ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl12e05 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_476019.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3273 Score = 347 bits (175), Expect = 2e-92 Identities = 295/335 (88%) Strand = Plus / Plus Query: 92 gaactacgtcgtgacggcgcacaagcccaccagcgtcagccactcctgcgtcggcaactt 151 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 12 gaactacgtcgtgacggcgcacaagcccaccagcgtcacccactcctgcgtcggcaactt 71 Query: 152 caccggcccccaccagctcaacctcatcgtcgcgaaatgcacccgcatcgagatccacct 211 |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 72 caccggccccaaccagctcaacctcatcgtcgcgaaatgcacccgtatcgagatccactt 131 Query: 212 cctcacgccgcagggcctccagccgatgctggacgtgcccatatatgggaggatcgcgac 271 || || || || ||||||||||| ||| | || || || || ||||| || ||||| || Sbjct: 132 gcttactcctcaaggcctccagcctatgattgatgtacctatctatggaagaatcgccac 191 Query: 272 gatcgagctcttccgccctcacaatgaggcccaggacttcctcttcattgccacggagag 331 | ||||||||||||||||| |||||| | ||||||||||| |||||||| || || || Sbjct: 192 actagagctcttccgccctcataatgagactcaggacttccttttcattgcgactgaaag 251 Query: 332 gtacaagttctgcgtcctgcagtgggacgcagaaaaatcagagcttctcactagatccat 391 ||||| ||||| || ||||||||||| | ||||||||| ||||||||||||||| | || Sbjct: 252 atacaaattctgtgttctgcagtgggatggagaaaaatcggagcttctcactagagcgat 311 Query: 392 gggagatgtttctgatcgcatcggccgccctacgg 426 ||||||||||||||||||||| || |||||||||| Sbjct: 312 gggagatgtttctgatcgcattggtcgccctacgg 346
>dbj|AK067427.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013107E16, full insert sequence Length = 4136 Score = 347 bits (175), Expect = 2e-92 Identities = 295/335 (88%) Strand = Plus / Plus Query: 92 gaactacgtcgtgacggcgcacaagcccaccagcgtcagccactcctgcgtcggcaactt 151 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 49 gaactacgtcgtgacggcgcacaagcccaccagcgtcacccactcctgcgtcggcaactt 108 Query: 152 caccggcccccaccagctcaacctcatcgtcgcgaaatgcacccgcatcgagatccacct 211 |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 109 caccggccccaaccagctcaacctcatcgtcgcgaaatgcacccgtatcgagatccactt 168 Query: 212 cctcacgccgcagggcctccagccgatgctggacgtgcccatatatgggaggatcgcgac 271 || || || || ||||||||||| ||| | || || || || ||||| || ||||| || Sbjct: 169 gcttactcctcaaggcctccagcctatgattgatgtacctatctatggaagaatcgccac 228 Query: 272 gatcgagctcttccgccctcacaatgaggcccaggacttcctcttcattgccacggagag 331 | ||||||||||||||||| |||||| | ||||||||||| |||||||| || || || Sbjct: 229 actagagctcttccgccctcataatgagactcaggacttccttttcattgcgactgaaag 288 Query: 332 gtacaagttctgcgtcctgcagtgggacgcagaaaaatcagagcttctcactagatccat 391 ||||| ||||| || ||||||||||| | ||||||||| ||||||||||||||| | || Sbjct: 289 atacaaattctgtgttctgcagtgggatggagaaaaatcggagcttctcactagagcgat 348 Query: 392 gggagatgtttctgatcgcatcggccgccctacgg 426 ||||||||||||||||||||| || |||||||||| Sbjct: 349 gggagatgtttctgatcgcattggtcgccctacgg 383
>dbj|AK065508.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013026I01, full insert sequence Length = 3792 Score = 347 bits (175), Expect = 2e-92 Identities = 295/335 (88%) Strand = Plus / Plus Query: 92 gaactacgtcgtgacggcgcacaagcccaccagcgtcagccactcctgcgtcggcaactt 151 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 128 gaactacgtcgtgacggcgcacaagcccaccagcgtcacccactcctgcgtcggcaactt 187 Query: 152 caccggcccccaccagctcaacctcatcgtcgcgaaatgcacccgcatcgagatccacct 211 |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 188 