>ATKA_STRAW (Q82PI3) Potassium-transporting ATPase A chain (EC 3.6.3.12)|
           (Potassium-translocating ATPase A chain) (ATP
           phosphohydrolase [potassium-transporting] A chain)
           (Potassium-binding and translocating subunit A)
          Length = 554

 Score = 31.2 bits (69), Expect = 0.63
 Identities = 19/58 (32%), Positives = 25/58 (43%)
 Frame = +3

Query: 96  SRSWSGRARRKQPAHVLAGAQGGGWFACRGTRPISLVAPATASDFSRASKCHLLVLRP 269
           S+ W+G A   Q A   AG  GGG+F      P     P     FS   +  L++L P
Sbjct: 210 SQQWNGGAVASQEAIKEAGTNGGGYFNANSAHPFENPGP-----FSNLFEIFLILLIP 262

>CXA12_HUMAN (Q5T442) Gap junction alpha-12 protein (Connexin-47) (Cx47)|
           (Connexin-46.6) (Cx46.6)
          Length = 439

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 15/39 (38%), Positives = 16/39 (41%)
 Frame = -2

Query: 247 HLDAREKSDAVAGATSEIGRVPRQANHPPPCAPASTCAG 131
           HL      DAV G        P  A  PPPCA  +  AG
Sbjct: 288 HLGLGSAQDAVRGRRGPPASAPAPAPRPPPCAFPAAAAG 326

>SPAST_MOUSE (Q9QYY8) Spastin|
          Length = 614

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 11/30 (36%), Positives = 20/30 (66%)
 Frame = +2

Query: 8   PASIIRHNQPRPHHTHFPSSPTTAHQQQSE 97
           PA+      P+P+ T+ PS+PTTA +++ +
Sbjct: 282 PAATTHKGTPKPNRTNKPSTPTTAVRKKKD 311

>CXA12_RAT (Q80XF7) Gap junction alpha-12 protein (Connexin-47) (Cx47)|
          Length = 440

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 15/39 (38%), Positives = 16/39 (41%)
 Frame = -2

Query: 247 HLDAREKSDAVAGATSEIGRVPRQANHPPPCAPASTCAG 131
           HL      DAV G        P  A  PPPCA  +  AG
Sbjct: 287 HLGLGSAQDAVRGRRGASAAGPGPAPRPPPCAFPAAAAG 325

>MAP1A_RAT (P34926) Microtubule-associated protein 1A (MAP 1A) [Contains: MAP1|
           light chain LC2]
          Length = 2774

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
 Frame = -1

Query: 176 SKPSTPLRSGEHVRR---LLPPRPSAPGSTHSAAD 81
           ++PS P+  GEHV R   ++P  P   GST+   D
Sbjct: 576 TQPSGPVLEGEHVEREKEVVPDSPGDKGSTNRGPD 610

>ZN645_MACFA (Q4R361) Zinc finger protein 645|
          Length = 422

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = -2

Query: 196 IGRVPRQANHPPPCAPAS 143
           I +VP   N PPPCAP S
Sbjct: 325 IAQVPPYMNSPPPCAPQS 342

>CTF1A_FUSSO (P52958) Cutinase transcription factor 1 alpha|
          Length = 909

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -1

Query: 176 SKPSTPLRSGEHVRRLLPPRPSAPGSTHSAAD 81
           S+P TP         + PP  S+PG+  SAAD
Sbjct: 702 SRPQTPSAVKAETSSMQPPPVSSPGARQSAAD 733

>BRD4_MOUSE (Q9ESU6) Bromodomain-containing protein 4 (Mitotic|
            chromosome-associated protein) (MCAP)
          Length = 1400

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +2

Query: 23   RHNQPRPHHTHFPSSPTTAHQQQ 91
            + +QP P   H PS P +AH QQ
Sbjct: 991  QQHQPPPRPVHLPSMPFSAHIQQ 1013

>HAK1_ORYSA (Q6VVA6) Potassium transporter 1 (OsHAK1)|
          Length = 801

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +2

Query: 254 PGATSIT*LLRAHEKEVRGGER*SSSETHHGGPAGSWFVEI 376
           P AT+    L+ H+      E+ S  + HHGG A SW V +
Sbjct: 17  PAATATASRLKRHDSLFGDAEKVSGGK-HHGGSAVSWAVTL 56

