ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl12f03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|L37358.1|BLYLOXC Hordeum vulgare lipoxygenase 2 (LoxC) mRNA, ... 628 e-177
2ref|XM_469655.1| Oryza sativa (japonica cultivar-group), mRNA 194 1e-46
3dbj|AK073529.1| Oryza sativa (japonica cultivar-group) cDNA clon... 194 1e-46
4gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 180 2e-42
5gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genom... 180 2e-42
6dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 180 2e-42
7emb|X64396.1|OSLRNA O.sativa mRNA for lipoxygenase L-2 178 9e-42
8gb|L35931.1|BLYLOXA Barley lipoxygenase 1 (LoxA) gene, complete cds 168 8e-39
9ref|XM_469409.1| Oryza sativa (japonica cultivar-group), mRNA 165 1e-37
10gb|AF329371.1|AF329371 Zea mays lipoxygenase mRNA, complete cds 143 5e-31
11gb|AF457968.1| Zea mays clone cho1c.pk002.j23, mRNA sequence 143 5e-31
12gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosom... 127 3e-26
13gb|AC097368.3| Oryza sativa chromosome 3 BAC OSJNBb0017F17 genom... 127 3e-26
14gb|AF271894.1|AF271894 Zea mays lipoxygenase (LOX) mRNA, complet... 117 3e-23
15gb|AF464895.1| Oryza sativa basmati-370 lipoxygenase (Lox) gene,... 109 7e-21
16gb|AF465643.1| Zea mays B73 lipoxygenase gene, complete cds 109 7e-21
17gb|U83904.1|HVU83904 Hordeum vulgare lipoxygenase isoenzyme 1 (L... 107 3e-20
18gb|AF465642.1| Zea mays Golden cross bantam-70 lipoxygenase gene... 72 1e-09
19gb|AE005807.1| Caulobacter crescentus CB15 section 133 of 359 of... 44 0.33
20ref|NM_003028.1| Homo sapiens Src homology 2 domain containing a... 42 1.3
21gb|AY596511.1| Helicosporidium sp. ex Simulium jonesii gamma-car... 42 1.3
22emb|X75342.1|HSSHB H.sapiens SHB mRNA 42 1.3
23dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 42 1.3
24gb|AF357202.1| Streptomyces nodosus amphotericin biosynthetic ge... 40 5.1
25gb|AC145811.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.1
26gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome 40 5.1
27gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 compl... 40 5.1
28gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete... 40 5.1
29gb|AY316746.1| Rhizobium sp. NGR234 megaplasmid 2 contig 2, comp... 40 5.1
30emb|AL591790.1|SME591790 Sinorhizobium meliloti 1021 complete ch... 40 5.1
31gb|AC124918.5| Rattus norvegicus 4 BAC CH230-4H1 (Children's Hos... 40 5.1
32ref|XM_967239.1| PREDICTED: Tribolium castaneum similar to CG119... 40 5.1
33emb|X58825.1|SYPSAAB Synechocystis 6803 psaA and psaB genes for ... 40 5.1
34emb|CR555306.1| Azoarcus sp. EbN1 complete genome 40 5.1
35gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 5.1
36emb|AL731878.4|CNS08C8I Oryza sativa chromosome 3, . BAC OSJNBb0... 40 5.1
37gb|AC079160.5| Homo sapiens BAC clone RP11-176K15 from 4, comple... 40 5.1
38gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome 40 5.1
39dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 5.1
40gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 5.1
41dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome 40 5.1
42dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 5.1
43dbj|AK109329.2| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.1
44gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 5.1

>gb|L37358.1|BLYLOXC Hordeum vulgare lipoxygenase 2 (LoxC) mRNA, complete cds
          Length = 2910

 Score =  628 bits (317), Expect = e-177
 Identities = 369/381 (96%), Gaps = 4/381 (1%)
 Strand = Plus / Plus

                                                                       
Query: 2   tcacacagcagcaccacagcgagctaacttagcaagcgcgccacactccccagagatcga 61
           |||||||||| |||| |||||||||||||||| ||||| ||||||||||| |||||||||
Sbjct: 2   tcacacagca-caccgcagcgagctaacttag-aagcgtgccacactccc-agagatcga 58

                                                                       
Query: 62  gcgaagatgtttggcgtcggcggcatcgtgagcgacctgacggggggcctccggggcgcc 121
           || |||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 59  gc-aagatgcttggcgtcggcggcatcgtgagcgacttgacggggggcatccggggcgcc 117

                                                                       
Query: 122 cacctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacttcggc 181
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 cacctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacttcggc 177

                                                                       
Query: 182 gccaccgtcatggacggcgtcaccgagctccccggccgcggcgtcacctgccagctcatc 241
           |||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 178 gcccacgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgccagctcatc 237

