>ref|XM_470529.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2514

 Score =  240 bits (121), Expect = 3e-60
 Identities = 277/329 (84%)
 Strand = Plus / Plus

                                                                       
Query: 93  gatgaccgcatccgcagcttcgaggacttcgcgagggtgcaccagttcctgctgattgcg 152
           ||||| |||||||| |||| |||||| |||||||||||||||  || |||||||   || 
Sbjct: 25  gatgatcgcatccggagctacgaggatttcgcgagggtgcacgcgtacctgctggccgca 84

                                                                       
Query: 153 gccggcgtgccgtcgtcgctgcatcggcggctgtaccgcaagctcgccgacgaggtgttc 212
            ||||  | ||| |||||||||| | |||||| |||||||||||||||||||||||||||
Sbjct: 85  tccgggatcccgccgtcgctgcaccagcggctttaccgcaagctcgccgacgaggtgttc 144

                                                                       
Query: 213 gacggcggggagagcttctccgtcgagccctgcgaggaagggaggcagcgccgcctcgtg 272
           ||||||||||||  |||||| || ||||||||||||| ||||||||||||  | ||||| 
Sbjct: 145 gacggcggggaggccttctcggtagagccctgcgagggagggaggcagcggaggctcgtt 204

                                                                       
Query: 273 ctcgcctccggggcgcctcttgggagcgaggcggacgtcttcctcgtcgaccacgcgtgg 332
           |||||| | | |  | |||| ||||| ||| | || |||||||||||||||||||| |||
Sbjct: 205 ctcgccgctgagtggactctagggagggagtccgatgtcttcctcgtcgaccacgcctgg 264

                                                                       
Query: 333 tccttccgcctctccgatgcgctcaagcagctacgtgaagtaccaggattggccgagaga 392
           ||||||||||||||||||||||| |||||| |  | |||||||||||| |||| || |||
Sbjct: 265 tccttccgcctctccgatgcgcttaagcagttgagggaagtaccaggactggctgaaaga 324

                                        
Query: 393 atggcagctctaatgtgcgtggatctgga 421
           ||||||||  | ||||| |||||||||||
Sbjct: 325 atggcagcattgatgtgtgtggatctgga 353

>dbj|AK069518.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023024A16, full
           insert sequence
          Length = 2951

 Score =  240 bits (121), Expect = 3e-60
 Identities = 277/329 (84%)
 Strand = Plus / Plus

                                                                       
Query: 93  gatgaccgcatccgcagcttcgaggacttcgcgagggtgcaccagttcctgctgattgcg 152
           ||||| |||||||| |||| |||||| |||||||||||||||  || |||||||   || 
Sbjct: 122 gatgatcgcatccggagctacgaggatttcgcgagggtgcacgcgtacctgctggccgca 181

                                                                       
Query: 153 gccggcgtgccgtcgtcgctgcatcggcggctgtaccgcaagctcgccgacgaggtgttc 212
            ||||  | ||| |||||||||| | |||||| |||||||||||||||||||||||||||
Sbjct: 182 tccgggatcccgccgtcgctgcaccagcggctttaccgcaagctcgccgacgaggtgttc 241

                                                                       
Query: 213 gacggcggggagagcttctccgtcgagccctgcgaggaagggaggcagcgccgcctcgtg 272
           ||||||||||||  |||||| || ||||||||||||| ||||||||||||  | ||||| 
Sbjct: 242 gacggcggggaggccttctcggtagagccctgcgagggagggaggcagcggaggctcgtt 301

                                                                       
Query: 273 ctcgcctccggggcgcctcttgggagcgaggcggacgtcttcctcgtcgaccacgcgtgg 332
           |||||| | | |  | |||| ||||| ||| | || |||||||||||||||||||| |||
Sbjct: 302 ctcgccgctgagtggactctagggagggagtccgatgtcttcctcgtcgaccacgcctgg 361

                                                                       
Query: 333 tccttccgcctctccgatgcgctcaagcagctacgtgaagtaccaggattggccgagaga 392
           ||||||||||||||||||||||| |||||| |  | |||||||||||| |||| || |||
Sbjct: 362 tccttccgcctctccgatgcgcttaagcagttgagggaagtaccaggactggctgaaaga 421

                                        
Query: 393 atggcagctctaatgtgcgtggatctgga 421
           ||||||||  | ||||| |||||||||||
Sbjct: 422 atggcagcattgatgtgtgtggatctgga 450

