ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl12d05 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF033096.1|AF033096 Avena sativa nonphototropic hypocotyl 1 (NPH1-1) mRNA, complete cds Length = 3467 Score = 149 bits (75), Expect = 8e-33 Identities = 103/111 (92%), Gaps = 6/111 (5%) Strand = Plus / Plus Query: 158 atggcttccaaaggtgcagaaggcggcggcggc---catgaggagcctcctcagcggccg 214 ||||||||||||||||||| ||||||||||||| ||||||||||||| |||||||| Sbjct: 404 atggcttccaaaggtgcaggaggcggcggcggcggccatgaggagcctc---agcggccg 460 Query: 215 aagcagcagctgccgcgcgactcccgtggctcgctcgaggtcttcaacccc 265 |||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 461 aagcagcagctgccgcgcgactcccgcggctcgctcgaggtcttcaacccc 511 Score = 56.0 bits (28), Expect = 9e-05 Identities = 40/44 (90%) Strand = Plus / Plus Query: 343 catcgaggatgtggacagggcgacgcagcgggcggcggagtggg 386 |||||||||||| | || ||| |||||||||||||||||||||| Sbjct: 601 catcgaggatgtcggcaaggccacgcagcgggcggcggagtggg 644
>gb|AF033097.1|AF033097 Avena sativa nonphototropic hypocotyl 1 (NPH1-2) mRNA, complete cds Length = 3422 Score = 117 bits (59), Expect = 3e-23 Identities = 62/63 (98%) Strand = Plus / Plus Query: 203 cctcagcggccgaagcagcagctgccgcgcgactcccgtggctcgctcgaggtcttcaac 262 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 392 cctcagcggccgaagcagcagctgccgcgcgactcccgcggctcgctcgaggtcttcaac 451 Query: 263 ccc 265 ||| Sbjct: 452 ccc 454 Score = 48.1 bits (24), Expect = 0.021 Identities = 39/44 (88%) Strand = Plus / Plus Query: 343 catcgaggatgtggacagggcgacgcagcgggcggcggagtggg 386 |||||||||||| | || ||| ||||||||||| |||||||||| Sbjct: 538 catcgaggatgtcggcaaggccacgcagcgggcagcggagtggg 581
>gb|AC116146.14| Mus musculus chromosome 7, clone RP24-168I21, complete sequence Length = 130931 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Minus Query: 100 gaggaagaagaggagggaaggaggag 125 |||||||||||||||||||||||||| Sbjct: 48931 gaggaagaagaggagggaaggaggag 48906
>gb|AC104868.8| Mus musculus chromosome 1, clone RP24-532K6, complete sequence Length = 182376 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Minus Query: 100 gaggaagaagaggagggaaggagga 124 ||||||||||||||||||||||||| Sbjct: 56574 gaggaagaagaggagggaaggagga 56550 Score = 44.1 bits (22), Expect = 0.33 Identities = 25/26 (96%) Strand = Plus / Minus Query: 100 gaggaagaagaggagggaaggaggag 125 |||||||||||| ||||||||||||| Sbjct: 56703 gaggaagaagagaagggaaggaggag 56678
>emb|AL359532.26| Human DNA sequence from clone RP11-330O11 on chromosome 10 Contains the 3' end of the gene for a novel protein (LOC220929) (FLJ32761), a DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 10 (RNA helicase) (DDH10) pseudogene and a CpG island, complete sequence Length = 179798 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Plus Query: 100 gaggaagaagaggagggaaggagga 124 ||||||||||||||||||||||||| Sbjct: 11415 gaggaagaagaggagggaaggagga 11439
>gb|DQ286293.1| Rattus norvegicus HS1 binding protein gene, complete cds Length = 3686 Score = 46.1 bits (23), Expect = 0.084 Identities = 23/23 (100%) Strand = Plus / Minus Query: 20 taaataaataaaatatgaggaga 42 ||||||||||||||||||||||| Sbjct: 1927 taaataaataaaatatgaggaga 1905
>gb|AC184800.2| Pan troglodytes chromosome X clone PTB-18K16 map human ortholog p11.23, complete sequence Length = 142154 Score = 44.1 bits (22), Expect = 0.33 Identities = 25/26 (96%) Strand = Plus / Minus Query: 100 gaggaagaagaggagggaaggaggag 125 |||||||||||||| ||||||||||| Sbjct: 25619 gaggaagaagaggaaggaaggaggag 25594
>gb|AC165370.4| Mus musculus BAC clone RP23-2N3 from chromosome 10, complete sequence Length = 219653 Score = 44.1 bits (22), Expect = 0.33 Identities = 25/26 (96%) Strand = Plus / Plus Query: 100 gaggaagaagaggagggaaggaggag 125 |||||||||||||| ||||||||||| Sbjct: 11261 gaggaagaagaggaaggaaggaggag 11286
>gb|AC165279.3| Mus musculus chromosome 15, clone RP23-259J10, complete sequence Length = 176055 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Plus Query: 100 gaggaagaagaggagggaagga 121 |||||||||||||||||||||| Sbjct: 58908 gaggaagaagaggagggaagga 58929
>gb|AC124171.3| Mus musculus BAC clone RP23-167E23 from chromosome 13, complete sequence Length = 198242 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 104 aagaagaggagggaaggaggag 125 |||||||||||||||||||||| Sbjct: 178152 aagaagaggagggaaggaggag 178131
>gb|AC124465.6| Mus musculus BAC clone RP24-156M16 from chromosome 13, complete sequence Length = 169973 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Plus Query: 104 aagaagaggagggaaggaggag 125 |||||||||||||||||||||| Sbjct: 126127 aagaagaggagggaaggaggag 126148
>gb|AC116180.4| Mus musculus BAC clone RP24-167M11 from chromosome 9, complete sequence Length = 149442 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 103 gaagaagaggagggaaggagga 124 |||||||||||||||||||||| Sbjct: 5856 gaagaagaggagggaaggagga 5835
