Clone Name | bastl12e10 |
---|---|
Clone Library Name | barley_pub |
>gb|BT009009.1| Triticum aestivum clone wdk3c.pk005.b17:fis, full insert mRNA sequence Length = 1620 Score = 601 bits (303), Expect = e-169 Identities = 332/341 (97%), Gaps = 3/341 (0%) Strand = Plus / Plus Query: 8 gcgaccgccacctccgccgactcc---ctccaacctttccccaccatggcgtcgccctcc 64 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 8 gcgaccgccacctccgccgactcctccctccaacctttccccaccatggcgtcgccctcc 67 Query: 65 gtcttcgccgggatcgcccagggcccggaggaccccatcctcggggtgacggtcgcgtac 124 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 68 gtcttcgccgggatcgcgcagggcccggaggaccccatcctcggggtgacggtcgcgtac 127 Query: 125 aacaaggatcccagccccgtcaaggtcaacctcggcgtcggcgcctaccggaccgaggaa 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128 aacaaggatcccagccccgtcaaggtcaacctcggcgtcggcgcctaccggaccgaggaa 187 Query: 185 gggaagcccctcgtgctgaatgtggtcaggcgcgccgagcagatgctgatccataacgag 244 ||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 188 gggaagcccatggtgctgaatgtggtcaggcgcgccgagcagatgctgatccaaaacgag 247 Query: 245 tcacgtgttaaggagtacttgccaatcactggattggccgatttcaacaagttgagtgct 304 ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 248 tcacgtgttaaggagtacttgccgatcactggattggcagatttcaacaagttgagtgct 307 Query: 305 aagcttatcttcggtgctgacagtcctgctattcaggagaa 345 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 308 aagcttatcttcggtgctgacagtcctgctattcaggagaa 348
>dbj|AB110193.1| Oryza sativa (japonica cultivar-group) mRNA for aspartate aminotransferase, complete cds, clone: 22C4AG009 Length = 1502 Score = 424 bits (214), Expect = e-116 Identities = 292/318 (91%) Strand = Plus / Plus Query: 28 ctccctccaacctttccccaccatggcgtcgccctccgtcttcgccgggatcgcccaggg 87 |||||||||| |||||||||||||||||||| | ||||||||||| || |||| |||| Sbjct: 35 ctccctccaagctttccccaccatggcgtcgtcgtccgtcttcgctggcctcgcgcaggc 94 Query: 88 cccggaggaccccatcctcggggtgacggtcgcgtacaacaaggatcccagccccgtcaa 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 95 gccggaggaccccatcctcggggtgacggtcgcgtacaacaaggatcccagccccgtgaa 154 Query: 148 ggtcaacctcggcgtcggcgcctaccggaccgaggaagggaagcccctcgtgctgaatgt 207 |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 155 ggtcaatctcggcgtcggcgcctaccggaccgaggaagggaagcccctggtgctgaatgt 214 Query: 208 ggtcaggcgcgccgagcagatgctgatccataacgagtcacgtgttaaggagtacttgcc 267 |||||||||||| ||||||||||||||| | ||| |||||||||||||||||| ||||| Sbjct: 215 ggtcaggcgcgctgagcagatgctgatcaacaacccgtcacgtgttaaggagtatttgcc 274 Query: 268 aatcactggattggccgatttcaacaagttgagtgctaagcttatcttcggtgctgacag 327 ||||||||| ||||||||||||| ||| |||||||||||||||| || ||||||||||| Sbjct: 275 gatcactggactggccgatttcaataagctgagtgctaagcttatttttggtgctgacag 334 Query: 328 tcctgctattcaggagaa 345 |||||| ||||| ||||| Sbjct: 335 tcctgccattcaagagaa 352
>dbj|D14673.1|RICAAT Oryza sativa (japonica cultivar-group) mRNA for aspartate aminotransferase, complete cds Length = 1514 Score = 424 bits (214), Expect = e-116 Identities = 292/318 (91%) Strand = Plus / Plus Query: 28 ctccctccaacctttccccaccatggcgtcgccctccgtcttcgccgggatcgcccaggg 87 |||||||||| |||||||||||||||||||| | ||||||||||| || |||| |||| Sbjct: 47 ctccctccaagctttccccaccatggcgtcgtcgtccgtcttcgctggcctcgcgcaggc 106 Query: 88 cccggaggaccccatcctcggggtgacggtcgcgtacaacaaggatcccagccccgtcaa 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 107 gccggaggaccccatcctcggggtgacggtcgcgtacaacaaggatcccagccccgtgaa 166 Query: 148 ggtcaacctcggcgtcggcgcctaccggaccgaggaagggaagcccctcgtgctgaatgt 207 |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 167 ggtcaatctcggcgtcggcgcctaccggaccgaggaagggaagcccctggtgctgaatgt 226 Query: 208 ggtcaggcgcgccgagcagatgctgatccataacgagtcacgtgttaaggagtacttgcc 267 |||||||||||| ||||||||||||||| | ||| |||||||||||||||||| ||||| Sbjct: 227 ggtcaggcgcgctgagcagatgctgatcaacaacccgtcacgtgttaaggagtatttgcc 286 Query: 268 aatcactggattggccgatttcaacaagttgagtgctaagcttatcttcggtgctgacag 327 ||||||||| ||||||||||||| ||| |||||||||||||||| || ||||||||||| Sbjct: 287 gatcactggactggccgatttcaataagctgagtgctaagcttatttttggtgctgacag 346 Query: 328 tcctgctattcaggagaa 345 |||||| ||||| ||||| Sbjct: 347 tcctgccattcaagagaa 364
>dbj|AK104829.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-H04, full insert sequence Length = 1519 Score = 424 bits (214), Expect = e-116 Identities = 292/318 (91%) Strand = Plus / Plus Query: 28 ctccctccaacctttccccaccatggcgtcgccctccgtcttcgccgggatcgcccaggg 87 |||||||||| |||||||||||||||||||| | ||||||||||| || |||| |||| Sbjct: 52 ctccctccaagctttccccaccatggcgtcgtcgtccgtcttcgctggcctcgcgcaggc 111 Query: 88 cccggaggaccccatcctcggggtgacggtcgcgtacaacaaggatcccagccccgtcaa 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 112 gccggaggaccccatcctcggggtgacggtcgcgtacaacaaggatcccagccccgtgaa 171 Query: 148 ggtcaacctcggcgtcggcgcctaccggaccgaggaagggaagcccctcgtgctgaatgt 207 |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 172 ggtcaatctcggcgtcggcgcctaccggaccgaggaagggaagcccctggtgctgaatgt 231 Query: 208 ggtcaggcgcgccgagcagatgctgatccataacgagtcacgtgttaaggagtacttgcc 267 |||||||||||| ||||||||||||||| | ||| |||||||||||||||||| ||||| Sbjct: 232 ggtcaggcgcgctgagcagatgctgatcaacaacccgtcacgtgttaaggagtatttgcc 291 Query: 268 aatcactggattggccgatttcaacaagttgagtgctaagcttatcttcggtgctgacag 327 ||||||||| ||||||||||||| ||| |||||||||||||||| || ||||||||||| Sbjct: 292 gatcactggactggccgatttcaataagctgagtgctaagcttatttttggtgctgacag 351 Query: 328 tcctgctattcaggagaa 345 |||||| ||||| ||||| Sbjct: 352 tcctgccattcaagagaa 369