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  210 bits (106), Expect = 3e-51
 Identities = 229/270 (84%)
 Strand = Plus / Plus

                                                                           
Query: 93      gatgaccgcatccgcagcttcgaggacttcgcgagggtgcaccagttcctgctgattgcg 152
               ||||| |||||||| |||| |||||| |||||||||||||||  || |||||||   || 
Sbjct: 4132545 gatgatcgcatccggagctacgaggatttcgcgagggtgcacgcgtacctgctggccgca 4132604

                                                                           
Query: 153     gccggcgtgccgtcgtcgctgcatcggcggctgtaccgcaagctcgccgacgaggtgttc 212
                ||||  | ||| |||||||||| | |||||| |||||||||||||||||||||||||||
Sbjct: 4132605 tccgggatcccgccgtcgctgcaccagcggctttaccgcaagctcgccgacgaggtgttc 4132664

                                                                           
Query: 213     gacggcggggagagcttctccgtcgagccctgcgaggaagggaggcagcgccgcctcgtg 272
               ||||||||||||  |||||| || ||||||||||||| ||||||||||||  | ||||| 
Sbjct: 4132665 gacggcggggaggccttctcggtagagccctgcgagggagggaggcagcggaggctcgtt 4132724

                                                                           
Query: 273     ctcgcctccggggcgcctcttgggagcgaggcggacgtcttcctcgtcgaccacgcgtgg 332
               |||||| | | |  | |||| ||||| ||| | || |||||||||||||||||||| |||
Sbjct: 4132725 ctcgccgctgagtggactctagggagggagtccgatgtcttcctcgtcgaccacgcctgg 4132784

                                             
Query: 333     tccttccgcctctccgatgcgctcaagcag 362
               ||||||||||||||||||||||| ||||||
Sbjct: 4132785 tccttccgcctctccgatgcgcttaagcag 4132814



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                    
Query: 369     gaagtaccaggattggccgagagaatggcagctctaatgtgcgtggatctgga 421
               |||||||||||| |||| || |||||||||||  | ||||| |||||||||||
Sbjct: 4133411 gaagtaccaggactggctgaaagaatggcagcattgatgtgtgtggatctgga 4133463

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  210 bits (106), Expect = 3e-51
 Identities = 229/270 (84%)
 Strand = Plus / Plus

                                                                           
Query: 93      gatgaccgcatccgcagcttcgaggacttcgcgagggtgcaccagttcctgctgattgcg 152
               ||||| |||||||| |||| |||||| |||||||||||||||  || |||||||   || 
Sbjct: 4132654 gatgatcgcatccggagctacgaggatttcgcgagggtgcacgcgtacctgctggccgca 4132713

                                                                           
Query: 153     gccggcgtgccgtcgtcgctgcatcggcggctgtaccgcaagctcgccgacgaggtgttc 212
                ||||  | ||| |||||||||| | |||||| |||||||||||||||||||||||||||
Sbjct: 4132714 tccgggatcccgccgtcgctgcaccagcggctttaccgcaagctcgccgacgaggtgttc 4132773

                                                                           
Query: 213     gacggcggggagagcttctccgtcgagccctgcgaggaagggaggcagcgccgcctcgtg 272
               ||||||||||||  |||||| || ||||||||||||| ||||||||||||  | ||||| 
Sbjct: 4132774 gacggcggggaggccttctcggtagagccctgcgagggagggaggcagcggaggctcgtt 4132833

                                                                           
Query: 273     ctcgcctccggggcgcctcttgggagcgaggcggacgtcttcctcgtcgaccacgcgtgg 332
               |||||| | | |  | |||| ||||| ||| | || |||||||||||||||||||| |||
Sbjct: 4132834 ctcgccgctgagtggactctagggagggagtccgatgtcttcctcgtcgaccacgcctgg 4132893

                                             
Query: 333     tccttccgcctctccgatgcgctcaagcag 362
               ||||||||||||||||||||||| ||||||
Sbjct: 4132894 tccttccgcctctccgatgcgcttaagcag 4132923



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                    
Query: 369     gaagtaccaggattggccgagagaatggcagctctaatgtgcgtggatctgga 421
               |||||||||||| |||| || |||||||||||  | ||||| |||||||||||
Sbjct: 4133520 gaagtaccaggactggctgaaagaatggcagcattgatgtgtgtggatctgga 4133572

