ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl12c11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK121389.1| Oryza sativa (japonica cultivar-group) cDNA clon... 113 5e-22
2gb|AY111935.1| Zea mays CL5916_1 mRNA sequence 96 1e-16
3gb|AC151537.1| Oryza sativa (japonica cultivar-group) chromosome... 88 3e-14
4gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 88 3e-14
5dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 88 3e-14
6gb|AC137076.1| Genomic sequence for Oryza sativa, Nipponbare str... 88 3e-14
7ref|NM_129738.3| Arabidopsis thaliana VLN2 (VILLIN 2); actin bin... 54 4e-04
8gb|AY133782.1| Arabidopsis thaliana clone U11765 putative villin... 54 4e-04
9gb|AY080601.1| Arabidopsis thaliana putative villin 2 protein (A... 54 4e-04
10gb|AF081202.1|AF081202 Arabidopsis thaliana villin 2 (VLN2) mRNA... 54 4e-04
11gb|AF088901.1|AF088901 Lilium longiflorum actin bundling protein... 50 0.006
12gb|AC122221.4| Mus musculus BAC clone RP23-128B1 from chromosome... 44 0.38
13gb|AC124703.3| Mus musculus BAC clone RP24-261G23 from chromosom... 44 0.38
14dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete ge... 44 0.38
15ref|NM_115601.2| Arabidopsis thaliana VLN3 (VILLIN 3); actin bin... 42 1.5
16gb|AY576756.1| Hongiella sp. 25III/A02/211 16S ribosomal RNA gen... 42 1.5
17gb|AY264838.1| Flexibacteraceae bacterium IMSNU 14012 16S riboso... 42 1.5
18ref|XM_759363.1| Theileria parva strain Muguga chromosome 4 hypo... 42 1.5
19gb|AY128932.1| Arabidopsis thaliana unknown protein (At3g57410) ... 42 1.5
20gb|AY093052.1| Arabidopsis thaliana unknown protein (At3g57410) ... 42 1.5
21gb|AF081203.1|AF081203 Arabidopsis thaliana villin 3 (VLN3) mRNA... 42 1.5
22ref|XM_520052.1| PREDICTED: Pan troglodytes similar to organic a... 40 5.9
23ref|NM_030958.1| Homo sapiens solute carrier organic anion trans... 40 5.9
24gb|AY248742.1| Lycopersicon esculentum omega-3 fatty acid desatu... 40 5.9
25emb|AL133248.1|ATT8H10 Arabidopsis thaliana DNA chromosome 3, BA... 40 5.9
26gb|AC009930.7| Homo sapiens chromosome 8, clone RP11-114O8, comp... 40 5.9
27gb|AC024680.10| Homo sapiens chromosome 8, clone RP11-347D13, co... 40 5.9
28gb|AC135461.11| Medicago truncatula clone mth2-34f24, complete s... 40 5.9
29gb|AC137701.25| Medicago truncatula clone mth2-35h1, complete se... 40 5.9
30dbj|AK022760.1| Homo sapiens cDNA FLJ12698 fis, clone NT2RP10006... 40 5.9
31gb|AC079089.8| Homo sapiens chromosome 8, clone RP11-159H10, com... 40 5.9
32ref|XM_685791.1| PREDICTED: Danio rerio similar to Ras GTPase-ac... 40 5.9
33gb|AC090686.4| Homo sapiens chromosome 8, clone RP11-771F20, com... 40 5.9
34gb|AC009710.6|AC009710 Homo sapiens chromosome 8, clone RP11-328... 40 5.9
35gb|AF205075.1|AF205075 Homo sapiens organic anion transporter po... 40 5.9
36gb|AC079115.7| Homo sapiens BAC clone RP11-102M8 from 2, complet... 40 5.9
37emb|CR548627.7| Zebrafish DNA sequence from clone DKEYP-24A7 in ... 40 5.9
38dbj|AP006264.1| Homo sapiens genomic DNA, chromosome 8q22.3, clo... 40 5.9 
>dbj|AK121389.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023128M19, full
           insert sequence
          Length = 3343

 Score =  113 bits (57), Expect = 5e-22
 Identities = 81/89 (91%)
 Strand = Plus / Plus