                                                                       
Query: 242 agctccaccaacgtcgaccacaacaacggtgggcgcgggaaggtgggcgcggaggcgaac 301
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 agctccaccaacgtcgaccacaacaacggtgggcgcgggaaggtgggcgcggaggcgaac 297

                                                                       
Query: 302 ctggagcagtggctcctgccgacgaacctgccgttcatcaccaccggcgagaacaagttc 361
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 ctggagcagtggctcctgccgacgaacctgccgttcatcaccaccggcgagaacaagttc 357

                                
Query: 362 gccgtcaccttcgactggtcg 382
           |||||||||||||||||||||
Sbjct: 358 gccgtcaccttcgactggtcg 378



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>ref|XM_469655.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2613

 Score =  194 bits (98), Expect = 1e-46
 Identities = 173/198 (87%)
 Strand = Plus / Plus

                                                                       
Query: 118 cgcccacctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgactt 177
           ||||| ||||||||||||| |||||||||||||||||||||| |||||| ||||||||||
Sbjct: 42  cgcccgcctcaagggctccctcgtcctcatgcgcaagaacgccctcgacatcaacgactt 101

                                                                       
Query: 178 cggcgccaccgtcatggacggcgtcaccgagctccccggccgcggcgtcacctgccagct 237
           ||||||||||||||| |||||| || ||||| ||| ||||||||||||||||||||||||
Sbjct: 102 cggcgccaccgtcatcgacggcatctccgagttcctcggccgcggcgtcacctgccagct 161

                                                                       
Query: 238 catcagctccaccaacgtcgaccacaacaacggtgggcgcgggaaggtgggcgcggaggc 297
           | |||||||| ||  |||||||| |||||| ||     | |||| ||||||  |||||||
Sbjct: 162 cgtcagctcctccctcgtcgaccccaacaatgggaacagggggagggtggggacggaggc 221

                             
Query: 298 gaacctggagcagtggct 315
           || |||||||||||||||
Sbjct: 222 gagcctggagcagtggct 239



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>dbj|AK073529.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046E17, full
           insert sequence
          Length = 2928

 Score =  194 bits (98), Expect = 1e-46
 Identities = 173/198 (87%)
 Strand = Plus / Plus

                                                                       
Query: 118 cgcccacctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgactt 177
           ||||| ||||||||||||| |||||||||||||||||||||| |||||| ||||||||||
Sbjct: 157 cgcccgcctcaagggctccctcgtcctcatgcgcaagaacgccctcgacatcaacgactt 216

                                                                       
Query: 178 cggcgccaccgtcatggacggcgtcaccgagctccccggccgcggcgtcacctgccagct 237
           ||||||||||||||| |||||| || ||||| ||| ||||||||||||||||||||||||
Sbjct: 217 cggcgccaccgtcatcgacggcatctccgagttcctcggccgcggcgtcacctgccagct 276

                                                                       
Query: 238 catcagctccaccaacgtcgaccacaacaacggtgggcgcgggaaggtgggcgcggaggc 297
           | |||||||| ||  |||||||| |||||| ||     | |||| ||||||  |||||||
Sbjct: 277 cgtcagctcctccctcgtcgaccccaacaatgggaacagggggagggtggggacggaggc 336

                             
Query: 298 gaacctggagcagtggct 315
           || |||||||||||||||
Sbjct: 337 gagcctggagcagtggct 354



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  180 bits (91), Expect = 2e-42
 Identities = 130/143 (90%)
 Strand = Plus / Plus

                                                                            
Query: 118      cgcccacctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgactt 177
                ||||| ||||||||||||| |||||||||||||||||||||| |||||| ||||||||||
Sbjct: 30023301 cgcccgcctcaagggctccctcgtcctcatgcgcaagaacgccctcgacatcaacgactt 30023360

                                                                            
Query: 178      cggcgccaccgtcatggacggcgtcaccgagctccccggccgcggcgtcacctgccagct 237
                ||||||||||||||| |||||| || ||||| ||| ||||||||||||||||||||||||
Sbjct: 30023361 cggcgccaccgtcatcgacggcatctccgagttcctcggccgcggcgtcacctgccagct 30023420

                                       
Query: 238      catcagctccaccaacgtcgacc 260
                | |||||||| ||  ||||||||
Sbjct: 30023421 cgtcagctcctccctcgtcgacc 30023443



 Score =  127 bits (64), Expect = 3e-26
 Identities = 118/136 (86%)
 Strand = Plus / Plus

                                                                            
Query: 125      ctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacttcggcgcc 184
                ||||||||| | || || ||||||||||||||||  |||||| |||||||||||||||||
Sbjct: 27798757 ctcaagggcacggtggtgctcatgcgcaagaacgtcctcgacctcaacgacttcggcgcc 27798816

