||||| Sbjct: 76147 tctcctcctactcctcctctc 76167
>gb|AC133778.4| Oryza sativa chromosome 3 BAC OSJNBb0027B08 genomic sequence, complete sequence Length = 129302 Score = 42.1 bits (21), Expect = 0.65 Identities = 24/25 (96%) Strand = Plus / Plus Query: 85 tcctcctctccccgccgccgccgcc 109 |||||||| |||||||||||||||| Sbjct: 41465 tcctcctccccccgccgccgccgcc 41489
>gb|AC008030.4|AC008030 Arabidopsis thaliana chromosome I BAC F1N18 genomic sequence, complete sequence Length = 101075 Score = 42.1 bits (21), Expect = 0.65 Identities = 24/25 (96%) Strand = Plus / Minus Query: 68 ccgccgtctcctcctactcctcctc 92 ||||||||||||||| ||||||||| Sbjct: 64715 ccgccgtctcctcctcctcctcctc 64691
>gb|AC009404.5| Homo sapiens BAC clone RP11-28H22 from 2, complete sequence Length = 112883 Score = 42.1 bits (21), Expect = 0.65 Identities = 21/21 (100%) Strand = Plus / Plus Query: 89 cctctccccgccgccgccgcc 109 ||||||||||||||||||||| Sbjct: 53435 cctctccccgccgccgccgcc 53455
>dbj|AP002481.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0702F03 Length = 141111 Score = 42.1 bits (21), Expect = 0.65 Identities = 24/25 (96%) Strand = Plus / Plus Query: 87 ctcctctccccgccgccgccgcccc 111 |||||| |||||||||||||||||| Sbjct: 60460 ctcctccccccgccgccgccgcccc 60484
>dbj|AP005383.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1034_C08 Length = 154441 Score = 42.1 bits (21), Expect = 0.65 Identities = 31/33 (93%), Gaps = 1/33 (3%) Strand = Plus / Minus Query: 77 cctcctactcctcctctccccgccgccgccgcc 109 |||||| ||||||||| |||||||||||||||| Sbjct: 101811 cctcctcctcctcctc-ccccgccgccgccgcc 101780
>dbj|AP004753.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0508B05 Length = 166165 Score = 42.1 bits (21), Expect = 0.65 Identities = 24/25 (96%) Strand = Plus / Plus Query: 63 cgccaccgccgtctcctcctactcc 87 |||||||||||||||||||| |||| Sbjct: 79170 cgccaccgccgtctcctcctcctcc 79194
>dbj|AP004694.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0467G09 Length = 158204 Score = 42.1 bits (21), Expect = 0.65 Identities = 31/33 (93%), Gaps = 1/33 (3%) Strand = Plus / Minus Query: 77 cctcctactcctcctctccccgccgccgccgcc 109 |||||| ||||||||| |||||||||||||||| Sbjct: 7948 cctcctcctcctcctc-ccccgccgccgccgcc 7917
>dbj|AP003075.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0468H06 Length = 155031 Score = 42.1 bits (21), Expect = 0.65 Identities = 31/33 (93%), Gaps = 1/33 (3%) Strand = Plus / Minus Query: 78 ctcctactcctcct-ctccccgccgccgccgcc 109 |||||||||||||| ||||||||||||| |||| Sbjct: 28678 ctcctactcctcctcctccccgccgccgacgcc 28646
>dbj|AP005720.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1123_B08 Length = 134028 Score = 42.1 bits (21), Expect = 0.65 Identities = 27/29 (93%) Strand = Plus / Plus Query: 83 actcctcctctccccgccgccgccgcccc 111 ||||||||||||| |||||||||| |||| Sbjct: 99804 actcctcctctcctcgccgccgcctcccc 99832
>dbj|AP005609.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0014M17 Length = 156778 Score = 42.1 bits (21), Expect = 0.65 Identities = 24/25 (96%) Strand = Plus / Plus Query: 63 cgccaccgccgtctcctcctactcc 87 |||||||||||||||||||| |||| Sbjct: 5690 cgccaccgccgtctcctcctcctcc 5714 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 86 cctcctctccccgccgccgccgcc 109 ||||||||| |||||||||||||| Sbjct: 129501 cctcctctctccgccgccgccgcc 129524
>dbj|AP005637.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0711A01 Length = 162400 Score = 42.1 bits (21), Expect = 0.65 Identities = 21/21 (100%) Strand = Plus / Minus Query: 100 cgccgccgccccccacatggc 120 ||||||||||||||||||||| Sbjct: 23311 cgccgccgccccccacatggc 23291
>gb|AY789596.1| Tripsacum dactyloides FL1 gene, partial cds Length = 934 Score = 42.1 bits (21), Expect = 0.65 Identities = 21/21 (100%) Strand = Plus / Minus Query: 89 cctctccccgccgccgccgcc 109 ||||||||||||||||||||| Sbjct: 837 cctctccccgccgccgccgcc 817
>dbj|AP003888.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1191_A10 Length = 140643 Score = 42.1 bits (21), Expect = 0.65 Identities = 30/33 (90%) Strand = Plus / Plus Query: 74 tctcctcctactcctcctctccccgccgccgcc 106 ||||||||| ||||||||| |||||||||||| Sbjct: 83954 tctcctcctcctcctcctcctcccgccgccgcc 83986