>gb|AC010091.2| Homo sapiens BAC clone RP11-295A1 from 7, complete sequence Length = 56864 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Plus Query: 100 gaggaagaagaggagggaagga 121 |||||||||||||||||||||| Sbjct: 6929 gaggaagaagaggagggaagga 6950
>gb|AC161195.4| Mus musculus chromosome 15, clone RP23-313M10, complete sequence Length = 166637 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Plus Query: 25 aaataaaatatgaggagatgaa 46 |||||||||||||||||||||| Sbjct: 33650 aaataaaatatgaggagatgaa 33671
>emb|AL009172.1|HS212G6 Human DNA sequence from clone RP1-212G6 on chromosome Xp11.3-11.4 Contains the 5'end of the SYN1 gene for synapsin I, the PFC gene for properdin P factor (complement), the ELK1 member of the ETS oncogene family, the UTX gene for ubiquitously-expressed transcript, an SMS (spermine synthase) pseudogene, a novel gene (LOC286403) and three CpG islands, complete sequence Length = 156601 Score = 44.1 bits (22), Expect = 0.33 Identities = 25/26 (96%) Strand = Plus / Minus Query: 100 gaggaagaagaggagggaaggaggag 125 |||||||||||||| ||||||||||| Sbjct: 78906 gaggaagaagaggaaggaaggaggag 78881
>gb|AC141480.4| Mus musculus BAC clone RP23-210I6 from chromosome 3, complete sequence Length = 209458 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 100 gaggaagaagaggagggaagga 121 |||||||||||||||||||||| Sbjct: 128854 gaggaagaagaggagggaagga 128833
>gb|AC164291.2| Mus musculus BAC clone RP24-85F23 from chromosome 16, complete sequence Length = 237479 Score = 44.1 bits (22), Expect = 0.33 Identities = 25/26 (96%) Strand = Plus / Minus Query: 100 gaggaagaagaggagggaaggaggag 125 ||||||||||||| |||||||||||| Sbjct: 181551 gaggaagaagaggggggaaggaggag 181526
>gb|AC164631.5| Mus musculus 6 BAC RP23-359M3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 237469 Score = 44.1 bits (22), Expect = 0.33 Identities = 29/30 (96%), Gaps = 1/30 (3%) Strand = Plus / Plus Query: 100 gaggaagaagaggagg-gaaggaggagtgc 128 |||||||||||||||| ||||||||||||| Sbjct: 118864 gaggaagaagaggaggagaaggaggagtgc 118893
>emb|AL592522.12| Mouse DNA sequence from clone RP23-210M6 on chromosome 11 Contains the genes for two novel 7 transmembrane receptor (rhodopsin family) domain-containing proteins, a high mobility group box 1 (Hmgb1) pseudogene, the Cias1 gene for cold autoinflammatory syndrome 1 homolog (human), a novel gene (4933439C10Rik), the gene for a novel protein (D130067D09), a ribosomal protein L18 (Rpl18) pseudogene, an ariadne homolog 2 (Drosophila) (Arih2) pseudogene, the gene for a novel zinc finger domain-containing protein, the 3' end of the gene for a novel protein and one CpG island, complete sequence Length = 157300 Score = 44.1 bits (22), Expect = 0.33 Identities = 25/26 (96%) Strand = Plus / Plus Query: 100 gaggaagaagaggagggaaggaggag 125 ||||||||||||||||||| |||||| Sbjct: 33512 gaggaagaagaggagggaaagaggag 33537
>emb|AL845255.2| Mouse DNA sequence from clone RP23-298K19 on chromosome 4 Contains a K+ channel tetramerisation domain protein pseudogene and a novel gene, complete sequence Length = 199040 Score = 44.1 bits (22), Expect = 0.33 Identities = 25/26 (96%) Strand = Plus / Plus Query: 100 gaggaagaagaggagggaaggaggag 125 ||||| |||||||||||||||||||| Sbjct: 10722 gaggaggaagaggagggaaggaggag 10747
>gb|AE014181.1| Mus musculus piebald deletion region section 9 of 11 of the complete sequence Length = 400029 Score = 44.1 bits (22), Expect = 0.33 Identities = 25/26 (96%) Strand = Plus / Minus Query: 100 gaggaagaagaggagggaaggaggag 125 |||||||||||||| ||||||||||| Sbjct: 41383 gaggaagaagaggaaggaaggaggag 41358
>gb|AC159292.3| Mus musculus BAC clone RP23-290D9 from chromosome 10, complete sequence Length = 224627 Score = 44.1 bits (22), Expect = 0.33 Identities = 25/26 (96%) Strand = Plus / Plus Query: 100 gaggaagaagaggagggaaggaggag 125 |||||||||||||| ||||||||||| Sbjct: 188686 gaggaagaagaggaaggaaggaggag 188711
>gb|AC118008.14| Mus musculus chromosome 15, clone RP23-435B2, complete sequence Length = 204342 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Plus Query: 25 aaataaaatatgaggagatgaa 46 |||||||||||||||||||||| Sbjct: 120953 aaataaaatatgaggagatgaa 120974
>emb|CT009762.8| Mouse DNA sequence from clone RP23-211O9 on chromosome 13, complete sequence Length = 229171 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Plus Query: 103 gaagaagaggagggaaggagga 124 |||||||||||||||||||||| Sbjct: 173968 gaagaagaggagggaaggagga 173989
>gb|AC146299.5| Mus musculus BAC clone RP23-72A20 from 9, complete sequence Length = 166132 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 103 gaagaagaggagggaaggagga 124 |||||||||||||||||||||| Sbjct: 148872 gaagaagaggagggaaggagga 148851
>gb|AC159290.2| Mus musculus BAC clone RP23-291I2 from chromosome 13, complete sequence Length = 231853 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 105 agaagaggagggaaggaggag 125 ||||||||||||||||||||| Sbjct: 209205 agaagaggagggaaggaggag 209225