>gb|AC125472.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0050H14, complete sequence
          Length = 142245

 Score =  210 bits (106), Expect = 3e-51
 Identities = 229/270 (84%)
 Strand = Plus / Plus

                                                                         
Query: 93    gatgaccgcatccgcagcttcgaggacttcgcgagggtgcaccagttcctgctgattgcg 152
             ||||| |||||||| |||| |||||| |||||||||||||||  || |||||||   || 
Sbjct: 33182 gatgatcgcatccggagctacgaggatttcgcgagggtgcacgcgtacctgctggccgca 33241

                                                                         
Query: 153   gccggcgtgccgtcgtcgctgcatcggcggctgtaccgcaagctcgccgacgaggtgttc 212
              ||||  | ||| |||||||||| | |||||| |||||||||||||||||||||||||||
Sbjct: 33242 tccgggatcccgccgtcgctgcaccagcggctttaccgcaagctcgccgacgaggtgttc 33301

                                                                         
Query: 213   gacggcggggagagcttctccgtcgagccctgcgaggaagggaggcagcgccgcctcgtg 272
             ||||||||||||  |||||| || ||||||||||||| ||||||||||||  | ||||| 
Sbjct: 33302 gacggcggggaggccttctcggtagagccctgcgagggagggaggcagcggaggctcgtt 33361

                                                                         
Query: 273   ctcgcctccggggcgcctcttgggagcgaggcggacgtcttcctcgtcgaccacgcgtgg 332
             |||||| | | |  | |||| ||||| ||| | || |||||||||||||||||||| |||
Sbjct: 33362 ctcgccgctgagtggactctagggagggagtccgatgtcttcctcgtcgaccacgcctgg 33421

                                           
Query: 333   tccttccgcctctccgatgcgctcaagcag 362
             ||||||||||||||||||||||| ||||||
Sbjct: 33422 tccttccgcctctccgatgcgcttaagcag 33451



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                  
Query: 369   gaagtaccaggattggccgagagaatggcagctctaatgtgcgtggatctgga 421
             |||||||||||| |||| || |||||||||||  | ||||| |||||||||||
Sbjct: 34048 gaagtaccaggactggctgaaagaatggcagcattgatgtgtgtggatctgga 34100

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 57/66 (86%)
 Strand = Plus / Plus

                                                                            
Query: 369      gaagtaccaggattggccgagagaatggcagctctaatgtgcgtggatctggataggaga 428
                |||||||||||| |||| || |||||||||||  | ||||| ||||||||||| ||||||
Sbjct: 21897130 gaagtaccaggactggctgaaagaatggcagcattgatgtgtgtggatctggacaggaga 21897189

                      
Query: 429      attgag 434
                | ||||
Sbjct: 21897190 actgag 21897195

>dbj|AP004558.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0409A07
          Length = 146663

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 57/66 (86%)
 Strand = Plus / Plus

                                                                         
Query: 369   gaagtaccaggattggccgagagaatggcagctctaatgtgcgtggatctggataggaga 428
             |||||||||||| |||| || |||||||||||  | ||||| ||||||||||| ||||||
Sbjct: 97799 gaagtaccaggactggctgaaagaatggcagcattgatgtgtgtggatctggacaggaga 97858

                   
Query: 429   attgag 434
             | ||||
Sbjct: 97859 actgag 97864

>gb|AF196488.2|AF196488 Mycobacterium smegmatis hypothetical protein, complete cds; and
            cydABDC gene cluster, complete sequence
          Length = 7506

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                    
Query: 181  ggctgtaccgcaagctcgccgacg 204
            ||||||||||||||||||||||||
Sbjct: 6109 ggctgtaccgcaagctcgccgacg 6132

>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome
          Length = 5928787

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 347     cgatgcgctcaagcagctacg 367
               |||||||||||||||||||||
Sbjct: 4157535 cgatgcgctcaagcagctacg 4157515

>gb|AF547430.1| Mycobacteriophage PG1, complete genome
          Length = 68999

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 195   ctcgccgacgaggtgttcgacggcg 219
             ||||||||||| |||||||||||||
Sbjct: 55222 ctcgccgacgacgtgttcgacggcg 55198

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 169     cgctgcatcggcggctgtacc 189
               |||||||||||||||||||||
Sbjct: 7369076 cgctgcatcggcggctgtacc 7369056



