ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl12e06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AB179769.1| Oryza sativa (japonica cultivar-group) EXO-1 mRN... 400 e-108
2ref|NM_191476.1| Oryza sativa (japonica cultivar-group), predic... 394 e-107
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 208 1e-50
4dbj|AP003344.2| Oryza sativa (japonica cultivar-group) genomic D... 208 1e-50
5gb|AY020091.1| Oryza sativa microsatellite MRG2416 containing (C... 90 6e-15
6gb|AC144608.10| Medicago truncatula clone mth2-23d2, complete se... 58 2e-05
7gb|AC153460.22| Medicago truncatula clone mth2-76i7, complete se... 58 2e-05
8dbj|AP006697.1| Lotus japonicus genomic DNA, chromosome 4, clone... 50 0.006
9dbj|AP004519.1| Lotus japonicus genomic DNA, chromosome 4, clone... 50 0.006
10ref|XM_479753.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.087
11gb|AY023294.1| Oryza sativa microsatellite MRG5619 containing (G... 46 0.087
12dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.087
13gb|AC139676.3| Homo sapiens chromosome 8, clone RP13-648O9, comp... 46 0.087
14dbj|AP004566.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.087
15dbj|AK121176.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.087
16emb|X54244.1|GDGARA1 Chicken mRNA for GABA-A receptor alpha-1 su... 44 0.34
17dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.34
18dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.34
19emb|AL662967.2|OSJN00166 Oryza sativa genomic DNA, chromosome 4,... 44 0.34
20gb|AF077351.1|AF077351 Mus musculus inhibitor of apoptosis homol... 44 0.34
21ref|NM_204318.1| Gallus gallus gamma-aminobutyric acid (GABA) A ... 44 0.34
22dbj|AP006050.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.34
23dbj|AP005930.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.34
24dbj|AP005819.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.34
25dbj|AK071001.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.34
26gb|L35575.1|CHKGABAARA Gallus domesticus gamma-aminobutyric acid... 44 0.34
27gb|AF115517.1| Mus musculus survivin40, survivin121, and survivi... 44 0.34
28emb|AL591433.6| Mouse DNA sequence from clone RP23-268N22 on chr... 44 0.34
29dbj|AB036741.1| Mus musculus gene for TIAP, complete cds 44 0.34
30gb|AC127256.4| Mus musculus BAC clone RP24-296G17 from chromosom... 42 1.4
31ref|XM_343439.2| PREDICTED: Rattus norvegicus branched chain ket... 42 1.4
32gb|AC154843.2| Mus musculus BAC clone RP23-58N15 from chromosome... 42 1.4
33ref|XM_467434.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.4
34ref|XM_466046.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.4
35ref|NM_001031004.1| Gallus gallus NOL1/NOP2/Sun domain family, m... 40 5.4
36ref|NM_175529.2| Mus musculus leukocyte receptor cluster (LRC) m... 40 5.4
37ref|NM_174128.2| Bos taurus neuregulin 1 (NRG1), mRNA 40 5.4
38ref|XM_323665.1| Neurospora crassa OR74A hypothetical protein (N... 40 5.4
39ref|XM_955879.1| Neurospora crassa OR74A hypothetical protein (N... 40 5.4
40ref|XM_957960.1| Neurospora crassa OR74A hypothetical protein (N... 40 5.4
41ref|XM_325545.1| Neurospora crassa OR74A hypothetical protein (N... 40 5.4
42emb|CR956424.18| Pig DNA sequence from clone PigE-234J24 on chro... 40 5.4
43emb|AL139158.11| Human DNA sequence from clone RP5-884C9 on chro... 40 5.4
44emb|BX294026.1|NCB7H23 Neurospora crassa DNA linkage group V BAC... 40 5.4
45emb|AL731579.4|OSJN00225 Oryza sativa genomic DNA, chromosome 4,... 40 5.4
46emb|AJ719630.1| Gallus gallus mRNA for hypothetical protein, clo... 40 5.4
47gb|AC101941.11| Mus musculus chromosome 7, clone RP24-112F21, co... 40 5.4
48emb|BX000345.4|CNS08CDB Oryza sativa chromosome 12, . BAC OSJNBb... 40 5.4
49gb|AC027238.5| Homo sapiens chromosome 8, clone RP11-377F20, com... 40 5.4
50dbj|AK134559.1| Mus musculus adult male medulla oblongata cDNA, ... 40 5.4
51gb|AC013545.8| Homo sapiens chromosome 8, clone RP11-414D17, com... 40 5.4
52dbj|AK147019.1| Mus musculus 17 days pregnant adult female amnio... 40 5.4
53dbj|AK164490.1| Mus musculus 13 days embryo heart cDNA, RIKEN fu... 40 5.4
54gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 40 5.4
55dbj|AK090365.1| Mus musculus 11 days embryo spinal cord cDNA, RI... 40 5.4
56gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome 40 5.4
57dbj|AK089196.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 40 5.4
58dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
59dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
60dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
61gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome 40 5.4
62gb|AC037425.7|AC037425 Oryza sativa chromosome 10 BAC OSJNBa0055... 40 5.4
63gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 5.4
64dbj|AP003983.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
65dbj|AP004777.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
66dbj|AK105197.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.4
67dbj|AK073485.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.4
68gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.4
69gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.4
70emb|BX664712.3|CNS09SC2 Oryza sativa chromosome 12, . BAC B1373G... 40 5.4
71emb|AL713900.4|CNS07YQ0 Oryza sativa chromosome 12, . BAC OJ1126... 40 5.4
72emb|AL607004.4|OSJN00129 Oryza sativa genomic DNA, chromosome 4,... 40 5.4
73gb|L12259.1|BOVGGFA Bos taurus glial growth factor mRNA, complet... 40 5.4 
>dbj|AB179769.1| Oryza sativa (japonica cultivar-group) EXO-1 mRNA for
           exonuclease-1, complete cds
          Length = 3110

