ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl12e09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_188339.1| Oryza sativa (japonica cultivar-group), Ozsa809... 88 3e-14
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 88 3e-14
3dbj|AP001551.1| Oryza sativa (japonica cultivar-group) genomic D... 88 3e-14
4ref|XM_515675.1| PREDICTED: Pan troglodytes similar to esophagea... 48 0.022
5ref|XM_422007.1| PREDICTED: Gallus gallus similar to LOC129881 p... 44 0.34
6dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.34
7dbj|AP004891.4| Oryza sativa (japonica cultivar-group) genomic D... 44 0.34
8gb|BT017383.1| Zea mays clone EL01N0326E10.c mRNA sequence 42 1.3
9gb|AC079356.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.3
10gb|BC081015.1| Xenopus laevis MGC81601 protein, mRNA (cDNA clone... 42 1.3
11ref|XM_967479.1| PREDICTED: Tribolium castaneum similar to Nucle... 42 1.3
12dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 42 1.3
13dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
14ref|NM_032411.1| Homo sapiens esophageal cancer related gene 4 p... 40 5.3
15gb|BT016602.1| Zea mays clone Contig435 mRNA sequence 40 5.3
16gb|AC109595.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.3
17gb|AC124836.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.3
18gb|AY358601.1| Homo sapiens clone DNA73742 ECRG4 (UNQ761) mRNA, ... 40 5.3
19gb|BC021742.1| Homo sapiens esophageal cancer related gene 4 pro... 40 5.3
20gb|CP000249.1| Frankia sp. CcI3, complete genome 40 5.3
21gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 40 5.3
22dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
23dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
24dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
25gb|AF325503.1|AF325503 Homo sapiens esophageal cancer related ge... 40 5.3
26gb|AC018878.8| Homo sapiens BAC clone RP11-297N12 from 2, comple... 40 5.3
27emb|BX932236.1| Gallus gallus finished cDNA, clone ChEST361i16 40 5.3
28emb|BX931800.1| Gallus gallus finished cDNA, clone ChEST804o11 40 5.3
29emb|BX930388.1| Gallus gallus finished cDNA, clone ChEST597o13 40 5.3
30gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 5.3
31dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete g... 40 5.3
32dbj|AP005830.4| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
33dbj|AP005258.4| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
34dbj|AK111886.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.3
35gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.3
36emb|AL662991.3|OSJN00191 Oryza sativa genomic DNA, chromosome 4,... 40 5.3
37emb|AL731749.3|CNS08C7Y Oryza sativa chromosome 12, . BAC OJ1312... 40 5.3
38emb|AL732645.4|CNS08C9K Oryza sativa chromosome 12, . BAC OSJNBb... 40 5.3
39emb|AL606990.3|OSJN00122 Oryza sativa genomic DNA, chromosome 4,... 40 5.3
40dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 40 5.3
41gb|U10016.1|TRU10016 Trichoderma reesei QM9414 protein kinase C ... 40 5.3
42emb|AL139193.4|CNS01DXA Human chromosome 14 DNA sequence BAC R-6... 40 5.3
43gb|AC158595.25| Mus musculus 10 BAC RP24-216B14 (Roswell Park Ca... 40 5.3 
>ref|NM_188339.1| Oryza sativa (japonica cultivar-group), Ozsa8090 predicted mRNA
          Length = 3249

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 95/112 (84%)
 Strand = Plus / Plus

                                                                       
Query: 270 tgcagattcagaggctgtgtcagtcgggtgacttggccgatgctttgcggttgctcggct 329
           |||||||| ||||||| |||| | ||||||| || |  || || ||| ||||||||||||
Sbjct: 197 tgcagattgagaggctctgtcgggcgggtgagttagaggaggcgttgaggttgctcggct 256

                                                               
Query: 330 cggacggggtcgatgaccggagctacggcgccgtcctccagctctgctcgga 381
           |||| || ||||| | ||||||||||||||| ||| ||||||||||||||||
Sbjct: 257 cggatggcgtcgacgcccggagctacggcgcggtcgtccagctctgctcgga 308



 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 60/67 (89%)
 Strand = Plus / Plus

                                                                       
Query: 74  atggcgacgcccccagccgcctccatttccagccacctccgagccccgccgccatggccg 133
           ||||||||||| |||  | ||||| |||||||||||||||||||||| || |||||||||
Sbjct: 1   atggcgacgcctccactcacctccgtttccagccacctccgagcccctcctccatggccg 60