                                                                       
Query: 25  gtgtgtgatgttgcaatcgttgatgatgggaaactacaagcggaatcagactctggtgaa 84
           |||||||||||||| || ||||||||||| ||| | ||||| |||||||| |||||||||
Sbjct: 794 gtgtgtgatgttgcgattgttgatgatggaaaattgcaagcagaatcagattctggtgaa 853

                                        
Query: 85  ttctgggtcctttttggaggttttgcacc 113
           |||||||| ||||||||||||||||||||
Sbjct: 854 ttctgggttctttttggaggttttgcacc 882
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>gb|AY111935.1| Zea mays CL5916_1 mRNA sequence
          Length = 504

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 153/184 (83%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttaaaggagaagtaccatgggggcgtgtgtgatgttgcaatcgttgatgatgggaaacta 60
           ||||||||| | |||||||  || ||||| | ||||||||||||||||||||||||||| 
Sbjct: 84  ttaaaggaggaataccatgacggagtgtgcgctgttgcaatcgttgatgatgggaaactg 143

                                                                       
Query: 61  caagcggaatcagactctggtgaattctgggtcctttttggaggttttgcacctattggg 120
           ||||| |||||||| || || |||||||||||||     ||||||||||| || || |||
Sbjct: 144 caagcagaatcagattcaggagaattctgggtccnnnnnggaggttttgcgccaataggg 203

                                                                       
Query: 121 nnnnnnnctgttagtgatgacgatgttgtactggaaactacagcacccaagctgtacagt 180
           |||||| |  | |||||||| |||||||| || ||||||||| |||| ||||| | ||||
Sbjct: 204 nnnnnngcaataagtgatgatgatgttgttcttgaaactacatcaccaaagcttttcagt 263

               
Query: 181 atca 184
           ||||
Sbjct: 264 atca 267



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 62/71 (87%)
 Strand = Plus / Plus

                                                                       
Query: 255 acttgactgtggggctgaaatgtttgtatgggttggtcgggtaacacaactcgaggacag 314
           ||||||||||||||||||  | || || ||||||||||||||||||||  | ||||||||
Sbjct: 338 acttgactgtggggctgagctattcgtgtgggttggtcgggtaacacaggtagaggacag 397

                      
Query: 315 aaaagctgcca 325
            ||||||||||
Sbjct: 398 gaaagctgcca 408
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>gb|AC151537.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBb0087D01, complete sequence
          Length = 83225

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 62/68 (91%)
 Strand = Plus / Plus

                                                                         
Query: 46    gatgatgggaaactacaagcggaatcagactctggtgaattctgggtcctttttggaggt 105
             |||||||| ||| | ||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 80510 gatgatggaaaattgcaagcagaatcagattctggtgaattctgggttctttttggaggt 80569

                     
Query: 106   tttgcacc 113
             ||||||||
Sbjct: 80570 tttgcacc 80577



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 55/65 (84%)
 Strand = Plus / Plus

                                                                         
Query: 259   gactgtggggctgaaatgtttgtatgggttggtcgggtaacacaactcgaggacagaaaa 318
             ||||||||| ||||  | ||| |||||||||||||  |||||||| | ||||| ||||||
Sbjct: 81545 gactgtgggtctgatttatttatatgggttggtcgactaacacaagtggaggagagaaaa 81604

                  
Query: 319   gctgc 323
             |||||
Sbjct: 81605 gctgc 81609
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 62/68 (91%)
 Strand = Plus / Plus

                                                                            
Query: 46       gatgatgggaaactacaagcggaatcagactctggtgaattctgggtcctttttggaggt 105
                |||||||| ||| | ||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 13617755 gatgatggaaaattgcaagcagaatcagattctggtgaattctgggttctttttggaggt 13617814

                        
Query: 106      tttgcacc 113
                ||||||||
Sbjct: 13617815 tttgcacc 13617822



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 55/65 (84%)
 Strand = Plus / Plus

                                                                            
Query: 259      gactgtggggctgaaatgtttgtatgggttggtcgggtaacacaactcgaggacagaaaa 318
                ||||||||| ||||  | ||| |||||||||||||  |||||||| | ||||| ||||||
Sbjct: 13618790 gactgtgggtctgatttatttatatgggttggtcgactaacacaagtggaggagagaaaa 13618849