 Score =  400 bits (202), Expect = e-108
 Identities = 316/354 (89%)
 Strand = Plus / Plus

                                                                       
Query: 38  ggcggcgatggggatccagggtttgctgccgcaactcaagtcgataatggcgcccatcag 97
           |||||| |||||||||||||| ||||||||||| || |||||||| |||||||||||| |
Sbjct: 29  ggcggcaatggggatccagggattgctgccgcagctgaagtcgatcatggcgcccatcgg 88

                                                                       
Query: 98  gatggaggacctgagggggcaaacggtcgccgtcgacacctactcctggctccacaaggg 157
           | ||||||  || | ||| || ||||| ||||||||||||||||||||||||||||||||
Sbjct: 89  ggtggaggcgctcaagggccagacggtggccgtcgacacctactcctggctccacaaggg 148

                                                                       
Query: 158 cgccctctcctgcggcgaccgcctctgcaagggcatccccaccaccaggcacattgagta 217
           |||||||||||||||||||||||||||||||||| | |||||||||||||| ||||||||
Sbjct: 149 cgccctctcctgcggcgaccgcctctgcaagggcctacccaccaccaggcatattgagta 208

                                                                       
Query: 218 ctgcatgcatagggttaacttgttgcggcaccatggcgtgaagccaattcttgtatttga 277
            |||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||
Sbjct: 209 ttgcatgcatagggttaacatgttgcggcaccatggcgtgaaaccaatccttgtatttga 268

                                                                       
Query: 278 tggaggctttctgccaatgaagagcgaacaagaggtcaaacgtgcaaggtcacgaaagga 337
            |||||   |||||| |||||| | || ||||||   ||||||| |||||||||||||||
Sbjct: 269 cggaggtcatctgccgatgaagggtgatcaagagactaaacgtgaaaggtcacgaaagga 328

                                                                 
Query: 338 aaatcttgagcgtgccagggaacatgaagcagctgggaattcccgtgctgcttt 391
           ||||||||||||||||| ||| |||||| | ||||||||||| |||||||||||
Sbjct: 329 aaatcttgagcgtgccaaggagcatgaatctgctgggaattcacgtgctgcttt 382
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>ref|NM_191476.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2430

 Score =  394 bits (199), Expect = e-107
 Identities = 310/347 (89%)
 Strand = Plus / Plus

                                                                       
Query: 45  atggggatccagggtttgctgccgcaactcaagtcgataatggcgcccatcaggatggag 104
           |||||||||||||| ||||||||||| || |||||||| |||||||||||| || |||||
Sbjct: 1   atggggatccagggattgctgccgcagctgaagtcgatcatggcgcccatcggggtggag 60

                                                                       
Query: 105 gacctgagggggcaaacggtcgccgtcgacacctactcctggctccacaagggcgccctc 164
           |  || | ||| || ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gcgctcaagggccagacggtggccgtcgacacctactcctggctccacaagggcgccctc 120

                                                                       
Query: 165 tcctgcggcgaccgcctctgcaagggcatccccaccaccaggcacattgagtactgcatg 224
           ||||||||||||||||||||||||||| | |||||||||||||| |||||||| ||||||
Sbjct: 121 tcctgcggcgaccgcctctgcaagggcctacccaccaccaggcatattgagtattgcatg 180

                                                                       
Query: 225 catagggttaacttgttgcggcaccatggcgtgaagccaattcttgtatttgatggaggc 284
           |||||||||||| |||||||||||||||||||||| ||||| ||||||||||| ||||| 
Sbjct: 181 catagggttaacatgttgcggcaccatggcgtgaaaccaatccttgtatttgacggaggt 240