                                                                            
Query: 185      accgtcatggacggcgtcaccgagctccccggccgcggcgtcacctgccagctcatcagc 244
                |||||||| |||||| ||  |||| ||| ||||   ||||||||||||||||||||||||
Sbjct: 27798817 accgtcatcgacggcctcggcgagttcctcggcaagggcgtcacctgccagctcatcagc 27798876

                                
Query: 245      tccaccaacgtcgacc 260
                ||||||  ||||||||
Sbjct: 27798877 tccaccgccgtcgacc 27798892



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                      
Query: 278      gggaaggtgggcgcggaggcgaacctggagcagtggct 315
                ||||||||||| |||||||||| |||||||||||||||
Sbjct: 27799308 gggaaggtgggggcggaggcgagcctggagcagtggct 27799345



 Score = 44.1 bits (22), Expect = 0.33
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                      
Query: 278      gggaaggtgggcgcggaggcgaacctggagcagtggct 315
                |||| ||||||  ||||||||| |||||||||||||||
Sbjct: 30023539 gggagggtggggacggaggcgagcctggagcagtggct 30023576



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 74       ggcgtcggcggcatcgtgag 93
                ||||||||||||||||||||
Sbjct: 24817033 ggcgtcggcggcatcgtgag 24817052



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>gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genomic sequence, complete
             sequence
          Length = 155106

 Score =  180 bits (91), Expect = 2e-42
 Identities = 130/143 (90%)
 Strand = Plus / Minus

                                                                         
Query: 118   cgcccacctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgactt 177
             ||||| ||||||||||||| |||||||||||||||||||||| |||||| ||||||||||
Sbjct: 84450 cgcccgcctcaagggctccctcgtcctcatgcgcaagaacgccctcgacatcaacgactt 84391

                                                                         
Query: 178   cggcgccaccgtcatggacggcgtcaccgagctccccggccgcggcgtcacctgccagct 237
             ||||||||||||||| |||||| || ||||| ||| ||||||||||||||||||||||||
Sbjct: 84390 cggcgccaccgtcatcgacggcatctccgagttcctcggccgcggcgtcacctgccagct 84331

                                    
Query: 238   catcagctccaccaacgtcgacc 260
             | |||||||| ||  ||||||||
Sbjct: 84330 cgtcagctcctccctcgtcgacc 84308



 Score = 44.1 bits (22), Expect = 0.33
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                   
Query: 278   gggaaggtgggcgcggaggcgaacctggagcagtggct 315
             |||| ||||||  ||||||||| |||||||||||||||
Sbjct: 84212 gggagggtggggacggaggcgagcctggagcagtggct 84175



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  180 bits (91), Expect = 2e-42
 Identities = 130/143 (90%)
 Strand = Plus / Plus

                                                                            
Query: 118      cgcccacctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgactt 177
                ||||| ||||||||||||| |||||||||||||||||||||| |||||| ||||||||||
Sbjct: 30114723 cgcccgcctcaagggctccctcgtcctcatgcgcaagaacgccctcgacatcaacgactt 30114782

                                                                            
Query: 178      cggcgccaccgtcatggacggcgtcaccgagctccccggccgcggcgtcacctgccagct 237
                ||||||||||||||| |||||| || ||||| ||| ||||||||||||||||||||||||
Sbjct: 30114783 cggcgccaccgtcatcgacggcatctccgagttcctcggccgcggcgtcacctgccagct 30114842

                                       
Query: 238      catcagctccaccaacgtcgacc 260
                | |||||||| ||  ||||||||
Sbjct: 30114843 cgtcagctcctccctcgtcgacc 30114865



 Score =  127 bits (64), Expect = 3e-26
 Identities = 118/136 (86%)
 Strand = Plus / Plus

                                                                            
Query: 125      ctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacttcggcgcc 184
                ||||||||| | || || ||||||||||||||||  |||||| |||||||||||||||||
Sbjct: 27890081 ctcaagggcacggtggtgctcatgcgcaagaacgtcctcgacctcaacgacttcggcgcc 27890140

                                                                            
Query: 185      accgtcatggacggcgtcaccgagctccccggccgcggcgtcacctgccagctcatcagc 244
                |||||||| |||||| ||  |||| ||| ||||   ||||||||||||||||||||||||
Sbjct: 27890141 accgtcatcgacggcctcggcgagttcctcggcaagggcgtcacctgccagctcatcagc 27890200

                                
Query: 245      tccaccaacgtcgacc 260
                ||||||  ||||||||
Sbjct: 27890201 tccaccgccgtcgacc 27890216



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                      
Query: 278      gggaaggtgggcgcggaggcgaacctggagcagtggct 315
                ||||||||||| |||||||||| |||||||||||||||
Sbjct: 27890632 gggaaggtgggggcggaggcgagcctggagcagtggct 27890669