caccggccccaaccagctcaacctcatcgtcgcgaaatgcacccgtatcgagatccactt 247 Query: 212 cctcacgccgcagggcctccagccgatgctggacgtgcccatatatgggaggatcgcgac 271 || || || || ||||||||||| ||| | || || || || ||||| || ||||| || Sbjct: 248 gcttactcctcaaggcctccagcctatgattgatgtacctatctatggaagaatcgccac 307 Query: 272 gatcgagctcttccgccctcacaatgaggcccaggacttcctcttcattgccacggagag 331 | ||||||||||||||||| |||||| | ||||||||||| |||||||| || || || Sbjct: 308 actagagctcttccgccctcataatgagactcaggacttccttttcattgcgactgaaag 367 Query: 332 gtacaagttctgcgtcctgcagtgggacgcagaaaaatcagagcttctcactagatccat 391 ||||| ||||| || ||||||||||| | ||||||||| ||||||||||||||| | || Sbjct: 368 atacaaattctgtgttctgcagtgggatggagaaaaatcggagcttctcactagagcgat 427 Query: 392 gggagatgtttctgatcgcatcggccgccctacgg 426 ||||||||||||||||||||| || |||||||||| Sbjct: 428 gggagatgtttctgatcgcattggtcgccctacgg 462
>dbj|AB037144.1| Oryza sativa (japonica cultivar-group) OsUV-DDB mRNA for UV-damaged DNA binding protein, complete cds Length = 3658 Score = 347 bits (175), Expect = 2e-92 Identities = 295/335 (88%) Strand = Plus / Plus Query: 92 gaactacgtcgtgacggcgcacaagcccaccagcgtcagccactcctgcgtcggcaactt 151 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 128 gaactacgtcgtgacggcgcacaagcccaccagcgtcacccactcctgcgtcggcaactt 187 Query: 152 caccggcccccaccagctcaacctcatcgtcgcgaaatgcacccgcatcgagatccacct 211 |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 188 caccggccccaaccagctcaacctcatcgtcgcgaaatgcacccgtatcgagatccactt 247 Query: 212 cctcacgccgcagggcctccagccgatgctggacgtgcccatatatgggaggatcgcgac 271 || || || || ||||||||||| ||| | || || || || ||||| || ||||| || Sbjct: 248 gcttactcctcaaggcctccagcctatgattgatgtacctatctatggaagaatcgccac 307 Query: 272 gatcgagctcttccgccctcacaatgaggcccaggacttcctcttcattgccacggagag 331 | ||||||||||||||||| |||||| | ||||||||||| |||||||| || || || Sbjct: 308 actagagctcttccgccctcataatgagactcaggacttccttttcattgcgactgaaag 367 Query: 332 gtacaagttctgcgtcctgcagtgggacgcagaaaaatcagagcttctcactagatccat 391 ||||| ||||| || ||||||||||| | ||||||||| ||||||||||||||| | || Sbjct: 368 atacaaattctgtgttctgcagtgggatggagaaaaatcggagcttctcactagagcgat 427 Query: 392 gggagatgtttctgatcgcatcggccgccctacgg 426 ||||||||||||||||||||| || |||||||||| Sbjct: 428 gggagatgtttctgatcgcattggtcgccctacgg 462
>gb|AC130728.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0663C08, complete sequence Length = 142196 Score = 170 bits (86), Expect = 2e-39 Identities = 92/94 (97%) Strand = Plus / Plus Query: 92 gaactacgtcgtgacggcgcacaagcccaccagcgtcagccactcctgcgtcggcaactt 151 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 70350 gaactacgtcgtgacggcgcacaagcccaccagcgtcacccactcctgcgtcggcaactt 70409 Query: 152 caccggcccccaccagctcaacctcatcgtcgcg 185 |||||||||| ||||||||||||||||||||||| Sbjct: 70410 caccggccccaaccagctcaacctcatcgtcgcg 70443 Score = 79.8 bits (40), Expect = 7e-12 Identities = 79/92 (85%) Strand = Plus / Plus Query: 294 aatgaggcccaggacttcctcttcattgccacggagaggtacaagttctgcgtcctgcag 353 |||||| | ||||||||||| |||||||| || || || ||||| ||||| || |||||| Sbjct: 71070 aatgagactcaggacttccttttcattgcgactgaaagatacaaattctgtgttctgcag 71129 Query: 354 tgggacgcagaaaaatcagagcttctcactag 385 ||||| | ||||||||| |||||||||||||| Sbjct: 71130 tgggatggagaaaaatcggagcttctcactag 71161 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 390 atgggagatgtttctgatcgcatcggccgccctacgg 426 ||||||||||||||||||||||| || |||||||||| Sbjct: 71678 atgggagatgtttctgatcgcattggtcgccctacgg 71714 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 185 gaaatgcacccgcatcgagatccac 209 |||||||||||| |||||||||||| Sbjct: 70773 gaaatgcacccgtatcgagatccac 70797