>ref|XM_479630.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3312 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 100 gaggaagaagaggagggaagg 120 ||||||||||||||||||||| Sbjct: 77 gaggaagaagaggagggaagg 57
>gb|AC158302.3| Mus musculus chromosome 5, clone RP24-61O18, complete sequence Length = 215326 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 100 gaggaagaagaggagggaaggagga 124 |||||| |||||||||||||||||| Sbjct: 131091 gaggaaaaagaggagggaaggagga 131067 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 gaagaagaggagggaaggag 122 |||||||||||||||||||| Sbjct: 168610 gaagaagaggagggaaggag 168591
>gb|AC074225.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-78M3, complete sequence Length = 197412 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 tgaggagatgaagagctgagg 55 ||||||||||||||||||||| Sbjct: 137078 tgaggagatgaagagctgagg 137058
>gb|AC124426.4| Mus musculus BAC clone RP24-231B8 from chromosome 13, complete sequence Length = 199585 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 105 agaagaggagggaaggaggag 125 ||||||||||||||||||||| Sbjct: 25481 agaagaggagggaaggaggag 25501
>gb|AC121950.2| Mus musculus BAC clone RP24-216M19 from 6, complete sequence Length = 170988 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 100 gaggaagaagaggagggaagg 120 ||||||||||||||||||||| Sbjct: 162555 gaggaagaagaggagggaagg 162575
>gb|AC164289.3| Mus musculus BAC clone RP23-380L19 from chromosome 6, complete sequence Length = 212908 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 35 tgaggagatgaagagctgagg 55 ||||||||||||||||||||| Sbjct: 129769 tgaggagatgaagagctgagg 129789
>emb|AJ009972.1|ANI9972 Aspergillus niger pyc gene Length = 6513 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 101 aggaagaagaggagggaaggaggag 125 |||||||||||| |||||||||||| Sbjct: 1448 aggaagaagaggggggaaggaggag 1424
>gb|AC154393.8| Mus musculus chromosome 1, clone RP23-64O1, complete sequence Length = 253733 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 29 aaaatatgaggagatgaagag 49 ||||||||||||||||||||| Sbjct: 50254 aaaatatgaggagatgaagag 50234
>gb|AC019026.12| Mus musculus chromosome 6 clone RP23-188E5 strain C57BL6/J, complete sequence Length = 157996 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 100 gaggaagaagaggagggaagg 120 ||||||||||||||||||||| Sbjct: 86342 gaggaagaagaggagggaagg 86362
>gb|AC095055.3| Homo sapiens BAC clone RP11-372K14 from 4, complete sequence Length = 183478 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 20 taaataaataaaatatgagga 40 ||||||||||||||||||||| Sbjct: 10437 taaataaataaaatatgagga 10457
>gb|AC156033.6| Mus musculus BAC clone RP23-377G8 from chromosome 12, complete sequence Length = 216718 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 101 aggaagaagaggagggaaggaggag 125 ||||||||||||| ||||||||||| Sbjct: 172269 aggaagaagaggaaggaaggaggag 172293
>gb|AC135355.3| Mus musculus BAC clone RP24-495F22 from chromosome 6, complete sequence Length = 171057 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 100 gaggaagaagaggagggaaggagga 124 ||||||||||||||||| ||||||| Sbjct: 44654 gaggaagaagaggaggggaggagga 44630
>dbj|AK037681.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A130036O06 product:unclassifiable, full insert sequence Length = 2376 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 100 gaggaagaagaggagggaaggagga 124 ||||||||||||||||| ||||||| Sbjct: 255 gaggaagaagaggaggggaggagga 231
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 100 gaggaagaagaggagggaagg 120 ||||||||||||||||||||| Sbjct: 29563202 gaggaagaagaggagggaagg 29563182
>gb|AC093772.2| Homo sapiens BAC clone RP11-125O18 from 4, complete sequence Length = 175490 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 101 aggaagaagaggagggaagga 121 ||||||||||||||||||||| Sbjct: 65492 aggaagaagaggagggaagga 65512
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 171 gtgcagaaggcggcggcggcc 191 ||||||||||||||||||||| Sbjct: 960174 gtgcagaaggcggcggcggcc 960154
>dbj|AP005199.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0627E10 Length = 163388 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 100 gaggaagaagaggagggaagg 120 ||||||||||||||||||||| Sbjct: 89874 gaggaagaagaggagggaagg 89854
>gb|AC157091.6| Mus musculus 6 BAC RP24-359O2 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 206538 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 100 gaggaagaagaggagggaagg 120 ||||||||||||||||||||| Sbjct: 94545 gaggaagaagaggagggaagg 94565
>ref|XM_551104.1| Anopheles gambiae str. PEST ENSANGP00000029378 (ENSANGG00000006419), partial mRNA Length = 7155 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 171 gtgcagaaggcggcggcggcc 191 ||||||||||||||||||||| Sbjct: 2653 gtgcagaaggcggcggcggcc 2673
>ref|XM_321391.2| Anopheles gambiae str. PEST ENSANGP00000008519 (ENSANGG00000006419), partial mRNA Length = 7710 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 171 gtgcagaaggcggcggcggcc 191 ||||||||||||||||||||| Sbjct: 3208 gtgcagaaggcggcggcggcc 3228
