>dbj|AK099999.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013134K18, full
           insert sequence
          Length = 3073

 Score =  351 bits (177), Expect = 1e-93
 Identities = 249/273 (91%)
 Strand = Plus / Plus

                                                                       
Query: 94  ggagatgggcggctggtcagagcttctcaacacctccaccaagctcctcgagcaggccgc 153
           |||||||||||| ||||| ||||| ||| || ||||||| ||||||||||||||||||||
Sbjct: 120 ggagatgggcgggtggtcggagctcctccactcctccactaagctcctcgagcaggccgc 179

                                                                       
Query: 154 cctcacccctcacttccctgccctccagaggaacctggaccagctcgaggtgctctccac 213
           || |||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||
Sbjct: 180 ccccaccccgcacttccctcccctccagaggaacctggaccagctggaggtgctctccac 239

                                                                       
Query: 214 caagctcaaggccaagacgatccgcgccgaggcgccgtcacagtcgctctccgccaccag 273
           ||||||||||||||||||| | ||||||||||||||    ||||||||||||||||||||
Sbjct: 240 caagctcaaggccaagacggtgcgcgccgaggcgcccgtgcagtcgctctccgccaccag 299

                                                                       
Query: 274 gttgctggcgcgcgaggggatcaatgctgagcagctcaccagagacctcaagtcattcga 333
           |||| |||||||||||||||||||||| ||||||||| |||| |||||||| || |||||
Sbjct: 300 gttgttggcgcgcgaggggatcaatgcggagcagctcgccagggacctcaaatccttcga 359

                                            
Query: 334 actcaagaccacctttgaggatgtttttccatc 366
           ||| |||||||| ||||||||||||||||||||
Sbjct: 360 acttaagaccacatttgaggatgtttttccatc 392



 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 51 cggcggcgatggccggcgtcgg 72
          ||||||||||||||||||||||
Sbjct: 71 cggcggcgatggccggcgtcgg 92

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  137 bits (69), Expect = 3e-29
 Identities = 90/97 (92%)
 Strand = Plus / Minus

                                                                            
Query: 179      cagaggaacctggaccagctcgaggtgctctccaccaagctcaaggccaagacgatccgc 238
                |||||||||||||||||||| ||||||||||||||||||||||||||||||||| | |||
Sbjct: 13083469 cagaggaacctggaccagctggaggtgctctccaccaagctcaaggccaagacggtgcgc 13083410

                                                     
Query: 239      gccgaggcgccgtcacagtcgctctccgccaccaggt 275
                |||||||||||    ||||||||||||||||||||||
Sbjct: 13083409 gccgaggcgcccgtgcagtcgctctccgccaccaggt 13083373



 Score =  103 bits (52), Expect = 4e-19
 Identities = 79/88 (89%)
 Strand = Plus / Minus

                                                                            
Query: 94       ggagatgggcggctggtcagagcttctcaacacctccaccaagctcctcgagcaggccgc 153
                |||||||||||| ||||| ||||| ||| || ||||||| ||||||||||||||||||||
Sbjct: 13083671 ggagatgggcgggtggtcggagctcctccactcctccactaagctcctcgagcaggccgc 13083612

                                            
Query: 154      cctcacccctcacttccctgccctccag 181
                || |||||| ||||||||| ||||||||
Sbjct: 13083611 ccccaccccgcacttccctcccctccag 13083584



 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 60/66 (90%)
 Strand = Plus / Minus

                                                                            
Query: 271      caggttgctggcgcgcgaggggatcaatgctgagcagctcaccagagacctcaagtcatt 330
                ||||||| |||||||||||||||||||||| ||||||||| |||| |||||||| || ||
Sbjct: 13083236 caggttgttggcgcgcgaggggatcaatgcggagcagctcgccagggacctcaaatcctt 13083177

                      
Query: 331      cgaact 336
                ||||||
Sbjct: 13083176 cgaact 13083171



 Score = 48.1 bits (24), Expect = 0.022
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                            
Query: 339      agaccacctttgaggatgtttttccatc 366
                ||||||| ||||||||||||||||||||
Sbjct: 13082175 agaccacatttgaggatgtttttccatc 13082148



