>ref|NM_184796.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2859

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 52/54 (96%)
 Strand = Plus / Plus

                                                                 
Query: 287 caaccccttcgaggccatctggtcgcgccgcaagttcgacgtgctcggcaagaa 340
           |||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 168 caaccccttcgaggccatctggtcccgccgcaagttcgacgtgctgggcaagaa 221



 Score = 40.1 bits (20), Expect = 4.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 141 atggcgaagacgaagccgatggcagctg 168
           ||||||||||||||||| ||||| ||||
Sbjct: 1   atggcgaagacgaagcccatggcggctg 28

>gb|AY023193.1| Oryza sativa microsatellite MRG5518 containing (GCG)X9, closest to
           marker G1316, genomic sequence
          Length = 227

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 52/54 (96%)
 Strand = Plus / Plus

                                                                 
Query: 287 caaccccttcgaggccatctggtcgcgccgcaagttcgacgtgctcggcaagaa 340
           |||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 139 caaccccttcgaggccatctggtcccgccgcaagttcgacgtgctgggcaagaa 192

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 52/54 (96%)
 Strand = Plus / Minus

                                                                      
Query: 287      caaccccttcgaggccatctggtcgcgccgcaagttcgacgtgctcggcaagaa 340
                |||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 22100266 caaccccttcgaggccatctggtcccgccgcaagttcgacgtgctgggcaagaa 22100213



 Score = 42.1 bits (21), Expect = 1.1
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                 
Query: 136      cggccatggcgaagacgaagccgatggcagctg 168
                |||| ||||||||||||||||| ||||| ||||
Sbjct: 22100438 cggcaatggcgaagacgaagcccatggcggctg 22100406

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 52/54 (96%)
 Strand = Plus / Minus

                                                                      
Query: 287      caaccccttcgaggccatctggtcgcgccgcaagttcgacgtgctcggcaagaa 340
                |||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 22093295 caaccccttcgaggccatctggtcccgccgcaagttcgacgtgctgggcaagaa 22093242



 Score = 42.1 bits (21), Expect = 1.1
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                 
Query: 136      cggccatggcgaagacgaagccgatggcagctg 168
                |||| ||||||||||||||||| ||||| ||||
Sbjct: 22093467 cggcaatggcgaagacgaagcccatggcggctg 22093435

>gb|AC109602.6| Oryza sativa chromosome 3 BAC OSJNBa0087M10 genomic sequence, complete
             sequence
          Length = 167397

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 52/54 (96%)
 Strand = Plus / Plus

                                                                   
Query: 287   caaccccttcgaggccatctggtcgcgccgcaagttcgacgtgctcggcaagaa 340
             |||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 48016 caaccccttcgaggccatctggtcccgccgcaagttcgacgtgctgggcaagaa 48069



 Score = 42.1 bits (21), Expect = 1.1
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 136   cggccatggcgaagacgaagccgatggcagctg 168
             |||| ||||||||||||||||| ||||| ||||
Sbjct: 47844 cggcaatggcgaagacgaagcccatggcggctg 47876

>gb|AC090874.9| Oryza sativa chromosome 3 BAC OJ1523_A02 genomic sequence, complete
              sequence
          Length = 132987

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 52/54 (96%)
 Strand = Plus / Plus

                                                                    
Query: 287    caaccccttcgaggccatctggtcgcgccgcaagttcgacgtgctcggcaagaa 340
              |||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 124614 caaccccttcgaggccatctggtcccgccgcaagttcgacgtgctgggcaagaa 124667



 Score = 42.1 bits (21), Expect = 1.1
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                               
Query: 136    cggccatggcgaagacgaagccgatggcagctg 168
              |||| ||||||||||||||||| ||||| ||||
Sbjct: 124442 cggcaatggcgaagacgaagcccatggcggctg 124474

>dbj|AK068322.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013150A21, full
           insert sequence
          Length = 3259

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 52/54 (96%)
 Strand = Plus / Plus

                                                                 
Query: 287 caaccccttcgaggccatctggtcgcgccgcaagttcgacgtgctcggcaagaa 340
           |||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 104 caaccccttcgaggccatctggtcccgccgcaagttcgacgtgctgggcaagaa 157

>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 171     gcggcctcggcggacaagaaaa 192
               ||||||||||||||||||||||
Sbjct: 4857439 gcggcctcggcggacaagaaaa 4857418

>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome
          Length = 3052398

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 134     ctcggccatggcgaagacgaag 155
               ||||||||||||||||||||||
Sbjct: 1409974 ctcggccatggcgaagacgaag 1409995

>gb|CP000069.1| Trypanosoma brucei chromosome 6, complete sequence
          Length = 1618915

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 187    agaaaacgaacaagaagaaa 206
              ||||||||||||||||||||
Sbjct: 263460 agaaaacgaacaagaagaaa 263479

>gb|AC084046.13| Trypanosoma brucei chromosome 6 clone RPCI93-3D8, complete sequence
          Length = 154240