>dbj|AK066112.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013051N02, full insert sequence Length = 3312 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 100 gaggaagaagaggagggaagg 120 ||||||||||||||||||||| Sbjct: 77 gaggaagaagaggagggaagg 57
>emb|CT030172.10| Mouse DNA sequence from clone RP23-313L22 on chromosome 13, complete sequence Length = 228833 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 105 agaagaggagggaaggaggag 125 ||||||||||||||||||||| Sbjct: 52639 agaagaggagggaaggaggag 52619
>emb|CT485608.3| Mouse DNA sequence from clone RP23-427F9 on chromosome 14, complete sequence Length = 182099 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 102 ggaagaagaggagggaaggag 122 ||||||||||||||||||||| Sbjct: 138020 ggaagaagaggagggaaggag 138000
>gb|AC144778.3| Mus musculus BAC clone RP23-278A22 from 6, complete sequence Length = 187115 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 100 gaggaagaagaggagggaaggagga 124 ||||||||||||||||| ||||||| Sbjct: 147414 gaggaagaagaggaggggaggagga 147390
>gb|AC127288.4| Mus musculus BAC clone RP23-358J11 from 8, complete sequence Length = 210710 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 100 gaggaagaagaggagggaaggagga 124 ||||| ||||||||||||||||||| Sbjct: 103828 gaggaggaagaggagggaaggagga 103804
>gb|AC138358.12| Mus musculus chromosome 1, clone RP24-147G10, complete sequence Length = 180227 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 aggaagaagaggagggaagg 120 |||||||||||||||||||| Sbjct: 58577 aggaagaagaggagggaagg 58596
>gb|AC154786.2| Mus musculus BAC clone RP24-468B14 from chromosome 16, complete sequence Length = 148053 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 101 aggaagaagaggagggaaggagga 124 |||| ||||||||||||||||||| Sbjct: 146158 aggaggaagaggagggaaggagga 146181
>gb|AC139064.13| Mus musculus chromosome 1, clone RP23-76C20, complete sequence Length = 242463 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 104 aagaagaggagggaaggagg 123 |||||||||||||||||||| Sbjct: 137716 aagaagaggagggaaggagg 137735
>gb|AC123618.26| Mus musculus chromosome 12, clone RP23-38N23, complete sequence Length = 201596 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 18 agtaaataaataaaatatgaggag 41 ||||||||||||||| |||||||| Sbjct: 120701 agtaaataaataaaaaatgaggag 120724
>ref|XM_598917.2| PREDICTED: Bos taurus similar to family with sequence similarity 62 (C2 domain containing), member A (LOC520669), mRNA Length = 4276 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 cagcagctgccgcgcgactc 237 |||||||||||||||||||| Sbjct: 339 cagcagctgccgcgcgactc 320
>gb|AC110250.16| Mus musculus chromosome 1, clone RP23-260K6, complete sequence Length = 219359 Score = 40.1 bits (20), Expect = 5.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 15 cccagtaaataaataaaatatgaggaga 42 |||||||||||||||| | ||||||||| Sbjct: 212471 cccagtaaataaataacacatgaggaga 212444
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 aagaagaggagggaaggagg 123 |||||||||||||||||||| Sbjct: 9382431 aagaagaggagggaaggagg 9382412
>gb|AC164316.3| Mus musculus BAC clone RP23-16B4 from chromosome 6, complete sequence Length = 222892 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 100 gaggaagaagaggagggaaggagg 123 ||||||||| |||||||||||||| Sbjct: 105916 gaggaagaaaaggagggaaggagg 105893
>gb|AC165081.3| Mus musculus BAC clone RP24-63B10 from chromosome 7, complete sequence Length = 182457 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 100 gaggaagaagaggagggaaggagg 123 ||||||||| |||||||||||||| Sbjct: 56763 gaggaagaaaaggagggaaggagg 56740
>ref|XM_979045.1| PREDICTED: Mus musculus cDNA sequence BC030863 (BC030863), mRNA Length = 6890 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 gagcccgaggaagaagagga 113 |||||||||||||||||||| Sbjct: 556 gagcccgaggaagaagagga 575
>ref|XM_001002785.1| PREDICTED: Mus musculus cDNA sequence BC030863 (BC030863), mRNA Length = 6891 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 gagcccgaggaagaagagga 113 |||||||||||||||||||| Sbjct: 556 gagcccgaggaagaagagga 575
>gb|AC023818.5| Homo sapiens chromosome 16 clone CTD-2600H12, complete sequence Length = 173304 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 gcggcggcggccatgaggag 199 |||||||||||||||||||| Sbjct: 44101 gcggcggcggccatgaggag 44082
>emb|AL773599.11| Mouse DNA sequence from clone RP23-326I8 on chromosome 4, complete sequence Length = 46151 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 101 aggaagaagaggagggaaggagga 124 |||||||||||||||| ||||||| Sbjct: 37426 aggaagaagaggaggggaggagga 37449
>gb|AC132095.3| Mus musculus BAC clone RP24-381M10 from chromosome 17, complete sequence Length = 187926 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 106 gaagaggagggaaggaggag 125 |||||||||||||||||||| Sbjct: 35025 gaagaggagggaaggaggag 35006
>gb|AC132229.3| Mus musculus BAC clone RP24-484C7 from chromosome 5, complete sequence Length = 170292 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 gaagaagaggagggaaggag 122 |||||||||||||||||||| Sbjct: 134682 gaagaagaggagggaaggag 134701
