>ANKS1_HUMAN (Q92625) Ankyrin repeat and SAM domain-containing protein 1A (Odin)|
          Length = 1133

 Score = 35.8 bits (81), Expect = 0.025
 Identities = 19/39 (48%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
 Frame = +3

Query: 120 RRHGRL--PGAPARERGFGVASSHRRAKSWRRPPLLEAP 230
           RRH  L  P AP+R   F +   HR AK   RPP L AP
Sbjct: 882 RRHDSLHDPAAPSRAERFRIQEEHREAKLTLRPPSLAAP 920

>PACC_EMENI (Q00202) pH-response transcription factor pacC/RIM101|
          Length = 678

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 26/89 (29%), Positives = 34/89 (38%), Gaps = 16/89 (17%)
 Frame = -2

Query: 370 LEDGAVAPVIDPVRAEQPQS---IGQVTRLTQP-------------LNLQVHVGTRGPVW 239
           + + AVAPV  P   EQP S     QVT +T P              + Q +     PV 
Sbjct: 5   MAEEAVAPVAVPTTQEQPTSQPAAAQVTTVTSPSVTATAAAATAAVASPQANGNAASPVA 64

Query: 238 RFLGASRRGGRLQDLARRCEDATPNPRSL 152
                SR    L  + + C +  P P SL
Sbjct: 65  PASSTSRPAEELTCMWQGCSEKLPTPESL 93

>TEGU_EBV (P03186) Large tegument protein|
          Length = 3149

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
 Frame = +3

Query: 105 ATSEPRR--HGRLPGAPARERGFGVASSHRRAKSWRRPPL 218
           A S P R   G  P  P R++G G  S H++  S RR PL
Sbjct: 396 APSTPPRASSGAAPQTPKRKKGLGKDSPHKKPTSGRRLPL 435

>PROQ_YERPE (Q8ZFJ9) ProP effector|
          Length = 237

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 19/65 (29%), Positives = 24/65 (36%)
 Frame = +3

Query: 39  ARISRQNFELLXXXXXXXXXXXATSEPRRHGRLPGAPARERGFGVASSHRRAKSWRRPPL 218
           AR+  Q  E              T EPRR       PA  R  G A  +R+ +   RP  
Sbjct: 108 ARVQAQRAEQQAKKREAAIAAGETPEPRRPRPAGKKPAPRREAGAAPENRKPRQSPRPQQ 167

Query: 219 LEAPR 233
           +  PR
Sbjct: 168 VRPPR 172

>CJ095_HUMAN (Q9H7T3) Protein C10orf95|
          Length = 257

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 25/71 (35%), Positives = 30/71 (42%), Gaps = 3/71 (4%)
 Frame = +3

Query: 114 EPRRHGR-LPGAPARERGFGVASSHRRAKSWRRPPLLEAPR--NRQTGPRVPT*TCRFRG 284
           EPR   R LP A   + G   A S   ++   RP +  A R  NR +G R        R 
Sbjct: 13  EPRSGSRRLPKAEGDKSGSAGAPSKNSSRLGGRPCMCTAGRRPNRASGRRR-------RS 65

Query: 285 CVSRVTWPMLC 317
           C    TWP LC
Sbjct: 66  CSPAPTWPPLC 76

>Y1690_THEMA (Q9X216) UPF0296 protein TM1690|
          Length = 92

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 9/26 (34%), Positives = 20/26 (76%)
 Frame = +1

Query: 1   NPESYPLTKLRRQREFRGKILNSSHG 78
           NPES PL +++ + +  GK++++++G
Sbjct: 23  NPESSPLKRMKDEAKLEGKLIDATYG 48

>KLF14_HUMAN (Q8TD94) Krueppel-like factor 14 (Transcription factor BTEB5)|
           (Basic transcription element-binding protein 5)
           (BTE-binding protein 5)
          Length = 323

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 18/50 (36%), Positives = 20/50 (40%)
 Frame = +3

Query: 138 PGAPARERGFGVASSHRRAKSWRRPPLLEAPRNRQTGPRVPT*TCRFRGC 287
           PGAPA   GF    S     +   P   +APR R   P      C F GC
Sbjct: 157 PGAPAASGGF----SGGALGAGPAPAADQAPRRRSVTPAAKRHQCPFPGC 202

>CXA3_BOVIN (P41987) Gap junction alpha-3 protein (Connexin-44) (Cx44)|
          Length = 406

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 15/50 (30%), Positives = 19/50 (38%)
 Frame = +3