 Score = 44.1 bits (22), Expect = 0.33
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                      
Query: 278      gggaaggtgggcgcggaggcgaacctggagcagtggct 315
                |||| ||||||  ||||||||| |||||||||||||||
Sbjct: 30114961 gggagggtggggacggaggcgagcctggagcagtggct 30114998



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 74       ggcgtcggcggcatcgtgag 93
                ||||||||||||||||||||
Sbjct: 24908356 ggcgtcggcggcatcgtgag 24908375



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>emb|X64396.1|OSLRNA O.sativa mRNA for lipoxygenase L-2
          Length = 2830

 Score =  178 bits (90), Expect = 9e-42
 Identities = 171/198 (86%)
 Strand = Plus / Plus

                                                                       
Query: 118 cgcccacctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgactt 177
           ||||| ||||||||||||| |||||||||||||||||||||| |||||| ||||||||||
Sbjct: 139 cgcccgcctcaagggctccctcgtcctcatgcgcaagaacgccctcgacatcaacgactt 198

                                                                       
Query: 178 cggcgccaccgtcatggacggcgtcaccgagctccccggccgcggcgtcacctgccagct 237
           ||||||||||||||| ||  || || ||||| ||| ||||||||||||||||||||||||
Sbjct: 199 cggcgccaccgtcatcgagcgcatctccgagttcctcggccgcggcgtcacctgccagct 258

                                                                       
Query: 238 catcagctccaccaacgtcgaccacaacaacggtgggcgcgggaaggtgggcgcggaggc 297
           | |||||||| ||  |||||||| |||||| ||     | |||| ||||||  |||||||
Sbjct: 259 cgtcagctcctccctcgtcgaccccaacaatgggaacagggggagggtggggacggaggc 318

                             
Query: 298 gaacctggagcagtggct 315
           || |||||||||||||||
Sbjct: 319 gagcctggagcagtggct 336



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>gb|L35931.1|BLYLOXA Barley lipoxygenase 1 (LoxA) gene, complete cds
          Length = 2818

 Score =  168 bits (85), Expect = 8e-39
 Identities = 163/189 (86%)
 Strand = Plus / Plus

                                                                       
Query: 125 ctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacttcggcgcc 184
           ||||||||| | || || |||||||||||||||| ||| ||| |||||||||||||||||
Sbjct: 123 ctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctcaacgacttcggcgcc 182

                                                                       
Query: 185 accgtcatggacggcgtcaccgagctccccggccgcggcgtcacctgccagctcatcagc 244
           ||| |||| |||||| ||  |||| ||| ||||   ||||||||||||||||| ||||||
Sbjct: 183 accatcatcgacggcatcggcgagttcctcggcaagggcgtcacctgccagcttatcagc 242

                                                                       
Query: 245 tccaccaacgtcgaccacaacaacggtgggcgcgggaaggtgggcgcggaggcgaacctg 304
           ||||||  |||||||||  ||||||| || |||||||||||||||||||||||| | |||
Sbjct: 243 tccaccgccgtcgaccaagacaacggcggtcgcgggaaggtgggcgcggaggcggagctg 302

                    
Query: 305 gagcagtgg 313
           |||||||||
Sbjct: 303 gagcagtgg 311



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>ref|XM_469409.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2601

 Score =  165 bits (83), Expect = 1e-37
 Identities = 164/191 (85%)
 Strand = Plus / Plus

                                                                       
Query: 125 ctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacttcggcgcc 184
           ||||||||| | || || ||||||||||||||||  |||||| |||||||||||||||||
Sbjct: 52  ctcaagggcacggtggtgctcatgcgcaagaacgtcctcgacctcaacgacttcggcgcc 111

                                                                       
Query: 185 accgtcatggacggcgtcaccgagctccccggccgcggcgtcacctgccagctcatcagc 244
           |||||||| |||||| ||  |||| ||| ||||   ||||||||||||||||||||||||
Sbjct: 112 accgtcatcgacggcctcggcgagttcctcggcaagggcgtcacctgccagctcatcagc 171

                                                                       
Query: 245 tccaccaacgtcgaccacaacaacggtgggcgcgggaaggtgggcgcggaggcgaacctg 304
           ||||||  ||||||||  ||||||||    || ||||||||||| |||||||||| ||||
Sbjct: 172 tccaccgccgtcgacccaaacaacggcaaccgggggaaggtgggggcggaggcgagcctg 231

                      
Query: 305 gagcagtggct 315
           |||||||||||
Sbjct: 232 gagcagtggct 242



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>gb|AF329371.1|AF329371 Zea mays lipoxygenase mRNA, complete cds
          Length = 2595