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 170 bits (86), Expect = 2e-39 Identities = 92/94 (97%) Strand = Plus / Plus Query: 92 gaactacgtcgtgacggcgcacaagcccaccagcgtcagccactcctgcgtcggcaactt 151 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 29291693 gaactacgtcgtgacggcgcacaagcccaccagcgtcacccactcctgcgtcggcaactt 29291752 Query: 152 caccggcccccaccagctcaacctcatcgtcgcg 185 |||||||||| ||||||||||||||||||||||| Sbjct: 29291753 caccggccccaaccagctcaacctcatcgtcgcg 29291786 Score = 79.8 bits (40), Expect = 7e-12 Identities = 79/92 (85%) Strand = Plus / Plus Query: 294 aatgaggcccaggacttcctcttcattgccacggagaggtacaagttctgcgtcctgcag 353 |||||| | ||||||||||| |||||||| || || || ||||| ||||| || |||||| Sbjct: 29292413 aatgagactcaggacttccttttcattgcgactgaaagatacaaattctgtgttctgcag 29292472 Query: 354 tgggacgcagaaaaatcagagcttctcactag 385 ||||| | ||||||||| |||||||||||||| Sbjct: 29292473 tgggatggagaaaaatcggagcttctcactag 29292504 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 390 atgggagatgtttctgatcgcatcggccgccctacgg 426 ||||||||||||||||||||||| || |||||||||| Sbjct: 29293021 atgggagatgtttctgatcgcattggtcgccctacgg 29293057 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 185 gaaatgcacccgcatcgagatccac 209 |||||||||||| |||||||||||| Sbjct: 29292116 gaaatgcacccgtatcgagatccac 29292140
>ref|NM_116781.2| Arabidopsis thaliana DDB1A; DNA binding / nucleic acid binding AT4G05420 (DDB1A) mRNA, complete cds Length = 3714 Score = 65.9 bits (33), Expect = 1e-07 Identities = 96/117 (82%) Strand = Plus / Plus Query: 92 gaactacgtcgtgacggcgcacaagcccaccagcgtcagccactcctgcgtcggcaactt 151 ||||||||| || ||||| ||||| || ||||| |||| ||||| ||||| |||||||| Sbjct: 179 gaactacgttgttacggctcacaaaccgaccagtgtcactcactcgtgcgttggcaactt 238 Query: 152 caccggcccccaccagctcaacctcatcgtcgcgaaatgcacccgcatcgagatcca 208 ||| | || || ||||||| ||||| ||||||||||| || || ||||||||||| Sbjct: 239 cacaagtcctcaagagctcaatctcattgtcgcgaaatgtactcgaatcgagatcca 295
>gb|AY074258.1| Arabidopsis thaliana At4g05420 mRNA sequence Length = 1988 Score = 65.9 bits (33), Expect = 1e-07 Identities = 96/117 (82%) Strand = Plus / Plus Query: 92 gaactacgtcgtgacggcgcacaagcccaccagcgtcagccactcctgcgtcggcaactt 151 ||||||||| || ||||| ||||| || ||||| |||| ||||| ||||| |||||||| Sbjct: 134 gaactacgttgttacggctcacaaaccgaccagtgtcactcactcgtgcgttggcaactt 193 Query: 152 caccggcccccaccagctcaacctcatcgtcgcgaaatgcacccgcatcgagatcca 208 ||| | || || ||||||| ||||| ||||||||||| || || ||||||||||| Sbjct: 194 cacaagtcctcaagagctcaatctcattgtcgcgaaatgtactcgaatcgagatcca 250
>gb|BT001905.1| Arabidopsis thaliana clone C104978 putative UV-damaged DNA binding factor (At4g05420) mRNA, complete cds Length = 3298 Score = 65.9 bits (33), Expect = 1e-07 Identities = 96/117 (82%) Strand = Plus / Plus Query: 92 gaactacgtcgtgacggcgcacaagcccaccagcgtcagccactcctgcgtcggcaactt 151 ||||||||| || ||||| ||||| || ||||| |||| ||||| ||||| |||||||| Sbjct: 12 gaactacgttgttacggctcacaaaccgaccagtgtcactcactcgtgcgttggcaactt 71 Query: 152 caccggcccccaccagctcaacctcatcgtcgcgaaatgcacccgcatcgagatcca 208 ||| | || || ||||||| ||||| ||||||||||| || || ||||||||||| Sbjct: 72 cacaagtcctcaagagctcaatctcattgtcgcgaaatgtactcgaatcgagatcca 128