>dbj|AK103586.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133B14, full insert sequence Length = 1888 Score = 424 bits (214), Expect = e-116 Identities = 292/318 (91%) Strand = Plus / Plus Query: 28 ctccctccaacctttccccaccatggcgtcgccctccgtcttcgccgggatcgcccaggg 87 |||||||||| |||||||||||||||||||| | ||||||||||| || |||| |||| Sbjct: 421 ctccctccaagctttccccaccatggcgtcgtcgtccgtcttcgctggcctcgcgcaggc 480 Query: 88 cccggaggaccccatcctcggggtgacggtcgcgtacaacaaggatcccagccccgtcaa 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 481 gccggaggaccccatcctcggggtgacggtcgcgtacaacaaggatcccagccccgtgaa 540 Query: 148 ggtcaacctcggcgtcggcgcctaccggaccgaggaagggaagcccctcgtgctgaatgt 207 |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 541 ggtcaatctcggcgtcggcgcctaccggaccgaggaagggaagcccctggtgctgaatgt 600 Query: 208 ggtcaggcgcgccgagcagatgctgatccataacgagtcacgtgttaaggagtacttgcc 267 |||||||||||| ||||||||||||||| | ||| |||||||||||||||||| ||||| Sbjct: 601 ggtcaggcgcgctgagcagatgctgatcaacaacccgtcacgtgttaaggagtatttgcc 660 Query: 268 aatcactggattggccgatttcaacaagttgagtgctaagcttatcttcggtgctgacag 327 ||||||||| ||||||||||||| ||| |||||||||||||||| || ||||||||||| Sbjct: 661 gatcactggactggccgatttcaataagctgagtgctaagcttatttttggtgctgacag 720 Query: 328 tcctgctattcaggagaa 345 |||||| ||||| ||||| Sbjct: 721 tcctgccattcaagagaa 738
>dbj|AK067557.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013112H20, full insert sequence Length = 1668 Score = 424 bits (214), Expect = e-116 Identities = 292/318 (91%) Strand = Plus / Plus Query: 28 ctccctccaacctttccccaccatggcgtcgccctccgtcttcgccgggatcgcccaggg 87 |||||||||| |||||||||||||||||||| | ||||||||||| || |||| |||| Sbjct: 201 ctccctccaagctttccccaccatggcgtcgtcgtccgtcttcgctggcctcgcgcaggc 260 Query: 88 cccggaggaccccatcctcggggtgacggtcgcgtacaacaaggatcccagccccgtcaa 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 261 gccggaggaccccatcctcggggtgacggtcgcgtacaacaaggatcccagccccgtgaa 320 Query: 148 ggtcaacctcggcgtcggcgcctaccggaccgaggaagggaagcccctcgtgctgaatgt 207 |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 321 ggtcaatctcggcgtcggcgcctaccggaccgaggaagggaagcccctggtgctgaatgt 380 Query: 208 ggtcaggcgcgccgagcagatgctgatccataacgagtcacgtgttaaggagtacttgcc 267 |||||||||||| ||||||||||||||| | ||| |||||||||||||||||| ||||| Sbjct: 381 ggtcaggcgcgctgagcagatgctgatcaacaacccgtcacgtgttaaggagtatttgcc 440 Query: 268 aatcactggattggccgatttcaacaagttgagtgctaagcttatcttcggtgctgacag 327 ||||||||| ||||||||||||| ||| |||||||||||||||| || ||||||||||| Sbjct: 441 gatcactggactggccgatttcaataagctgagtgctaagcttatttttggtgctgacag 500 Query: 328 tcctgctattcaggagaa 345 |||||| ||||| ||||| Sbjct: 501 tcctgccattcaagagaa 518
>dbj|AK103133.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033120D06, full insert sequence Length = 1525 Score = 416 bits (210), Expect = e-113 Identities = 291/318 (91%) Strand = Plus / Plus Query: 28 ctccctccaacctttccccaccatggcgtcgccctccgtcttcgccgggatcgcccaggg 87 |||||||||| ||||||||||| |||||||| | ||||||||||| || |||| |||| Sbjct: 58 ctccctccaagctttccccaccgtggcgtcgtcgtccgtcttcgctggcctcgcgcaggc 117 Query: 88 cccggaggaccccatcctcggggtgacggtcgcgtacaacaaggatcccagccccgtcaa 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 118 gccggaggaccccatcctcggggtgacggtcgcgtacaacaaggatcccagccccgtgaa 177 Query: 148 ggtcaacctcggcgtcggcgcctaccggaccgaggaagggaagcccctcgtgctgaatgt 207 |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 178 ggtcaatctcggcgtcggcgcctaccggaccgaggaagggaagcccctggtgctgaatgt 237 Query: 208 ggtcaggcgcgccgagcagatgctgatccataacgagtcacgtgttaaggagtacttgcc 267 |||||||||||| ||||||||||||||| | ||| |||||||||||||||||| ||||| Sbjct: 238 ggtcaggcgcgctgagcagatgctgatcaacaacccgtcacgtgttaaggagtatttgcc 297 Query: 268 aatcactggattggccgatttcaacaagttgagtgctaagcttatcttcggtgctgacag 327 ||||||||| ||||||||||||| ||| |||||||||||||||| || ||||||||||| Sbjct: 298 gatcactggactggccgatttcaataagctgagtgctaagcttatttttggtgctgacag 357 Query: 328 tcctgctattcaggagaa 345 |||||| ||||| ||||| Sbjct: 358 tcctgccattcaagagaa 375
>dbj|AK099338.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033026J06, full insert sequence Length = 1626 Score = 410 bits (207), Expect = e-111 Identities = 292/319 (91%), Gaps = 1/319 (0%) Strand = Plus / Plus Query: 28 ctccctccaacctttccccaccatggcgtcgccctccgtcttcgccgggatcgcccaggg 87 |||||||||| |||||||||||||||||||| | ||||||||||| || |||| |||| Sbjct: 158 ctccctccaagctttccccaccatggcgtcgtcgtccgtcttcgctggcctcgcgcaggc 217 Query: 88 cccggaggaccccatcctcggggtgacggtcgcgtacaacaaggatcccagccccgtcaa 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 218 gccggaggaccccatcctcggggtgacggtcgcgtacaacaaggatcccagccccgtgaa 277 Query: 148 ggtcaacctcggcgtcggcgcctaccggaccgaggaagggaag-cccctcgtgctgaatg 206 |||||| |||||||||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 278 ggtcaatctcggcgtcggcgcctaccggaccgaggaagggaagccccctggtgctgaatg 337 Query: 207 tggtcaggcgcgccgagcagatgctgatccataacgagtcacgtgttaaggagtacttgc 266 ||||||||||||| ||||||||||||||| | ||| |||||||||||||||||| |||| Sbjct: 338 tggtcaggcgcgctgagcagatgctgatcaacaacccgtcacgtgttaaggagtatttgc 397 Query: 267 caatcactggattggccgatttcaacaagttgagtgctaagcttatcttcggtgctgaca 326 | ||||||||| ||||||||||||| ||| |||||||||||||||| || |||||||||| Sbjct: 398 cgatcactggactggccgatttcaataagctgagtgctaagcttatttttggtgctgaca 457 Query: 327 gtcctgctattcaggagaa 345 ||||||| ||||| ||||| Sbjct: 458 gtcctgccattcaagagaa 476