                                                                       
Query: 285 tttctgccaatgaagagcgaacaagaggtcaaacgtgcaaggtcacgaaaggaaaatctt 344
             |||||| |||||| | || ||||||   ||||||| ||||||||||||||||||||||
Sbjct: 241 catctgccgatgaagggtgatcaagagactaaacgtgaaaggtcacgaaaggaaaatctt 300

                                                          
Query: 345 gagcgtgccagggaacatgaagcagctgggaattcccgtgctgcttt 391
           |||||||||| ||| |||||| | ||||||||||| |||||||||||
Sbjct: 301 gagcgtgccaaggagcatgaatctgctgggaattcacgtgctgcttt 347
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  208 bits (105), Expect = 1e-50
 Identities = 153/169 (90%)
 Strand = Plus / Plus

                                                                            
Query: 38       ggcggcgatggggatccagggtttgctgccgcaactcaagtcgataatggcgcccatcag 97
                |||||| |||||||||||||| ||||||||||| || |||||||| |||||||||||| |
Sbjct: 32886686 ggcggcaatggggatccagggattgctgccgcagctgaagtcgatcatggcgcccatcgg 32886745

                                                                            
Query: 98       gatggaggacctgagggggcaaacggtcgccgtcgacacctactcctggctccacaaggg 157
                | ||||||  || | ||| || ||||| ||||||||||||||||||||||||||||||||
Sbjct: 32886746 ggtggaggcgctcaagggccagacggtggccgtcgacacctactcctggctccacaaggg 32886805

                                                                 
Query: 158      cgccctctcctgcggcgaccgcctctgcaagggcatccccaccaccagg 206
                |||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 32886806 cgccctctcctgcggcgaccgcctctgcaagggcctacccaccaccagg 32886854



 Score =  117 bits (59), Expect = 3e-23
 Identities = 77/83 (92%)
 Strand = Plus / Plus

                                                                            
Query: 201      accaggcacattgagtactgcatgcatagggttaacttgttgcggcaccatggcgtgaag 260
                |||||||| |||||||| |||||||||||||||||| |||||||||||||||||||||| 
Sbjct: 32887584 accaggcatattgagtattgcatgcatagggttaacatgttgcggcaccatggcgtgaaa 32887643

                                       
Query: 261      ccaattcttgtatttgatggagg 283
                ||||| ||||||||||| |||||
Sbjct: 32887644 ccaatccttgtatttgacggagg 32887666



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 63/68 (92%)
 Strand = Plus / Plus

                                                                            
Query: 324      aggtcacgaaaggaaaatcttgagcgtgccagggaacatgaagcagctgggaattcccgt 383
                ||||||||||||||||||||||||||||||| ||| |||||| | ||||||||||| |||
Sbjct: 32887976 aggtcacgaaaggaaaatcttgagcgtgccaaggagcatgaatctgctgggaattcacgt 32888035

                        
Query: 384      gctgcttt 391
                ||||||||
Sbjct: 32888036 gctgcttt 32888043
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>dbj|AP003344.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0413G02
          Length = 155633

 Score =  208 bits (105), Expect = 1e-50
 Identities = 153/169 (90%)
 Strand = Plus / Plus

                                                                          
Query: 38     ggcggcgatggggatccagggtttgctgccgcaactcaagtcgataatggcgcccatcag 97
              |||||| |||||||||||||| ||||||||||| || |||||||| |||||||||||| |
Sbjct: 108091 ggcggcaatggggatccagggattgctgccgcagctgaagtcgatcatggcgcccatcgg 108150

                                                                          
Query: 98     gatggaggacctgagggggcaaacggtcgccgtcgacacctactcctggctccacaaggg 157
              | ||||||  || | ||| || ||||| ||||||||||||||||||||||||||||||||
Sbjct: 108151 ggtggaggcgctcaagggccagacggtggccgtcgacacctactcctggctccacaaggg 108210

                                                               
Query: 158    cgccctctcctgcggcgaccgcctctgcaagggcatccccaccaccagg 206
              |||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 108211 cgccctctcctgcggcgaccgcctctgcaagggcctacccaccaccagg 108259



 Score =  117 bits (59), Expect = 3e-23
 Identities = 77/83 (92%)
 Strand = Plus / Plus

                                                                          
Query: 201    accaggcacattgagtactgcatgcatagggttaacttgttgcggcaccatggcgtgaag 260
              |||||||| |||||||| |||||||||||||||||| |||||||||||||||||||||| 
Sbjct: 108989 accaggcatattgagtattgcatgcatagggttaacatgttgcggcaccatggcgtgaaa 109048

                                     
Query: 261    ccaattcttgtatttgatggagg 283
              ||||| ||||||||||| |||||
Sbjct: 109049 ccaatccttgtatttgacggagg 109071



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 63/68 (92%)
 Strand = Plus / Plus

                                                                          
Query: 324    aggtcacgaaaggaaaatcttgagcgtgccagggaacatgaagcagctgggaattcccgt 383
              ||||||||||||||||||||||||||||||| ||| |||||| | ||||||||||| |||
Sbjct: 109381 aggtcacgaaaggaaaatcttgagcgtgccaaggagcatgaatctgctgggaattcacgt 109440

