ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl12c07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY224547.1| Oryza sativa (japonica cultivar-group) isolate 24... 216 5e-53
2dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 216 5e-53
3gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 216 5e-53
4emb|AL928781.4|CNS08CCB Oryza sativa chromosome 12, . BAC OSJNBa... 216 5e-53
5emb|AL732537.4|CNS08C9C Oryza sativa chromosome 12, . BAC OSJNBa... 216 5e-53
6gb|AC139748.12| Medicago truncatula clone mth2-15o24, complete s... 50 0.006
7emb|AJ606023.1| Triticum aestivum partial mRNA for putative cent... 48 0.026
8gb|BC075288.1| Xenopus tropicalis cDNA clone IMAGE:6999991 46 0.10
9emb|CR926284.2| Xenopus tropicalis finished cDNA, clone TEgg003l22 46 0.10
10emb|AL138694.18| Human DNA sequence from clone RP11-330C15 on ch... 44 0.40
11emb|CT025577.11| Mouse DNA sequence from clone RP24-172I18 on ch... 44 0.40
12emb|CT571256.7| Mouse DNA sequence from clone RP24-135B13 on chr... 44 0.40
13gb|BC064779.1| Mus musculus fibromodulin, mRNA (cDNA clone MGC:7... 42 1.6
14gb|AC105169.9| Mus musculus chromosome 10, clone RP24-124K4, com... 42 1.6
15ref|NM_021355.2| Mus musculus fibromodulin (Fmod), mRNA 42 1.6
16gb|BC052673.1| Mus musculus fibromodulin, mRNA (cDNA clone IMAGE... 42 1.6
17emb|X94998.1|MMFIBRO M.musculus mRNA for fibromodulin 42 1.6
18gb|AC154872.10| Mus musculus chromosome 1, clone RP23-393C3, com... 42 1.6
19dbj|AK032302.1| Mus musculus adult male olfactory brain cDNA, RI... 42 1.6
20dbj|AK080601.1| Mus musculus 10 days neonate cortex cDNA, RIKEN ... 42 1.6
21dbj|AK082593.1| Mus musculus 0 day neonate cerebellum cDNA, RIKE... 42 1.6
22dbj|AK053317.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN f... 42 1.6
23gb|AC010745.4| Homo sapiens BAC clone RP11-549D18 from 2, comple... 42 1.6
24emb|AL663067.14| Mouse DNA sequence from clone RP23-23G3 on chro... 42 1.6
25ref|XM_869758.1| PREDICTED: Bos taurus similar to Interleukin-2 ... 40 6.2
26gb|AC141583.3| Rattus norvegicus 9 BAC CH230-486H15 (Children's ... 40 6.2
27gb|AC107179.5| Rattus norvegicus 9 BAC CH230-155P21 (Children's ... 40 6.2
28ref|XM_448578.1| Candida glabrata CBS138, CAGL0K08206g partial mRNA 40 6.2
29gb|AC142341.1| Pan troglodytes BAC clone RP43-43C1 from 7, compl... 40 6.2
30emb|AL603840.9| Human DNA sequence from clone RP11-365M18 on chr... 40 6.2
31emb|AL391724.7| Human DNA sequence from clone RP11-350A18 on chr... 40 6.2
32emb|AL359697.23| Human DNA sequence from clone RP11-399C16 on ch... 40 6.2
33emb|AL359543.13| Human DNA sequence from clone RP11-98O1 on chro... 40 6.2
34emb|CR380957.1| Candida glabrata strain CBS138 chromosome K comp... 40 6.2
35gb|AC153815.7| Mus musculus 6 BAC RP23-205F19 (Roswell Park Canc... 40 6.2
36gb|AC112251.5| Homo sapiens BAC clone RP11-734I18 from 4, comple... 40 6.2
37dbj|AP007161.1| Aspergillus oryzae RIB40 genomic DNA, SC012 40 6.2
38gb|AC104582.3| Homo sapiens chromosome 8, clone RP11-1101K5, com... 40 6.2
39gb|AC099022.1| Drosophila melanogaster, chromosome 2L, region 23... 40 6.2
40gb|AC160144.6| Mus musculus 10 BAC RP24-130G2 (Roswell Park Canc... 40 6.2
41gb|AC008321.7| Drosophila melanogaster, chromosome 2L, region 23... 40 6.2
42gb|AC008126.9|AC008126 Homo sapiens 12 BAC RPCI11-90E9 (Roswell ... 40 6.2
43gb|AC012104.6|AC012104 Mus musculus chromosome , clone CT7-478J1... 40 6.2
44gb|AC158804.3| Mus musculus 10 BAC RP24-354M22 (Roswell Park Can... 40 6.2
45gb|AE003580.3| Drosophila melanogaster chromosome 2L, section 11... 40 6.2
46dbj|AP000926.6| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 6.2
47dbj|AP001970.3| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 6.2
48dbj|AP005363.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 6.2
49emb|CR450830.9| Zebrafish DNA sequence from clone CH211-286F9 in... 40 6.2
50gb|AC161343.14| Mus musculus chromosome 8, clone RP23-468H22, co... 40 6.2
51emb|AL929381.9| Mouse DNA sequence from clone RP23-266K3 on chro... 40 6.2
52gb|AC004422.1|AC004422 Drosophila melanogaster (P1 DS08493 (D141... 40 6.2
53emb|AJ851868.2| Mus musculus immunoglobulin heavy chain locus co... 40 6.2
54dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete ge... 40 6.2
55dbj|D78173.1| Spinacia oleracea mRNA for 26S proteasome alpha su... 40 6.2 
>gb|AY224547.1| Oryza sativa (japonica cultivar-group) isolate 24091 centromere
           protein-like protein mRNA, partial cds
          Length = 1537