                  
Query: 134 cctccca 140
           |||||||
Sbjct: 61  cctccca 67
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 65/72 (90%)
 Strand = Plus / Minus

                                                                           
Query: 69      ctcccatggcgacgcccccagccgcctccatttccagccacctccgagccccgccgccat 128
               |||||||||||||||| |||  | ||||| |||||||||||||||||||||| || ||||
Sbjct: 5766907 ctcccatggcgacgcctccactcacctccgtttccagccacctccgagcccctcctccat 5766848

                           
Query: 129     ggccgcctccca 140
               ||||||||||||
Sbjct: 5766847 ggccgcctccca 5766836



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 95/112 (84%)
 Strand = Plus / Minus

                                                                           
Query: 270     tgcagattcagaggctgtgtcagtcgggtgacttggccgatgctttgcggttgctcggct 329
               |||||||| ||||||| |||| | ||||||| || |  || || ||| ||||||||||||
Sbjct: 5766706 tgcagattgagaggctctgtcgggcgggtgagttagaggaggcgttgaggttgctcggct 5766647

                                                                   
Query: 330     cggacggggtcgatgaccggagctacggcgccgtcctccagctctgctcgga 381
               |||| || ||||| | ||||||||||||||| ||| ||||||||||||||||
Sbjct: 5766646 cggatggcgtcgacgcccggagctacggcgcggtcgtccagctctgctcgga 5766595
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>dbj|AP001551.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0451C06
          Length = 151773

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 65/72 (90%)
 Strand = Plus / Minus

                                                                         
Query: 69    ctcccatggcgacgcccccagccgcctccatttccagccacctccgagccccgccgccat 128
             |||||||||||||||| |||  | ||||| |||||||||||||||||||||| || ||||
Sbjct: 91609 ctcccatggcgacgcctccactcacctccgtttccagccacctccgagcccctcctccat 91550

                         
Query: 129   ggccgcctccca 140
             ||||||||||||
Sbjct: 91549 ggccgcctccca 91538



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 95/112 (84%)
 Strand = Plus / Minus

                                                                         
Query: 270   tgcagattcagaggctgtgtcagtcgggtgacttggccgatgctttgcggttgctcggct 329
             |||||||| ||||||| |||| | ||||||| || |  || || ||| ||||||||||||
Sbjct: 91408 tgcagattgagaggctctgtcgggcgggtgagttagaggaggcgttgaggttgctcggct 91349

                                                                 
Query: 330   cggacggggtcgatgaccggagctacggcgccgtcctccagctctgctcgga 381
             |||| || ||||| | ||||||||||||||| ||| ||||||||||||||||
Sbjct: 91348 cggatggcgtcgacgcccggagctacggcgcggtcgtccagctctgctcgga 91297
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>ref|XM_515675.1| PREDICTED: Pan troglodytes similar to esophageal cancer related
           gene 4 protein (LOC459473), mRNA
          Length = 959

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 116 gccccgccgccatggccgcctccc 139
           ||||||||||||||||||||||||
Sbjct: 58  gccccgccgccatggccgcctccc 81
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>ref|XM_422007.1| PREDICTED: Gallus gallus similar to LOC129881 protein (LOC424161),
           mRNA
          Length = 3873

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 112 ccgagccccgccgccatggccg 133
           ||||||||||||||||||||||
Sbjct: 425 ccgagccccgccgccatggccg 404
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 117      ccccgccgccatggccgcctcc 138
                ||||||||||||||||||||||
Sbjct: 12364771 ccccgccgccatggccgcctcc 12364792
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>dbj|AP004891.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0705A04
          Length = 182468

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 117   ccccgccgccatggccgcctcc 138
             ||||||||||||||||||||||
Sbjct: 44908 ccccgccgccatggccgcctcc 44929
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>gb|BT017383.1| Zea mays clone EL01N0326E10.c mRNA sequence
          Length = 1067

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                            
Query: 253 gagttccgacgtgaacctgcagattcagaggctgtgtcagtcgggtgac 301
           ||||||||||||||||||||  || ||| | || |||||| ||||||||
Sbjct: 587 gagttccgacgtgaacctgcgaatccagcgcctctgtcaggcgggtgac 635
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>gb|AC079356.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0016H04,
              complete sequence
          Length = 176678

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 117    ccccgccgccatggccgcctcccag 141
              |||||||||||||| ||||||||||
Sbjct: 161888 ccccgccgccatggacgcctcccag 161864
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>gb|BC081015.1| Xenopus laevis MGC81601 protein, mRNA (cDNA clone MGC:81601
           IMAGE:6863636), complete cds
          Length = 3708