>ref|XM_463436.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1224 Score = 389 bits (196), Expect = e-105 Identities = 271/296 (91%) Strand = Plus / Plus Query: 50 atggcgtcgccctccgtcttcgccgggatcgcccagggcccggaggaccccatcctcggg 109 ||||||||| | ||||||||||| || |||| |||| ||||||||||||||||||||| Sbjct: 1 atggcgtcgtcgtccgtcttcgctggcctcgcgcaggcgccggaggaccccatcctcggg 60 Query: 110 gtgacggtcgcgtacaacaaggatcccagccccgtcaaggtcaacctcggcgtcggcgcc 169 ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 61 gtgacggtcgcgtacaacaaggatcccagccccgtgaaggtcaatctcggcgtcggcgcc 120 Query: 170 taccggaccgaggaagggaagcccctcgtgctgaatgtggtcaggcgcgccgagcagatg 229 |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 121 taccggaccgaggaagggaagcccctggtgctgaatgtggtcaggcgcgctgagcagatg 180 Query: 230 ctgatccataacgagtcacgtgttaaggagtacttgccaatcactggattggccgatttc 289 |||||| | ||| |||||||||||||||||| ||||| ||||||||| ||||||||||| Sbjct: 181 ctgatcaacaacccgtcacgtgttaaggagtatttgccgatcactggactggccgatttc 240 Query: 290 aacaagttgagtgctaagcttatcttcggtgctgacagtcctgctattcaggagaa 345 || ||| |||||||||||||||| || ||||||||||||||||| ||||| ||||| Sbjct: 241 aataagctgagtgctaagcttatttttggtgctgacagtcctgccattcaagagaa 296
>emb|X63429.1|PMAAT2 P.miliaceum mRNA for aspartate aminotransferase (pcAAT2) Length = 1514 Score = 373 bits (188), Expect = e-100 Identities = 280/311 (90%), Gaps = 6/311 (1%) Strand = Plus / Plus Query: 41 ttccccaccatggcgtcgc------cctccgtcttcgccgggatcgcccagggcccggag 94 ||||||||||||||||||| ||||||||||||| || ||||| |||| ||||||| Sbjct: 38 ttccccaccatggcgtcgcaggtggcctccgtcttcgcaggcatcgcgcaggccccggag 97 Query: 95 gaccccatcctcggggtgacggtcgcgtacaacaaggatcccagccccgtcaaggtcaac 154 ||||||||||||||||||||||| |||| ||||||||||||||||||||| ||| ||||| Sbjct: 98 gaccccatcctcggggtgacggttgcgttcaacaaggatcccagccccgtgaagatcaac 157 Query: 155 ctcggcgtcggcgcctaccggaccgaggaagggaagcccctcgtgctgaatgtggtcagg 214 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 158 ctcggcgtcggcgcctaccggaccgaggaagggaagcccctcgtgctgaatgtggtcagg 217 Query: 215 cgcgccgagcagatgctgatccataacgagtcacgtgttaaggagtacttgccaatcact 274 ||||||||||||||||||||| || || ||| ||||| ||||||||| | ||||||||| Sbjct: 218 cgcgccgagcagatgctgatcaatgacccgtctcgtgtgaaggagtacctaccaatcact 277 Query: 275 ggattggccgatttcaacaagttgagtgctaagcttatcttcggtgctgacagtcctgct 334 || ||||| || | || ||| |||| |||||||||||||||||||||||||| |||||| Sbjct: 278 ggtttggctgaatataataagctgagcgctaagcttatcttcggtgctgacagccctgct 337 Query: 335 attcaggagaa 345 ||||||||||| Sbjct: 338 attcaggagaa 348
>gb|BT016540.1| Zea mays clone Contig373 mRNA sequence Length = 1698 Score = 301 bits (152), Expect = 8e-79 Identities = 271/311 (87%), Gaps = 6/311 (1%) Strand = Plus / Plus Query: 41 ttccccaccatggcgtcgc------cctccgtcttcgccgggatcgcccagggcccggag 94 ||||||||||||||||||| ||||||||||||||| ||| |||| ||||||| Sbjct: 188 ttccccaccatggcgtcgcagggatcctccgtcttcgccgcactcgagcaggccccggag 247 Query: 95 gaccccatcctcggggtgacggtcgcgtacaacaaggatcccagccccgtcaaggtcaac 154 |||||||||||||| ||||| || || ||||||||||||||||||||||| ||||||||| Sbjct: 248 gaccccatcctcggagtgaccgttgcctacaacaaggatcccagccccgtgaaggtcaac 307 Query: 155 ctcggcgtcggcgcctaccggaccgaggaagggaagcccctcgtgctgaatgtggtcagg 214 ||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 308 ctcggggtcggcgcctaccggaccgaggaagggaagcccctagtgctgaacgtggtcagg 367 Query: 215 cgcgccgagcagatgctgatccataacgagtcacgtgttaaggagtacttgccaatcact 274 ||||||||||| ||| ||||| |||| ||||||||| ||||||||| | |||||||| Sbjct: 368 cgcgccgagcaaatgttgatcaataatccgtcacgtgtcaaggagtacctaccaatcacc 427 Query: 275 ggattggccgatttcaacaagttgagtgctaagcttatcttcggtgctgacagtcctgct 334 || |||| || ||||| ||| |||| |||||||||||||| || |||||||| |||||| Sbjct: 428 ggtctggctgaattcaataagctgagcgctaagcttatctttggcgctgacagccctgct 487 Query: 335 attcaggagaa 345 ||||||||||| Sbjct: 488 attcaggagaa 498
>gb|AY103658.1| Zea mays PCO118382 mRNA sequence Length = 1690 Score = 301 bits (152), Expect = 8e-79 Identities = 271/311 (87%), Gaps = 6/311 (1%) Strand = Plus / Plus Query: 41 ttccccaccatggcgtcgc------cctccgtcttcgccgggatcgcccagggcccggag 94 ||||||||||||||||||| ||||||||||||||| ||| |||| ||||||| Sbjct: 213 ttccccaccatggcgtcgcagggatcctccgtcttcgccgcactcgagcaggccccggag 272 Query: 95 gaccccatcctcggggtgacggtcgcgtacaacaaggatcccagccccgtcaaggtcaac 154 |||||||||||||| ||||| || || ||||||||||||||||||||||| ||||||||| Sbjct: 273 gaccccatcctcggagtgaccgttgcctacaacaaggatcccagccccgtgaaggtcaac 332 Query: 155 ctcggcgtcggcgcctaccggaccgaggaagggaagcccctcgtgctgaatgtggtcagg 214 ||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 333 ctcggggtcggcgcctaccggaccgaggaagggaagcccctagtgctgaacgtggtcagg 392 Query: 215 cgcgccgagcagatgctgatccataacgagtcacgtgttaaggagtacttgccaatcact 274 ||||||||||| ||| ||||| |||| ||||||||| ||||||||| | |||||||| Sbjct: 393 cgcgccgagcaaatgttgatcaataatccgtcacgtgtcaaggagtacctaccaatcacc 452 Query: 275 ggattggccgatttcaacaagttgagtgctaagcttatcttcggtgctgacagtcctgct 334 || |||| || ||||| ||| |||| |||||||||||||| || |||||||| |||||| Sbjct: 453 ggtctggctgaattcaataagctgagcgctaagcttatctttggcgctgacagccctgct 512 Query: 335 attcaggagaa 345 ||||||||||| Sbjct: 513 attcaggagaa 523