 Score =  143 bits (72), Expect = 5e-31
 Identities = 209/255 (81%), Gaps = 6/255 (2%)
 Strand = Plus / Plus

                                                                       
Query: 125 ctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacttcggcgcc 184
           ||||||||| | || || |||||||||||||||| ||| ||| |||||||||||||||||
Sbjct: 52  ctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctcaacgacttcggcgcc 111

                                                                       
Query: 185 accgtcatggacggcgtcaccgagctccccggccgcggcgtcacctgccagctcatcagc 244
           |||||| | ||| || ||| |||| ||| ||||   || |||||||||||||||||||||
Sbjct: 112 accgtcgttgacagcatcagcgagttcctcggcaagggggtcacctgccagctcatcagc 171

                                                                       
Query: 245 tccaccaacgtcgaccacaacaacggtgggcgcgggaaggtgggcgcggaggcgaacctg 304
           ||||||  |||||||  |||||||||    ||||||  ||| || |||||||||||||||
Sbjct: 172 tccaccctcgtcgacgccaacaacggcaaccgcgggcgggtcggggcggaggcgaacctg 231

                                                                       
Query: 305 gagcagtggctcctgccgacgaacctgccgttcatcaccaccggcgagaacaagttcgcc 364
           |||||||||||      ||||| ||||||||   | || |||||||||  |||||||| |
Sbjct: 232 gagcagtggct------gacgagcctgccgtcgctgacgaccggcgagtccaagttcggc 285

                          
Query: 365 gtcaccttcgactgg 379
           ||||| |||||||||
Sbjct: 286 gtcacgttcgactgg 300



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>gb|AF457968.1| Zea mays clone cho1c.pk002.j23, mRNA sequence
          Length = 515

 Score =  143 bits (72), Expect = 5e-31
 Identities = 209/255 (81%), Gaps = 6/255 (2%)
 Strand = Plus / Plus

                                                                       
Query: 125 ctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacttcggcgcc 184
           ||||||||| | || || |||||||||||||||| ||| ||| |||||||||||||||||
Sbjct: 114 ctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctcaacgacttcggcgcc 173

                                                                       
Query: 185 accgtcatggacggcgtcaccgagctccccggccgcggcgtcacctgccagctcatcagc 244
           |||||| | ||| || ||| |||| ||| ||||   || |||||||||||||||||||||
Sbjct: 174 accgtcgttgacagcatcagcgagttcctcggcaagggggtcacctgccagctcatcagc 233

                                                                       
Query: 245 tccaccaacgtcgaccacaacaacggtgggcgcgggaaggtgggcgcggaggcgaacctg 304
           ||||||  |||||||  |||||||||    ||||||  ||| || |||||||||||||||
Sbjct: 234 tccaccctcgtcgacgccaacaacggcaaccgcgggcgggtcggggcggaggcgaacctg 293

                                                                       
Query: 305 gagcagtggctcctgccgacgaacctgccgttcatcaccaccggcgagaacaagttcgcc 364
           |||||||||||      ||||| ||||||||   | || |||||||||  |||||||| |
Sbjct: 294 gagcagtggct------gacgagcctgccgtcgctgacgaccggcgagtccaagttcggc 347

                          
Query: 365 gtcaccttcgactgg 379
           ||||| |||||||||
Sbjct: 348 gtcacgttcgactgg 362



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>gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0024B16
             map S2606, complete sequence
          Length = 124140

 Score =  127 bits (64), Expect = 3e-26
 Identities = 118/136 (86%)
 Strand = Plus / Plus

                                                                         
Query: 125   ctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacttcggcgcc 184
             ||||||||| | || || ||||||||||||||||  |||||| |||||||||||||||||
Sbjct: 42887 ctcaagggcacggtggtgctcatgcgcaagaacgtcctcgacctcaacgacttcggcgcc 42946

                                                                         
Query: 185   accgtcatggacggcgtcaccgagctccccggccgcggcgtcacctgccagctcatcagc 244
             |||||||| |||||| ||  |||| ||| ||||   ||||||||||||||||||||||||
Sbjct: 42947 accgtcatcgacggcctcggcgagttcctcggcaagggcgtcacctgccagctcatcagc 43006

                             
Query: 245   tccaccaacgtcgacc 260
             ||||||  ||||||||
Sbjct: 43007 tccaccgccgtcgacc 43022



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                   
Query: 278   gggaaggtgggcgcggaggcgaacctggagcagtggct 315
             ||||||||||| |||||||||| |||||||||||||||
Sbjct: 43438 gggaaggtgggggcggaggcgagcctggagcagtggct 43475



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>gb|AC097368.3| Oryza sativa chromosome 3 BAC OSJNBb0017F17 genomic sequence, complete
             sequence
          Length = 119329

 Score =  127 bits (64), Expect = 3e-26
 Identities = 118/136 (86%)
 Strand = Plus / Minus