>dbj|AB103350.1| Oryza sativa (japonica cultivar-group) GST mRNA for glutathione S-transferase, complete cd Length = 1238 Score = 42.1 bits (21), Expect = 0.65 Identities = 34/37 (91%), Gaps = 1/37 (2%) Strand = Plus / Minus Query: 74 tctcctcctactcctcctctc-cccgccgccgccgcc 109 ||||||||| ||||||||||| || |||||||||||| Sbjct: 1001 tctcctcctcctcctcctctcgccggccgccgccgcc 965
>dbj|AK111493.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000B23, full insert sequence Length = 2596 Score = 42.1 bits (21), Expect = 0.65 Identities = 21/21 (100%) Strand = Plus / Minus Query: 92 ctccccgccgccgccgccccc 112 ||||||||||||||||||||| Sbjct: 164 ctccccgccgccgccgccccc 144
>dbj|AP005467.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1349_D05 Length = 174478 Score = 42.1 bits (21), Expect = 0.65 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 84 ctcctcctctcc-ccgccgccgccgcccc 111 |||||||||||| |||||||||||||||| Sbjct: 88025 ctcctcctctccgccgccgccgccgcccc 87997
>emb|AJ333155.1|HSA333155 Homo sapiens genomic sequence surrounding NotI site, clone NL1-FF18RS Length = 551 Score = 42.1 bits (21), Expect = 0.65 Identities = 21/21 (100%) Strand = Plus / Plus Query: 92 ctccccgccgccgccgccccc 112 ||||||||||||||||||||| Sbjct: 68 ctccccgccgccgccgccccc 88
>dbj|AK104703.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-D02, full insert sequence Length = 1061 Score = 42.1 bits (21), Expect = 0.65 Identities = 24/25 (96%) Strand = Plus / Plus Query: 63 cgccaccgccgtctcctcctactcc 87 |||||||||||||||||||| |||| Sbjct: 95 cgccaccgccgtctcctcctcctcc 119
>dbj|AK103114.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033119F13, full insert sequence Length = 1648 Score = 42.1 bits (21), Expect = 0.65 Identities = 24/25 (96%) Strand = Plus / Plus Query: 84 ctcctcctctccccgccgccgccgc 108 ||||||||| ||||||||||||||| Sbjct: 141 ctcctcctccccccgccgccgccgc 165
>dbj|AK099619.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013052P13, full insert sequence Length = 1978 Score = 42.1 bits (21), Expect = 0.65 Identities = 24/25 (96%) Strand = Plus / Plus Query: 86 cctcctctccccgccgccgccgccc 110 |||||||||| |||||||||||||| Sbjct: 27 cctcctctcctcgccgccgccgccc 51
>dbj|AK099201.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023122P03, full insert sequence Length = 1292 Score = 42.1 bits (21), Expect = 0.65 Identities = 33/37 (89%) Strand = Plus / Plus Query: 86 cctcctctccccgccgccgccgccccccacatggccg 122 |||||||||||| || |||||||| || ||||||||| Sbjct: 32 cctcctctccccacctccgccgccgccgacatggccg 68
>ref|NG_004636.1| Homo sapiens chromosome Y palindromes P4 and P5 (P4-P5@) on chromosome Y Length = 1351786 Score = 42.1 bits (21), Expect = 0.65 Identities = 21/21 (100%) Strand = Plus / Plus Query: 74 tctcctcctactcctcctctc 94 ||||||||||||||||||||| Sbjct: 800769 tctcctcctactcctcctctc 800789 Score = 42.1 bits (21), Expect = 0.65 Identities = 21/21 (100%) Strand = Plus / Minus Query: 74 tctcctcctactcctcctctc 94 ||||||||||||||||||||| Sbjct: 73048 tctcctcctactcctcctctc 73028
>dbj|AK071544.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023100D05, full insert sequence Length = 1901 Score = 42.1 bits (21), Expect = 0.65 Identities = 21/21 (100%) Strand = Plus / Plus Query: 89 cctctccccgccgccgccgcc 109 ||||||||||||||||||||| Sbjct: 81 cctctccccgccgccgccgcc 101
>dbj|AK066539.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013068N24, full insert sequence Length = 1777 Score = 42.1 bits (21), Expect = 0.65 Identities = 24/25 (96%) Strand = Plus / Plus Query: 68 ccgccgtctcctcctactcctcctc 92 ||||||||||||||| ||||||||| Sbjct: 123 ccgccgtctcctcctcctcctcctc 147
>dbj|AK069638.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023026J04, full insert sequence Length = 3431 Score = 42.1 bits (21), Expect = 0.65 Identities = 30/33 (90%) Strand = Plus / Minus Query: 74 tctcctcctactcctcctctccccgccgccgcc 106 ||||||||| ||||||||| |||||||||||| Sbjct: 361 tctcctcctcctcctcctcctcccgccgccgcc 329