                      
Query: 384    gctgcttt 391
              ||||||||
Sbjct: 109441 gctgcttt 109448
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>gb|AY020091.1| Oryza sativa microsatellite MRG2416 containing (CT)X17, genomic
           sequence
          Length = 234

 Score = 89.7 bits (45), Expect = 6e-15
 Identities = 87/101 (86%)
 Strand = Plus / Minus

                                                                       
Query: 38  ggcggcgatggggatccagggtttgctgccgcaactcaagtcgataatggcgcccatcag 97
           |||||| |||||||||||||| ||||||||||| || |||||||| |||||||||||| |
Sbjct: 101 ggcggcaatggggatccagggattgctgccgcagctgaagtcgatcatggcgcccatcgg 42

                                                    
Query: 98  gatggaggacctgagggggcaaacggtcgccgtcgacacct 138
           | ||||||  || | ||| || ||||| |||||||||||||
Sbjct: 41  ggtggaggcgctcaagggccagacggtggccgtcgacacct 1
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>gb|AC144608.10| Medicago truncatula clone mth2-23d2, complete sequence
          Length = 112000

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 68/81 (83%)
 Strand = Plus / Plus

                                                                          
Query: 203    caggcacattgagtactgcatgcatagggttaacttgttgcggcaccatggcgtgaagcc 262
              ||||||||||||||| || |||||||| || || ||| || | ||  |||| || |||||
Sbjct: 110107 caggcacattgagtattgtatgcatagagtgaatttgctgagacattatggtgttaagcc 110166

                                   
Query: 263    aattcttgtatttgatggagg 283
               ||||||||||||||||||||
Sbjct: 110167 tattcttgtatttgatggagg 110187
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>gb|AC153460.22| Medicago truncatula clone mth2-76i7, complete sequence
          Length = 127094

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 68/81 (83%)
 Strand = Plus / Minus

                                                                          
Query: 203    caggcacattgagtactgcatgcatagggttaacttgttgcggcaccatggcgtgaagcc 262
              ||||||||||||||| || |||||||| || || ||| || | ||  |||| || |||||
Sbjct: 120978 caggcacattgagtattgtatgcatagagtgaatttgctgagacattatggtgttaagcc 120919

                                   
Query: 263    aattcttgtatttgatggagg 283
               ||||||||||||||||||||
Sbjct: 120918 tattcttgtatttgatggagg 120898
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>dbj|AP006697.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT41M05, TM0404,
             complete sequence
          Length = 103744

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 88/109 (80%)
 Strand = Plus / Plus

                                                                         
Query: 203   caggcacattgagtactgcatgcatagggttaacttgttgcggcaccatggcgtgaagcc 262
             |||||| |||||||| ||||||| ||  || |||||| |||| ||| | || ||  ||||
Sbjct: 54316 caggcatattgagtattgcatgcgtaaagtgaacttgctgcgccactacggtgttgagcc 54375

                                                              
Query: 263   aattcttgtatttgatggaggctttctgccaatgaagagcgaacaagag 311
              ||||| ||||||||||||||  || | || |||||||| |||||||||
Sbjct: 54376 gattctagtatttgatggaggtcttttacccatgaagagtgaacaagag 54424
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>dbj|AP004519.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT07K08, TM0046b,
             complete sequence
          Length = 71321

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 88/109 (80%)
 Strand = Plus / Plus

                                                                         
Query: 203   caggcacattgagtactgcatgcatagggttaacttgttgcggcaccatggcgtgaagcc 262
             |||||| |||||||| ||||||| ||  || |||||| |||| ||| | || ||  ||||
Sbjct: 31511 caggcatattgagtattgcatgcgtaaagtgaacttgctgcgccactacggtgttgagcc 31570

                                                              
Query: 263   aattcttgtatttgatggaggctttctgccaatgaagagcgaacaagag 311
              ||||| ||||||||||||||  || | || |||||||| |||||||||
Sbjct: 31571 gattctagtatttgatggaggtcttttacccatgaagagtgaacaagag 31619
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>ref|XM_479753.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 830

 Score = 46.1 bits (23), Expect = 0.087
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 33  gcggcggcggcgatggggatcca 55
           |||||||||||||||||||||||
Sbjct: 78  gcggcggcggcgatggggatcca 100
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>gb|AY023294.1| Oryza sativa microsatellite MRG5619 containing (GGC)X10, closest to
           marker RM152, genomic sequence
          Length = 230

 Score = 46.1 bits (23), Expect = 0.087
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 33  gcggcggcggcgatggggatcca 55
           |||||||||||||||||||||||
Sbjct: 120 gcggcggcggcgatggggatcca 142
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8,
              complete sequence
          Length = 28434780