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 131 bits (66), Expect = 2e-27 Identities = 72/74 (97%) Strand = Plus / Minus Query: 109 ggtgacggtcgcgtacaacaaggatcccagccccgtcaaggtcaacctcggcgtcggcgc 168 |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 31996318 ggtgacggtcgcgtacaacaaggatcccagccccgtgaaggtcaatctcggcgtcggcgc 31996259 Query: 169 ctaccggaccgagg 182 |||||||||||||| Sbjct: 31996258 ctaccggaccgagg 31996245 Score = 111 bits (56), Expect = 2e-21 Identities = 77/84 (91%) Strand = Plus / Minus Query: 244 gtcacgtgttaaggagtacttgccaatcactggattggccgatttcaacaagttgagtgc 303 |||||||||||||||||| ||||| ||||||||| ||||||||||||| ||| ||||||| Sbjct: 31995412 gtcacgtgttaaggagtatttgccgatcactggactggccgatttcaataagctgagtgc 31995353 Query: 304 taagcttatcttcggtgctgacag 327 ||||||||| || ||||||||||| Sbjct: 31995352 taagcttatttttggtgctgacag 31995329 Score = 95.6 bits (48), Expect = 9e-17 Identities = 75/84 (89%) Strand = Plus / Minus Query: 28 ctccctccaacctttccccaccatggcgtcgccctccgtcttcgccgggatcgcccaggg 87 |||||||||| |||||||||||||||||||| | ||||||||||| || |||| |||| Sbjct: 31996528 ctccctccaagctttccccaccatggcgtcgtcgtccgtcttcgctggcctcgcgcaggc 31996469 Query: 88 cccggaggaccccatcctcggggt 111 ||||||||||||||||||||||| Sbjct: 31996468 gccggaggaccccatcctcggggt 31996445 Score = 95.6 bits (48), Expect = 9e-17 Identities = 54/56 (96%) Strand = Plus / Minus Query: 180 aggaagggaagcccctcgtgctgaatgtggtcaggcgcgccgagcagatgctgatc 235 |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct: 31996145 aggaagggaagcccctggtgctgaatgtggtcaggcgcgctgagcagatgctgatc 31996090
>dbj|AP003274.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0512C01 Length = 176261 Score = 131 bits (66), Expect = 2e-27 Identities = 72/74 (97%) Strand = Plus / Minus Query: 109 ggtgacggtcgcgtacaacaaggatcccagccccgtcaaggtcaacctcggcgtcggcgc 168 |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 38132 ggtgacggtcgcgtacaacaaggatcccagccccgtgaaggtcaatctcggcgtcggcgc 38073 Query: 169 ctaccggaccgagg 182 |||||||||||||| Sbjct: 38072 ctaccggaccgagg 38059 Score = 111 bits (56), Expect = 2e-21 Identities = 77/84 (91%) Strand = Plus / Minus Query: 244 gtcacgtgttaaggagtacttgccaatcactggattggccgatttcaacaagttgagtgc 303 |||||||||||||||||| ||||| ||||||||| ||||||||||||| ||| ||||||| Sbjct: 37226 gtcacgtgttaaggagtatttgccgatcactggactggccgatttcaataagctgagtgc 37167 Query: 304 taagcttatcttcggtgctgacag 327 ||||||||| || ||||||||||| Sbjct: 37166 taagcttatttttggtgctgacag 37143 Score = 95.6 bits (48), Expect = 9e-17 Identities = 75/84 (89%) Strand = Plus / Minus Query: 28 ctccctccaacctttccccaccatggcgtcgccctccgtcttcgccgggatcgcccaggg 87 |||||||||| |||||||||||||||||||| | ||||||||||| || |||| |||| Sbjct: 38342 ctccctccaagctttccccaccatggcgtcgtcgtccgtcttcgctggcctcgcgcaggc 38283 Query: 88 cccggaggaccccatcctcggggt 111 ||||||||||||||||||||||| Sbjct: 38282 gccggaggaccccatcctcggggt 38259 Score = 95.6 bits (48), Expect = 9e-17 Identities = 54/56 (96%) Strand = Plus / Minus Query: 180 aggaagggaagcccctcgtgctgaatgtggtcaggcgcgccgagcagatgctgatc 235 |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct: 37959 aggaagggaagcccctggtgctgaatgtggtcaggcgcgctgagcagatgctgatc 37904
>dbj|AP003256.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0460E08 Length = 170021 Score = 131 bits (66), Expect = 2e-27 Identities = 72/74 (97%) Strand = Plus / Minus Query: 109 ggtgacggtcgcgtacaacaaggatcccagccccgtcaaggtcaacctcggcgtcggcgc 168 |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 93045 ggtgacggtcgcgtacaacaaggatcccagccccgtgaaggtcaatctcggcgtcggcgc 92986 Query: 169 ctaccggaccgagg 182 |||||||||||||| Sbjct: 92985 ctaccggaccgagg 92972 Score = 111 bits (56), Expect = 2e-21 Identities = 77/84 (91%) Strand = Plus / Minus Query: 244 gtcacgtgttaaggagtacttgccaatcactggattggccgatttcaacaagttgagtgc 303 |||||||||||||||||| ||||| ||||||||| ||||||||||||| ||| ||||||| Sbjct: 92139 gtcacgtgttaaggagtatttgccgatcactggactggccgatttcaataagctgagtgc 92080 Query: 304 taagcttatcttcggtgctgacag 327 ||||||||| || ||||||||||| Sbjct: 92079 taagcttatttttggtgctgacag 92056 Score = 95.6 bits (48), Expect = 9e-17 Identities = 75/84 (89%) Strand = Plus / Minus Query: 28 ctccctccaacctttccccaccatggcgtcgccctccgtcttcgccgggatcgcccaggg 87 |||||||||| |||||||||||||||||||| | ||||||||||| || |||| |||| Sbjct: 93255 ctccctccaagctttccccaccatggcgtcgtcgtccgtcttcgctggcctcgcgcaggc 93196 Query: 88 cccggaggaccccatcctcggggt 111 ||||||||||||||||||||||| Sbjct: 93195 gccggaggaccccatcctcggggt 93172 Score = 95.6 bits (48), Expect = 9e-17 Identities = 54/56 (96%) Strand = Plus / Minus Query: 180 aggaagggaagcccctcgtgctgaatgtggtcaggcgcgccgagcagatgctgatc 235 |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct: 92872 aggaagggaagcccctggtgctgaatgtggtcaggcgcgctgagcagatgctgatc 92817
>dbj|D25322.1|PNIAATA Panicum miliaceum gene for cytosolic aspartate aminotransferase, complete cds Length = 7822 Score = 115 bits (58), Expect = 1e-22 Identities = 70/74 (94%) Strand = Plus / Plus Query: 109 ggtgacggtcgcgtacaacaaggatcccagccccgtcaaggtcaacctcggcgtcggcgc 168 ||||||||| |||| ||||||||||||||||||||| ||| ||||||||||||||||||| Sbjct: 2526 ggtgacggttgcgttcaacaaggatcccagccccgtgaagatcaacctcggcgtcggcgc 2585 Query: 169 ctaccggaccgagg 182 |||||||||||||| Sbjct: 2586 ctaccggaccgagg 2599 Score = 111 bits (56), Expect = 2e-21 Identities = 56/56 (100%) Strand = Plus / Plus Query: 180 aggaagggaagcccctcgtgctgaatgtggtcaggcgcgccgagcagatgctgatc 235 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2700 aggaagggaagcccctcgtgctgaatgtggtcaggcgcgccgagcagatgctgatc 2755 Score = 75.8 bits (38), Expect = 8e-11 Identities = 67/77 (87%), Gaps = 6/77 (7%) Strand = Plus / Plus Query: 41 ttccccaccatggcgtcgc------cctccgtcttcgccgggatcgcccagggcccggag 94 ||||||||||||||||||| ||||||||||||| || ||||| |||| ||||||| Sbjct: 2335 ttccccaccatggcgtcgcaggtggcctccgtcttcgcaggcatcgcgcaggccccggag 2394 Query: 95 gaccccatcctcggggt 111 ||||||||||||||||| Sbjct: 2395 gaccccatcctcggggt 2411 Score = 71.9 bits (36), Expect = 1e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 248 cgtgttaaggagtacttgccaatcactggattggccgatttcaacaagttgagtgctaag 307 ||||| ||||||||| | ||||||||||| ||||| || | || ||| |||| |||||| Sbjct: 3407 cgtgtgaaggagtacctaccaatcactggtttggctgaatataataagctgagcgctaag 3466 Query: 308 cttatcttcggtgctgacag 327 |||||||||||||||||||| Sbjct: 3467 cttatcttcggtgctgacag 3486