>gb|AC125484.4| Mus musculus BAC clone RP23-127L14 from chromosome 13, complete sequence Length = 207318 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 aagaagaggagggaaggagg 123 |||||||||||||||||||| Sbjct: 83067 aagaagaggagggaaggagg 83048
>gb|AC131080.13| Mus musculus chromosome 16, clone RP23-438H16, complete sequence Length = 192584 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 101 aggaagaagaggagggaaggagga 124 |||| ||||||||||||||||||| Sbjct: 16769 aggaggaagaggagggaaggagga 16792
>gb|AC018738.4| Homo sapiens BAC clone RP11-419H23 from 2, complete sequence Length = 178530 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 100 gaggaagaagaggagggaaggagg 123 |||||||||||||| ||||||||| Sbjct: 147688 gaggaagaagaggatggaaggagg 147711
>emb|BX927185.15| Zebrafish DNA sequence from clone CH211-198G1 in linkage group 8, complete sequence Length = 123568 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 cccagtaaataaataaaata 34 |||||||||||||||||||| Sbjct: 83122 cccagtaaataaataaaata 83141
>emb|CR847806.15| Zebrafish DNA sequence from clone CH211-267J10 in linkage group 8, complete sequence Length = 151455 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 cccagtaaataaataaaata 34 |||||||||||||||||||| Sbjct: 128973 cccagtaaataaataaaata 128992
>gb|AC121864.1| Mus musculus BAC clone RP24-111L8 from 17, complete sequence Length = 194372 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 106 gaagaggagggaaggaggag 125 |||||||||||||||||||| Sbjct: 179274 gaagaggagggaaggaggag 179255
>gb|AC112680.12| Mus musculus chromosome 9, clone RP23-203D1, complete sequence Length = 226883 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 101 aggaagaagaggagggaaggagga 124 |||||||||||||||| ||||||| Sbjct: 47381 aggaagaagaggaggggaggagga 47358
>gb|AC123714.6| Mus musculus chromosome 9, clone RP23-393E20, complete sequence Length = 217860 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 100 gaggaagaagaggagggaaggagg 123 |||||||||||||||||| ||||| Sbjct: 96494 gaggaagaagaggagggagggagg 96517
>gb|AC006945.17| Mus musculus strain 129/Sv clone ct7-453l13 map 6, complete sequence Length = 120311 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 gagcccgaggaagaagagga 113 |||||||||||||||||||| Sbjct: 80532 gagcccgaggaagaagagga 80513
>gb|AC133425.3| Rattus norvegicus 7 BAC CH230-333I12 (Children's Hospital Oakland Research Institute) complete sequence Length = 64809 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 gaggaagaagaggagggaag 119 |||||||||||||||||||| Sbjct: 36688 gaggaagaagaggagggaag 36707
>emb|AL772392.4| Human DNA sequence from clone RP11-450P7 on chromosome X Contains the 3' end of the CNK2 gene for connector enhancer of KSR2 (KIAA0902), gene FLJ34960, 3' end of the SMPX gene for X-linked small muscle protein and a CpG island, complete sequence Length = 124186 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 gagcccgaggaagaagagga 113 |||||||||||||||||||| Sbjct: 51107 gagcccgaggaagaagagga 51088
>emb|AL390723.21| Human DNA sequence from clone RP11-19G1 on chromosome 9 Contains part of a variant of the PTPRD gene for protein tyrosine phosphatase, receptor type, D (HPTP, PTPD, HPTPD), complete sequence Length = 94643 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 agaggagggaaggaggagtg 127 |||||||||||||||||||| Sbjct: 94333 agaggagggaaggaggagtg 94352
>gb|AC091542.3| Felis catus clone RP86-141L11, complete sequence Length = 142451 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 gcccgaggaagaagaggagg 115 |||||||||||||||||||| Sbjct: 50347 gcccgaggaagaagaggagg 50366
>emb|AL159995.8| Human DNA sequence from clone RP11-2G13 on chromosome 9p21.1-21.3, complete sequence Length = 165049 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 agtaaataaataaaatatga 37 |||||||||||||||||||| Sbjct: 142856 agtaaataaataaaatatga 142837
>gb|AY332722.1| Homo sapiens insulin-like growth factor 1 receptor (IGF1R) gene, complete cds Length = 309626 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 100 gaggaagaagaggagggaaggagg 123 |||||| ||||||||||||||||| Sbjct: 277794 gaggaaaaagaggagggaaggagg 277771
>emb|AL031586.2|HS324C6 Human DNA sequence from clone RP3-324C6 on chromosome Xq26.1-27.3, complete sequence Length = 116392 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 agtaaataaataaaatatga 37 |||||||||||||||||||| Sbjct: 5908 agtaaataaataaaatatga 5927
>ref|XM_971190.1| PREDICTED: Tribolium castaneum hypothetical protein LOC658418 (LOC658418), mRNA Length = 477 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 ggcggcggcggccatgagga 198 |||||||||||||||||||| Sbjct: 76 ggcggcggcggccatgagga 95
>gb|AC159819.2| Mus musculus BAC clone RP23-180C14 from chromosome 9, complete sequence Length = 211119 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 100 gaggaagaagaggagggaaggagg 123 |||||||||||||||||| ||||| Sbjct: 615 gaggaagaagaggagggagggagg 638