 Score = 46.1 bits (23), Expect = 0.087
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 33     gcggcggcggcgatggggatcca 55
              |||||||||||||||||||||||
Sbjct: 677713 gcggcggcggcgatggggatcca 677691



 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 23       gaggagcggagcggcggcggcg 44
                ||||||||||||||||||||||
Sbjct: 12208055 gaggagcggagcggcggcggcg 12208034



 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 23       gaggagcggagcggcggcggcg 44
                ||||||||||||||||||||||
Sbjct: 12200626 gaggagcggagcggcggcggcg 12200605
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>gb|AC139676.3| Homo sapiens chromosome 8, clone RP13-648O9, complete sequence
          Length = 166153

 Score = 46.1 bits (23), Expect = 0.087
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 22   agaggagcggagcggcggcggcg 44
            |||||||||||||||||||||||
Sbjct: 3391 agaggagcggagcggcggcggcg 3413
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>dbj|AP004566.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0498H04
          Length = 151046

 Score = 46.1 bits (23), Expect = 0.087
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 33     gcggcggcggcgatggggatcca 55
              |||||||||||||||||||||||
Sbjct: 105091 gcggcggcggcgatggggatcca 105069
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>dbj|AK121176.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023083C18, full
           insert sequence
          Length = 830

 Score = 46.1 bits (23), Expect = 0.087
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 33  gcggcggcggcgatggggatcca 55
           |||||||||||||||||||||||
Sbjct: 78  gcggcggcggcgatggggatcca 100
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>emb|X54244.1|GDGARA1 Chicken mRNA for GABA-A receptor alpha-1 subunit
          Length = 1810

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 23 gaggagcggagcggcggcggcg 44
          ||||||||||||||||||||||
Sbjct: 36 gaggagcggagcggcggcggcg 57
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 23       gaggagcggagcggcggcggcg 44
                ||||||||||||||||||||||
Sbjct: 17305115 gaggagcggagcggcggcggcg 17305094



 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 23       gaggagcggagcggcggcggcg 44
                ||||||||||||||||||||||
Sbjct: 17297681 gaggagcggagcggcggcggcg 17297660



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 30       ggagcggcggcggcgatggggatc 53
                ||||| ||||||||||||||||||
Sbjct: 30133158 ggagcagcggcggcgatggggatc 30133135



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 30       ggagcggcggcggcgatggggatc 53
                ||||| ||||||||||||||||||
Sbjct: 30072455 ggagcagcggcggcgatggggatc 30072432
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 23      gaggagcggagcggcggcggcg 44
               ||||||||||||||||||||||
Sbjct: 9976324 gaggagcggagcggcggcggcg 9976345



 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 23      gaggagcggagcggcggcggcg 44
               ||||||||||||||||||||||
Sbjct: 9968896 gaggagcggagcggcggcggcg 9968917
to top
>emb|AL662967.2|OSJN00166 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0034E24,
              complete sequence
          Length = 152220

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 23     gaggagcggagcggcggcggcg 44
              ||||||||||||||||||||||
Sbjct: 105339 gaggagcggagcggcggcggcg 105318



 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 23    gaggagcggagcggcggcggcg 44
             ||||||||||||||||||||||
Sbjct: 97905 gaggagcggagcggcggcggcg 97884
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>gb|AF077351.1|AF077351 Mus musculus inhibitor of apoptosis homolog gene, complete cds
          Length = 9263

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 351  gccagggaacatgaagcagctg 372
            ||||||||||||||||||||||
Sbjct: 8753 gccagggaacatgaagcagctg 8732
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>ref|NM_204318.1| Gallus gallus gamma-aminobutyric acid (GABA) A receptor, alpha 1
          (GABRA1), mRNA
          Length = 1810

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 23 gaggagcggagcggcggcggcg 44
          ||||||||||||||||||||||
Sbjct: 36 gaggagcggagcggcggcggcg 57
to top
>dbj|AP006050.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0021H05
          Length = 159111

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 23    gaggagcggagcggcggcggcg 44
             ||||||||||||||||||||||
Sbjct: 49889 gaggagcggagcggcggcggcg 49910



 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 23    gaggagcggagcggcggcggcg 44
             ||||||||||||||||||||||
Sbjct: 42461 gaggagcggagcggcggcggcg 42482
to top
>dbj|AP005930.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0502B12
          Length = 197160

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 23     gaggagcggagcggcggcggcg 44
              ||||||||||||||||||||||
Sbjct: 140031 gaggagcggagcggcggcggcg 140052



 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 23     gaggagcggagcggcggcggcg 44
              ||||||||||||||||||||||
Sbjct: 132603 gaggagcggagcggcggcggcg 132624
to top
>dbj|AP005819.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0063H21
          Length = 188058

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 23    gaggagcggagcggcggcggcg 44
             ||||||||||||||||||||||
Sbjct: 81547 gaggagcggagcggcggcggcg 81526