>gb|M92094.1|LUPAATP1A L.angustifolius aspartate aminotransferase P1 (AAT-P1) mRNA, complete cds Length = 1454 Score = 73.8 bits (37), Expect = 3e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 281 gccgatttcaacaagttgagtgctaagcttatcttcggtgctgacagtcctgctattcag 340 |||||||||||||| |||||||||| ||| || || ||||||||||| ||||||||||| Sbjct: 307 gccgatttcaacaaattgagtgctaggctcatttttggtgctgacagccctgctattcaa 366 Query: 341 gagaa 345 ||||| Sbjct: 367 gagaa 371
>emb|X61577.1|MSAAT1MR M.sativa aat-1 mRNA for aspartate aminotransferase Length = 1514 Score = 67.9 bits (34), Expect = 2e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 284 gatttcaacaagttgagtgctaagcttatcttcggtgctgacagtcctgctattcaggag 343 ||||| ||||| ||||||||||||||||| || ||||| ||||| ||||||||||| ||| Sbjct: 266 gattttaacaaattgagtgctaagcttatttttggtgcagacagccctgctattcaagag 325 Query: 344 aa 345 || Sbjct: 326 aa 327 Score = 42.1 bits (21), Expect = 1.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 101 atcctcggggtgacggtcgcgtacaacaaggatcccagccc 141 |||||||| || || ||||| |||||||||||||| ||||| Sbjct: 83 atcctcggtgtaactgtcgcttacaacaaggatccaagccc 123
>emb|X94184.1|LJAAT L.japonicus mRNA for aspartate aminotransferase Length = 1753 Score = 60.0 bits (30), Expect = 5e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 296 ttgagtgctaagcttatcttcggtgctgacagtcctgctattcaggagaa 345 |||||||| |||||||| || ||||||||||| ||||||||||| ||||| Sbjct: 365 ttgagtgccaagcttatttttggtgctgacagccctgctattcaagagaa 414 Score = 46.1 bits (23), Expect = 0.074 Identities = 89/111 (80%) Strand = Plus / Plus Query: 104 ctcggggtgacggtcgcgtacaacaaggatcccagccccgtcaaggtcaacctcggcgtc 163 ||||||||||| ||||| | |||||| ||||| ||||| || ||| ||||| | || || Sbjct: 173 ctcggggtgactgtcgctttcaacaaagatcctagccctgttaagctcaacttgggtgtt 232 Query: 164 ggcgcctaccggaccgaggaagggaagcccctcgtgctgaatgtggtcagg 214 || || ||||| || |||||||| || || || || |||||||||||||| Sbjct: 233 ggtgcttaccgaactgaggaaggaaaacctcttgttttgaatgtggtcagg 283
>emb|X63430.1|PMAAT3 P.miliaceum mRNA for aspartate aminotransferase (pmAAT3) Length = 1659 Score = 60.0 bits (30), Expect = 5e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 140 cccgtcaaggtcaacctcggcgtcggcgcctaccggaccgaggaagggaagcccctcgtg 199 |||| |||||||||| |||||||||||||||||||| ||| | || |||||||||||| Sbjct: 252 cccgacaaggtcaacgtcggcgtcggcgcctaccgggacgacaacggcaagcccctcgtg 311 Query: 200 ct 201 || Sbjct: 312 ct 313
>gb|AF419301.1|AF419301 Securigera parviflora aspartate aminotransferase (CRAAT1) mRNA, partial cds Length = 1279 Score = 60.0 bits (30), Expect = 5e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 296 ttgagtgctaagcttatcttcggtgctgacagtcctgctattcaggagaa 345 |||||||||||||| || || ||||||||||| ||||||||||| ||||| Sbjct: 51 ttgagtgctaagctaatttttggtgctgacagccctgctattcaagagaa 100
>ref|NM_121190.2| Arabidopsis thaliana ASP3 (ASPARTATE AMINOTRANSFERASE 3) AT5G11520 (ASP3) mRNA, complete cds Length = 1561 Score = 56.0 bits (28), Expect = 8e-05 Identities = 61/72 (84%) Strand = Plus / Plus Query: 274 tggattggccgatttcaacaagttgagtgctaagcttatcttcggtgctgacagtcctgc 333 |||||||| || ||||||||||| || |||||||| || | || |||||||||||||| Sbjct: 394 tggattggttgagttcaacaagttaagcgctaagctcatactaggcgctgacagtcctgc 453 Query: 334 tattcaggagaa 345 ||||| |||||| Sbjct: 454 tattcgggagaa 465
>ref|NM_121960.3| Arabidopsis thaliana ASP2 (ASPARTATE AMINOTRANSFERASE 2) AT5G19550 (ASP2) mRNA, complete cds Length = 1535 Score = 56.0 bits (28), Expect = 8e-05 Identities = 46/52 (88%) Strand = Plus / Plus Query: 282 ccgatttcaacaagttgagtgctaagcttatcttcggtgctgacagtcctgc 333 ||||||| |||||||| || || ||||| ||||| ||||||||||||||||| Sbjct: 322 ccgattttaacaagttaagcgccaagctcatcttaggtgctgacagtcctgc 373 Score = 40.1 bits (20), Expect = 4.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 161 gtcggcgcctaccggaccgaggaagggaagcc 192 ||||| |||||||| || |||||||||||||| Sbjct: 201 gtcggtgcctaccgaactgaggaagggaagcc 232
>gb|AY079310.1| Arabidopsis thaliana putative aspartate aminotransferase ASP3 (At5g11520) mRNA, complete cds Length = 1381 Score = 56.0 bits (28), Expect = 8e-05 Identities = 61/72 (84%) Strand = Plus / Plus Query: 274 tggattggccgatttcaacaagttgagtgctaagcttatcttcggtgctgacagtcctgc 333 |||||||| || ||||||||||| || |||||||| || | || |||||||||||||| Sbjct: 351 tggattggttgagttcaacaagttaagcgctaagctcatactaggcgctgacagtcctgc 410 Query: 334 tattcaggagaa 345 ||||| |||||| Sbjct: 411 tattcgggagaa 422
>emb|X63428.1|PMAAT1 P.miliaceum mRNA for aspartate aminotransferase (pmAAT1) Length = 1677 Score = 56.0 bits (28), Expect = 8e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 140 cccgtcaaggtcaacctcggcgtcggcgcctaccgg 175 |||| |||||||||| |||||||||||||||||||| Sbjct: 252 cccgacaaggtcaacgtcggcgtcggcgcctaccgg 287
>gb|AY050765.1| Arabidopsis thaliana putative aspartate aminotransferase Asp3 (At5g11520) mRNA, complete cds Length = 1567 Score = 56.0 bits (28), Expect = 8e-05 Identities = 61/72 (84%) Strand = Plus / Plus Query: 274 tggattggccgatttcaacaagttgagtgctaagcttatcttcggtgctgacagtcctgc 333 |||||||| || ||||||||||| || |||||||| || | || |||||||||||||| Sbjct: 394 tggattggttgagttcaacaagttaagcgctaagctcatactaggcgctgacagtcctgc 453 Query: 334 tattcaggagaa 345 ||||| |||||| Sbjct: 454 tattcgggagaa 465
