ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl12d08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MAST1_HUMAN (Q9Y2H9) Microtubule-associated serine/threonine-pro... 30 3.0
2C71A1_PERAE (P24465) Cytochrome P450 71A1 (EC 1.14.-.-) (CYPLXXI... 28 6.7
3ABCB9_HUMAN (Q9NP78) ATP-binding cassette sub-family B member 9 ... 28 8.8
4NEST_HUMAN (P48681) Nestin 28 8.8
5GP124_MOUSE (Q91ZV8) Probable G-protein coupled receptor 124 pre... 28 8.8
6E75BB_DROME (P13055) Ecdysone-induced protein 75B isoform B (E75-C) 28 8.8

>MAST1_HUMAN (Q9Y2H9) Microtubule-associated serine/threonine-protein kinase 1 (EC|
            2.7.11.1) (Syntrophin-associated serine/threonine-protein
            kinase)
          Length = 1570

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = -2

Query: 368  EQVRPGAKAACP-PLASSRQYVPAPIPEIRKLPEASR 261
            E  RPGAKA  P PL +  + +  P P    +PEA R
Sbjct: 1439 EPARPGAKAVVPQPLGADSKGLQEPAPLAPSVPEAPR 1475



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>C71A1_PERAE (P24465) Cytochrome P450 71A1 (EC 1.14.-.-) (CYPLXXIA1) (ARP-2)|
          Length = 471

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 17/39 (43%), Positives = 20/39 (51%)
 Frame = +3

Query: 171 KKPPNLPPQIRWSQPNLITPSRLHRRIQVSPRRLRKLTN 287
           +K PNLPP    S PNL     LH+   +  R LR L N
Sbjct: 26  EKKPNLPP----SPPNLPIIGNLHQLGNLPHRSLRSLAN 60



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>ABCB9_HUMAN (Q9NP78) ATP-binding cassette sub-family B member 9 precursor|
           (ATP-binding cassette transporter 9) (ABC transporter 9
           protein) (TAP-like protein) (TAPL) (hABCB9)
          Length = 766

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 3/35 (8%)
 Frame = -2

Query: 383 VWWLREQVRPGAKAACPPLASSRQYVPA---PIPE 288
           +WWL   VRPG +A  P  A+  +  P    P PE
Sbjct: 133 LWWLLSTVRPGTQALEPGAATEAEGFPGSGRPPPE 167



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>NEST_HUMAN (P48681) Nestin|
          Length = 1618

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 14/61 (22%)
 Frame = -2

Query: 368 EQVRPGAKAACPPLASSRQYVPAPIPEI----RKLPEASR----------*HLDAAVEST 231
           E+V   A+AAC P   +    PAP PE+    R+L EA R           H++ +++ T
Sbjct: 147 ERVGLNAQAACAPRLPAPPRPPAPAPEVEELARRLGEAWRGAVRGYQERVAHMETSLDQT 206

Query: 230 R 228
           R
Sbjct: 207 R 207



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>GP124_MOUSE (Q91ZV8) Probable G-protein coupled receptor 124 precursor (Tumor|
            endothelial marker 5)
          Length = 1329

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = -2

Query: 371  REQVRPGAKAACPPLASSRQYVPAPIPEIRKLPEAS 264
            R  VR   +A CPP + S  +VPA     R LP A+
Sbjct: 1063 RRDVRASWRACCPPASPSASHVPA-----RALPTAT 1093



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>E75BB_DROME (P13055) Ecdysone-induced protein 75B isoform B (E75-C)|
          Length = 1412

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = +1

Query: 130 DEFTTTISFRTTSPRNPPTYHR-RSAGASPI*SRRVDSTA 246
           DE T  ++ R  S   PP +H  RSA  SP+ +RR  + A
Sbjct: 214 DEATVVVAARRHSVSPPPLHHHSRSAPVSPVIARRGGAAA 253


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,779,211
Number of Sequences: 219361
Number of extensions: 763448
Number of successful extensions: 2858
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2708
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2855
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2286875994
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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