                                                                         
Query: 125   ctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacttcggcgcc 184
             ||||||||| | || || ||||||||||||||||  |||||| |||||||||||||||||
Sbjct: 15136 ctcaagggcacggtggtgctcatgcgcaagaacgtcctcgacctcaacgacttcggcgcc 15077

                                                                         
Query: 185   accgtcatggacggcgtcaccgagctccccggccgcggcgtcacctgccagctcatcagc 244
             |||||||| |||||| ||  |||| ||| ||||   ||||||||||||||||||||||||
Sbjct: 15076 accgtcatcgacggcctcggcgagttcctcggcaagggcgtcacctgccagctcatcagc 15017

                             
Query: 245   tccaccaacgtcgacc 260
             ||||||  ||||||||
Sbjct: 15016 tccaccgccgtcgacc 15001



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                   
Query: 278   gggaaggtgggcgcggaggcgaacctggagcagtggct 315
             ||||||||||| |||||||||| |||||||||||||||
Sbjct: 14585 gggaaggtgggggcggaggcgagcctggagcagtggct 14548



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>gb|AF271894.1|AF271894 Zea mays lipoxygenase (LOX) mRNA, complete cds
          Length = 2845

 Score =  117 bits (59), Expect = 3e-23
 Identities = 98/111 (88%)
 Strand = Plus / Plus

                                                                       
Query: 205 cgagctccccggccgcggcgtcacctgccagctcatcagctccaccaacgtcgaccacaa 264
           |||| ||| |||||||||||||||||||||||| ||||||||||||  ||||||||  ||
Sbjct: 153 cgagttcctcggccgcggcgtcacctgccagcttatcagctccaccgtcgtcgaccctaa 212

                                                              
Query: 265 caacggtgggcgcgggaaggtgggcgcggaggcgaacctggagcagtggct 315
           ||||||    ||||||||| ||||||||||||||| |||||||||||||||
Sbjct: 213 caacggcaaccgcgggaagttgggcgcggaggcgagcctggagcagtggct 263



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 348 gcgagaacaagttcgccgtcaccttcgactgg 379
           |||||||| |||||  ||||||||||||||||
Sbjct: 290 gcgagaaccagttccgcgtcaccttcgactgg 321



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>gb|AF464895.1| Oryza sativa basmati-370 lipoxygenase (Lox) gene, partial cds
          Length = 1160

 Score =  109 bits (55), Expect = 7e-21
 Identities = 88/99 (88%)
 Strand = Plus / Plus

                                                                       
Query: 149 cgcaagaacgcgctcgacttcaacgacttcggcgccaccgtcatggacggcgtcaccgag 208
           ||||||||||| |||||| ||||||||||||||||||||||| | |   ||||| |||||
Sbjct: 1   cgcaagaacgccctcgacatcaacgacttcggcgccaccgtcctcgggcgcgtctccgag 60

                                                  
Query: 209 ctccccggccgcggcgtcacctgccagctcatcagctcc 247
            ||| ||||||||||||||||||||||||| ||||||||
Sbjct: 61  ttcctcggccgcggcgtcacctgccagctcgtcagctcc 99



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>gb|AF465643.1| Zea mays B73 lipoxygenase gene, complete cds
          Length = 5013

 Score =  109 bits (55), Expect = 7e-21
 Identities = 115/135 (85%)
 Strand = Plus / Plus

                                                                       
Query: 125 ctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacttcggcgcc 184
           ||||||||| | || || |||||||||||||||| ||| ||| |||||||||||||||||
Sbjct: 200 ctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctcaacgacttcggcgcc 259

                                                                       
Query: 185 accgtcatggacggcgtcaccgagctccccggccgcggcgtcacctgccagctcatcagc 244
           |||||| | ||| || ||| |||| ||| ||||   || |||||||||||||||||||||
Sbjct: 260 accgtcgttgacagcatcagcgagttcctcggcaagggggtcacctgccagctcatcagc 319

                          
Query: 245 tccaccaacgtcgac 259
           ||||||  |||||||
Sbjct: 320 tccaccctcgtcgac 334



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 74/90 (82%), Gaps = 6/90 (6%)
 Strand = Plus / Plus

                                                                        
Query: 290  gcggaggcgaacctggagcagtggctcctgccgacgaacctgccgttcatcaccaccggc 349
            ||||||||||||||||||||||||||      ||||| ||||||||   | || ||||||
Sbjct: 945  gcggaggcgaacctggagcagtggct------gacgagcctgccgtcgctgacgaccggc 998

                                          
Query: 350  gagaacaagttcgccgtcaccttcgactgg 379
            |||  |||||||| |||||| |||||||||
Sbjct: 999  gagtccaagttcggcgtcacgttcgactgg 1028