>dbj|AK068919.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013170F14, full insert sequence Length = 1079 Score = 42.1 bits (21), Expect = 0.65 Identities = 24/25 (96%) Strand = Plus / Plus Query: 63 cgccaccgccgtctcctcctactcc 87 |||||||||||||||||||| |||| Sbjct: 96 cgccaccgccgtctcctcctcctcc 120
>dbj|AK066101.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013052O12, full insert sequence Length = 1978 Score = 42.1 bits (21), Expect = 0.65 Identities = 24/25 (96%) Strand = Plus / Plus Query: 86 cctcctctccccgccgccgccgccc 110 |||||||||| |||||||||||||| Sbjct: 27 cctcctctcctcgccgccgccgccc 51
>dbj|AK061231.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-A09, full insert sequence Length = 623 Score = 42.1 bits (21), Expect = 0.65 Identities = 37/41 (90%), Gaps = 1/41 (2%) Strand = Plus / Plus Query: 68 ccgccgtctcctcctactcctcctctccccgccgccgccgc 108 |||||||||||||||||| | | ||||||||||||||||| Sbjct: 100 ccgccgtctcctcctactgc-gcgctccccgccgccgccgc 139
>dbj|AK061107.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-B12, full insert sequence Length = 1302 Score = 42.1 bits (21), Expect = 0.65 Identities = 33/37 (89%) Strand = Plus / Plus Query: 86 cctcctctccccgccgccgccgccccccacatggccg 122 |||||||||||| || |||||||| || ||||||||| Sbjct: 42 cctcctctccccacctccgccgccgccgacatggccg 78
>dbj|AK060420.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-G05, full insert sequence Length = 723 Score = 42.1 bits (21), Expect = 0.65 Identities = 37/41 (90%), Gaps = 1/41 (2%) Strand = Plus / Plus Query: 68 ccgccgtctcctcctactcctcctctccccgccgccgccgc 108 |||||||||||||||||| | | ||||||||||||||||| Sbjct: 110 ccgccgtctcctcctactgc-gcgctccccgccgccgccgc 149
>dbj|AK058675.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-H07, full insert sequence Length = 629 Score = 42.1 bits (21), Expect = 0.65 Identities = 37/41 (90%), Gaps = 1/41 (2%) Strand = Plus / Plus Query: 68 ccgccgtctcctcctactcctcctctccccgccgccgccgc 108 |||||||||||||||||| | | ||||||||||||||||| Sbjct: 109 ccgccgtctcctcctactgc-gcgctccccgccgccgccgc 148
>dbj|AK058658.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-F10, full insert sequence Length = 1383 Score = 42.1 bits (21), Expect = 0.65 Identities = 37/41 (90%), Gaps = 1/41 (2%) Strand = Plus / Plus Query: 68 ccgccgtctcctcctactcctcctctccccgccgccgccgc 108 |||||||||||||||||| | | ||||||||||||||||| Sbjct: 820 ccgccgtctcctcctactgc-gcgctccccgccgccgccgc 859
>gb|DQ333389.1| Elk herpesvirus glycoprotein C gene, complete cds Length = 1619 Score = 42.1 bits (21), Expect = 0.65 Identities = 21/21 (100%) Strand = Plus / Plus Query: 92 ctccccgccgccgccgccccc 112 ||||||||||||||||||||| Sbjct: 126 ctccccgccgccgccgccccc 146
>emb|AJ535045.1|OSA535045 Oryza sativa (japonica cultivar-group) pdr10 gene for PDR-like ABC transporter, exons 1-21 Length = 8375 Score = 42.1 bits (21), Expect = 0.65 Identities = 24/25 (96%) Strand = Plus / Minus Query: 86 cctcctctccccgccgccgccgccc 110 ||||||| ||||||||||||||||| Sbjct: 282 cctcctccccccgccgccgccgccc 258
>gb|AC174452.2| Mus musculus BAC clone RP23-113E17 from chromosome 10, complete sequence Length = 229159 Score = 42.1 bits (21), Expect = 0.65 Identities = 24/25 (96%) Strand = Plus / Plus Query: 68 ccgccgtctcctcctactcctcctc 92 ||||||||||||||| ||||||||| Sbjct: 165397 ccgccgtctcctcctcctcctcctc 165421
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 0.65 Identities = 33/37 (89%) Strand = Plus / Minus Query: 86 cctcctctccccgccgccgccgccccccacatggccg 122 |||||||||||| || |||||||| || ||||||||| Sbjct: 3958756 cctcctctccccacctccgccgccgccgacatggccg 3958720 Score = 42.1 bits (21), Expect = 0.65 Identities = 21/21 (100%) Strand = Plus / Plus Query: 89 cctctccccgccgccgccgcc 109 ||||||||||||||||||||| Sbjct: 3936659 cctctccccgccgccgccgcc 3936679 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 86 cctcctctccccgccgccgccgcc 109 ||||||| |||||||||||||||| Sbjct: 25801674 cctcctccccccgccgccgccgcc 25801697 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 86 cctcctctccccgccgccgccgcc 109 ||||||| |||||||||||||||| Sbjct: 24686275 cctcctccccccgccgccgccgcc 24686298
