Clone Name | bastl12e08 |
---|---|
Clone Library Name | barley_pub |
>MMT1_HORVU (Q9MBC2) Methionine S-methyltransferase (EC 2.1.1.12) (AdoMet:Met| S-methyltransferase) (Hv-MMT1) Length = 1088 Score = 79.0 bits (193), Expect = 3e-15 Identities = 40/41 (97%), Positives = 40/41 (97%) Frame = +2 Query: 98 MAAAAGDVEAFLAACQASGDAAYGAVKAVLERLEAPATRAE 220 MAAAAGDVEAFLAACQASGDAAYGA KAVLERLEAPATRAE Sbjct: 1 MAAAAGDVEAFLAACQASGDAAYGAAKAVLERLEAPATRAE 41
>MMT1_MAIZE (Q8W519) Methionine S-methyltransferase (EC 2.1.1.12) (AdoMet:Met| S-methyltransferase) Length = 1091 Score = 60.5 bits (145), Expect = 1e-09 Identities = 33/42 (78%), Positives = 34/42 (80%), Gaps = 3/42 (7%) Frame = +2 Query: 98 MAAAAG---DVEAFLAACQASGDAAYGAVKAVLERLEAPATR 214 MAA AG DV+AFLA C ASGDAAYGA KAVLERL APATR Sbjct: 1 MAALAGEDKDVDAFLADCTASGDAAYGAAKAVLERLHAPATR 42
>MMT1_ARATH (Q9LTB2) Methionine S-methyltransferase (EC 2.1.1.12) (AdoMet:Met| S-methyltransferase) Length = 1071 Score = 46.6 bits (109), Expect = 2e-05 Identities = 22/39 (56%), Positives = 29/39 (74%) Frame = +2 Query: 104 AAAGDVEAFLAACQASGDAAYGAVKAVLERLEAPATRAE 220 A V+ FL C+ SGDAAYGA+++VLERLE P TR++ Sbjct: 2 ADLSSVDEFLNQCKQSGDAAYGALRSVLERLEDPNTRSK 40
>MMT1_WOLBI (Q9SWR3) Methionine S-methyltransferase (EC 2.1.1.12) (AdoMet:Met| S-methyltransferase) Length = 1088 Score = 44.3 bits (103), Expect = 9e-05 Identities = 19/36 (52%), Positives = 26/36 (72%) Frame = +2 Query: 113 GDVEAFLAACQASGDAAYGAVKAVLERLEAPATRAE 220 G ++ FL C SGD+AY A++++LERLE P TR E Sbjct: 9 GSIDEFLNHCSQSGDSAYSALRSLLERLEKPDTRTE 44
>SYEP_MOUSE (Q8CGC7) Bifunctional aminoacyl-tRNA synthetase [Includes:| Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA ligase); Prolyl-tRNA synthetase (EC 6.1.1.15) (Proline--tRNA ligase)] Length = 1512 Score = 31.2 bits (69), Expect = 0.76 Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 7/70 (10%) Frame = +2 Query: 2 TGSTYQP-ITSCSCSSHSNPLEGTEPSVQSRP------GMAAAAGDVEAFLAACQASGDA 160 TG Y P S +SHSNP+ +P+ +P A G+V L A +AS D Sbjct: 868 TGKDYVPGQPPASQNSHSNPVSNAQPAGAEKPEAKVLFDRVACQGEVVRKLKAEKASKDQ 927 Query: 161 AYGAVKAVLE 190 AV+ +L+ Sbjct: 928 VDSAVQELLQ 937
>GPMI_AGRT5 (Q8UAA5) 2,3-bisphosphoglycerate-independent phosphoglycerate| mutase (EC 5.4.2.1) (Phosphoglyceromutase) (BPG-independent PGAM) (iPGM) Length = 505 Score = 29.6 bits (65), Expect = 2.2 Identities = 15/37 (40%), Positives = 22/37 (59%) Frame = +2 Query: 86 SRPGMAAAAGDVEAFLAACQASGDAAYGAVKAVLERL 196 + P M GD++A + AC+A D GAV A LE++ Sbjct: 392 ANPDMVGHTGDLQAAIKACEAV-DRGLGAVVAALEKV 427
>ZIC5_HUMAN (Q96T25) Zinc finger protein ZIC 5 (Zinc finger protein of the| cerebellum 5) Length = 639 Score = 28.5 bits (62), Expect = 4.9 Identities = 22/51 (43%), Positives = 24/51 (47%), Gaps = 6/51 (11%) Frame = +2 Query: 47 HSNPLEGTEPSVQSRPGMAAAAGDVEAFLAA------CQASGDAAYGAVKA 181 H +PL G Q R G+AAAA A L SGDA YGAV A Sbjct: 249 HPHPLNG-----QMRLGLAAAAAAAAAELYGRAEPPFAPRSGDAHYGAVAA 294
>F16P1_RHIME (Q9EXV4) Fructose-1,6-bisphosphatase (EC 3.1.3.11)| (D-fructose-1,6-bisphosphate 1-phosphohydrolase) (FBPase) Length = 349 Score = 28.1 bits (61), Expect = 6.4 Identities = 14/30 (46%), Positives = 19/30 (63%) Frame = +2 Query: 119 VEAFLAACQASGDAAYGAVKAVLERLEAPA 208 +EA+LA+C A GD V AV++RL A Sbjct: 6 LEAYLASCTARGDDLSRDVAAVIQRLAKAA 35
>OSA_DROSI (Q9N6K2) Trithorax group protein osa (Protein eyelid) (Fragment)| Length = 324 Score = 28.1 bits (61), Expect = 6.4 Identities = 25/77 (32%), Positives = 32/77 (41%), Gaps = 5/77 (6%) Frame = +2 Query: 2 TGSTYQPITSCSCSSHSNPLEGTEPSVQSRPGMAAAAGDVEAFLAAC-----QASGDAAY 166 T S+ Q S + SSHS+ ++ ++ AAA G A AA Q S AA Sbjct: 209 TASSNQTNNSTTNSSHSSSAISSQSAITVAAPSAAATGAPSATAAAIASDQQQVSKAAAA 268 Query: 167 GAVKAVLERLEAPATRA 217 A A L A A A Sbjct: 269 AAAAAALSNASAAAAAA 285 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 18,994,397 Number of Sequences: 219361 Number of extensions: 255164 Number of successful extensions: 1041 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 1017 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1039 length of database: 80,573,946 effective HSP length: 49 effective length of database: 69,825,257 effective search space used: 1675806168 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)