>TSH_DROME (P22265) Protein teashirt|
          Length = 954

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 10/42 (23%)
 Frame = -1

Query: 176 SKPSTPLRSGEHVRRLLPPR----------PSAPGSTHSAAD 81
           S P TP  +     RLLPPR          P +P S+H + D
Sbjct: 840 SSPKTPSSAASPQTRLLPPRSPAESQRSVTPKSPASSHKSYD 881

>PCPB_SPHCR (P42535) Pentachlorophenol 4-monooxygenase (EC 1.14.13.50)|
           (Pentachlorophenol hydroxylase)
          Length = 537

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +3

Query: 180 RGTRPISLVAPATASDFSRASKCHLLV 260
           R TRP  LVAPAT ++ + A K   L+
Sbjct: 433 RNTRPTLLVAPATEAEVAEAEKLRDLI 459

>NAGPA_MOUSE (Q8BJ48) N-acetylglucosamine-1-phosphodiester|
           alpha-N-acetylglucosaminidase precursor (EC 3.1.4.45)
           (Phosphodiester alpha-GlcNAcase) (Mannose
           6-phosphate-uncovering enzyme)
          Length = 517

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -1

Query: 176 SKPSTPLRSGEHVRRLLPPRPSAPGSTHSAA 84
           S+    +RSG   +   PP P+ PG++H AA
Sbjct: 48  SRDCARVRSGSPEQESWPPPPTNPGASHHAA 78

>HIW_DROME (Q9NB71) Ubiquitin ligase protein highwire (EC 6.3.2.-) (Protein|
            pam/highwire/rpm-1)
          Length = 5233

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +2

Query: 11   ASIIRHNQPRPHHTHFPSSPTTAHQQQSE 97
            AS+ +HN P PHH      P   H QQ +
Sbjct: 3901 ASLAQHNHPPPHH------PQQQHHQQQQ 3923

>INP5E_HUMAN (Q9NRR6) 72 kDa inositol polyphosphate 5-phosphatase (EC 3.1.3.36)|
           (Phosphatidylinositol-4,5-bisphosphate 5-phosphatase)
           (Phosphatidylinositol polyphosphate 5-phosphatase type
           IV)
          Length = 644

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 6/45 (13%)
 Frame = -1

Query: 191 SGAATSKPSTPLR------SGEHVRRLLPPRPSAPGSTHSAADVL 75
           SG A+S P+ P R      S   +  LLPPRP    S   A+D L
Sbjct: 162 SGVASSSPNLPHRDAAVAGSSPRLPSLLPPRPPPALSLDIASDSL 206

>NGN2_HUMAN (Q9H2A3) Neurogenin 2|
          Length = 272

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 8/54 (14%)
 Frame = +3

Query: 108 SGRARRKQPAHVLAGAQGG---GWFACRGTRPISLV-----APATASDFSRASK 245
           SG ARR++ A    GA+GG   G   CR  R + LV      P+ A   SR +K
Sbjct: 48  SGGARRQRGAEAGQGARGGVAAGAEGCRPARLLGLVHDCKRRPSRARAVSRGAK 101

>CXA12_MOUSE (Q8BQU6) Gap junction alpha-12 protein (Connexin-47) (Cx47)|
          Length = 440

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 14/39 (35%), Positives = 15/39 (38%)
 Frame = -2

Query: 247 HLDAREKSDAVAGATSEIGRVPRQANHPPPCAPASTCAG 131
           HL      DAV G        P     PPPCA  +  AG
Sbjct: 287 HLGLGSAQDAVRGRRGASAAGPGPTPRPPPCAFPAAAAG 325


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,024,330
Number of Sequences: 219361
Number of extensions: 881027
Number of successful extensions: 3045
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2926
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3043
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 1396778976
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)