>gb|AC168063.3| Mus musculus BAC clone RP23-197G3 from chromosome 17, complete sequence Length = 213263 Score = 42.1 bits (21), Expect = 0.65 Identities = 24/25 (96%) Strand = Plus / Minus Query: 75 ctcctcctactcctcctctccccgc 99 |||||||| |||||||||||||||| Sbjct: 180832 ctcctcctcctcctcctctccccgc 180808
>emb|AL732376.2|CNS08C8Z Oryza sativa chromosome 12, . BAC OSJNBa0086B10 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 152090 Score = 42.1 bits (21), Expect = 0.65 Identities = 33/37 (89%) Strand = Plus / Minus Query: 86 cctcctctccccgccgccgccgccccccacatggccg 122 |||||||||||| || |||||||| || ||||||||| Sbjct: 120758 cctcctctccccacctccgccgccgccgacatggccg 120722 Score = 42.1 bits (21), Expect = 0.65 Identities = 21/21 (100%) Strand = Plus / Plus Query: 89 cctctccccgccgccgccgcc 109 ||||||||||||||||||||| Sbjct: 98661 cctctccccgccgccgccgcc 98681
>dbj|AB065453.1| Homo sapiens gene for seven transmembrane helix receptor, isolate:CBRC7TM_16 Length = 44312 Score = 42.1 bits (21), Expect = 0.65 Identities = 21/21 (100%) Strand = Plus / Plus Query: 89 cctctccccgccgccgccgcc 109 ||||||||||||||||||||| Sbjct: 11836 cctctccccgccgccgccgcc 11856
>gb|AY308817.1| Canis familiaris homeobox D11 gene, partial sequence Length = 494 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 ccccgccgccgccgcccccc 113 |||||||||||||||||||| Sbjct: 164 ccccgccgccgccgcccccc 183
>gb|AC108429.11| Mus musculus chromosome 7, clone RP23-161B5, complete sequence Length = 186903 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 cctctccccgccgccgccgc 108 |||||||||||||||||||| Sbjct: 80703 cctctccccgccgccgccgc 80684
>gb|AC102735.9| Mus musculus chromosome 5, clone RP24-237I4, complete sequence Length = 167871 Score = 40.1 bits (20), Expect = 2.6 Identities = 32/36 (88%) Strand = Plus / Plus Query: 74 tctcctcctactcctcctctccccgccgccgccgcc 109 ||||||||| || ||||| || |||||||||||||| Sbjct: 152434 tctcctcctcctgctcctgtcgccgccgccgccgcc 152469
>ref|XM_550386.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1557 Score = 40.1 bits (20), Expect = 2.6 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 84 ctcctcctc-tccccgccgccgccgccc 110 ||||||||| |||||||||||||||||| Sbjct: 159 ctcctcctcctccccgccgccgccgccc 186
>ref|XM_550363.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3082 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 ccgccgccgccgccccccac 115 |||||||||||||||||||| Sbjct: 96 ccgccgccgccgccccccac 115
>ref|NM_185279.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 867 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 92 ctccccgccgccgccgccccccac 115 |||||||||||||||||| ||||| Sbjct: 27 ctccccgccgccgccgccgcccac 4
>ref|XM_483174.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2805 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 ctccccgccgccgccgcccc 111 |||||||||||||||||||| Sbjct: 362 ctccccgccgccgccgcccc 343
>ref|XM_480256.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2274 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 84 ctcctcctctccccgccgccgccg 107 ||||||| |||||||||||||||| Sbjct: 404 ctcctcccctccccgccgccgccg 381
>ref|XM_475683.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 714 Score = 40.1 bits (20), Expect = 2.6 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 77 cctcctactcctcctc-tccccgccgccgccg 107 |||||| ||||||||| ||||||||||||||| Sbjct: 514 cctcctcctcctcctcctccccgccgccgccg 483
>ref|XM_475582.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1335 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 ctctccccgccgccgccgcc 109 |||||||||||||||||||| Sbjct: 1247 ctctccccgccgccgccgcc 1228
>ref|XM_467402.1| Oryza sativa (japonica cultivar-group), mRNA Length = 759 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 86 cctcctctccccgccgccgccgcc 109 ||||||||| |||||||||||||| Sbjct: 264 cctcctctcgccgccgccgccgcc 287
>ref|XM_467050.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1887 Score = 40.1 bits (20), Expect = 2.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 61 ggcgccaccgccgtctcctcctactcctcctc 92 |||||||||||| |||||||| ||||||||| Sbjct: 707 ggcgccaccgcctcctcctcctcctcctcctc 676