 Score =  216 bits (109), Expect = 5e-53
 Identities = 300/364 (82%)
 Strand = Plus / Plus

                                                                       
Query: 95  tgttgaggctagagagagagaagagcaaagaactcacccactcagacaaggctcagttca 154
           |||| ||||| |||||||||  |  ||||||||| | | |||||| |||| |||||||||
Sbjct: 326 tgttaaggcttgagagagaggcgcacaaagaactgaactactcaggcaagactcagttca 385

                                                                       
Query: 155 gtgctttgcagaagcagatagccctacttctagaagatggacgcaataaggagaaccagc 214
           ||||| | ||||||||| ||  | | || || ||||| || ||   || |||||||||||
Sbjct: 386 gtgctgtacagaagcagttaagcttcctgctcgaagaaggccgtcgtagggagaaccagc 445

                                                                       
Query: 215 ttcaagaggaggagcacaagattgtcgaagctcagatcgagattttcatcttgcagaagt 274
           ||||||| |||||||| |||||||| ||||||||||| ||||||||| ||||||||||||
Sbjct: 446 ttcaagatgaggagcataagattgttgaagctcagatggagattttcgtcttgcagaagt 505

                                                                       
Query: 275 gtttaggtgacatggcagaagcaaattctgatgtctcagagcaactgcagaagcagcaag 334
           | ||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||
Sbjct: 506 gcttaggtgacatggcagaggcaaattctgatgtctcagggcaactgcagaagcagaaag 565

                                                                       
Query: 335 aggcacacaaaggtcttgaggagaaactggcctatttgtcacanaacaaccagaagctta 394
           ||  |  | ||   |  ||||||||| |  ||| |||| || | |||||||||| | | |
Sbjct: 566 agctatgcgaaatccaggaggagaaattaacctttttgacagaaaacaaccagaggttaa 625

                                                                       
Query: 395 ctgaagggattggttctgtgatggaagtgctgcagtttgatgagaaatatggatccttgg 454
           | ||||| |||||||||||||||||||  || || || ||||| ||||||||||| ||||
Sbjct: 626 cggaaggaattggttctgtgatggaagaactacatttggatgataaatatggatcattgg 685

               
Query: 455 atct 458
           ||||
Sbjct: 686 atct 689



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 38  tggatctccagcaggagaaaaacaagg 64
           ||||||| |||||||||||||||||||
Sbjct: 269 tggatcttcagcaggagaaaaacaagg 295
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  216 bits (109), Expect = 5e-53
 Identities = 300/364 (82%)
 Strand = Plus / Minus

                                                                            
Query: 95       tgttgaggctagagagagagaagagcaaagaactcacccactcagacaaggctcagttca 154
                |||| ||||| |||||||||  |  ||||||||| | | |||||| |||| |||||||||
Sbjct: 25573585 tgttaaggcttgagagagaggcgcacaaagaactgaactactcaggcaagactcagttca 25573526