 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 23    gaggagcggagcggcggcggcg 44
             ||||||||||||||||||||||
Sbjct: 74118 gaggagcggagcggcggcggcg 74097
to top
>dbj|AK071001.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023075J15,
          full insert sequence
          Length = 1443

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 23 gaggagcggagcggcggcggcg 44
          ||||||||||||||||||||||
Sbjct: 51 gaggagcggagcggcggcggcg 72
to top
>gb|L35575.1|CHKGABAARA Gallus domesticus gamma-aminobutyric acid A receptor gene, promoter
           region, exon 1
          Length = 1023

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 23  gaggagcggagcggcggcggcg 44
           ||||||||||||||||||||||
Sbjct: 856 gaggagcggagcggcggcggcg 877
to top
>gb|AF115517.1| Mus musculus survivin40, survivin121, and survivin140 genes,
            alternative splice products, complete cds
          Length = 10919

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 351  gccagggaacatgaagcagctg 372
            ||||||||||||||||||||||
Sbjct: 9708 gccagggaacatgaagcagctg 9687
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>emb|AL591433.6| Mouse DNA sequence from clone RP23-268N22 on chromosome 11, complete
             sequence
          Length = 203336

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 351   gccagggaacatgaagcagctg 372
             ||||||||||||||||||||||
Sbjct: 32533 gccagggaacatgaagcagctg 32512
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>dbj|AB036741.1| Mus musculus gene for TIAP, complete cds
          Length = 10074

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 351  gccagggaacatgaagcagctg 372
            ||||||||||||||||||||||
Sbjct: 9656 gccagggaacatgaagcagctg 9635
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>gb|AC127256.4| Mus musculus BAC clone RP24-296G17 from chromosome 18, complete
             sequence
          Length = 178519

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 139   actcctggctccacaagggcg 159
             |||||||||||||||||||||
Sbjct: 44798 actcctggctccacaagggcg 44818
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>ref|XM_343439.2| PREDICTED: Rattus norvegicus branched chain keto acid
          dehydrogenase E1, beta polypeptide (Bckdhb), mRNA
          Length = 1480

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 24 aggagcggagcggcggcggcg 44
          |||||||||||||||||||||
Sbjct: 79 aggagcggagcggcggcggcg 99
to top
>gb|AC154843.2| Mus musculus BAC clone RP23-58N15 from chromosome 14, complete sequence
          Length = 199716

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 212    tgagtactgcatgcatagggt 232
              |||||||||||||||||||||
Sbjct: 152236 tgagtactgcatgcatagggt 152256
to top
>ref|XM_467434.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 792

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 33  gcggcggcggcgatggggat 52
           ||||||||||||||||||||
Sbjct: 102 gcggcggcggcgatggggat 121
to top
>ref|XM_466046.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1338

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 23  gaggagcggagcggcggcgg 42
           ||||||||||||||||||||
Sbjct: 317 gaggagcggagcggcggcgg 298
to top
>ref|NM_001031004.1| Gallus gallus NOL1/NOP2/Sun domain family, member 2 (NSUN2), mRNA
          Length = 2702

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 25  ggagcggagcggcggcggcg 44
           ||||||||||||||||||||
Sbjct: 167 ggagcggagcggcggcggcg 186
to top
>ref|NM_175529.2| Mus musculus leukocyte receptor cluster (LRC) member 9 (Leng9),
           mRNA
          Length = 1691

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 176 ccgcctctgcaagggcatcc 195
           ||||||||||||||||||||
Sbjct: 762 ccgcctctgcaagggcatcc 743
to top
>ref|NM_174128.2| Bos taurus neuregulin 1 (NRG1), mRNA
          Length = 1634

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 24 aggagcggagcggcggcggc 43
          ||||||||||||||||||||
Sbjct: 47 aggagcggagcggcggcggc 66
to top
>ref|XM_323665.1| Neurospora crassa OR74A hypothetical protein (NCU04326.1) partial
            mRNA
          Length = 3234

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 121  cggtcgccgtcgacacctac 140
            ||||||||||||||||||||
Sbjct: 1999 cggtcgccgtcgacacctac 2018
to top
>ref|XM_955879.1| Neurospora crassa OR74A hypothetical protein (NCU04326.1) partial
            mRNA
          Length = 3234

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 121  cggtcgccgtcgacacctac 140
            ||||||||||||||||||||
Sbjct: 1999 cggtcgccgtcgacacctac 2018
to top
>ref|XM_957960.1| Neurospora crassa OR74A hypothetical protein (NCU05691.1) partial
            mRNA
          Length = 1515

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 33   gcggcggcggcgatggggat 52
            ||||||||||||||||||||
Sbjct: 1385 gcggcggcggcgatggggat 1404
to top
>ref|XM_325545.1| Neurospora crassa OR74A hypothetical protein (NCU05691.1) partial
            mRNA
          Length = 1515