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 261     cgccgcctcgtgctcgcctc 280
               ||||||||||||||||||||
Sbjct: 4148803 cgccgcctcgtgctcgcctc 4148822



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 151     cggccggcgtgccgtcgtcgctgc 174
               ||||||||| ||||||||||||||
Sbjct: 1596846 cggccggcgcgccgtcgtcgctgc 1596869

>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 186     taccgcaagctcgccgacgag 206
               |||||||||||||||||||||
Sbjct: 2381467 taccgcaagctcgccgacgag 2381487



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 187     accgcaagctcgccgacgagg 207
               |||||||||||||||||||||
Sbjct: 1658626 accgcaagctcgccgacgagg 1658646

>gb|AE005082.1| Halobacterium sp. NRC-1 section 113 of 170 of the complete genome
          Length = 10383

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 150  gcggccggcgtgccgtcgtcg 170
            |||||||||||||||||||||
Sbjct: 1324 gcggccggcgtgccgtcgtcg 1344

>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 187     accgcaagctcgccgacgag 206
               ||||||||||||||||||||
Sbjct: 2255580 accgcaagctcgccgacgag 2255599



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 141     ctgctgattgcggccggcgtgccg 164
               ||||||| ||||||||||||||||
Sbjct: 1128618 ctgctgagtgcggccggcgtgccg 1128641

>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence
          Length = 2580084

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 137    gttcctgctgattgcggccggcgt 160
              |||| |||||||||||||||||||
Sbjct: 271345 gttcttgctgattgcggccggcgt 271322

>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 151     cggccggcgtgccgtcgtcg 170
               ||||||||||||||||||||
Sbjct: 4835127 cggccggcgtgccgtcgtcg 4835108

>emb|BX842578.1| Mycobacterium tuberculosis H37Rv complete genome; segment 7/13
          Length = 346186

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 187    accgcaagctcgccgacgag 206
              ||||||||||||||||||||
Sbjct: 179544 accgcaagctcgccgacgag 179563

>emb|BX842575.1| Mycobacterium tuberculosis H37Rv complete genome; segment 4/13
          Length = 349306

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 141   ctgctgattgcggccggcgtgccg 164
             ||||||| ||||||||||||||||
Sbjct: 94787 ctgctgagtgcggccggcgtgccg 94810

>emb|BX248341.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment
             8/14
          Length = 306050

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 187   accgcaagctcgccgacgag 206
             ||||||||||||||||||||
Sbjct: 32163 accgcaagctcgccgacgag 32182

>emb|BX248337.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 4/14
          Length = 327650

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 141    ctgctgattgcggccggcgtgccg 164
              ||||||| ||||||||||||||||
Sbjct: 142025 ctgctgagtgcggccggcgtgccg 142048

>emb|AL939111.1|SCO939111 Streptomyces coelicolor A3(2) complete genome; segment 8/29
          Length = 321250

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 182   gctgtaccgcaagctcgccg 201
             ||||||||||||||||||||
Sbjct: 91622 gctgtaccgcaagctcgccg 91603

>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 161     gccgtcgtcgctgcatcggc 180
               ||||||||||||||||||||
Sbjct: 4206487 gccgtcgtcgctgcatcggc 4206468

>ref|NM_208319.1| Eremothecium gossypii ABR020Wp (ABR020W), mRNA
          Length = 936

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 258 cagcgccgcctcgtgctcgc 277
           ||||||||||||||||||||
Sbjct: 114 cagcgccgcctcgtgctcgc 95

>dbj|AP006361.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT46P17, TM0137,
             complete sequence
          Length = 102271

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                         
Query: 306   gacgtcttcctcgtcgaccacgcgtggtccttccgcctctccga 349
             |||||||||||| |||| ||||| ||| ||||||| ||| ||||
Sbjct: 35906 gacgtcttcctcatcgatcacgcatggaccttccgactccccga 35949

>gb|AE016815.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome II,
              complete sequence
          Length = 867699

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 258    cagcgccgcctcgtgctcgc 277
              ||||||||||||||||||||
Sbjct: 429810 cagcgccgcctcgtgctcgc 429791


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,190,599
Number of Sequences: 3902068
Number of extensions: 2190599
Number of successful extensions: 47189
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 46310
Number of HSP's gapped (non-prelim): 874
length of query: 441
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 419
effective length of database: 17,147,199,772
effective search space: 7184676704468
effective search space used: 7184676704468
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)