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 264 tgaacctgcagattcagaggc 284
           |||||||||||||||||||||
Sbjct: 688 tgaacctgcagattcagaggc 708
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>ref|XM_967479.1| PREDICTED: Tribolium castaneum similar to Nuclear valosin-containing
            protein-like (Nuclear VCP-like protein) (NVLp)
            (LOC661314), mRNA
          Length = 2469

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 119  ccgccgccatggccgcctccc 139
            |||||||||||||||||||||
Sbjct: 1288 ccgccgccatggccgcctccc 1268
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 114     gagccccgccgccatggccgc 134
               |||||||||||||||||||||
Sbjct: 4815566 gagccccgccgccatggccgc 4815546



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 121   gccgccatggccgcctcccag 141
             |||||||||||||||||||||
Sbjct: 73671 gccgccatggccgcctcccag 73651



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 116    gccccgccgccatggccgcc 135
              ||||||||||||||||||||
Sbjct: 754213 gccccgccgccatggccgcc 754194
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5,
              complete sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 117    ccccgccgccatggccgcctcccag 141
              |||||||||||||| ||||||||||
Sbjct: 644489 ccccgccgccatggacgcctcccag 644465



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 118      cccgccgccatggccgcctc 137
                ||||||||||||||||||||
Sbjct: 20581622 cccgccgccatggccgcctc 20581641
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>ref|NM_032411.1| Homo sapiens esophageal cancer related gene 4 protein (ECRG4), mRNA
          Length = 772

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 116 gccccgccgccatggccgcctccc 139
           |||||||||||||||| |||||||
Sbjct: 98  gccccgccgccatggctgcctccc 121
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>gb|BT016602.1| Zea mays clone Contig435 mRNA sequence
          Length = 1376

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 119 ccgccgccatggccgcctcc 138
           ||||||||||||||||||||
Sbjct: 31  ccgccgccatggccgcctcc 50
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>gb|AC109595.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1212_B02,
            complete sequence
          Length = 125650

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 118  cccgccgccatggccgcctc 137
            ||||||||||||||||||||
Sbjct: 3662 cccgccgccatggccgcctc 3681
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>gb|AC124836.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0092E21,
              complete sequence
          Length = 132649

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 118    cccgccgccatggccgcctc 137
              ||||||||||||||||||||
Sbjct: 125101 cccgccgccatggccgcctc 125120
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>gb|AY358601.1| Homo sapiens clone DNA73742 ECRG4 (UNQ761) mRNA, complete cds
          Length = 742

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 116 gccccgccgccatggccgcctccc 139
           |||||||||||||||| |||||||
Sbjct: 59  gccccgccgccatggctgcctccc 82
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>gb|BC021742.1| Homo sapiens esophageal cancer related gene 4 protein, mRNA (cDNA
           clone MGC:33676 IMAGE:5260075), complete cds
          Length = 800

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 116 gccccgccgccatggccgcctccc 139
           |||||||||||||||| |||||||
Sbjct: 102 gccccgccgccatggctgcctccc 125
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 133     gcctcccaggagcaccagcc 152
               ||||||||||||||||||||
Sbjct: 4786190 gcctcccaggagcaccagcc 4786171
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>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 119     ccgccgccatggccgcctcccagg 142
               ||||||||||||||||| ||||||
Sbjct: 1126358 ccgccgccatggccgccgcccagg 1126335
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 119      ccgccgccatggccgcctcc 138
                ||||||||||||||||||||
Sbjct: 16963755 ccgccgccatggccgcctcc 16963736
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 119      ccgccgccatggccgcctcc 138
                ||||||||||||||||||||
Sbjct: 14303427 ccgccgccatggccgcctcc 14303408
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 120      cgccgccatggccgcctccc 139
                ||||||||||||||||||||
Sbjct: 11450269 cgccgccatggccgcctccc 11450250
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>gb|AF325503.1|AF325503 Homo sapiens esophageal cancer related gene 4 protein (ECRG4) mRNA,
           complete cds
          Length = 772

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 116 gccccgccgccatggccgcctccc 139
           |||||||||||||||| |||||||
Sbjct: 98  gccccgccgccatggctgcctccc 121
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>gb|AC018878.8| Homo sapiens BAC clone RP11-297N12 from 2, complete sequence
          Length = 170801