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>gb|U83904.1|HVU83904 Hordeum vulgare lipoxygenase isoenzyme 1 (Lox:Hv1) gene, promoter
            region and partial cds
          Length = 5236

 Score =  107 bits (54), Expect = 3e-20
 Identities = 108/126 (85%)
 Strand = Plus / Plus

                                                                        
Query: 125  ctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacttcggcgcc 184
            ||||||||| | || || |||||||||||||||| ||| ||| |||||||||||||||||
Sbjct: 3566 ctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctcaacgacttcggcgcc 3625

                                                                        
Query: 185  accgtcatggacggcgtcaccgagctccccggccgcggcgtcacctgccagctcatcagc 244
            ||| |||| |||||| ||  |||| ||| ||||   ||||||||||||||||| ||||||
Sbjct: 3626 accatcatcgacggcatcggcgagttcctcggcaagggcgtcacctgccagcttatcagc 3685

                  
Query: 245  tccacc 250
            ||||||
Sbjct: 3686 tccacc 3691



 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 46/50 (92%)
 Strand = Plus / Plus

                                                              
Query: 264  acaacggtgggcgcgggaaggtgggcgcggaggcgaacctggagcagtgg 313
            ||||||| || |||||||||||||||||||||||| | ||||||||||||
Sbjct: 4255 acaacggcggtcgcgggaaggtgggcgcggaggcggagctggagcagtgg 4304



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>gb|AF465642.1| Zea mays Golden cross bantam-70 lipoxygenase gene, promoter region
            and partial cds
          Length = 3196

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 63/72 (87%)
 Strand = Plus / Plus

                                                                        
Query: 189  tcatggacggcgtcaccgagctccccggccgcggcgtcacctgccagctcatcagctcca 248
            ||||||||||| ||  |||| ||| ||||||||||||||||||||| ||| |||||||||
Sbjct: 2387 tcatggacggcctcggcgagttcctcggccgcggcgtcacctgccaactcgtcagctcca 2446

                        
Query: 249  ccaacgtcgacc 260
            ||  ||||||||
Sbjct: 2447 ccgtcgtcgacc 2458



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                          
Query: 275  cgcgggaaggtgggcgcggaggcgaacctggagcagtggctcctgc 320
            ||||||||||||||   |||||||| ||||||||||||||| ||||
Sbjct: 2744 cgcgggaaggtgggtcaggaggcgagcctggagcagtggctgctgc 2789



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>gb|AE005807.1| Caulobacter crescentus CB15 section 133 of 359 of the complete genome
          Length = 8803

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 157  cgcgctcgacttcaacgacttcggcg 182
            ||||| ||||||||||||||||||||
Sbjct: 4469 cgcgcacgacttcaacgacttcggcg 4494



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>ref|NM_003028.1| Homo sapiens Src homology 2 domain containing adaptor protein B
           (SHB), mRNA
          Length = 2306

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 102 cggggggcctccggggcgccc 122
           |||||||||||||||||||||
Sbjct: 469 cggggggcctccggggcgccc 449



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>gb|AY596511.1| Helicosporidium sp. ex Simulium jonesii gamma-carbonic anhydrase
           mRNA, partial cds
          Length = 775

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 178 cggcgccaccgtcatggacggcgtcaccg 206
           ||||||||| ||||||||||||| |||||
Sbjct: 400 cggcgccacggtcatggacggcgccaccg 428



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>emb|X75342.1|HSSHB H.sapiens SHB mRNA
          Length = 2306

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 102 cggggggcctccggggcgccc 122
           |||||||||||||||||||||
Sbjct: 469 cggggggcctccggggcgccc 449



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>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 211     ccccggccgcggcgtcacctgccag 235
               |||||||||||||| ||||||||||
Sbjct: 3644880 ccccggccgcggcggcacctgccag 3644904



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>gb|AF357202.1| Streptomyces nodosus amphotericin biosynthetic gene cluster, complete
             sequence
          Length = 113193

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                 
Query: 194   gacggcgtcaccgagctccccggccgcggcgtcacc 229
             ||||||||||||   ||| |||||||||||||||||
Sbjct: 82347 gacggcgtcaccaccctcgccggccgcggcgtcacc 82382



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>gb|AC145811.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0088L13
             map near C50029S, complete sequence
          Length = 129900

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 74    ggcgtcggcggcatcgtgag 93
             ||||||||||||||||||||
Sbjct: 52268 ggcgtcggcggcatcgtgag 52287



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>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 313    gctcctgccgacgaacctgc 332
              ||||||||||||||||||||
Sbjct: 137505 gctcctgccgacgaacctgc 137486



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>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome
          Length = 6397126

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 327    acctgccgttcatcaccaccggcg 350
              ||||||||||||||| ||||||||
Sbjct: 288875 acctgccgttcatcatcaccggcg 288852