                     
Query: 319      gctgc 323
                |||||
Sbjct: 13618850 gctgc 13618854
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 62/68 (91%)
 Strand = Plus / Plus

                                                                            
Query: 46       gatgatgggaaactacaagcggaatcagactctggtgaattctgggtcctttttggaggt 105
                |||||||| ||| | ||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 13612730 gatgatggaaaattgcaagcagaatcagattctggtgaattctgggttctttttggaggt 13612789

                        
Query: 106      tttgcacc 113
                ||||||||
Sbjct: 13612790 tttgcacc 13612797



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 55/65 (84%)
 Strand = Plus / Plus

                                                                            
Query: 259      gactgtggggctgaaatgtttgtatgggttggtcgggtaacacaactcgaggacagaaaa 318
                ||||||||| ||||  | ||| |||||||||||||  |||||||| | ||||| ||||||
Sbjct: 13613765 gactgtgggtctgatttatttatatgggttggtcgactaacacaagtggaggagagaaaa 13613824

                     
Query: 319      gctgc 323
                |||||
Sbjct: 13613825 gctgc 13613829
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>gb|AC137076.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
            OSJNBb0033D20, from chromosome 3, complete sequence
          Length = 128707

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 62/68 (91%)
 Strand = Plus / Plus

                                                                        
Query: 46   gatgatgggaaactacaagcggaatcagactctggtgaattctgggtcctttttggaggt 105
            |||||||| ||| | ||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 8427 gatgatggaaaattgcaagcagaatcagattctggtgaattctgggttctttttggaggt 8486

                    
Query: 106  tttgcacc 113
            ||||||||
Sbjct: 8487 tttgcacc 8494



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 55/65 (84%)
 Strand = Plus / Plus

                                                                        
Query: 259  gactgtggggctgaaatgtttgtatgggttggtcgggtaacacaactcgaggacagaaaa 318
            ||||||||| ||||  | ||| |||||||||||||  |||||||| | ||||| ||||||
Sbjct: 9462 gactgtgggtctgatttatttatatgggttggtcgactaacacaagtggaggagagaaaa 9521

                 
Query: 319  gctgc 323
            |||||
Sbjct: 9522 gctgc 9526
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>ref|NM_129738.3| Arabidopsis thaliana VLN2 (VILLIN 2); actin binding AT2G41740
           (VLN2) mRNA, complete cds
          Length = 3390

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 69/83 (83%)
 Strand = Plus / Plus

                                                                       
Query: 28  tgtgatgttgcaatcgttgatgatgggaaactacaagcggaatcagactctggtgaattc 87
           ||||||||||| || |||||||| || ||| || |  | |||||||| ||||||| ||| 
Sbjct: 828 tgtgatgttgcgattgttgatgacggaaaattagatacagaatcagattctggtgcattt 887

                                  
Query: 88  tgggtcctttttggaggttttgc 110
           |||||||| ||||| ||||||||
Sbjct: 888 tgggtcctctttggtggttttgc 910
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>gb|AY133782.1| Arabidopsis thaliana clone U11765 putative villin 2 protein
           (At2g41740) mRNA, complete cds
          Length = 2962

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 69/83 (83%)
 Strand = Plus / Plus

                                                                       
Query: 28  tgtgatgttgcaatcgttgatgatgggaaactacaagcggaatcagactctggtgaattc 87
           ||||||||||| || |||||||| || ||| || |  | |||||||| ||||||| ||| 
Sbjct: 616 tgtgatgttgcgattgttgatgacggaaaattagatacagaatcagattctggtgcattt 675

                                  
Query: 88  tgggtcctttttggaggttttgc 110
           |||||||| ||||| ||||||||
Sbjct: 676 tgggtcctctttggtggttttgc 698
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>gb|AY080601.1| Arabidopsis thaliana putative villin 2 protein (At2g41740) mRNA,
           complete cds
          Length = 3383

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 69/83 (83%)
 Strand = Plus / Plus