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 116   gccccgccgccatggccgcctccc 139
             |||||||||||||||| |||||||
Sbjct: 36538 gccccgccgccatggctgcctccc 36561
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>emb|BX932236.1| Gallus gallus finished cDNA, clone ChEST361i16
          Length = 957

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 110 ctccgagccccgccgccatg 129
           ||||||||||||||||||||
Sbjct: 49  ctccgagccccgccgccatg 68
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>emb|BX931800.1| Gallus gallus finished cDNA, clone ChEST804o11
          Length = 970

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 110 ctccgagccccgccgccatg 129
           ||||||||||||||||||||
Sbjct: 56  ctccgagccccgccgccatg 75
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>emb|BX930388.1| Gallus gallus finished cDNA, clone ChEST597o13
          Length = 951

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 110 ctccgagccccgccgccatg 129
           ||||||||||||||||||||
Sbjct: 43  ctccgagccccgccgccatg 62
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 119     ccgccgccatggccgcctcc 138
               ||||||||||||||||||||
Sbjct: 2482326 ccgccgccatggccgcctcc 2482345
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>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome
          Length = 1849742

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 113    cgagccccgccgccatggcc 132
              ||||||||||||||||||||
Sbjct: 883202 cgagccccgccgccatggcc 883221
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>dbj|AP005830.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:B1120F06
          Length = 186712

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 120   cgccgccatggccgcctccc 139
             ||||||||||||||||||||
Sbjct: 13927 cgccgccatggccgcctccc 13908
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>dbj|AP005258.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0446G09
          Length = 146898

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 120   cgccgccatggccgcctccc 139
             ||||||||||||||||||||
Sbjct: 59789 cgccgccatggccgcctccc 59770
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>dbj|AK111886.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033068K11, full
           insert sequence
          Length = 2811

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 118 cccgccgccatggccgcctc 137
           ||||||||||||||||||||
Sbjct: 100 cccgccgccatggccgcctc 81
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 119      ccgccgccatggccgcctcc 138
                ||||||||||||||||||||
Sbjct: 14257705 ccgccgccatggccgcctcc 14257686
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>emb|AL662991.3|OSJN00191 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0002N06,
             complete sequence
          Length = 100589

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 119   ccgccgccatggccgcctcc 138
             ||||||||||||||||||||
Sbjct: 87580 ccgccgccatggccgcctcc 87561
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>emb|AL731749.3|CNS08C7Y Oryza sativa chromosome 12, . BAC OJ1312_H10 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 141067

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 119   ccgccgccatggccgcctcc 138
             ||||||||||||||||||||
Sbjct: 99045 ccgccgccatggccgcctcc 99026
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>emb|AL732645.4|CNS08C9K Oryza sativa chromosome 12, . BAC OSJNBb0090H23 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 134370

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 119   ccgccgccatggccgcctcc 138
             ||||||||||||||||||||
Sbjct: 10627 ccgccgccatggccgcctcc 10608
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>emb|AL606990.3|OSJN00122 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0066J23,
             complete sequence
          Length = 156934

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 119   ccgccgccatggccgcctcc 138
             ||||||||||||||||||||
Sbjct: 19011 ccgccgccatggccgcctcc 18992
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 107     cacctccgagccccgccgcc 126
               ||||||||||||||||||||
Sbjct: 2091236 cacctccgagccccgccgcc 2091255
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>gb|U10016.1|TRU10016 Trichoderma reesei QM9414 protein kinase C (pkc1) gene, complete cds
          Length = 5131

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 119  ccgccgccatggccgcctcccagg 142
            ||||||||||||||||| ||||||
Sbjct: 2999 ccgccgccatggccgccgcccagg 3022
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>emb|AL139193.4|CNS01DXA Human chromosome 14 DNA sequence BAC R-661G16 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 162691

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 267    acctgcagattcagaggctg 286
              ||||||||||||||||||||
Sbjct: 103581 acctgcagattcagaggctg 103562
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>gb|AC158595.25| Mus musculus 10 BAC RP24-216B14 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 231740

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 2      atccagaaagctatccactg 21
              ||||||||||||||||||||
Sbjct: 166735 atccagaaagctatccactg 166754


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,607,837
Number of Sequences: 3902068
Number of extensions: 2607837
Number of successful extensions: 53544
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 52805
Number of HSP's gapped (non-prelim): 739
length of query: 398
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 376
effective length of database: 17,147,199,772
effective search space: 6447347114272
effective search space used: 6447347114272
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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