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>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome
          Length = 6093698

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 327    acctgccgttcatcaccaccggcg 350
              ||||||||||||||| ||||||||
Sbjct: 153202 acctgccgttcatcatcaccggcg 153225



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>gb|AY316746.1| Rhizobium sp. NGR234 megaplasmid 2 contig 2, complete sequence
          Length = 236455

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 79     cggcggcatcgtgagcgacctgac 102
              ||||||||||| ||||||||||||
Sbjct: 205636 cggcggcatcgagagcgacctgac 205659



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>emb|AL591790.1|SME591790 Sinorhizobium meliloti 1021 complete chromosome; segment 9/12
          Length = 323450

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 79    cggcggcatcgtgagcgacctgac 102
             ||||||||||| ||||||||||||
Sbjct: 80122 cggcggcatcgagagcgacctgac 80099



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>gb|AC124918.5| Rattus norvegicus 4 BAC CH230-4H1 (Children's Hospital Oakland Research
             Institute) complete sequence
          Length = 228052

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 234   agctcatcagctccaccaac 253
             ||||||||||||||||||||
Sbjct: 82121 agctcatcagctccaccaac 82102



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>ref|XM_967239.1| PREDICTED: Tribolium castaneum similar to CG11980-PC, isoform C
           (LOC661050), mRNA
          Length = 1156

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 247 caccaacgtcgaccacaaca 266
           ||||||||||||||||||||
Sbjct: 239 caccaacgtcgaccacaaca 220



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>emb|X58825.1|SYPSAAB Synechocystis 6803 psaA and psaB genes for P700 apoprotein Ia and Ib
            subunits
          Length = 4938

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 211  ccccggccgcggcgtcacctgcca 234
            |||||||||||||| |||||||||
Sbjct: 1941 ccccggccgcggcggcacctgcca 1964



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>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 331     gccgttcatcaccaccggcg 350
               ||||||||||||||||||||
Sbjct: 1867059 gccgttcatcaccaccggcg 1867040



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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 211    ccccggccgcggcgtcacctgcca 234
              |||||||||||||| |||||||||
Sbjct: 769949 ccccggccgcggcggcacctgcca 769926



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>emb|AL731878.4|CNS08C8I Oryza sativa chromosome 3, . BAC OSJNBb0116P11 of library OSJNBb from
              chromosome 3 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 128559

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 74     ggcgtcggcggcatcgtgag 93
              ||||||||||||||||||||
Sbjct: 103984 ggcgtcggcggcatcgtgag 104003



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>gb|AC079160.5| Homo sapiens BAC clone RP11-176K15 from 4, complete sequence
          Length = 147727

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 300   acctggagcagtggctcctg 319
             ||||||||||||||||||||
Sbjct: 78731 acctggagcagtggctcctg 78750



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>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 177     tcggcgccaccgtcatggacggcg 200
               ||||||||| ||||||||||||||
Sbjct: 2990742 tcggcgccatcgtcatggacggcg 2990719



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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 74      ggcgtcggcggcatcgtgagcgac 97
               |||||||||||||||||| |||||
Sbjct: 5079435 ggcgtcggcggcatcgtgcgcgac 5079412



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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 198     gcgtcaccgagctccccggccgcggcgt 225
               ||||||||||| || |||||||||||||
Sbjct: 1576694 gcgtcaccgagatctccggccgcggcgt 1576721



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>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome
          Length = 3573470

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 211    ccccggccgcggcgtcacctgcca 234
              |||||||||||||| |||||||||
Sbjct: 943413 ccccggccgcggcggcacctgcca 943436



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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 74     ggcgtcggcggcatcgtgagcgac 97
              |||||||||||||||||| |||||
Sbjct: 590306 ggcgtcggcggcatcgtgcgcgac 590329



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 147    tgcgcaagaacgcgctcgacttca 170
              ||||||||||| ||||||||||||
Sbjct: 206796 tgcgcaagaacccgctcgacttca 206773



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>dbj|AK109329.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-B01, full
           insert sequence
          Length = 1556

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 74  ggcgtcggcggcatcgtgag 93
           ||||||||||||||||||||
Sbjct: 613 ggcgtcggcggcatcgtgag 594



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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 74     ggcgtcggcggcatcgtgagcgac 97
              |||||||||||||||||| |||||
Sbjct: 657733 ggcgtcggcggcatcgtgcgcgac 657756


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,171,951
Number of Sequences: 3902068
Number of extensions: 2171951
Number of successful extensions: 47098
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 45821
Number of HSP's gapped (non-prelim): 1270
length of query: 382
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 360
effective length of database: 17,147,199,772
effective search space: 6172991917920
effective search space used: 6172991917920
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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