>gb|AC158238.2| Mus musculus BAC clone RP23-106F10 from chromosome 9, complete sequence Length = 242356 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 101 aggaagaagaggagggaaggagga 124 |||||||||||||||| ||||||| Sbjct: 29291 aggaagaagaggaggggaggagga 29314
>emb|AL161574.2|ATCHRIV70 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 70 Length = 198429 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 cagtaaataaataaaatatg 36 |||||||||||||||||||| Sbjct: 177991 cagtaaataaataaaatatg 178010
>emb|AJ400626.1|HSA400626 Homo sapiens SIAH1 gene, exons 1-2 Length = 31705 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 gcggcggcggccatgaggag 199 |||||||||||||||||||| Sbjct: 5307 gcggcggcggccatgaggag 5288
>gb|AC120746.5| Rattus norvegicus BAC CH230-25H1 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 234610 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 gaggaagaagaggagggaag 119 |||||||||||||||||||| Sbjct: 48563 gaggaagaagaggagggaag 48544 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 gaggaagaagaggagggaag 119 |||||||||||||||||||| Sbjct: 48519 gaggaagaagaggagggaag 48500 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 gaggaagaagaggagggaag 119 |||||||||||||||||||| Sbjct: 48384 gaggaagaagaggagggaag 48365
>emb|AJ306557.1|HAN306557 Helianthus annuus hsp20.5 gene for 20.5 kDa heat-shock protein and hsp17.6 gene for 17.6 kDa heat-shock protein Length = 9589 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 106 gaagaggagggaaggaggag 125 |||||||||||||||||||| Sbjct: 5613 gaagaggagggaaggaggag 5594
>emb|BX950186.10| Zebrafish DNA sequence from clone CH211-103O18 in linkage group 15, complete sequence Length = 140307 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 ataaataaaatatgaggaga 42 |||||||||||||||||||| Sbjct: 18528 ataaataaaatatgaggaga 18509
>gb|AC107375.5| Homo sapiens chromosome 8, clone CTA-204B4, complete sequence Length = 115626 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 100 gaggaagaagaggagggaaggagg 123 |||||||| ||||||||||||||| Sbjct: 110930 gaggaagaggaggagggaaggagg 110907
>gb|AC100849.3| Homo sapiens chromosome 8, clone RP11-1080G15, complete sequence Length = 176814 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 gaggaagaagaggagggaag 119 |||||||||||||||||||| Sbjct: 20919 gaggaagaagaggagggaag 20900
>gb|AC010331.8| Homo sapiens chromosome 19 clone CTD-3001H11, complete sequence Length = 114491 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 106 gaagaggagggaaggaggag 125 |||||||||||||||||||| Sbjct: 60101 gaagaggagggaaggaggag 60082
>dbj|AK092279.1| Homo sapiens cDNA FLJ34960 fis, clone NTONG2003515 Length = 2840 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 gagcccgaggaagaagagga 113 |||||||||||||||||||| Sbjct: 1479 gagcccgaggaagaagagga 1498
>ref|NM_166668.1| Drosophila melanogaster muscarinic Acetylcholine Receptor 60C CG4356-RA, transcript variant A (mAcR-60C), mRNA Length = 4782 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 367 gcagcgggcggcggagtggg 386 |||||||||||||||||||| Sbjct: 2277 gcagcgggcggcggagtggg 2296
>gb|AC103693.2| Homo sapiens chromosome 18, clone CTD-2522C24, complete sequence Length = 193404 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 taaataaataaaatatgagg 39 |||||||||||||||||||| Sbjct: 108909 taaataaataaaatatgagg 108890
>ref|NM_079120.2| Drosophila melanogaster muscarinic Acetylcholine Receptor 60C CG4356-RB, transcript variant B (mAcR-60C), mRNA Length = 4833 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 367 gcagcgggcggcggagtggg 386 |||||||||||||||||||| Sbjct: 2328 gcagcgggcggcggagtggg 2347
>gb|AC069029.9| Homo sapiens chromosome 15, clone RP11-654A16, complete sequence Length = 191018 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 100 gaggaagaagaggagggaaggagg 123 |||||| ||||||||||||||||| Sbjct: 58836 gaggaaaaagaggagggaaggagg 58859
>gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0002D01, from chromosome 3, complete sequence Length = 187589 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 aagaagaggagggaaggagg 123 |||||||||||||||||||| Sbjct: 79831 aagaagaggagggaaggagg 79812
>gb|AC068880.6| Homo sapiens chromosome 8, clone RP11-618M23, complete sequence Length = 189810 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 gaggaagaagaggagggaag 119 |||||||||||||||||||| Sbjct: 2949 gaggaagaagaggagggaag 2968
>gb|AC091022.4| Homo sapiens chromosome 8, clone RP11-65A5, complete sequence Length = 155949 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 100 gaggaagaagaggagggaaggagg 123 |||||||| ||||||||||||||| Sbjct: 14407 gaggaagaggaggagggaaggagg 14384
>gb|AC026720.6| Homo sapiens chromosome 5 clone CTD-2193G21, complete sequence Length = 151090 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 gaggaagaagaggagggaag 119 |||||||||||||||||||| Sbjct: 133539 gaggaagaagaggagggaag 133558