>ref|XM_466009.1| Oryza sativa (japonica cultivar-group), mRNA Length = 453 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 ctccccgccgccgccgcccc 111 |||||||||||||||||||| Sbjct: 165 ctccccgccgccgccgcccc 146
>ref|NM_197414.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBb0028C01.35), mRNA Length = 870 Score = 40.1 bits (20), Expect = 2.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 84 ctcctcctctccccgccgccgccgccccccac 115 ||||||| ||||||||||||||||| ||||| Sbjct: 78 ctcctccagtccccgccgccgccgccgcccac 109
>ref|XM_527244.1| PREDICTED: Pan troglodytes similar to SRY (sex determining region Y)-box 4; SRY-related HMG-box gene 4; ecotropic viral integration site 16 (LOC471866), mRNA Length = 1425 Score = 40.1 bits (20), Expect = 2.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 95 cccgccgccgccgccccccacatggccg 122 ||||||||||||||| ||| |||||||| Sbjct: 519 cccgccgccgccgccgcccccatggccg 492
>ref|NM_196409.1| Oryza sativa (japonica cultivar-group) putative homeotic protein (OSJNBb0044I14.6), mRNA Length = 1056 Score = 40.1 bits (20), Expect = 2.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 86 cctcctctccccgccgccgccgcccccc 113 ||||||| ||||||||||||||| |||| Sbjct: 620 cctcctccccccgccgccgccgctcccc 593
>gb|AC167168.5| Mus musculus chromosome 1, clone RP23-100P14, complete sequence Length = 204256 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tctcctcctactcctcctct 93 |||||||||||||||||||| Sbjct: 96563 tctcctcctactcctcctct 96544
>ref|NM_190798.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 348 Score = 40.1 bits (20), Expect = 2.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 83 actcctcctctccccgccgccgccgccc 110 |||||||| ||| ||||||||||||||| Sbjct: 201 actcctccgctcgccgccgccgccgccc 174
>ref|NM_191394.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1908 Score = 40.1 bits (20), Expect = 2.6 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Minus Query: 75 ctcctcctactcctcctctccccgccgccgccgccc 110 |||||||| ||||||||| | ||||||||||||||| Sbjct: 205 ctcctcctcctcctcctc-ctccgccgccgccgccc 171
>ref|NM_204412.1| Gallus gallus achaete-scute complex-like 1(Drosophila) (ASCL1), mRNA Length = 1925 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 ccgtctcctcctactcctcc 90 |||||||||||||||||||| Sbjct: 826 ccgtctcctcctactcctcc 845
>ref|XM_468725.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1152 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 cctcctctccccgccgccgccgcc 109 ||||||||| |||||||||||||| Sbjct: 54 cctcctctcgccgccgccgccgcc 31
>ref|XM_469440.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2503 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 cctcctctccccgccgccgccgcc 109 ||||||| |||||||||||||||| Sbjct: 243 cctcctcaccccgccgccgccgcc 220
>ref|XM_469439.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2387 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 cctcctctccccgccgccgccgcc 109 ||||||| |||||||||||||||| Sbjct: 105 cctcctcaccccgccgccgccgcc 82
>ref|XM_470355.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2548 Score = 40.1 bits (20), Expect = 2.6 Identities = 37/40 (92%), Gaps = 2/40 (5%) Strand = Plus / Plus Query: 72 cgtctcctcctactcctcct-ctcc-ccgccgccgccgcc 109 ||||||||||| |||||||| |||| |||||||||||||| Sbjct: 18 cgtctcctcctcctcctcctcctcctccgccgccgccgcc 57
>ref|XM_479491.1| Oryza sativa (japonica cultivar-group), mRNA Length = 642 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 ctctccccgccgccgccgcc 109 |||||||||||||||||||| Sbjct: 332 ctctccccgccgccgccgcc 351
>ref|XM_478876.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1206 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 ctccccgccgccgccgcccc 111 |||||||||||||||||||| Sbjct: 89 ctccccgccgccgccgcccc 70
>ref|NM_186833.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1630 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 ctctccccgccgccgccgcc 109 |||||||||||||||||||| Sbjct: 128 ctctccccgccgccgccgcc 147