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 58.0 bits (29), Expect = 2e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 92 gaactacgtcgtgacggcgcacaagcccaccagcgtcagccactcctgcgtcggcaactt 151 ||||||||| |||||||||||||||| || |||| || |||||||||||||||||| Sbjct: 22752243 gaactacgtggtgacggcgcacaagctgacggtcgtcgcccgctcctgcgtcggcaactt 22752302 Query: 152 caccg 156 ||||| Sbjct: 22752303 caccg 22752307
>dbj|AP003341.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0024F06 Length = 129402 Score = 58.0 bits (29), Expect = 2e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 92 gaactacgtcgtgacggcgcacaagcccaccagcgtcagccactcctgcgtcggcaactt 151 ||||||||| |||||||||||||||| || |||| || |||||||||||||||||| Sbjct: 128955 gaactacgtggtgacggcgcacaagctgacggtcgtcgcccgctcctgcgtcggcaactt 129014 Query: 152 caccg 156 ||||| Sbjct: 129015 caccg 129019
>dbj|AP003492.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0712E02 Length = 158084 Score = 58.0 bits (29), Expect = 2e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 92 gaactacgtcgtgacggcgcacaagcccaccagcgtcagccactcctgcgtcggcaactt 151 ||||||||| |||||||||||||||| || |||| || |||||||||||||||||| Sbjct: 69632 gaactacgtggtgacggcgcacaagctgacggtcgtcgcccgctcctgcgtcggcaactt 69691 Query: 152 caccg 156 ||||| Sbjct: 69692 caccg 69696
>dbj|AK103584.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133B01, full insert sequence Length = 663 Score = 58.0 bits (29), Expect = 2e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 92 gaactacgtcgtgacggcgcacaagcccaccagcgtcagccactcctgcgtcggcaactt 151 ||||||||| |||||||||||||||| || |||| || |||||||||||||||||| Sbjct: 150 gaactacgtggtgacggcgcacaagctgacggtcgtcgcccgctcctgcgtcggcaactt 209 Query: 152 caccg 156 ||||| Sbjct: 210 caccg 214
>emb|AL161503.2|ATCHRIV15 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 15 Length = 199987 Score = 46.1 bits (23), Expect = 0.093 Identities = 53/63 (84%) Strand = Plus / Plus Query: 92 gaactacgtcgtgacggcgcacaagcccaccagcgtcagccactcctgcgtcggcaactt 151 ||||||||| || ||||| ||||| || ||||| |||| ||||| ||||| |||||||| Sbjct: 84751 gaactacgttgttacggctcacaaaccgaccagtgtcactcactcgtgcgttggcaactt 84810 Query: 152 cac 154 ||| Sbjct: 84811 cac 84813
>gb|AC012477.1|AC012477 Genomic Sequence For Arabidopsis thaliana Clone C6L9, Chromosome IV, complete sequence Length = 145453 Score = 46.1 bits (23), Expect = 0.093 Identities = 53/63 (84%) Strand = Plus / Minus Query: 92 gaactacgtcgtgacggcgcacaagcccaccagcgtcagccactcctgcgtcggcaactt 151 ||||||||| || ||||| ||||| || ||||| |||| ||||| ||||| |||||||| Sbjct: 30543 gaactacgttgttacggctcacaaaccgaccagtgtcactcactcgtgcgttggcaactt 30484 Query: 152 cac 154 ||| Sbjct: 30483 cac 30481
>gb|AY452480.1| Lycopersicon esculentum UV damaged DNA binding protein 1 (DDB1) mRNA, complete cds Length = 3273 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 246 gtgcccatatatgggaggatcgcgac 271 ||||| |||||||||||||||||||| Sbjct: 166 gtgccaatatatgggaggatcgcgac 191
>gb|AY531661.1| Lycopersicon cheesmanii UV-damaged DNA binding protein 1 (hp1) gene, promoter and complete cds Length = 23464 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 246 gtgcccatatatgggaggatcgcgac 271 ||||| |||||||||||||||||||| Sbjct: 7520 gtgccaatatatgggaggatcgcgac 7545
>gb|AY531660.1| Lycopersicon esculentum UV-damaged DNA binding protein 1 (hp1) mRNA, complete cds Length = 3454 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 246 gtgcccatatatgggaggatcgcgac 271 ||||| |||||||||||||||||||| Sbjct: 218 gtgccaatatatgggaggatcgcgac 243