 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 51       cggcggcgatggccggcgtcgg 72
                ||||||||||||||||||||||
Sbjct: 13083720 cggcggcgatggccggcgtcgg 13083699

>gb|AC135257.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1113A07,
              from chromosome 3, complete sequence
          Length = 151173

 Score =  137 bits (69), Expect = 3e-29
 Identities = 90/97 (92%)
 Strand = Plus / Plus

                                                                          
Query: 179    cagaggaacctggaccagctcgaggtgctctccaccaagctcaaggccaagacgatccgc 238
              |||||||||||||||||||| ||||||||||||||||||||||||||||||||| | |||
Sbjct: 143169 cagaggaacctggaccagctggaggtgctctccaccaagctcaaggccaagacggtgcgc 143228

                                                   
Query: 239    gccgaggcgccgtcacagtcgctctccgccaccaggt 275
              |||||||||||    ||||||||||||||||||||||
Sbjct: 143229 gccgaggcgcccgtgcagtcgctctccgccaccaggt 143265



 Score =  103 bits (52), Expect = 4e-19
 Identities = 79/88 (89%)
 Strand = Plus / Plus

                                                                          
Query: 94     ggagatgggcggctggtcagagcttctcaacacctccaccaagctcctcgagcaggccgc 153
              |||||||||||| ||||| ||||| ||| || ||||||| ||||||||||||||||||||
Sbjct: 142967 ggagatgggcgggtggtcggagctcctccactcctccactaagctcctcgagcaggccgc 143026

                                          
Query: 154    cctcacccctcacttccctgccctccag 181
              || |||||| ||||||||| ||||||||
Sbjct: 143027 ccccaccccgcacttccctcccctccag 143054



 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 60/66 (90%)
 Strand = Plus / Plus

                                                                          
Query: 271    caggttgctggcgcgcgaggggatcaatgctgagcagctcaccagagacctcaagtcatt 330
              ||||||| |||||||||||||||||||||| ||||||||| |||| |||||||| || ||
Sbjct: 143402 caggttgttggcgcgcgaggggatcaatgcggagcagctcgccagggacctcaaatcctt 143461

                    
Query: 331    cgaact 336
              ||||||
Sbjct: 143462 cgaact 143467



 Score = 48.1 bits (24), Expect = 0.022
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                          
Query: 339    agaccacctttgaggatgtttttccatc 366
              ||||||| ||||||||||||||||||||
Sbjct: 144463 agaccacatttgaggatgtttttccatc 144490



 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 51     cggcggcgatggccggcgtcgg 72
              ||||||||||||||||||||||
Sbjct: 142918 cggcggcgatggccggcgtcgg 142939

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  137 bits (69), Expect = 3e-29
 Identities = 90/97 (92%)
 Strand = Plus / Minus

                                                                            
Query: 179      cagaggaacctggaccagctcgaggtgctctccaccaagctcaaggccaagacgatccgc 238
                |||||||||||||||||||| ||||||||||||||||||||||||||||||||| | |||
Sbjct: 13080244 cagaggaacctggaccagctggaggtgctctccaccaagctcaaggccaagacggtgcgc 13080185

                                                     
Query: 239      gccgaggcgccgtcacagtcgctctccgccaccaggt 275
                |||||||||||    ||||||||||||||||||||||
Sbjct: 13080184 gccgaggcgcccgtgcagtcgctctccgccaccaggt 13080148



 Score =  103 bits (52), Expect = 4e-19
 Identities = 79/88 (89%)
 Strand = Plus / Minus

                                                                            
Query: 94       ggagatgggcggctggtcagagcttctcaacacctccaccaagctcctcgagcaggccgc 153
                |||||||||||| ||||| ||||| ||| || ||||||| ||||||||||||||||||||
Sbjct: 13080446 ggagatgggcgggtggtcggagctcctccactcctccactaagctcctcgagcaggccgc 13080387

                                            
Query: 154      cctcacccctcacttccctgccctccag 181
                || |||||| ||||||||| ||||||||
Sbjct: 13080386 ccccaccccgcacttccctcccctccag 13080359



 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 60/66 (90%)
 Strand = Plus / Minus