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 33   gcggcggcggcgatggggat 52
            ||||||||||||||||||||
Sbjct: 1385 gcggcggcggcgatggggat 1404
to top
>emb|CR956424.18| Pig DNA sequence from clone PigE-234J24 on chromosome 6, complete
             sequence
          Length = 118731

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 25    ggagcggagcggcggcggcg 44
             ||||||||||||||||||||
Sbjct: 27184 ggagcggagcggcggcggcg 27165
to top
>emb|AL139158.11| Human DNA sequence from clone RP5-884C9 on chromosome 1p34.1-35.3,
             complete sequence
          Length = 115614

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 25    ggagcggagcggcggcggcg 44
             ||||||||||||||||||||
Sbjct: 21219 ggagcggagcggcggcggcg 21200
to top
>emb|BX294026.1|NCB7H23 Neurospora crassa DNA linkage group V BAC contig B7H23
          Length = 114377

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 121   cggtcgccgtcgacacctac 140
             ||||||||||||||||||||
Sbjct: 92453 cggtcgccgtcgacacctac 92472
to top
>emb|AL731579.4|OSJN00225 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0006A01,
              complete sequence
          Length = 143157

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 30     ggagcggcggcggcgatggggatc 53
              ||||| ||||||||||||||||||
Sbjct: 112134 ggagcagcggcggcgatggggatc 112111
to top
>emb|AJ719630.1| Gallus gallus mRNA for hypothetical protein, clone 4l11
          Length = 2702

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 25  ggagcggagcggcggcggcg 44
           ||||||||||||||||||||
Sbjct: 167 ggagcggagcggcggcggcg 186
to top
>gb|AC101941.11| Mus musculus chromosome 7, clone RP24-112F21, complete sequence
          Length = 157117

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 176    ccgcctctgcaagggcatcc 195
              ||||||||||||||||||||
Sbjct: 124396 ccgcctctgcaagggcatcc 124377
to top
>emb|BX000345.4|CNS08CDB Oryza sativa chromosome 12, . BAC OSJNBb0111J10 of library OSJNBb from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 128678

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 25     ggagcggagcggcggcggcg 44
              ||||||||||||||||||||
Sbjct: 121160 ggagcggagcggcggcggcg 121179
to top
>gb|AC027238.5| Homo sapiens chromosome 8, clone RP11-377F20, complete sequence
          Length = 193250

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 356   ggaacatgaagcagctggga 375
             ||||||||||||||||||||
Sbjct: 68867 ggaacatgaagcagctggga 68848
to top
>dbj|AK134559.1| Mus musculus adult male medulla oblongata cDNA, RIKEN full-length
           enriched library, clone:6330413C21 product:Hypothetical
           zinc finger C-x8-C-x5-C-x3-H type containing protein
           (Fragment) homolog [Mus musculus], full insert sequence
          Length = 1579

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 176 ccgcctctgcaagggcatcc 195
           ||||||||||||||||||||
Sbjct: 383 ccgcctctgcaagggcatcc 364
to top
>gb|AC013545.8| Homo sapiens chromosome 8, clone RP11-414D17, complete sequence
          Length = 200208

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 356  ggaacatgaagcagctggga 375
            ||||||||||||||||||||
Sbjct: 4651 ggaacatgaagcagctggga 4670
to top
>dbj|AK147019.1| Mus musculus 17 days pregnant adult female amnion cDNA, RIKEN
            full-length enriched library, clone:I920088G24
            product:Hypothetical zinc finger C-x8-C-x5-C-x3-H type
            containing protein, full insert sequence
          Length = 2460

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 176  ccgcctctgcaagggcatcc 195
            ||||||||||||||||||||
Sbjct: 1264 ccgcctctgcaagggcatcc 1245
to top
>dbj|AK164490.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched
           library, clone:D330008F17 product:Hypothetical zinc
           finger C-x8-C-x5-C-x3-H type containing protein, full
           insert sequence
          Length = 1650

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 176 ccgcctctgcaagggcatcc 195
           ||||||||||||||||||||
Sbjct: 721 ccgcctctgcaagggcatcc 702
to top
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 29      cggagcggcggcggcgatgg 48
               ||||||||||||||||||||
Sbjct: 2833083 cggagcggcggcggcgatgg 2833064
to top
>dbj|AK090365.1| Mus musculus 11 days embryo spinal cord cDNA, RIKEN full-length
           enriched library, clone:G630065K13 product:weakly
           similar to HYPOTHETICAL 50.9 KDA PROTEIN [Homo sapiens],
           full insert sequence
          Length = 1309

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 176 ccgcctctgcaagggcatcc 195
           ||||||||||||||||||||
Sbjct: 379 ccgcctctgcaagggcatcc 360
to top
>gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome
          Length = 5751492