>emb|BX829537.1|CNS09ZWQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB19ZF03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1486 Score = 56.0 bits (28), Expect = 8e-05 Identities = 46/52 (88%) Strand = Plus / Plus Query: 282 ccgatttcaacaagttgagtgctaagcttatcttcggtgctgacagtcctgc 333 ||||||| |||||||| || || ||||| ||||| ||||||||||||||||| Sbjct: 316 ccgattttaacaagttaagcgccaagctcatcttaggtgctgacagtcctgc 367 Score = 40.1 bits (20), Expect = 4.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 161 gtcggcgcctaccggaccgaggaagggaagcc 192 ||||| |||||||| || |||||||||||||| Sbjct: 195 gtcggtgcctaccgaactgaggaagggaagcc 226
>gb|AF034210.1|AF034210 Glycine max aspartate aminotransferase glyoxysomal isozyme AAT1 precursor and aspartate aminotransferase cytosolic isozyme AAT2 (AAT) mRNA, complete cds Length = 1690 Score = 56.0 bits (28), Expect = 8e-05 Identities = 40/44 (90%) Strand = Plus / Plus Query: 296 ttgagtgctaagcttatcttcggtgctgacagtcctgctattca 339 ||||||||||||||||| || || |||||||| ||||||||||| Sbjct: 545 ttgagtgctaagcttatttttggggctgacagccctgctattca 588
>gb|U15034.1|ATU15034 Arabidopsis thaliana aspartate aminotransferase (Asp3) mRNA, complete cds Length = 1548 Score = 56.0 bits (28), Expect = 8e-05 Identities = 61/72 (84%) Strand = Plus / Plus Query: 274 tggattggccgatttcaacaagttgagtgctaagcttatcttcggtgctgacagtcctgc 333 |||||||| || ||||||||||| || |||||||| || | || |||||||||||||| Sbjct: 394 tggattggttgagttcaacaagttaagcgctaagctcatactaggcgctgacagtcctgc 453 Query: 334 tattcaggagaa 345 ||||| |||||| Sbjct: 454 tattcgggagaa 465
>gb|U15033.1|ATU15033 Arabidopsis thaliana aspartate aminotransferase (Asp2) mRNA, complete cds Length = 1515 Score = 56.0 bits (28), Expect = 8e-05 Identities = 46/52 (88%) Strand = Plus / Plus Query: 282 ccgatttcaacaagttgagtgctaagcttatcttcggtgctgacagtcctgc 333 ||||||| |||||||| || || ||||| ||||| ||||||||||||||||| Sbjct: 316 ccgattttaacaagttaagcgccaagctcatcttaggtgctgacagtcctgc 367 Score = 40.1 bits (20), Expect = 4.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 161 gtcggcgcctaccggaccgaggaagggaagcc 192 ||||| |||||||| || |||||||||||||| Sbjct: 195 gtcggtgcctaccgaactgaggaagggaagcc 226
>emb|BX831166.1|CNS0A1QT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS63ZF05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1514 Score = 54.0 bits (27), Expect = 3e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 274 tggattggccgatttcaacaagttgagtgctaagcttatcttcggtgctgacagtcctgc 333 |||||||| || |||||| ||||||| |||||||| || | || |||||||||||||| Sbjct: 367 tggattggttgagttcaacgagttgagcgctaagctcatactaggcgctgacagtcctgc 426 Query: 334 tattcaggaga 344 ||||| ||||| Sbjct: 427 tattcgggaga 437
>gb|L23875.1|LUPASPAMP1 Lupinus angustifolius aspartate aminotransferase-P1 gene, complete cds Length = 5989 Score = 54.0 bits (27), Expect = 3e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 281 gccgatttcaacaagttgagtgctaagcttatcttcggtgctgacag 327 |||||||||||||| |||||||||| ||| || || ||||||||||| Sbjct: 3043 gccgatttcaacaaattgagtgctaggctcatttttggtgctgacag 3089
>dbj|AK107623.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-131-D06, full insert sequence Length = 1387 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Plus Query: 145 caaggtcaacctcggcgtcggcgcctaccg 174 |||| ||||||||||||||||||||||||| Sbjct: 219 caagatcaacctcggcgtcggcgcctaccg 248
>dbj|AK070560.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062F07, full insert sequence Length = 1765 Score = 50.1 bits (25), Expect = 0.005 Identities = 34/37 (91%) Strand = Plus / Plus Query: 139 ccccgtcaaggtcaacctcggcgtcggcgcctaccgg 175 ||||| ||| |||||| |||||||||||||||||||| Sbjct: 325 ccccgacaaagtcaacgtcggcgtcggcgcctaccgg 361
>gb|L25334.1|ALFAAT1A Medicago sativa aspartate aminotransferase (AAT1) gene, complete cds Length = 5474 Score = 48.1 bits (24), Expect = 0.019 Identities = 39/44 (88%) Strand = Plus / Plus Query: 284 gatttcaacaagttgagtgctaagcttatcttcggtgctgacag 327 ||||| ||||| ||||||||||||||||| || ||||| ||||| Sbjct: 2128 gattttaacaaattgagtgctaagcttatttttggtgcagacag 2171
>emb|AL939117.1|SCO939117 Streptomyces coelicolor A3(2) complete genome; segment 14/29 Length = 309050 Score = 46.1 bits (23), Expect = 0.074 Identities = 23/23 (100%) Strand = Plus / Plus Query: 63 ccgtcttcgccgggatcgcccag 85 ||||||||||||||||||||||| Sbjct: 20887 ccgtcttcgccgggatcgcccag 20909
>emb|Z22606.1|SLATPSYNA S.lividans i protein and ATP synthase genes Length = 8560 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Minus Query: 52 ggcgtcgccctccgtcttcgcc 73 |||||||||||||||||||||| Sbjct: 8155 ggcgtcgccctccgtcttcgcc 8134
>emb|AL939123.1|SCO939123 Streptomyces coelicolor A3(2) complete genome; segment 20/29 Length = 300100 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Minus Query: 52 ggcgtcgccctccgtcttcgcc 73 |||||||||||||||||||||| Sbjct: 163640 ggcgtcgccctccgtcttcgcc 163619
>gb|AF296830.1|T20D1 Arabidopsis thaliana BAC T20D1 Length = 35369 Score = 44.1 bits (22), Expect = 0.29 Identities = 40/46 (86%) Strand = Plus / Plus Query: 282 ccgatttcaacaagttgagtgctaagcttatcttcggtgctgacag 327 ||||||| |||||||| || || ||||| ||||| ||||||||||| Sbjct: 23269 ccgattttaacaagttaagcgccaagctcatcttaggtgctgacag 23314
>gb|AC140005.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJA1004C08, complete sequence Length = 138054 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 39 ctttccccaccatggcgtcgc 59 ||||||||||||||||||||| Sbjct: 84299 ctttccccaccatggcgtcgc 84319
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 145 caaggtcaacctcggcgtcgg 165 ||||||||||||||||||||| Sbjct: 2633242 caaggtcaacctcggcgtcgg 2633262