                                                                            
Query: 271      caggttgctggcgcgcgaggggatcaatgctgagcagctcaccagagacctcaagtcatt 330
                ||||||| |||||||||||||||||||||| ||||||||| |||| |||||||| || ||
Sbjct: 13080011 caggttgttggcgcgcgaggggatcaatgcggagcagctcgccagggacctcaaatcctt 13079952

                      
Query: 331      cgaact 336
                ||||||
Sbjct: 13079951 cgaact 13079946



 Score = 48.1 bits (24), Expect = 0.022
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                            
Query: 339      agaccacctttgaggatgtttttccatc 366
                ||||||| ||||||||||||||||||||
Sbjct: 13078950 agaccacatttgaggatgtttttccatc 13078923



 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 51       cggcggcgatggccggcgtcgg 72
                ||||||||||||||||||||||
Sbjct: 13080495 cggcggcgatggccggcgtcgg 13080474

>gb|AC134231.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0006D11,
              complete sequence
          Length = 176637

 Score =  137 bits (69), Expect = 3e-29
 Identities = 90/97 (92%)
 Strand = Plus / Minus

                                                                          
Query: 179    cagaggaacctggaccagctcgaggtgctctccaccaagctcaaggccaagacgatccgc 238
              |||||||||||||||||||| ||||||||||||||||||||||||||||||||| | |||
Sbjct: 161167 cagaggaacctggaccagctggaggtgctctccaccaagctcaaggccaagacggtgcgc 161108

                                                   
Query: 239    gccgaggcgccgtcacagtcgctctccgccaccaggt 275
              |||||||||||    ||||||||||||||||||||||
Sbjct: 161107 gccgaggcgcccgtgcagtcgctctccgccaccaggt 161071



 Score =  103 bits (52), Expect = 4e-19
 Identities = 79/88 (89%)
 Strand = Plus / Minus

                                                                          
Query: 94     ggagatgggcggctggtcagagcttctcaacacctccaccaagctcctcgagcaggccgc 153
              |||||||||||| ||||| ||||| ||| || ||||||| ||||||||||||||||||||
Sbjct: 161369 ggagatgggcgggtggtcggagctcctccactcctccactaagctcctcgagcaggccgc 161310

                                          
Query: 154    cctcacccctcacttccctgccctccag 181
              || |||||| ||||||||| ||||||||
Sbjct: 161309 ccccaccccgcacttccctcccctccag 161282



 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 60/66 (90%)
 Strand = Plus / Minus

                                                                          
Query: 271    caggttgctggcgcgcgaggggatcaatgctgagcagctcaccagagacctcaagtcatt 330
              ||||||| |||||||||||||||||||||| ||||||||| |||| |||||||| || ||
Sbjct: 160934 caggttgttggcgcgcgaggggatcaatgcggagcagctcgccagggacctcaaatcctt 160875

                    
Query: 331    cgaact 336
              ||||||
Sbjct: 160874 cgaact 160869



 Score = 48.1 bits (24), Expect = 0.022
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                          
Query: 339    agaccacctttgaggatgtttttccatc 366
              ||||||| ||||||||||||||||||||
Sbjct: 159873 agaccacatttgaggatgtttttccatc 159846



 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 51     cggcggcgatggccggcgtcgg 72
              ||||||||||||||||||||||
Sbjct: 161418 cggcggcgatggccggcgtcgg 161397

>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 46.1 bits (23), Expect = 0.086
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 61      ggccggcgtcggagccgatggcg 83
               |||||||||||||||||||||||
Sbjct: 1059520 ggccggcgtcggagccgatggcg 1059542

>gb|CP000272.1| Burkholderia xenovorans LB400 chromosome 3, complete sequence
          Length = 1471779

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 51    cggcggcgatggccggcgtcgg 72
             ||||||||||||||||||||||
Sbjct: 60167 cggcggcgatggccggcgtcgg 60146

>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 235     ccgcgccgaggcgccgtcacagtcgc 260
               |||||||| |||||||||||||||||
Sbjct: 1339088 ccgcgccgcggcgccgtcacagtcgc 1339113

>gb|AC090064.3| Homo sapiens chromosome 5 clone CTB-43C3, complete sequence
          Length = 124882