Query: 114 EPRRHGRLPGAPARERGFGVASSHRRAKSWRRPPLLEAPRNRQTGPRVPT 263
           EP     LPG P    G G      RA++W          +R+  P  PT
Sbjct: 289 EPPPPAALPGTPGTPGGGGNQGLRARAQNWANREAEPQTSSRKASPPAPT 338

>QUEA_GEOMG (Q39XD1) S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC|
           5.-.-.-) (Queuosine biosynthesis protein queA)
          Length = 343

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
 Frame = -2

Query: 343 IDPVRAEQPQ-SIGQVTRLTQPLNLQVHVGTRGPVWRFLGASRRGGRLQDLARR 185
           +D ++ E  + S  ++TRL +P +L V   TR    RF G    GGR++    R
Sbjct: 31  VDRLKGEVGEVSFREITRLFRPGDLLVVNDTRVIPARFFGVKESGGRVEVFLER 84

>B3A3_RAT (P23348) Anion exchange protein 3 (Neuronal band 3-like protein)|
           (Solute carrier family 4 member 3)
          Length = 1227

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 12/59 (20%)
 Frame = +2

Query: 206 AAASPRGTEKSPNWPPSSDVNLQIQRLCQSGDLAD------------ALRLLGSDGVDD 346
           A AS   TEKS  W PS+  +L+ +RLC    L +              ++LGS  +DD
Sbjct: 210 ARASRISTEKSRPWSPSASYDLR-ERLCPGSALGNPGPEQRVPTDEAEAQMLGSADLDD 267

>B3A3_MOUSE (P16283) Anion exchange protein 3 (Neuronal band 3-like protein)|
           (Solute carrier family 4 member 3)
          Length = 1227

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 12/59 (20%)
 Frame = +2

Query: 206 AAASPRGTEKSPNWPPSSDVNLQIQRLCQSGDLAD------------ALRLLGSDGVDD 346
           A AS   TEKS  W PS+  +L+ +RLC    L +              ++LGS  +DD
Sbjct: 210 ARASRISTEKSRPWSPSASYDLR-ERLCPGSALGNPGPEQRVPTDEAEAQMLGSADLDD 267

>TALA_POVM3 (P03074) Large T antigen|
          Length = 782

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = -1

Query: 305 PSHPTDTASESAGSRRN 255
           PS PTDT + +AG RRN
Sbjct: 154 PSSPTDTPAHTAGRRRN 170

>GAST_CANFA (P01353) Gastrin precursor [Contains: Big gastrin (Gastrin 34)|
           (G34); Gastrin]
          Length = 104

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 8/46 (17%)
 Frame = +3

Query: 138 PGAPARERGF--------GVASSHRRAKSWRRPPLLEAPRNRQTGP 251
           P  P   RG         G AS HRR    + PP L A  +++ GP
Sbjct: 33  PSGPGANRGLEPHGLDQLGPASHHRRQLGLQGPPQLVADLSKKQGP 78

>SWR1_EMENI (Q5ARK3) Helicase swr1 (EC 3.6.1.-)|
          Length = 1656

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = -2

Query: 376 AELEDGAVAPVIDPVRAEQPQSIGQVT 296
           AELE  A+ P ID    E+P +IG  T
Sbjct: 647 AELEPAAMTPSIDQTSTEEPIAIGTET 673

>DPOLN_MOUSE (Q7TQ07) DNA polymerase nu (EC 2.7.7.7)|
          Length = 864

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
 Frame = +2

Query: 143 STSQRARVRCSVLAPSGQVLEAAASPRGTEKSPNWPPSSDVNLQIQRLCQ---SGDLADA 313
           S+ +R  + CS    S +  +  A  + T+ + +WP S D     +RLC     GDLA A
Sbjct: 152 SSLKRKYITCS--KSSEKASKHTALEKDTDGTESWPNSRDTRALGERLCDVRYLGDLAKA 209

>YPT5_CAEEL (P41883) Hypothetical protein F37A4.5 in chromosome III|
          Length = 319

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = -2

Query: 370 LEDGAVAPVIDPVRAEQPQSIGQVTRLTQPLNLQV 266
           L   AVA V+DP+++ + + +    R   PLNLQ+
Sbjct: 134 LHPRAVAVVVDPIQSVKGKVMLDAFRSVNPLNLQI 168

>TALA_POVMA (P03073) Large T antigen|
          Length = 785

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = -1

Query: 305 PSHPTDTASESAGSRRN 255
           PS PTDT + +AG RRN
Sbjct: 154 PSSPTDTPAHTAGRRRN 170


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,039,285
Number of Sequences: 219361
Number of extensions: 803569
Number of successful extensions: 2727
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2644
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2727
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 1365190992
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)