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 187   agaaaacgaacaagaagaaa 206
             ||||||||||||||||||||
Sbjct: 56607 agaaaacgaacaagaagaaa 56626

>ref|NM_029850.2| Mus musculus B-cell CLL/lymphoma 7A (Bcl7a), mRNA
          Length = 3820

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 194 gaacaagaagaaaggcaagg 213
           ||||||||||||||||||||
Sbjct: 290 gaacaagaagaaaggcaagg 309

>gb|AC144714.4| Mus musculus BAC clone RP24-371M20 from chromosome 8, complete sequence
          Length = 176994

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 194    gaacaagaagaaaggcaagg 213
              ||||||||||||||||||||
Sbjct: 146557 gaacaagaagaaaggcaagg 146538

>gb|BC038481.1| Mus musculus B-cell CLL/lymphoma 7A, mRNA (cDNA clone MGC:47407
           IMAGE:4501205), complete cds
          Length = 3820

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 194 gaacaagaagaaaggcaagg 213
           ||||||||||||||||||||
Sbjct: 290 gaacaagaagaaaggcaagg 309

>gb|BC046777.1| Mus musculus B-cell CLL/lymphoma 7A, mRNA (cDNA clone MGC:61344
           IMAGE:5709511), complete cds
          Length = 2506

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 194 gaacaagaagaaaggcaagg 213
           ||||||||||||||||||||
Sbjct: 195 gaacaagaagaaaggcaagg 214

>gb|AC113504.10| Mus musculus chromosome 5, clone RP23-370G17, complete sequence
          Length = 219617

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 194    gaacaagaagaaaggcaagg 213
              ||||||||||||||||||||
Sbjct: 110587 gaacaagaagaaaggcaagg 110606

>emb|X63462.1|RCHEL R.capsulatus ORF124, helA, helB, helC & ORF52 DNA
          Length = 3272

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 139 ccatggcgaagacgaagccg 158
           ||||||||||||||||||||
Sbjct: 259 ccatggcgaagacgaagccg 240

>gb|BC017640.1| Mus musculus B-cell CLL/lymphoma 7A, mRNA (cDNA clone MGC:28969
           IMAGE:4482250), complete cds
          Length = 2135

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 194 gaacaagaagaaaggcaagg 213
           ||||||||||||||||||||
Sbjct: 279 gaacaagaagaaaggcaagg 298

>dbj|AK157720.1| Mus musculus 9.5 days embryo parthenogenote cDNA, RIKEN full-length
           enriched library, clone:B130008D23 product:B-cell
           CLL/lymphoma 7A, full insert sequence
          Length = 4641

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 194 gaacaagaagaaaggcaagg 213
           ||||||||||||||||||||
Sbjct: 314 gaacaagaagaaaggcaagg 333

>gb|U69979.1|RCU69979 Rhodobacter capsulatus YajC (yajC) gene, partial cds, and SecD (secD)
            and SecF (secF) genes, complete cds
          Length = 3000

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 139  ccatggcgaagacgaagccg 158
            ||||||||||||||||||||
Sbjct: 2755 ccatggcgaagacgaagccg 2736

>dbj|AK086803.1| Mus musculus 0 day neonate lung cDNA, RIKEN full-length enriched
           library, clone:E030001O10 product:B-cell CLL/lymphoma
           7A, full insert sequence
          Length = 3782

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 194 gaacaagaagaaaggcaagg 213
           ||||||||||||||||||||
Sbjct: 362 gaacaagaagaaaggcaagg 381

>dbj|AK044782.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library,
           clone:A930104J06 product:B-cell CLL/lymphoma 7A, full
           insert sequence
          Length = 3754

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 194 gaacaagaagaaaggcaagg 213
           ||||||||||||||||||||
Sbjct: 336 gaacaagaagaaaggcaagg 355

>dbj|AK014498.1| Mus musculus 14 days embryo liver cDNA, RIKEN full-length enriched
           library, clone:4432415N06 product:B-cell CLL/lymphoma
           7A, full insert sequence
          Length = 2515

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 194 gaacaagaagaaaggcaagg 213
           ||||||||||||||||||||
Sbjct: 308 gaacaagaagaaaggcaagg 327

>dbj|AP006619.1| Nocardia farcinica IFM 10152 plasmid pNF1 DNA, complete sequence
          Length = 184026

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 309   tcgcgccgcaagttcgacgt 328
             ||||||||||||||||||||
Sbjct: 76375 tcgcgccgcaagttcgacgt 76356

>emb|Z74475.1|CER04F11 Caenorhabditis elegans Cosmid R04F11, complete sequence
          Length = 32975

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 183  gacaagaaaacgaacaagaagaaa 206
            |||||||||||||| |||||||||
Sbjct: 6598 gacaagaaaacgaagaagaagaaa 6575


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,383,024
Number of Sequences: 3902068
Number of extensions: 1383024
Number of successful extensions: 28932
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 28774
Number of HSP's gapped (non-prelim): 158
length of query: 340
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 318
effective length of database: 17,147,199,772
effective search space: 5452809527496
effective search space used: 5452809527496
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)