>ref|NM_003107.2| Homo sapiens SRY (sex determining region Y)-box 4 (SOX4), mRNA Length = 4912 Score = 40.1 bits (20), Expect = 2.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 95 cccgccgccgccgccccccacatggccg 122 ||||||||||||||| ||| |||||||| Sbjct: 1313 cccgccgccgccgccgcccccatggccg 1286
>ref|XM_471773.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1146 Score = 40.1 bits (20), Expect = 2.6 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 75 ctcctcctactcctcctctcc-ccgccgccgc 105 |||||||| |||||||||||| |||||||||| Sbjct: 40 ctcctcctcctcctcctctcctccgccgccgc 71
>gb|AC158976.14| Mus musculus chromosome 15, clone RP24-71M3, complete sequence Length = 182465 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 tctcctcctactcctcctctcccc 97 ||||||||| |||||||||||||| Sbjct: 86059 tctcctcctcctcctcctctcccc 86036
>gb|AC104281.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1537_B05, complete sequence Length = 129890 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 69 cgccgtctcctcctactcctcctc 92 |||||||||||||| ||||||||| Sbjct: 60396 cgccgtctcctcctcctcctcctc 60419
>gb|AC087551.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0431G05, complete sequence Length = 145044 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 92 ctccccgccgccgccgccccccac 115 |||||||||||||||||| ||||| Sbjct: 108471 ctccccgccgccgccgccgcccac 108448 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 cctctccccgccgccgccgc 108 |||||||||||||||||||| Sbjct: 14737 cctctccccgccgccgccgc 14718
>gb|AC093492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0059G01, complete sequence Length = 141661 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 cctctccccgccgccgccgc 108 |||||||||||||||||||| Sbjct: 124264 cctctccccgccgccgccgc 124245
>gb|AY023541.1| Oryza sativa microsatellite MRG5866 containing (TGG)X8, closest to marker C226A, genomic sequence Length = 224 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 ccgccgccgccgccccccac 115 |||||||||||||||||||| Sbjct: 52 ccgccgccgccgccccccac 33
>gb|AY023262.1| Oryza sativa microsatellite MRG5587 containing (GGC)X8, closest to marker C226A, genomic sequence Length = 224 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 ccgccgccgccgccccccac 115 |||||||||||||||||||| Sbjct: 114 ccgccgccgccgccccccac 95
>gb|AC091670.7| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1212_C08 map R2847, complete sequence Length = 100918 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 86 cctcctctccccgccgccgccgcc 109 ||||||| |||||||||||||||| Sbjct: 100437 cctcctcaccccgccgccgccgcc 100460
>gb|AC103396.8| Mus musculus chromosome 1, clone RP24-142I5, complete sequence Length = 183930 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 ctcctcctactcctcctctc 94 |||||||||||||||||||| Sbjct: 56633 ctcctcctactcctcctctc 56652
>gb|AC108224.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0038F07, complete sequence Length = 175703 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 tctcctcctactcctcctctcccc 97 ||||||||| |||||||||||||| Sbjct: 65 tctcctcctcctcctcctctcccc 88
>gb|AC108223.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0019A16, complete sequence Length = 175425 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 tctcctcctactcctcctctcccc 97 ||||||||| |||||||||||||| Sbjct: 150302 tctcctcctcctcctcctctcccc 150325
>gb|AC109832.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone P0038B07, complete sequence Length = 149697 Score = 40.1 bits (20), Expect = 2.6 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Minus Query: 74 tctcctcctactcctcctctccccgccgccgccgcc 109 ||||||||| ||||||||| | |||||||||||||| Sbjct: 133495 tctcctcctcctcctcctc-cgccgccgccgccgcc 133461
>ref|XM_363558.1| Magnaporthe grisea 70-15 hypothetical protein (MG01484.4) partial mRNA Length = 696 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 tctccccgccgccgccgccc 110 |||||||||||||||||||| Sbjct: 34 tctccccgccgccgccgccc 15