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 39 ctttccccaccatggcgtcgc 59 ||||||||||||||||||||| Sbjct: 1859437 ctttccccaccatggcgtcgc 1859457
>ref|XM_949961.1| Theileria annulata strain Ankara hypothetical protein (TA04165) partial mRNA Length = 5094 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 193 cctcgtgctgaatgtggtcag 213 ||||||||||||||||||||| Sbjct: 4021 cctcgtgctgaatgtggtcag 4001
>gb|AC099399.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1006F06, complete sequence Length = 122218 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 39 ctttccccaccatggcgtcgc 59 ||||||||||||||||||||| Sbjct: 115974 ctttccccaccatggcgtcgc 115954
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 39 ctttccccaccatggcgtcgc 59 ||||||||||||||||||||| Sbjct: 1859435 ctttccccaccatggcgtcgc 1859455
>gb|AY081847.1| Aspergillus niger monosaccharide transporter (mstC) gene, complete cds Length = 3698 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 91 ggaggaccccatcctcggggt 111 ||||||||||||||||||||| Sbjct: 1105 ggaggaccccatcctcggggt 1085
>dbj|AK073032.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023146H06, full insert sequence Length = 1512 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 39 ctttccccaccatggcgtcgc 59 ||||||||||||||||||||| Sbjct: 77 ctttccccaccatggcgtcgc 97
>gb|BT016777.1| Zea mays clone Contig610 mRNA sequence Length = 1715 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 tcggcgtcggcgcctaccgg 175 |||||||||||||||||||| Sbjct: 329 tcggcgtcggcgcctaccgg 348
>gb|BC046153.2| Homo sapiens postmeiotic segregation increased 2-like 3, mRNA (cDNA clone IMAGE:5528836) Length = 1058 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 ccgccacctccgccgactccctcc 35 |||||||||| ||||||||||||| Sbjct: 246 ccgccacctcagccgactccctcc 223
>gb|BC007683.1| Homo sapiens postmeiotic segregation increased 2-like 3, mRNA (cDNA clone IMAGE:3637150), containing frame-shift errors Length = 1350 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 ccgccacctccgccgactccctcc 35 |||||||||| ||||||||||||| Sbjct: 91 ccgccacctcagccgactccctcc 68
>gb|CP000017.1| Streptococcus pyogenes MGAS5005, complete genome Length = 1838554 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 ccgccacctccgccgactcc 31 |||||||||||||||||||| Sbjct: 1205878 ccgccacctccgccgactcc 1205897
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 3 cagcagcgaccgccacctccgccg 26 ||||||||||||| |||||||||| Sbjct: 2027472 cagcagcgaccgcgacctccgccg 2027495
>gb|CP000003.1| Streptococcus pyogenes MGAS10394, complete genome Length = 1899877 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 ccgccacctccgccgactcc 31 |||||||||||||||||||| Sbjct: 1258976 ccgccacctccgccgactcc 1258995
>ref|XM_423745.1| PREDICTED: Gallus gallus similar to SI:bZ6L08.1 (novel protein similar to human cadherin, EGF LAG seven-pass G-type receptor (CELSR)) (LOC426068), mRNA Length = 2715 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 cctccgtcttcgccgggatc 79 |||||||||||||||||||| Sbjct: 2254 cctccgtcttcgccgggatc 2273
>ref|NM_001003686.1| Homo sapiens postmeiotic segregation increased 2-like 3 (PMS2L3), transcript variant 2, mRNA Length = 1334 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 ccgccacctccgccgactccctcc 35 |||||||||| ||||||||||||| Sbjct: 200 ccgccacctcagccgactccctcc 177
>gb|AE006585.1| Streptococcus pyogenes M1 GAS, section 114 of 167 of the complete genome Length = 10029 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 ccgccacctccgccgactcc 31 |||||||||||||||||||| Sbjct: 4573 ccgccacctccgccgactcc 4592
>gb|AC146228.2| Pan troglodytes BAC clone RP43-32P14 from 7, complete sequence Length = 221091 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 12 ccgccacctccgccgactccctcc 35 |||||||||| ||||||||||||| Sbjct: 24011 ccgccacctcagccgactccctcc 24034
>gb|CP000262.1| Streptococcus pyogenes MGAS10750, complete genome Length = 1937111 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 ccgccacctccgccgactcc 31 |||||||||||||||||||| Sbjct: 1283227 ccgccacctccgccgactcc 1283246
>gb|CP000261.1| Streptococcus pyogenes MGAS2096, complete genome Length = 1860355 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 ccgccacctccgccgactcc 31 |||||||||||||||||||| Sbjct: 1224268 ccgccacctccgccgactcc 1224287
>gb|CP000260.1| Streptococcus pyogenes MGAS10270, complete genome Length = 1928252 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 ccgccacctccgccgactcc 31 |||||||||||||||||||| Sbjct: 1223341 ccgccacctccgccgactcc 1223360
>gb|CP000259.1| Streptococcus pyogenes MGAS9429, complete genome Length = 1836467 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 ccgccacctccgccgactcc 31 |||||||||||||||||||| Sbjct: 1200358 ccgccacctccgccgactcc 1200377
>ref|NM_005395.2| Homo sapiens postmeiotic segregation increased 2-like 3 (PMS2L3), transcript variant 1, mRNA Length = 1329 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 ccgccacctccgccgactccctcc 35 |||||||||| ||||||||||||| Sbjct: 200 ccgccacctcagccgactccctcc 177
>gb|AC129079.5| Mus musculus BAC clone RP24-126J17 from chromosome 7, complete sequence Length = 180663 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 gcccagggcccggaggaccc 99 |||||||||||||||||||| Sbjct: 74806 gcccagggcccggaggaccc 74787
>gb|AC142303.1| Pan troglodytes BAC clone RP43-129L21 from 7, complete sequence Length = 199670 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 12 ccgccacctccgccgactccctcc 35 |||||||||| ||||||||||||| Sbjct: 125380 ccgccacctcagccgactccctcc 125403
