>gb|AC121594.3| Mus musculus BAC clone RP23-297A16 from chromosome 8, complete
            sequence
          Length = 209451

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 196  agatccgctggagccagcccaatct 220
            |||||| ||||||||||||||||||
Sbjct: 7836 agatcctctggagccagcccaatct 7812

>gb|AC102212.4| Mus musculus chromosome 8, clone RP24-374D15, complete sequence
          Length = 137171

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 196    agatccgctggagccagcccaatct 220
              |||||| ||||||||||||||||||
Sbjct: 114365 agatcctctggagccagcccaatct 114341

>gb|BT025393.1| Bos taurus family with sequence similarity 73, member B (FAM73B),
           mRNA, complete cds
          Length = 3560

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 130 gatgagttcaccaccaccat 149
           ||||||||||||||||||||
Sbjct: 609 gatgagttcaccaccaccat 590

>ref|XM_879976.1| PREDICTED: Bos taurus similar to CG12125-PA, transcript variant 4
           (LOC535315), mRNA
          Length = 3580

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 130 gatgagttcaccaccaccat 149
           ||||||||||||||||||||
Sbjct: 628 gatgagttcaccaccaccat 609

>ref|XM_867289.1| PREDICTED: Bos taurus similar to CG12125-PA, transcript variant 2
           (LOC535315), mRNA
          Length = 3583

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 130 gatgagttcaccaccaccat 149
           ||||||||||||||||||||
Sbjct: 628 gatgagttcaccaccaccat 609

>gb|AF503818.1| Uncultured bacterium clone M214 NasA (nasA) gene, partial cds
          Length = 800

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 110 ccaccaccagaggacaagcc 129
           ||||||||||||||||||||
Sbjct: 277 ccaccaccagaggacaagcc 258

>gb|AC159021.2| Pan troglodytes BAC clone CH251-508C8 from chromosome unknown, complete
             sequence
          Length = 240827

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 136   ttcaccaccaccatttcctt 155
             ||||||||||||||||||||
Sbjct: 83188 ttcaccaccaccatttcctt 83169

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 237     ctccaccgccgcatccaggt 256
               ||||||||||||||||||||
Sbjct: 2232585 ctccaccgccgcatccaggt 2232566

>gb|AC172304.2| Gallus gallus BAC clone CH261-75C12 from chromosome ul, complete sequence
          Length = 227366

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 43     ttctccttcccagcgcccgc 62
              ||||||||||||||||||||
Sbjct: 179021 ttctccttcccagcgcccgc 179002

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 58      cccgccgccgttcacggcgc 77
               ||||||||||||||||||||
Sbjct: 1060013 cccgccgccgttcacggcgc 1059994

>dbj|AP000399.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
             clone:P0535G04
          Length = 154180

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 237   ctccaccgccgcatccaggt 256
             ||||||||||||||||||||
Sbjct: 92042 ctccaccgccgcatccaggt 92023

>gb|AC102249.16| Mus musculus chromosome 19, clone RP24-160D21, complete sequence
          Length = 212190

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 130   gatgagttcaccaccaccat 149
             ||||||||||||||||||||
Sbjct: 98272 gatgagttcaccaccaccat 98253


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,394,144
Number of Sequences: 3902068
Number of extensions: 3394144
Number of successful extensions: 58322
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 58198
Number of HSP's gapped (non-prelim): 124
length of query: 420
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 398
effective length of database: 17,147,199,772
effective search space: 6824585509256
effective search space used: 6824585509256
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)