>gb|AC008693.9| Homo sapiens chromosome 5 clone CTB-69A13, complete sequence Length = 203568 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 gaggaagaagaggagggaag 119 |||||||||||||||||||| Sbjct: 106961 gaggaagaagaggagggaag 106980
>gb|AC157474.2| Mus musculus BAC clone RP24-565B5 from chromosome 9, complete sequence Length = 192701 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 100 gaggaagaagaggagggaaggagg 123 |||||||||||||||||| ||||| Sbjct: 26528 gaggaagaagaggagggagggagg 26505
>gb|AC008353.4|AC008353 Drosophila melanogaster, chromosome 2R, region 60C-60C, BAC clone BACR02A05, complete sequence Length = 172826 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 367 gcagcgggcggcggagtggg 386 |||||||||||||||||||| Sbjct: 49457 gcagcgggcggcggagtggg 49438
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 aagaagaggagggaaggagg 123 |||||||||||||||||||| Sbjct: 9380552 aagaagaggagggaaggagg 9380533
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 gcccgaggaagaagaggagg 115 |||||||||||||||||||| Sbjct: 19640760 gcccgaggaagaagaggagg 19640741
>gb|AC110183.10| Mus musculus chromosome 3, clone RP24-406M9, complete sequence Length = 171452 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 cagtaaataaataaaatatg 36 |||||||||||||||||||| Sbjct: 36996 cagtaaataaataaaatatg 36977
>gb|AC146165.2| Pan troglodytes BAC clone RP43-36N14 from chromosome 7, complete sequence Length = 159324 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 100 gaggaagaagaggagggaaggagg 123 ||||| |||||||||||||||||| Sbjct: 63378 gaggaggaagaggagggaaggagg 63355
>gb|AC073624.28| Homo sapiens chromosome 17, clone RP11-537K14, complete sequence Length = 145512 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 106 gaagaggagggaaggaggag 125 |||||||||||||||||||| Sbjct: 81884 gaagaggagggaaggaggag 81903
>gb|AC037423.16|AC037423 Homo sapiens chromosome 9 clone RP11-287F15, complete sequence Length = 171029 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 agaggagggaaggaggagtg 127 |||||||||||||||||||| Sbjct: 64993 agaggagggaaggaggagtg 65012
>gb|AC009107.11| Homo sapiens chromosome 16 clone RP11-459F6, complete sequence Length = 208220 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 agaggagggaaggaggagtg 127 |||||||||||||||||||| Sbjct: 149498 agaggagggaaggaggagtg 149517
>dbj|AP004362.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0014E04 Length = 146710 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 gcccgaggaagaagaggagg 115 |||||||||||||||||||| Sbjct: 109212 gcccgaggaagaagaggagg 109193
>gb|AC015916.13| Homo sapiens chromosome 17, clone CTD-2339F15, complete sequence Length = 102564 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 101 aggaagaagaggagggaaggagga 124 |||| ||||||||||||||||||| Sbjct: 67424 aggaggaagaggagggaaggagga 67447
>gb|AC096654.1| Homo sapiens BAC clone RP11-17I18 from 2, complete sequence Length = 153396 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 23 ataaataaaatatgaggagatgaa 46 |||||||||| ||||||||||||| Sbjct: 46145 ataaataaaacatgaggagatgaa 46122
>gb|AC060813.12| Homo sapiens chromosome 8, clone RP11-809N7, complete sequence Length = 144872 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 gaggaagaagaggagggaag 119 |||||||||||||||||||| Sbjct: 40902 gaggaagaagaggagggaag 40921
>gb|AC167467.1| Mus musculus BAC clone RP23-158E17 from chromosome 9, complete sequence Length = 212426 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 102 ggaagaagaggagggaaggaggag 125 |||||||| ||||||||||||||| Sbjct: 176750 ggaagaaggggagggaaggaggag 176773
>dbj|BA000001.2| Pyrococcus horikoshii OT3 DNA, complete genome Length = 1738505 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 aaatatgaggagatgaagag 49 |||||||||||||||||||| Sbjct: 340039 aaatatgaggagatgaagag 340020
>emb|AL672090.5| Mouse DNA sequence from clone RP23-322K21 on chromosome X, complete sequence Length = 211450 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 aaataaataaaatatgagga 40 |||||||||||||||||||| Sbjct: 435 aaataaataaaatatgagga 416
>emb|CR974423.21| Mouse DNA sequence from clone RP23-182F9 on chromosome 12, complete sequence Length = 238441 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 18 agtaaataaataaaatatgaggag 41 ||||||||||||||| |||||||| Sbjct: 73310 agtaaataaataaaaaatgaggag 73333
>gb|AE003464.2| Drosophila melanogaster chromosome 2R, section 71 of 73 of the complete sequence Length = 310958 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 367 gcagcgggcggcggagtggg 386 |||||||||||||||||||| Sbjct: 4635 gcagcgggcggcggagtggg 4616
>dbj|AP002353.4| Homo sapiens genomic DNA, chromosome 11 clone:CTD-2651C21, complete sequence Length = 202607 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 taaataaataaaatatgagg 39 |||||||||||||||||||| Sbjct: 56108 taaataaataaaatatgagg 56127
>gb|AC115725.9| Mus musculus chromosome 5, clone RP23-21A18, complete sequence Length = 278172 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 ggaagaagaggagggaagga 121 |||||||||||||||||||| Sbjct: 159033 ggaagaagaggagggaagga 159052