>gb|AC167930.2| Mycosphaerella graminicola clone JGIBBWB-9O6, complete sequence Length = 29883 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 atctctcctaccacctctcc 21 |||||||||||||||||||| Sbjct: 3533 atctctcctaccacctctcc 3552
>ref|XM_756092.1| Ustilago maydis 521 hypothetical protein (UM05038.1) partial mRNA Length = 3393 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 agaggtacaagttctgcgtc 347 |||||||||||||||||||| Sbjct: 3187 agaggtacaagttctgcgtc 3168
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome Length = 2462499 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 223 agggcctccagccgatgctggacg 246 ||||| |||||||||||||||||| Sbjct: 2141500 agggcatccagccgatgctggacg 2141477
>gb|AC126248.3| Mus musculus BAC clone RP24-422C6 from chromosome 3, complete sequence Length = 192092 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 tctcctaccacctctccacc 24 |||||||||||||||||||| Sbjct: 56842 tctcctaccacctctccacc 56823
>gb|AC126557.3| Mus musculus BAC clone RP23-201J9 from 3, complete sequence Length = 176278 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 tctcctaccacctctccacc 24 |||||||||||||||||||| Sbjct: 149120 tctcctaccacctctccacc 149101
>emb|CR731415.2|CNS0GRB0 Tetraodon nigroviridis full-length cDNA Length = 1171 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 cccaccagctcaacctcatc 179 |||||||||||||||||||| Sbjct: 479 cccaccagctcaacctcatc 498
>emb|CR711553.2|CNS0GBZH Tetraodon nigroviridis full-length cDNA Length = 868 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 cccaccagctcaacctcatc 179 |||||||||||||||||||| Sbjct: 466 cccaccagctcaacctcatc 485
>emb|CR711538.2|CNS0GBZ2 Tetraodon nigroviridis full-length cDNA Length = 828 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 cccaccagctcaacctcatc 179 |||||||||||||||||||| Sbjct: 455 cccaccagctcaacctcatc 474
>emb|CR725308.2|CNS0GMLE Tetraodon nigroviridis full-length cDNA Length = 1155 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 cccaccagctcaacctcatc 179 |||||||||||||||||||| Sbjct: 464 cccaccagctcaacctcatc 483
>emb|CR725524.2|CNS0GMRE Tetraodon nigroviridis full-length cDNA Length = 1170 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 cccaccagctcaacctcatc 179 |||||||||||||||||||| Sbjct: 479 cccaccagctcaacctcatc 498
>emb|CR720140.2|CNS0GILU Tetraodon nigroviridis full-length cDNA Length = 1155 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 cccaccagctcaacctcatc 179 |||||||||||||||||||| Sbjct: 464 cccaccagctcaacctcatc 483
>emb|CR723464.2|CNS0GL66 Tetraodon nigroviridis full-length cDNA Length = 1128 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 cccaccagctcaacctcatc 179 |||||||||||||||||||| Sbjct: 450 cccaccagctcaacctcatc 469
>emb|CR722209.2|CNS0GK7B Tetraodon nigroviridis full-length cDNA Length = 828 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 cccaccagctcaacctcatc 179 |||||||||||||||||||| Sbjct: 455 cccaccagctcaacctcatc 474
>emb|CR722001.2|CNS0GK1J Tetraodon nigroviridis full-length cDNA Length = 830 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 cccaccagctcaacctcatc 179 |||||||||||||||||||| Sbjct: 460 cccaccagctcaacctcatc 479
>emb|CR721896.2|CNS0GJYM Tetraodon nigroviridis full-length cDNA Length = 852 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 cccaccagctcaacctcatc 179 |||||||||||||||||||| Sbjct: 480 cccaccagctcaacctcatc 499