>ref|XM_418957.1| PREDICTED: Gallus gallus similar to Desmoplakin (DP) (250/210 kDa paraneoplastic pemphigus antigen) (LOC420869), mRNA Length = 6720 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 96 ccgccgccgccgccccccacatgg 119 ||||||||||||||| |||||||| Sbjct: 137 ccgccgccgccgcccaccacatgg 114
>gb|AC128646.5| Oryza sativa chromosome 3 BAC OSJNBb0029I19 genomic sequence, complete sequence Length = 120254 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 84 ctcctcctctccccgccgccgccg 107 |||||||||| ||||||||||||| Sbjct: 71896 ctcctcctctgcccgccgccgccg 71873
>gb|AC113158.3| Mus musculus BAC clone RP23-101D11 from chromosome 9, complete sequence Length = 188085 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 ccccgccgccgccgcccccc 113 |||||||||||||||||||| Sbjct: 112894 ccccgccgccgccgcccccc 112913
>gb|AC108502.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1378_A04, complete sequence Length = 103458 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 75 ctcctcctactcctcctctccccg 98 |||||||| ||||||||||||||| Sbjct: 102285 ctcctcctcctcctcctctccccg 102262
>gb|BC072668.1| Homo sapiens SRY (sex determining region Y)-box 4, mRNA (cDNA clone MGC:71240 IMAGE:6584346), complete cds Length = 2107 Score = 40.1 bits (20), Expect = 2.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 95 cccgccgccgccgccccccacatggccg 122 ||||||||||||||| ||| |||||||| Sbjct: 1133 cccgccgccgccgccgcccccatggccg 1106
>gb|AC130601.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0108E17, complete sequence Length = 139829 Score = 40.1 bits (20), Expect = 2.6 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 77 cctcctactcctcctc-tccccgccgccgccg 107 |||||| ||||||||| ||||||||||||||| Sbjct: 135363 cctcctcctcctcctcctccccgccgccgccg 135332
>gb|AC105769.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1301_G07, complete sequence Length = 106166 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 75 ctcctcctactcctcctctccccg 98 |||||||| ||||||||||||||| Sbjct: 65772 ctcctcctcctcctcctctccccg 65749
>gb|AC108873.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1005_B11, complete sequence Length = 162772 Score = 40.1 bits (20), Expect = 2.6 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 77 cctcctactcctcctc-tccccgccgccgccg 107 |||||| ||||||||| ||||||||||||||| Sbjct: 9165 cctcctcctcctcctcctccccgccgccgccg 9134
>gb|AC104279.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1393_A07, complete sequence Length = 159932 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 tcctctccccgccgccgccg 107 |||||||||||||||||||| Sbjct: 66409 tcctctccccgccgccgccg 66390
>gb|DQ022070.1| Oryza sativa (japonica cultivar-group) sound-induced ring zinc finger gene, promoter region Length = 1200 Score = 40.1 bits (20), Expect = 2.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 83 actcctcctctccccgccgccgccgccc 110 |||||||| ||| ||||||||||||||| Sbjct: 297 actcctccgctcgccgccgccgccgccc 324
>ref|NM_031866.1| Homo sapiens frizzled homolog 8 (Drosophila) (FZD8), mRNA Length = 3195 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 ccccgccgccgccgcccccc 113 |||||||||||||||||||| Sbjct: 1956 ccccgccgccgccgcccccc 1937
>gb|DP000012.1| Macropus eugenii target 1 genomic scaffold Length = 1996640 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tctcctcctactcctcctct 93 |||||||||||||||||||| Sbjct: 1489983 tctcctcctactcctcctct 1489964
>gb|AC154330.2| Mus musculus BAC clone RP23-286H23 from chromosome 16, complete sequence Length = 203553 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 ctccccgccgccgccgcccc 111 |||||||||||||||||||| Sbjct: 155652 ctccccgccgccgccgcccc 155633
>ref|XM_847336.1| PREDICTED: Canis familiaris similar to Homeobox protein Hox-D11 (Hox-4F) (LOC609973), mRNA Length = 1456 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 ccccgccgccgccgcccccc 113 |||||||||||||||||||| Sbjct: 268 ccccgccgccgccgcccccc 249
>gb|AC133334.8| Oryza sativa chromosome 3 BAC OSJNBa0004L11 genomic sequence, complete sequence Length = 133889 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 cctcctctccccgccgccgccgcc 109 ||||||| |||||||||||||||| Sbjct: 60317 cctcctcaccccgccgccgccgcc 60294