>gb|BC088711.1| Xenopus laevis hypothetical LOC496243, mRNA (cDNA clone IMAGE:7201876), partial cds Length = 2113 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 atatgaggagatgaagagct 51 |||||||||||||||||||| Sbjct: 1696 atatgaggagatgaagagct 1677
>emb|AL773597.29| Mouse DNA sequence from clone RP23-80A13 on chromosome 4, complete sequence Length = 252286 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 ggaagaagaggagggaagga 121 |||||||||||||||||||| Sbjct: 143616 ggaagaagaggagggaagga 143597
>gb|AC164569.3| Gallus gallus BAC clone CH261-138K23 from chromosome unknown, complete sequence Length = 248284 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 367 gcagcgggcggcggagtggg 386 |||||||||||||||||||| Sbjct: 43253 gcagcgggcggcggagtggg 43234
>emb|BX000474.13| Mouse DNA sequence from clone RP24-80C21 on chromosome 2, complete sequence Length = 205184 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 gaggaagaagaggagggaag 119 |||||||||||||||||||| Sbjct: 116902 gaggaagaagaggagggaag 116883
>gb|BC109031.1| Homo sapiens hypothetical protein LOC257240, mRNA (cDNA clone MGC:125650 IMAGE:40027951), complete cds Length = 2638 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 gagcccgaggaagaagagga 113 |||||||||||||||||||| Sbjct: 1448 gagcccgaggaagaagagga 1467
>emb|AL954824.2| Mouse DNA sequence from clone RP23-326I8 on chromosome 4, complete sequence Length = 46151 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 101 aggaagaagaggagggaaggagga 124 |||||||||||||||| ||||||| Sbjct: 8726 aggaagaagaggaggggaggagga 8703
>gb|U43323.1|ATU43323 Arabidopsis thaliana profilin 2 and profilin 3 genes, complete cds Length = 5329 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 cagtaaataaataaaatatg 36 |||||||||||||||||||| Sbjct: 3805 cagtaaataaataaaatatg 3824
>emb|AL807797.10| Mouse DNA sequence from clone RP23-417D2 on chromosome X, complete sequence Length = 157222 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 aaataaataaaatatgagga 40 |||||||||||||||||||| Sbjct: 156677 aaataaataaaatatgagga 156658
>emb|AL672293.14| Mouse DNA sequence from clone RP23-180D16 on chromosome X, complete sequence Length = 177087 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 taaataaataaaatatgagg 39 |||||||||||||||||||| Sbjct: 144628 taaataaataaaatatgagg 144609
>ref|NM_153270.1| Homo sapiens hypothetical protein LOC257240 (RP11-450P7.3), mRNA Length = 2840 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 gagcccgaggaagaagagga 113 |||||||||||||||||||| Sbjct: 1479 gagcccgaggaagaagagga 1498
>emb|AL732565.9| Mouse DNA sequence from clone RP23-318A9 on chromosome 4, complete sequence Length = 203128 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 agtaaataaataaaatatga 37 |||||||||||||||||||| Sbjct: 142221 agtaaataaataaaatatga 142240
>emb|AL732528.12| Mouse DNA sequence from clone RP23-218B17 on chromosome 2, complete sequence Length = 166465 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 aggaagaagaggagggaagg 120 |||||||||||||||||||| Sbjct: 139714 aggaagaagaggagggaagg 139733
>emb|AL732403.9| Mouse DNA sequence from clone RP23-119L20 on chromosome 2, complete sequence Length = 211892 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 98 ccgaggaagaagaggagggaagga 121 |||| ||||||||||||||||||| Sbjct: 63483 ccgatgaagaagaggagggaagga 63506
>emb|X53423.1|DSCHOS18 D. subobscura s18, s15, s19 and s16 chorion protein genes Length = 6957 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 206 cagcggccgaagcagcagctgccg 229 ||||||||||||||||||| |||| Sbjct: 2988 cagcggccgaagcagcagcagccg 2965
>gb|M23412.1|DROMACE Drosophila muscarinic acetylcholine receptor mRNA, complete cds Length = 4790 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 367 gcagcgggcggcggagtggg 386 |||||||||||||||||||| Sbjct: 2286 gcagcgggcggcggagtggg 2305
>dbj|AB072970.1| Homo sapiens Siah-1 gene, promoter region and exon 1 Length = 3550 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 gcggcggcggccatgaggag 199 |||||||||||||||||||| Sbjct: 3287 gcggcggcggccatgaggag 3268
>dbj|AP000874.4| Homo sapiens genomic DNA, chromosome 18 clone:RP11-760N9, complete sequences Length = 150638 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 cccagtaaataaataaaata 34 |||||||||||||||||||| Sbjct: 131895 cccagtaaataaataaaata 131914 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,575,055 Number of Sequences: 3902068 Number of extensions: 5575055 Number of successful extensions: 241911 Number of sequences better than 10.0: 140 Number of HSP's better than 10.0 without gapping: 139 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 240925 Number of HSP's gapped (non-prelim): 986 length of query: 386 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 364 effective length of database: 17,147,199,772 effective search space: 6241580717008 effective search space used: 6241580717008 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