>gb|CP000056.1| Streptococcus pyogenes MGAS6180, complete genome Length = 1897573 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 ccgccacctccgccgactcc 31 |||||||||||||||||||| Sbjct: 1195757 ccgccacctccgccgactcc 1195776
>gb|BC029646.1| Homo sapiens cDNA clone IMAGE:4414833, **** WARNING: chimeric clone **** Length = 1335 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 ccgccacctccgccgactccctcc 35 |||||||||| ||||||||||||| Sbjct: 187 ccgccacctcagccgactccctcc 164
>emb|AL356976.30| Human DNA sequence from clone RP4-700P11 on chromosome 1p32.1-32.3 Contains the gene for glutathione peroxidase 6 (GPX6) and the 5' end of gene MGC52498, complete sequence Length = 64323 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 326 agtcctgctattcaggagaa 345 |||||||||||||||||||| Sbjct: 47527 agtcctgctattcaggagaa 47508
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 46 caccatggcgtcgccctccgtctt 69 ||||||||||||||||| |||||| Sbjct: 414683 caccatggcgtcgccctgcgtctt 414706
>emb|BX046201.1|CNS097T9 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC2DA08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 962 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ttcaacaagttgagtgctaa 306 |||||||||||||||||||| Sbjct: 89 ttcaacaagttgagtgctaa 70
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 214 gcgcgccgagcagatgctgatcca 237 ||||||||||||||||||| |||| Sbjct: 4149582 gcgcgccgagcagatgctgctcca 4149559
>emb|CR621744.1| full-length cDNA clone CS0DL002YD18 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1490 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 ccgccacctccgccgactccctcc 35 |||||||||| ||||||||||||| Sbjct: 259 ccgccacctcagccgactccctcc 236
>gb|AE010068.1| Streptococcus pyogenes strain MGAS8232, section 116 of 173 of the complete genome Length = 13139 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 ccgccacctccgccgactcc 31 |||||||||||||||||||| Sbjct: 7670 ccgccacctccgccgactcc 7689
>gb|AC018720.5| Homo sapiens chromosome 7 clone CTD-2562F8, complete sequence Length = 134979 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 ccgccacctccgccgactccctcc 35 |||||||||| ||||||||||||| Sbjct: 52168 ccgccacctcagccgactccctcc 52145
>gb|AY426608.1| Gallus gallus flamingo 1 mRNA, partial cds Length = 2918 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 cctccgtcttcgccgggatc 79 |||||||||||||||||||| Sbjct: 2854 cctccgtcttcgccgggatc 2873
>gb|BC014421.1| Homo sapiens postmeiotic segregation increased 2-like 3, mRNA (cDNA clone IMAGE:4548072), with apparent retained intron Length = 1423 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 ccgccacctccgccgactccctcc 35 |||||||||| ||||||||||||| Sbjct: 119 ccgccacctcagccgactccctcc 96
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 220 cgagcagatgctgatccata 239 |||||||||||||||||||| Sbjct: 13390036 cgagcagatgctgatccata 13390055
>gb|AC147785.3| Pan troglodytes BAC clone RP43-147G4 from chromosome 7, complete sequence Length = 166701 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 12 ccgccacctccgccgactccctcc 35 |||||||||| ||||||||||||| Sbjct: 15682 ccgccacctcagccgactccctcc 15705
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 ccgtcttcgccgggatcgcc 82 |||||||||||||||||||| Sbjct: 1686562 ccgtcttcgccgggatcgcc 1686581
>gb|AE014074.1| Streptococcus pyogenes MGAS315, complete genome Length = 1900521 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 ccgccacctccgccgactcc 31 |||||||||||||||||||| Sbjct: 1198961 ccgccacctccgccgactcc 1198980
>gb|AC093135.2| Pan troglodytes clone RP43-100O17, complete sequence Length = 172105 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 12 ccgccacctccgccgactccctcc 35 |||||||||| ||||||||||||| Sbjct: 24849 ccgccacctcagccgactccctcc 24872
>dbj|BA000034.2| Streptococcus pyogenes SSI-1 DNA, complete genome Length = 1894275 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 ccgccacctccgccgactcc 31 |||||||||||||||||||| Sbjct: 697923 ccgccacctccgccgactcc 697904
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 145 caaggtcaacctcggcgtcggcgcctac 172 ||||||| ||||||||||||||| |||| Sbjct: 293221 caaggtcgacctcggcgtcggcgtctac 293194
>dbj|AP003952.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1294_G12 Length = 121979 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 220 cgagcagatgctgatccata 239 |||||||||||||||||||| Sbjct: 51468 cgagcagatgctgatccata 51487
>dbj|AP003506.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0428A03 Length = 136799 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 220 cgagcagatgctgatccata 239 |||||||||||||||||||| Sbjct: 1460 cgagcagatgctgatccata 1479
>gb|AC158480.1| Postia placenta clone JGIACWS-9K23, complete sequence Length = 33308 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 146 aaggtcaacctcggcgtcgg 165 |||||||||||||||||||| Sbjct: 12254 aaggtcaacctcggcgtcgg 12273 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,049,520 Number of Sequences: 3902068 Number of extensions: 2049520 Number of successful extensions: 37239 Number of sequences better than 10.0: 85 Number of HSP's better than 10.0 without gapping: 85 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 36784 Number of HSP's gapped (non-prelim): 450 length of query: 345 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 323 effective length of database: 17,147,199,772 effective search space: 5538545526356 effective search space used: 5538545526356 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)