>emb|CR721435.2|CNS0GJLT Tetraodon nigroviridis full-length cDNA Length = 853 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 cccaccagctcaacctcatc 179 |||||||||||||||||||| Sbjct: 480 cccaccagctcaacctcatc 499
>emb|CR721410.2|CNS0GJL4 Tetraodon nigroviridis full-length cDNA Length = 855 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 cccaccagctcaacctcatc 179 |||||||||||||||||||| Sbjct: 482 cccaccagctcaacctcatc 501
>emb|CR720800.2|CNS0GJ46 Tetraodon nigroviridis full-length cDNA Length = 834 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 cccaccagctcaacctcatc 179 |||||||||||||||||||| Sbjct: 461 cccaccagctcaacctcatc 480
>emb|CR720362.2|CNS0GIS0 Tetraodon nigroviridis full-length cDNA Length = 759 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 cccaccagctcaacctcatc 179 |||||||||||||||||||| Sbjct: 387 cccaccagctcaacctcatc 406
>emb|CR719170.2|CNS0GHUW Tetraodon nigroviridis full-length cDNA Length = 853 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 cccaccagctcaacctcatc 179 |||||||||||||||||||| Sbjct: 480 cccaccagctcaacctcatc 499
>emb|CR718317.2|CNS0GH77 Tetraodon nigroviridis full-length cDNA Length = 828 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 cccaccagctcaacctcatc 179 |||||||||||||||||||| Sbjct: 455 cccaccagctcaacctcatc 474
>emb|CR718205.2|CNS0GH43 Tetraodon nigroviridis full-length cDNA Length = 828 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 cccaccagctcaacctcatc 179 |||||||||||||||||||| Sbjct: 455 cccaccagctcaacctcatc 474
>emb|CR718053.2|CNS0GGZV Tetraodon nigroviridis full-length cDNA Length = 562 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 cccaccagctcaacctcatc 179 |||||||||||||||||||| Sbjct: 189 cccaccagctcaacctcatc 208
>emb|CR717399.2|CNS0GGHP Tetraodon nigroviridis full-length cDNA Length = 829 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 cccaccagctcaacctcatc 179 |||||||||||||||||||| Sbjct: 456 cccaccagctcaacctcatc 475
>emb|CR717236.2|CNS0GGD7 Tetraodon nigroviridis full-length cDNA Length = 829 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 cccaccagctcaacctcatc 179 |||||||||||||||||||| Sbjct: 456 cccaccagctcaacctcatc 475
>emb|CR716642.2|CNS0GFWR Tetraodon nigroviridis full-length cDNA Length = 864 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 cccaccagctcaacctcatc 179 |||||||||||||||||||| Sbjct: 489 cccaccagctcaacctcatc 508
>emb|CR716290.2|CNS0GFMZ Tetraodon nigroviridis full-length cDNA Length = 867 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 cccaccagctcaacctcatc 179 |||||||||||||||||||| Sbjct: 494 cccaccagctcaacctcatc 513
>emb|CR715062.2|CNS0GEOY Tetraodon nigroviridis full-length cDNA Length = 867 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 cccaccagctcaacctcatc 179 |||||||||||||||||||| Sbjct: 494 cccaccagctcaacctcatc 513
>emb|CR711341.2|CNS0GBTL Tetraodon nigroviridis full-length cDNA Length = 861 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 cccaccagctcaacctcatc 179 |||||||||||||||||||| Sbjct: 488 cccaccagctcaacctcatc 507
>emb|CR714212.2|CNS0GE1C Tetraodon nigroviridis full-length cDNA Length = 853 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 cccaccagctcaacctcatc 179 |||||||||||||||||||| Sbjct: 480 cccaccagctcaacctcatc 499