                                                                            
Query: 155      gtgctttgcagaagcagatagccctacttctagaagatggacgcaataaggagaaccagc 214
                ||||| | ||||||||| ||  | | || || ||||| || ||   || |||||||||||
Sbjct: 25573525 gtgctgtacagaagcagttaagcttcctgctcgaagaaggccgtcgtagggagaaccagc 25573466

                                                                            
Query: 215      ttcaagaggaggagcacaagattgtcgaagctcagatcgagattttcatcttgcagaagt 274
                ||||||| |||||||| |||||||| ||||||||||| ||||||||| ||||||||||||
Sbjct: 25573465 ttcaagatgaggagcataagattgttgaagctcagatggagattttcgtcttgcagaagt 25573406

                                                                            
Query: 275      gtttaggtgacatggcagaagcaaattctgatgtctcagagcaactgcagaagcagcaag 334
                | ||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||
Sbjct: 25573405 gcttaggtgacatggcagaggcaaattctgatgtctcagggcaactgcagaagcagaaag 25573346

                                                                            
Query: 335      aggcacacaaaggtcttgaggagaaactggcctatttgtcacanaacaaccagaagctta 394
                ||  |  | ||   |  ||||||||| |  ||| |||| || | |||||||||| | | |
Sbjct: 25573345 agctatgcgaaatccaggaggagaaattaacctttttgacagaaaacaaccagaggttaa 25573286

                                                                            
Query: 395      ctgaagggattggttctgtgatggaagtgctgcagtttgatgagaaatatggatccttgg 454
                | ||||| |||||||||||||||||||  || || || ||||| ||||||||||| ||||
Sbjct: 25573285 cggaaggaattggttctgtgatggaagaactacatttggatgataaatatggatcattgg 25573226

                    
Query: 455      atct 458
                ||||
Sbjct: 25573225 atct 25573222



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                           
Query: 38       tggatctccagcaggagaaaaacaagg 64
                ||||||| |||||||||||||||||||
Sbjct: 25573642 tggatcttcagcaggagaaaaacaagg 25573616
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  216 bits (109), Expect = 5e-53
 Identities = 300/364 (82%)
 Strand = Plus / Minus

                                                                            
Query: 95       tgttgaggctagagagagagaagagcaaagaactcacccactcagacaaggctcagttca 154
                |||| ||||| |||||||||  |  ||||||||| | | |||||| |||| |||||||||
Sbjct: 25501761 tgttaaggcttgagagagaggcgcacaaagaactgaactactcaggcaagactcagttca 25501702

                                                                            
Query: 155      gtgctttgcagaagcagatagccctacttctagaagatggacgcaataaggagaaccagc 214
                ||||| | ||||||||| ||  | | || || ||||| || ||   || |||||||||||
Sbjct: 25501701 gtgctgtacagaagcagttaagcttcctgctcgaagaaggccgtcgtagggagaaccagc 25501642

                                                                            
Query: 215      ttcaagaggaggagcacaagattgtcgaagctcagatcgagattttcatcttgcagaagt 274
                ||||||| |||||||| |||||||| ||||||||||| ||||||||| ||||||||||||
Sbjct: 25501641 ttcaagatgaggagcataagattgttgaagctcagatggagattttcgtcttgcagaagt 25501582

                                                                            
Query: 275      gtttaggtgacatggcagaagcaaattctgatgtctcagagcaactgcagaagcagcaag 334
                | ||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||
Sbjct: 25501581 gcttaggtgacatggcagaggcaaattctgatgtctcagggcaactgcagaagcagaaag 25501522

                                                                            
Query: 335      aggcacacaaaggtcttgaggagaaactggcctatttgtcacanaacaaccagaagctta 394
                ||  |  | ||   |  ||||||||| |  ||| |||| || | |||||||||| | | |
Sbjct: 25501521 agctatgcgaaatccaggaggagaaattaacctttttgacagaaaacaaccagaggttaa 25501462

                                                                            
Query: 395      ctgaagggattggttctgtgatggaagtgctgcagtttgatgagaaatatggatccttgg 454
                | ||||| |||||||||||||||||||  || || || ||||| ||||||||||| ||||
Sbjct: 25501461 cggaaggaattggttctgtgatggaagaactacatttggatgataaatatggatcattgg 25501402

                    
Query: 455      atct 458
                ||||
Sbjct: 25501401 atct 25501398



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                           
Query: 38       tggatctccagcaggagaaaaacaagg 64
                ||||||| |||||||||||||||||||
Sbjct: 25501818 tggatcttcagcaggagaaaaacaagg 25501792
to top
>emb|AL928781.4|CNS08CCB Oryza sativa chromosome 12, . BAC OSJNBa0070E09 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 144084

