ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl12e08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MMT1_HORVU (Q9MBC2) Methionine S-methyltransferase (EC 2.1.1.12)... 79 3e-15
2MMT1_MAIZE (Q8W519) Methionine S-methyltransferase (EC 2.1.1.12)... 60 1e-09
3MMT1_ARATH (Q9LTB2) Methionine S-methyltransferase (EC 2.1.1.12)... 47 2e-05
4MMT1_WOLBI (Q9SWR3) Methionine S-methyltransferase (EC 2.1.1.12)... 44 9e-05
5SYEP_MOUSE (Q8CGC7) Bifunctional aminoacyl-tRNA synthetase [Incl... 31 0.76
6GPMI_AGRT5 (Q8UAA5) 2,3-bisphosphoglycerate-independent phosphog... 30 2.2
7ZIC5_HUMAN (Q96T25) Zinc finger protein ZIC 5 (Zinc finger prote... 28 4.9
8F16P1_RHIME (Q9EXV4) Fructose-1,6-bisphosphatase (EC 3.1.3.11) (... 28 6.4
9OSA_DROSI (Q9N6K2) Trithorax group protein osa (Protein eyelid) ... 28 6.4

>MMT1_HORVU (Q9MBC2) Methionine S-methyltransferase (EC 2.1.1.12) (AdoMet:Met|
           S-methyltransferase) (Hv-MMT1)
          Length = 1088

 Score = 79.0 bits (193), Expect = 3e-15
 Identities = 40/41 (97%), Positives = 40/41 (97%)
 Frame = +2

Query: 98  MAAAAGDVEAFLAACQASGDAAYGAVKAVLERLEAPATRAE 220
           MAAAAGDVEAFLAACQASGDAAYGA KAVLERLEAPATRAE
Sbjct: 1   MAAAAGDVEAFLAACQASGDAAYGAAKAVLERLEAPATRAE 41



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>MMT1_MAIZE (Q8W519) Methionine S-methyltransferase (EC 2.1.1.12) (AdoMet:Met|
           S-methyltransferase)
          Length = 1091

 Score = 60.5 bits (145), Expect = 1e-09
 Identities = 33/42 (78%), Positives = 34/42 (80%), Gaps = 3/42 (7%)
 Frame = +2

Query: 98  MAAAAG---DVEAFLAACQASGDAAYGAVKAVLERLEAPATR 214
           MAA AG   DV+AFLA C ASGDAAYGA KAVLERL APATR
Sbjct: 1   MAALAGEDKDVDAFLADCTASGDAAYGAAKAVLERLHAPATR 42



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>MMT1_ARATH (Q9LTB2) Methionine S-methyltransferase (EC 2.1.1.12) (AdoMet:Met|
           S-methyltransferase)
          Length = 1071

 Score = 46.6 bits (109), Expect = 2e-05
 Identities = 22/39 (56%), Positives = 29/39 (74%)
 Frame = +2

Query: 104 AAAGDVEAFLAACQASGDAAYGAVKAVLERLEAPATRAE 220
           A    V+ FL  C+ SGDAAYGA+++VLERLE P TR++
Sbjct: 2   ADLSSVDEFLNQCKQSGDAAYGALRSVLERLEDPNTRSK 40



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>MMT1_WOLBI (Q9SWR3) Methionine S-methyltransferase (EC 2.1.1.12) (AdoMet:Met|
           S-methyltransferase)
          Length = 1088

 Score = 44.3 bits (103), Expect = 9e-05
 Identities = 19/36 (52%), Positives = 26/36 (72%)
 Frame = +2

Query: 113 GDVEAFLAACQASGDAAYGAVKAVLERLEAPATRAE 220
           G ++ FL  C  SGD+AY A++++LERLE P TR E
Sbjct: 9   GSIDEFLNHCSQSGDSAYSALRSLLERLEKPDTRTE 44



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>SYEP_MOUSE (Q8CGC7) Bifunctional aminoacyl-tRNA synthetase [Includes:|
            Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA
            ligase); Prolyl-tRNA synthetase (EC 6.1.1.15)
            (Proline--tRNA ligase)]
          Length = 1512

 Score = 31.2 bits (69), Expect = 0.76
 Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 7/70 (10%)
 Frame = +2

Query: 2    TGSTYQP-ITSCSCSSHSNPLEGTEPSVQSRP------GMAAAAGDVEAFLAACQASGDA 160
            TG  Y P     S +SHSNP+   +P+   +P         A  G+V   L A +AS D 
Sbjct: 868  TGKDYVPGQPPASQNSHSNPVSNAQPAGAEKPEAKVLFDRVACQGEVVRKLKAEKASKDQ 927

Query: 161  AYGAVKAVLE 190
               AV+ +L+
Sbjct: 928  VDSAVQELLQ 937



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>GPMI_AGRT5 (Q8UAA5) 2,3-bisphosphoglycerate-independent phosphoglycerate|
           mutase (EC 5.4.2.1) (Phosphoglyceromutase)
           (BPG-independent PGAM) (iPGM)
          Length = 505

 Score = 29.6 bits (65), Expect = 2.2
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = +2

Query: 86  SRPGMAAAAGDVEAFLAACQASGDAAYGAVKAVLERL 196
           + P M    GD++A + AC+A  D   GAV A LE++
Sbjct: 392 ANPDMVGHTGDLQAAIKACEAV-DRGLGAVVAALEKV 427



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>ZIC5_HUMAN (Q96T25) Zinc finger protein ZIC 5 (Zinc finger protein of the|
           cerebellum 5)
          Length = 639

 Score = 28.5 bits (62), Expect = 4.9
 Identities = 22/51 (43%), Positives = 24/51 (47%), Gaps = 6/51 (11%)
 Frame = +2

Query: 47  HSNPLEGTEPSVQSRPGMAAAAGDVEAFLAA------CQASGDAAYGAVKA 181
           H +PL G     Q R G+AAAA    A L           SGDA YGAV A
Sbjct: 249 HPHPLNG-----QMRLGLAAAAAAAAAELYGRAEPPFAPRSGDAHYGAVAA 294



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>F16P1_RHIME (Q9EXV4) Fructose-1,6-bisphosphatase (EC 3.1.3.11)|
           (D-fructose-1,6-bisphosphate 1-phosphohydrolase)
           (FBPase)
          Length = 349

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = +2

Query: 119 VEAFLAACQASGDAAYGAVKAVLERLEAPA 208
           +EA+LA+C A GD     V AV++RL   A
Sbjct: 6   LEAYLASCTARGDDLSRDVAAVIQRLAKAA 35



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>OSA_DROSI (Q9N6K2) Trithorax group protein osa (Protein eyelid) (Fragment)|
          Length = 324

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 25/77 (32%), Positives = 32/77 (41%), Gaps = 5/77 (6%)
 Frame = +2

Query: 2   TGSTYQPITSCSCSSHSNPLEGTEPSVQSRPGMAAAAGDVEAFLAAC-----QASGDAAY 166
           T S+ Q   S + SSHS+    ++ ++      AAA G   A  AA      Q S  AA 
Sbjct: 209 TASSNQTNNSTTNSSHSSSAISSQSAITVAAPSAAATGAPSATAAAIASDQQQVSKAAAA 268

Query: 167 GAVKAVLERLEAPATRA 217
            A  A L    A A  A
Sbjct: 269 AAAAAALSNASAAAAAA 285


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,994,397
Number of Sequences: 219361
Number of extensions: 255164
Number of successful extensions: 1041
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1017
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1039
length of database: 80,573,946
effective HSP length: 49
effective length of database: 69,825,257
effective search space used: 1675806168
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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