                                                                       
Query: 28  tgtgatgttgcaatcgttgatgatgggaaactacaagcggaatcagactctggtgaattc 87
           ||||||||||| || |||||||| || ||| || |  | |||||||| ||||||| ||| 
Sbjct: 819 tgtgatgttgcgattgttgatgacggaaaattagatacagaatcagattctggtgcattt 878

                                  
Query: 88  tgggtcctttttggaggttttgc 110
           |||||||| ||||| ||||||||
Sbjct: 879 tgggtcctctttggtggttttgc 901
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>gb|AF081202.1|AF081202 Arabidopsis thaliana villin 2 (VLN2) mRNA, complete cds
          Length = 3107

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 69/83 (83%)
 Strand = Plus / Plus

                                                                       
Query: 28  tgtgatgttgcaatcgttgatgatgggaaactacaagcggaatcagactctggtgaattc 87
           ||||||||||| || |||||||| || ||| || |  | |||||||| ||||||| ||| 
Sbjct: 616 tgtgatgttgcgattgttgatgacggaaaattagatacagaatcagattctggtgcattt 675

                                  
Query: 88  tgggtcctttttggaggttttgc 110
           |||||||| ||||| ||||||||
Sbjct: 676 tgggtcctctttggtggttttgc 698
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>gb|AF088901.1|AF088901 Lilium longiflorum actin bundling protein ABP135 (Y5-7) mRNA,
            complete cds
          Length = 3295

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 58/69 (84%)
 Strand = Plus / Plus

                                                                        
Query: 262  tgtggggctgaaatgtttgtatgggttggtcgggtaacacaactcgaggacagaaaagct 321
            ||||| ||||| || ||||| |||||||| || || || ||| | |||||||||||||||
Sbjct: 978  tgtggtgctgagatatttgtttgggttggccgagttacccaagtggaggacagaaaagct 1037

                     
Query: 322  gccactaaa 330
            |||| ||||
Sbjct: 1038 gccagtaaa 1046



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                    
Query: 79  ggtgaattctgggtcctttttggaggttttgcacctattgg 119
           |||||||| |||||||||||||| || |||||||| |||||
Sbjct: 795 ggtgaattttgggtcctttttggtggctttgcaccaattgg 835
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>gb|AC122221.4| Mus musculus BAC clone RP23-128B1 from chromosome 5, complete sequence
          Length = 216207

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 223    aaagcagtccttgagaacacaa 244
              ||||||||||||||||||||||
Sbjct: 202520 aaagcagtccttgagaacacaa 202541
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>gb|AC124703.3| Mus musculus BAC clone RP24-261G23 from chromosome 5, complete sequence
          Length = 183906

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 223   aaagcagtccttgagaacacaa 244
             ||||||||||||||||||||||
Sbjct: 81705 aaagcagtccttgagaacacaa 81684
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>dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete genome
          Length = 3544776

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 357     gaaaaggccaaagacgacaaga 378
               ||||||||||||||||||||||
Sbjct: 1731692 gaaaaggccaaagacgacaaga 1731713
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>ref|NM_115601.2| Arabidopsis thaliana VLN3 (VILLIN 3); actin binding AT3G57410
           (VLN3) mRNA, complete cds
          Length = 3479

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 63/77 (81%)
 Strand = Plus / Plus

                                                                       
Query: 34  gttgcaatcgttgatgatgggaaactacaagcggaatcagactctggtgaattctgggtc 93
           ||||| || ||||||||||| ||| || |  | |||||||| ||||| || |||||||||
Sbjct: 822 gttgctattgttgatgatggaaaattagatacagaatcagattctggcgagttctgggtc 881

                            
Query: 94  ctttttggaggttttgc 110
           || ||||| || |||||
Sbjct: 882 ctctttggggggtttgc 898
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>gb|AY576756.1| Hongiella sp. 25III/A02/211 16S ribosomal RNA gene, partial
           sequence
          Length = 1217

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 161 cagcacccaagctgtacagtatcaacggc 189
           |||||| |||||||| |||||||||||||
Sbjct: 389 cagcactcaagctgtccagtatcaacggc 361
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>gb|AY264838.1| Flexibacteraceae bacterium IMSNU 14012 16S ribosomal RNA gene,
           partial sequence
          Length = 1376