>emb|CR714547.2|CNS0GEAN Tetraodon nigroviridis full-length cDNA Length = 828 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 cccaccagctcaacctcatc 179 |||||||||||||||||||| Sbjct: 455 cccaccagctcaacctcatc 474
>emb|CR710701.2|CNS0GBBT Tetraodon nigroviridis full-length cDNA Length = 861 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 cccaccagctcaacctcatc 179 |||||||||||||||||||| Sbjct: 488 cccaccagctcaacctcatc 507
>emb|CR709662.2|CNS0GAIY Tetraodon nigroviridis full-length cDNA Length = 836 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 cccaccagctcaacctcatc 179 |||||||||||||||||||| Sbjct: 488 cccaccagctcaacctcatc 507
>emb|CR707849.2|CNS0G94L Tetraodon nigroviridis full-length cDNA Length = 853 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 cccaccagctcaacctcatc 179 |||||||||||||||||||| Sbjct: 480 cccaccagctcaacctcatc 499
>emb|CR705121.2|CNS0G70T Tetraodon nigroviridis full-length cDNA Length = 829 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 cccaccagctcaacctcatc 179 |||||||||||||||||||| Sbjct: 456 cccaccagctcaacctcatc 475
>emb|CR694395.2|CNS0FYQV Tetraodon nigroviridis full-length cDNA Length = 1152 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 cccaccagctcaacctcatc 179 |||||||||||||||||||| Sbjct: 461 cccaccagctcaacctcatc 480
>emb|CR684880.2|CNS0FREK Tetraodon nigroviridis full-length cDNA Length = 1282 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 cccaccagctcaacctcatc 179 |||||||||||||||||||| Sbjct: 456 cccaccagctcaacctcatc 475
>emb|CR679778.2|CNS0FNGU Tetraodon nigroviridis full-length cDNA Length = 1181 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 cccaccagctcaacctcatc 179 |||||||||||||||||||| Sbjct: 490 cccaccagctcaacctcatc 509
>emb|CR673578.2|CNS0FIPC Tetraodon nigroviridis full-length cDNA Length = 1182 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 cccaccagctcaacctcatc 179 |||||||||||||||||||| Sbjct: 491 cccaccagctcaacctcatc 510
>emb|CR666822.2|CNS0FDHO Tetraodon nigroviridis full-length cDNA Length = 851 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 cccaccagctcaacctcatc 179 |||||||||||||||||||| Sbjct: 480 cccaccagctcaacctcatc 499
>emb|CR654814.2|CNS0F484 Tetraodon nigroviridis full-length cDNA Length = 851 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 cccaccagctcaacctcatc 179 |||||||||||||||||||| Sbjct: 478 cccaccagctcaacctcatc 497
>emb|CR651687.2|CNS0F1T9 Tetraodon nigroviridis full-length cDNA Length = 776 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 cccaccagctcaacctcatc 179 |||||||||||||||||||| Sbjct: 403 cccaccagctcaacctcatc 422
>emb|CR651566.2|CNS0F1PW Tetraodon nigroviridis full-length cDNA Length = 829 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 cccaccagctcaacctcatc 179 |||||||||||||||||||| Sbjct: 456 cccaccagctcaacctcatc 475
>emb|CR649464.2|CNS0F03I Tetraodon nigroviridis full-length cDNA Length = 835 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 cccaccagctcaacctcatc 179 |||||||||||||||||||| Sbjct: 462 cccaccagctcaacctcatc 481
>emb|CR646110.2|CNS0EXIC Tetraodon nigroviridis full-length cDNA Length = 752 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 cccaccagctcaacctcatc 179 |||||||||||||||||||| Sbjct: 379 cccaccagctcaacctcatc 398
>emb|CR641926.2|CNS0EUA4 Tetraodon nigroviridis full-length cDNA Length = 427 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 cccaccagctcaacctcatc 179 |||||||||||||||||||| Sbjct: 54 cccaccagctcaacctcatc 73