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 334     aggaaaatcttgagcgtgcc 353
               ||||||||||||||||||||
Sbjct: 5573235 aggaaaatcttgagcgtgcc 5573216
to top
>dbj|AK089196.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F630035L11
           product:hypothetical Zinc finger C-x8-C-x5-C-x3-H type
           containing protein, full insert sequence
          Length = 1691

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 176 ccgcctctgcaagggcatcc 195
           ||||||||||||||||||||
Sbjct: 762 ccgcctctgcaagggcatcc 743
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 33       gcggcggcggcgatggggat 52
                ||||||||||||||||||||
Sbjct: 20060504 gcggcggcggcgatggggat 20060523



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 25      ggagcggagcggcggcggcg 44
               ||||||||||||||||||||
Sbjct: 6136450 ggagcggagcggcggcggcg 6136431
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 30       ggagcggcggcggcgatggggatc 53
                |||||| |||||||||||||||||
Sbjct: 17449198 ggagcgacggcggcgatggggatc 17449221
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 33       gcggcggcggcgatggggat 52
                ||||||||||||||||||||
Sbjct: 29490962 gcggcggcggcgatggggat 29490943



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 23       gaggagcggagcggcggcgg 42
                ||||||||||||||||||||
Sbjct: 19291996 gaggagcggagcggcggcgg 19292015
to top
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 155    gggcgccctctcctgcggcg 174
              ||||||||||||||||||||
Sbjct: 345124 gggcgccctctcctgcggcg 345105
to top
>gb|AC037425.7|AC037425 Oryza sativa chromosome 10 BAC OSJNBa0055P24 genomic sequence, complete
             sequence
          Length = 134058

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 30    ggagcggcggcggcgatggggatc 53
             |||||| |||||||||||||||||
Sbjct: 78193 ggagcgacggcggcgatggggatc 78216
to top
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 163     tctcctgcggcgaccgcctc 182
               ||||||||||||||||||||
Sbjct: 1808881 tctcctgcggcgaccgcctc 1808862
to top
>dbj|AP003983.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1038_A06
          Length = 147836

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    gcggcggcggcgatggggat 52
             ||||||||||||||||||||
Sbjct: 85992 gcggcggcggcgatggggat 85973
to top
>dbj|AP004777.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0458B05
          Length = 144917

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 23    gaggagcggagcggcggcgg 42
             ||||||||||||||||||||
Sbjct: 59794 gaggagcggagcggcggcgg 59813
to top
>dbj|AK105197.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-107-G03, full
           insert sequence
          Length = 791

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 33  gcggcggcggcgatggggat 52
           ||||||||||||||||||||
Sbjct: 102 gcggcggcggcgatggggat 121
to top
>dbj|AK073485.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033043A18, full
           insert sequence
          Length = 3481

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 30  ggagcggcggcggcgatggggatc 53
           |||||| |||||||||||||||||
Sbjct: 319 ggagcgacggcggcgatggggatc 296
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 30       ggagcggcggcggcgatggggatc 53
                |||||| |||||||||||||||||
Sbjct: 17458238 ggagcgacggcggcgatggggatc 17458261
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 33       gcggcggcggcgatggggat 52
                ||||||||||||||||||||
Sbjct: 19986718 gcggcggcggcgatggggat 19986737



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 25      ggagcggagcggcggcggcg 44
               ||||||||||||||||||||
Sbjct: 6136352 ggagcggagcggcggcggcg 6136333
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>emb|BX664712.3|CNS09SC2 Oryza sativa chromosome 12, . BAC B1373G08 of chromosome 12 of cultivar
             Nipponbare of ssp. japonica of Oryza sativa (rice),
             complete sequence
          Length = 131531

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 25    ggagcggagcggcggcggcg 44
             ||||||||||||||||||||
Sbjct: 33459 ggagcggagcggcggcggcg 33440
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>emb|AL713900.4|CNS07YQ0 Oryza sativa chromosome 12, . BAC OJ1126_F07 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 99791

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 33    gcggcggcggcgatggggat 52
             ||||||||||||||||||||
Sbjct: 40666 gcggcggcggcgatggggat 40685
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>emb|AL607004.4|OSJN00129 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNba0093F12,
             complete sequence
          Length = 186142

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 30    ggagcggcggcggcgatggggatc 53
             ||||| ||||||||||||||||||
Sbjct: 29566 ggagcagcggcggcgatggggatc 29543
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>gb|L12259.1|BOVGGFA Bos taurus glial growth factor mRNA, complete cds and flanking
          regions
          Length = 1634

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 24 aggagcggagcggcggcggc 43
          ||||||||||||||||||||
Sbjct: 47 aggagcggagcggcggcggc 66


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,393,395
Number of Sequences: 3902068
Number of extensions: 3393395
Number of successful extensions: 73012
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 71438
Number of HSP's gapped (non-prelim): 1572
length of query: 401
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 379
effective length of database: 17,147,199,772
effective search space: 6498788713588
effective search space used: 6498788713588
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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