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 161 cagcacccaagctgtacagtatcaacggc 189
           |||||| |||||||| |||||||||||||
Sbjct: 600 cagcactcaagctgtccagtatcaacggc 572
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>ref|XM_759363.1| Theileria parva strain Muguga chromosome 4 hypothetical protein
            (TP04_0819) partial mRNA
          Length = 1939

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 28   tgtgatgttgcaatcgttgatgatg 52
            |||||||||| ||||||||||||||
Sbjct: 1888 tgtgatgttggaatcgttgatgatg 1864
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>gb|AY128932.1| Arabidopsis thaliana unknown protein (At3g57410) mRNA, complete cds
          Length = 2999

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 63/77 (81%)
 Strand = Plus / Plus

                                                                       
Query: 34  gttgcaatcgttgatgatgggaaactacaagcggaatcagactctggtgaattctgggtc 93
           ||||| || ||||||||||| ||| || |  | |||||||| ||||| || |||||||||
Sbjct: 628 gttgctattgttgatgatggaaaattagatacagaatcagattctggcgagttctgggtc 687

                            
Query: 94  ctttttggaggttttgc 110
           || ||||| || |||||
Sbjct: 688 ctctttggggggtttgc 704
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>gb|AY093052.1| Arabidopsis thaliana unknown protein (At3g57410) mRNA, complete cds
          Length = 3548

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 63/77 (81%)
 Strand = Plus / Plus

                                                                       
Query: 34  gttgcaatcgttgatgatgggaaactacaagcggaatcagactctggtgaattctgggtc 93
           ||||| || ||||||||||| ||| || |  | |||||||| ||||| || |||||||||
Sbjct: 823 gttgctattgttgatgatggaaaattagatacagaatcagattctggcgagttctgggtc 882

                            
Query: 94  ctttttggaggttttgc 110
           || ||||| || |||||
Sbjct: 883 ctctttggggggtttgc 899
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>gb|AF081203.1|AF081203 Arabidopsis thaliana villin 3 (VLN3) mRNA, complete cds
          Length = 3335

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 63/77 (81%)
 Strand = Plus / Plus

                                                                       
Query: 34  gttgcaatcgttgatgatgggaaactacaagcggaatcagactctggtgaattctgggtc 93
           ||||| || ||||||||||| ||| || |  | |||||||| ||||| || |||||||||
Sbjct: 702 gttgctattgttgatgatggaaaattagatacagaatcagattctggcgagttctgggtc 761

                            
Query: 94  ctttttggaggttttgc 110
           || ||||| || |||||
Sbjct: 762 ctctttggggggtttgc 778
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>ref|XM_520052.1| PREDICTED: Pan troglodytes similar to organic anion transporter
           polypeptide-related protein 4; solute carrier family 21
           (organic anion transporter), member 15 (LOC464504), mRNA
          Length = 426

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 128 ctgttagtgatgacgatgtt 147
           ||||||||||||||||||||
Sbjct: 314 ctgttagtgatgacgatgtt 333
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>ref|NM_030958.1| Homo sapiens solute carrier organic anion transporter family, member
            5A1 (SLCO5A1), mRNA
          Length = 3692

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 128  ctgttagtgatgacgatgtt 147
            ||||||||||||||||||||
Sbjct: 1779 ctgttagtgatgacgatgtt 1798
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>gb|AY248742.1| Lycopersicon esculentum omega-3 fatty acid desaturase gene, complete
             cds; nuclear gene for chloroplast product
          Length = 43170

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 414   actcaagtcaaaatttgaat 433
             ||||||||||||||||||||
Sbjct: 31142 actcaagtcaaaatttgaat 31161
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>emb|AL133248.1|ATT8H10 Arabidopsis thaliana DNA chromosome 3, BAC clone T8H10
          Length = 87503

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                        
Query: 67   gaatcagactctggtgaattctgggtcctttttggaggttttgc 110
            |||||||| ||||| || ||||||||||| ||||| || |||||
Sbjct: 2338 gaatcagattctggcgagttctgggtcctctttggggggtttgc 2295
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>gb|AC009930.7| Homo sapiens chromosome 8, clone RP11-114O8, complete sequence
          Length = 165662