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 304   gcagctcaccagagacctcaa 324
             |||||||||||||||||||||
Sbjct: 93519 gcagctcaccagagacctcaa 93539

>gb|AC011407.6| Homo sapiens chromosome 5 clone CTB-54I1, complete sequence
          Length = 240957

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 304   gcagctcaccagagacctcaa 324
             |||||||||||||||||||||
Sbjct: 67614 gcagctcaccagagacctcaa 67634

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 51       cggcggcgatggccggcgtcg 71
                |||||||||||||||||||||
Sbjct: 16070864 cggcggcgatggccggcgtcg 16070884

>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 142     cgagcaggccgccctcacccc 162
               |||||||||||||||||||||
Sbjct: 3564437 cgagcaggccgccctcacccc 3564457

>dbj|AP005833.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1328_D07
          Length = 155007

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 51    cggcggcgatggccggcgtcg 71
             |||||||||||||||||||||
Sbjct: 71077 cggcggcgatggccggcgtcg 71097

>gb|AC160538.8| Mus musculus chromosome 15, clone RP24-156D3, complete sequence
          Length = 158943

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 200   gaggtgctctccaccaagct 219
             ||||||||||||||||||||
Sbjct: 35514 gaggtgctctccaccaagct 35533

>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome
          Length = 3402093

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 277    gctggcgcgcgaggggatca 296
              ||||||||||||||||||||
Sbjct: 188132 gctggcgcgcgaggggatca 188151

>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence
          Length = 2580084

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 210    ccaccaagctcaaggccaag 229
              ||||||||||||||||||||
Sbjct: 869628 ccaccaagctcaaggccaag 869609

>gb|AC113976.13| Mus musculus chromosome 15, clone RP23-146F23, complete sequence
          Length = 184010

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 200   gaggtgctctccaccaagct 219
             ||||||||||||||||||||
Sbjct: 69453 gaggtgctctccaccaagct 69434

>emb|AL117382.28|HSJ881L22 Human DNA sequence from clone RP5-881L22 on chromosome 20 Contains the
             3' end of the GDAP1L1 gene for ganglioside-induced
             differentiation-associated protein 1-like 1, the R3HDML
             gene for R3HDML domain containing-like, the C20orf142
             gene, three novel genes, the 5' end of one variant of the
             HNF4A gene for hepatocyte nuclear factor 4 and two CpG
             islands, complete sequence
          Length = 131841

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 152   gccctcacccctcacttccctgccctcc 179
             |||||||||||||||| | |||||||||
Sbjct: 66734 gccctcacccctcactgctctgccctcc 66761

>emb|BX640444.1| Bordetella bronchiseptica strain RB50, complete genome; segment 8/16
          Length = 349008

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 51     cggcggcgatggccggcgtc 70
              ||||||||||||||||||||
Sbjct: 152689 cggcggcgatggccggcgtc 152670

>emb|BX640427.1| Bordetella parapertussis strain 12822, complete genome; segment 5/14
          Length = 348997

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 51    cggcggcgatggccggcgtc 70
             ||||||||||||||||||||
Sbjct: 75743 cggcggcgatggccggcgtc 75724

>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 228     agacgatccgcgccgaggcg 247
               ||||||||||||||||||||
Sbjct: 1983654 agacgatccgcgccgaggcg 1983673

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 71      ggagccgatggcggaggaga 90
               ||||||||||||||||||||
Sbjct: 6280661 ggagccgatggcggaggaga 6280680

>dbj|AP004002.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1116_C08
          Length = 102317

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 71    ggagccgatggcggaggaga 90
             ||||||||||||||||||||
Sbjct: 31221 ggagccgatggcggaggaga 31240

>emb|CT573035.8| Mouse DNA sequence from clone RP23-331B8 on chromosome 14, complete
             sequence
          Length = 115207

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 153   ccctcacccctcacttccct 172
             ||||||||||||||||||||
Sbjct: 97202 ccctcacccctcacttccct 97183


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,949,308
Number of Sequences: 3902068
Number of extensions: 2949308
Number of successful extensions: 69731
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 68920
Number of HSP's gapped (non-prelim): 806
length of query: 399
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 377
effective length of database: 17,147,199,772
effective search space: 6464494314044
effective search space used: 6464494314044
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)