>ref|XM_977217.1| PREDICTED: Mus musculus gene model 447, (NCBI) (LOC242997), mRNA Length = 3369 Score = 40.1 bits (20), Expect = 2.6 Identities = 32/36 (88%) Strand = Plus / Minus Query: 74 tctcctcctactcctcctctccccgccgccgccgcc 109 ||||||||| || ||||| || |||||||||||||| Sbjct: 515 tctcctcctcctgctcctgtcgccgccgccgccgcc 480
>ref|XM_850717.1| PREDICTED: Canis familiaris similar to Y45F10A.6b, transcript variant 4 (LOC476074), mRNA Length = 3528 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 tccccgccgccgccgccccc 112 |||||||||||||||||||| Sbjct: 3254 tccccgccgccgccgccccc 3235
>emb|CT009748.6| Mouse DNA sequence from clone RP23-120N6 on chromosome 9, complete sequence Length = 235839 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 tctcctcctactcctcctctcccc 97 ||||||||| |||||||||||||| Sbjct: 30887 tctcctcctcctcctcctctcccc 30864
>gb|AC118603.9| Mus musculus chromosome 16, clone RP24-79L6, complete sequence Length = 190432 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 tctcctcctactcctcctctcccc 97 |||| ||||||||||||||||||| Sbjct: 142377 tctcttcctactcctcctctcccc 142354
>gb|AC107635.16| Mus musculus chromosome 9, clone RP23-24C14, complete sequence Length = 214285 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 tctcctcctactcctcctctcccc 97 ||||||||| |||||||||||||| Sbjct: 64305 tctcctcctcctcctcctctcccc 64328
>gb|AC122815.3| Mus musculus BAC clone RP23-234O3 from chromosome 2, complete sequence Length = 176452 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 tctcctcctactcctcctctcccc 97 ||||||||||| |||||||||||| Sbjct: 137359 tctcctcctacccctcctctcccc 137382
>ref|XM_537821.2| PREDICTED: Canis familiaris similar to TBC1 domain family, member 13 (LOC480702), mRNA Length = 1290 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 ccccgccgccgccgcccccc 113 |||||||||||||||||||| Sbjct: 51 ccccgccgccgccgcccccc 32
>ref|XM_847376.1| PREDICTED: Canis familiaris similar to heat shock factor 2 (LOC610000), mRNA Length = 1971 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 ccccgccgccgccgcccccc 113 |||||||||||||||||||| Sbjct: 196 ccccgccgccgccgcccccc 177
>gb|AY242112.1| Sus scrofa EWB tyrosine hydroxylase (TH) gene, exon 14 and partial cds; preproinsulin (INS) gene, complete cds; and insulin-like growth factor 2 preproprotein (IGF2) gene, complete cds, alternatively spliced Length = 28397 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 92 ctccccgccgccgccgccccccac 115 ||||||||||||||||| |||||| Sbjct: 16182 ctccccgccgccgccgcgccccac 16159
>gb|AY242111.1| Sus scrofa H205 tyrosine hydroxylase (TH) gene, exon 14; preproinsulin (INS) gene, complete cds; and insulin-like growth factor 2 preproprotein (IGF2) gene, complete cds, alternatively spliced Length = 28190 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 92 ctccccgccgccgccgccccccac 115 ||||||||||||||||| |||||| Sbjct: 16020 ctccccgccgccgccgcgccccac 15997
>gb|AY242110.1| Sus scrofa H254 tyrosine hydroxylase (TH) gene, exon 14; preproinsulin (INS) gene, complete cds; and insulin-like growth factor 2 preproprotein (IGF2) gene, complete cds, alternatively spliced Length = 28177 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 92 ctccccgccgccgccgccccccac 115 ||||||||||||||||| |||||| Sbjct: 16023 ctccccgccgccgccgcgccccac 16000 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,766,786 Number of Sequences: 3902068 Number of extensions: 1766786 Number of successful extensions: 383549 Number of sequences better than 10.0: 409 Number of HSP's better than 10.0 without gapping: 381 Number of HSP's successfully gapped in prelim test: 80 Number of HSP's that attempted gapping in prelim test: 331435 Number of HSP's gapped (non-prelim): 53090 length of query: 204 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 182 effective length of database: 17,147,199,772 effective search space: 3120790358504 effective search space used: 3120790358504 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