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 76    tctggtgaattctgggtcct 95
             ||||||||||||||||||||
Sbjct: 73190 tctggtgaattctgggtcct 73171
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>gb|AC024680.10| Homo sapiens chromosome 8, clone RP11-347D13, complete sequence
          Length = 81715

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 128  ctgttagtgatgacgatgtt 147
            ||||||||||||||||||||
Sbjct: 7851 ctgttagtgatgacgatgtt 7870
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>gb|AC135461.11| Medicago truncatula clone mth2-34f24, complete sequence
          Length = 132875

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 414   actcaagtcaaaatttgaat 433
             ||||||||||||||||||||
Sbjct: 19459 actcaagtcaaaatttgaat 19478
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>gb|AC137701.25| Medicago truncatula clone mth2-35h1, complete sequence
          Length = 151417

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 414    actcaagtcaaaatttgaat 433
              ||||||||||||||||||||
Sbjct: 145056 actcaagtcaaaatttgaat 145037
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>dbj|AK022760.1| Homo sapiens cDNA FLJ12698 fis, clone NT2RP1000677, weakly similar to
            SODIUM-INDEPENDENT ORGANIC ANION TRANSPORTER
          Length = 3725

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 128  ctgttagtgatgacgatgtt 147
            ||||||||||||||||||||
Sbjct: 1880 ctgttagtgatgacgatgtt 1899
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>gb|AC079089.8| Homo sapiens chromosome 8, clone RP11-159H10, complete sequence
          Length = 148531

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 128    ctgttagtgatgacgatgtt 147
              ||||||||||||||||||||
Sbjct: 143932 ctgttagtgatgacgatgtt 143951
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>ref|XM_685791.1| PREDICTED: Danio rerio similar to Ras GTPase-activating protein
           SynGAP (Synaptic Ras-GTPase-activating protein 1)
           (Synaptic Ras-GAP 1) (Neuronal RasGAP) (p135 SynGAP)
           (LOC562404), mRNA
          Length = 1800

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 322 gccactaaagccattgaggagttc 345
           |||||||||||||| |||||||||
Sbjct: 67  gccactaaagccatcgaggagttc 90
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>gb|AC090686.4| Homo sapiens chromosome 8, clone RP11-771F20, complete sequence
          Length = 197065

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 414   actcaagtcaaaatttgaat 433
             ||||||||||||||||||||
Sbjct: 85328 actcaagtcaaaatttgaat 85347
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>gb|AC009710.6|AC009710 Homo sapiens chromosome 8, clone RP11-328M16, complete sequence
          Length = 44603

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 414   actcaagtcaaaatttgaat 433
             ||||||||||||||||||||
Sbjct: 44510 actcaagtcaaaatttgaat 44529
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>gb|AF205075.1|AF205075 Homo sapiens organic anion transporter polypeptide-related protein 4
            (OATPRP4) mRNA, complete cds
          Length = 3692

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 128  ctgttagtgatgacgatgtt 147
            ||||||||||||||||||||
Sbjct: 1779 ctgttagtgatgacgatgtt 1798
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>gb|AC079115.7| Homo sapiens BAC clone RP11-102M8 from 2, complete sequence
          Length = 177285

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 81     tgaattctgggtcctttttg 100
              ||||||||||||||||||||
Sbjct: 108393 tgaattctgggtcctttttg 108412
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>emb|CR548627.7| Zebrafish DNA sequence from clone DKEYP-24A7 in linkage group 19,
              complete sequence
          Length = 146348

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 322    gccactaaagccattgaggagttc 345
              |||||||||||||| |||||||||
Sbjct: 113863 gccactaaagccatcgaggagttc 113840
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>dbj|AP006264.1| Homo sapiens genomic DNA, chromosome 8q22.3, clone: KB1334D10, complete
             sequence
          Length = 164084

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 414   actcaagtcaaaatttgaat 433
             ||||||||||||||||||||
Sbjct: 26015 actcaagtcaaaatttgaat 26034


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,930,751
Number of Sequences: 3902068
Number of extensions: 3930751
Number of successful extensions: 69869
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 69756
Number of HSP's gapped (non-prelim): 117
length of query: 439
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 417
effective length of database: 17,147,199,772
effective search space: 7150382304924
effective search space used: 7150382304924
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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