>emb|CR641209.2|CNS0ETQ7 Tetraodon nigroviridis full-length cDNA Length = 861 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 cccaccagctcaacctcatc 179 |||||||||||||||||||| Sbjct: 488 cccaccagctcaacctcatc 507
>emb|CR636997.2|CNS0EQH7 Tetraodon nigroviridis full-length cDNA Length = 1155 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 cccaccagctcaacctcatc 179 |||||||||||||||||||| Sbjct: 464 cccaccagctcaacctcatc 483
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 143 cggcaacttcaccggcccccacca 166 ||||||| |||||||||||||||| Sbjct: 2974557 cggcaacatcaccggcccccacca 2974580
>gb|AC027309.3| Homo sapiens chromosome 5 clone CTB-79E8, complete sequence Length = 189479 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 31 cagagcccagaaccctcctcctcc 54 ||||||||||||||||||| |||| Sbjct: 32900 cagagcccagaaccctccttctcc 32877
>gb|AC161106.13| Medicago truncatula clone mth2-168f23, complete sequence Length = 94766 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 132 cactcctgcgtcggcaacttcacc 155 ||||||||||||||||| |||||| Sbjct: 10651 cactcctgcgtcggcaatttcacc 10628
>gb|AC011407.6| Homo sapiens chromosome 5 clone CTB-54I1, complete sequence Length = 240957 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 31 cagagcccagaaccctcctcctcc 54 ||||||||||||||||||| |||| Sbjct: 232583 cagagcccagaaccctccttctcc 232560
>gb|AC104071.3| Homo sapiens BAC clone RP11-315A17 from 4, complete sequence Length = 184001 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 1 catctctcctaccacctctccacc 24 |||||| ||||||||||||||||| Sbjct: 134944 catctcccctaccacctctccacc 134967
>gb|AC020734.6| Homo sapiens BAC clone RP11-665I14 from 4, complete sequence Length = 196550 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 1 catctctcctaccacctctccacc 24 |||||| ||||||||||||||||| Sbjct: 156327 catctcccctaccacctctccacc 156304
>emb|AJ622830.1| Ustilago maydis acu2 gene for K, P-type ATPase Length = 3393 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 agaggtacaagttctgcgtc 347 |||||||||||||||||||| Sbjct: 3187 agaggtacaagttctgcgtc 3168
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 106 cggcgcacaagcccaccagc 125 |||||||||||||||||||| Sbjct: 7024631 cggcgcacaagcccaccagc 7024650
>gb|U17352.1|TAU17352 Thermus aquaticus L-glutamine:D-fructose-6-P amidotransferase (glmS) gene, complete cds and s-layer P100 (slp) gene, partial cds Length = 2560 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 aggcccaggacttcctcttc 317 |||||||||||||||||||| Sbjct: 1910 aggcccaggacttcctcttc 1929
>emb|CT573045.6| Pig DNA sequence from clone CH242-519K3 on chromosome 17, complete sequence Length = 105913 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 ccagaaccctcctcctcctc 56 |||||||||||||||||||| Sbjct: 12671 ccagaaccctcctcctcctc 12652 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,516,081 Number of Sequences: 3902068 Number of extensions: 3516081 Number of successful extensions: 72054 Number of sequences better than 10.0: 76 Number of HSP's better than 10.0 without gapping: 76 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 71781 Number of HSP's gapped (non-prelim): 266 length of query: 428 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 406 effective length of database: 17,147,199,772 effective search space: 6961763107432 effective search space used: 6961763107432 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