 Score =  216 bits (109), Expect = 5e-53
 Identities = 300/364 (82%)
 Strand = Plus / Minus

                                                                          
Query: 95     tgttgaggctagagagagagaagagcaaagaactcacccactcagacaaggctcagttca 154
              |||| ||||| |||||||||  |  ||||||||| | | |||||| |||| |||||||||
Sbjct: 142967 tgttaaggcttgagagagaggcgcacaaagaactgaactactcaggcaagactcagttca 142908

                                                                          
Query: 155    gtgctttgcagaagcagatagccctacttctagaagatggacgcaataaggagaaccagc 214
              ||||| | ||||||||| ||  | | || || ||||| || ||   || |||||||||||
Sbjct: 142907 gtgctgtacagaagcagttaagcttcctgctcgaagaaggccgtcgtagggagaaccagc 142848

                                                                          
Query: 215    ttcaagaggaggagcacaagattgtcgaagctcagatcgagattttcatcttgcagaagt 274
              ||||||| |||||||| |||||||| ||||||||||| ||||||||| ||||||||||||
Sbjct: 142847 ttcaagatgaggagcataagattgttgaagctcagatggagattttcgtcttgcagaagt 142788

                                                                          
Query: 275    gtttaggtgacatggcagaagcaaattctgatgtctcagagcaactgcagaagcagcaag 334
              | ||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||
Sbjct: 142787 gcttaggtgacatggcagaggcaaattctgatgtctcagggcaactgcagaagcagaaag 142728

                                                                          
Query: 335    aggcacacaaaggtcttgaggagaaactggcctatttgtcacanaacaaccagaagctta 394
              ||  |  | ||   |  ||||||||| |  ||| |||| || | |||||||||| | | |
Sbjct: 142727 agctatgcgaaatccaggaggagaaattaacctttttgacagaaaacaaccagaggttaa 142668

                                                                          
Query: 395    ctgaagggattggttctgtgatggaagtgctgcagtttgatgagaaatatggatccttgg 454
              | ||||| |||||||||||||||||||  || || || ||||| ||||||||||| ||||
Sbjct: 142667 cggaaggaattggttctgtgatggaagaactacatttggatgataaatatggatcattgg 142608

                  
Query: 455    atct 458
              ||||
Sbjct: 142607 atct 142604



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 38     tggatctccagcaggagaaaaacaagg 64
              ||||||| |||||||||||||||||||
Sbjct: 143024 tggatcttcagcaggagaaaaacaagg 142998
to top
>emb|AL732537.4|CNS08C9C Oryza sativa chromosome 12, . BAC OSJNBa0036L12 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 127003

 Score =  216 bits (109), Expect = 5e-53
 Identities = 300/364 (82%)
 Strand = Plus / Plus

                                                                          
Query: 95     tgttgaggctagagagagagaagagcaaagaactcacccactcagacaaggctcagttca 154
              |||| ||||| |||||||||  |  ||||||||| | | |||||| |||| |||||||||
Sbjct: 100133 tgttaaggcttgagagagaggcgcacaaagaactgaactactcaggcaagactcagttca 100192

                                                                          
Query: 155    gtgctttgcagaagcagatagccctacttctagaagatggacgcaataaggagaaccagc 214
              ||||| | ||||||||| ||  | | || || ||||| || ||   || |||||||||||
Sbjct: 100193 gtgctgtacagaagcagttaagcttcctgctcgaagaaggccgtcgtagggagaaccagc 100252

                                                                          
Query: 215    ttcaagaggaggagcacaagattgtcgaagctcagatcgagattttcatcttgcagaagt 274
              ||||||| |||||||| |||||||| ||||||||||| ||||||||| ||||||||||||
Sbjct: 100253 ttcaagatgaggagcataagattgttgaagctcagatggagattttcgtcttgcagaagt 100312

                                                                          
Query: 275    gtttaggtgacatggcagaagcaaattctgatgtctcagagcaactgcagaagcagcaag 334
              | ||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||
Sbjct: 100313 gcttaggtgacatggcagaggcaaattctgatgtctcagggcaactgcagaagcagaaag 100372

                                                                          
Query: 335    aggcacacaaaggtcttgaggagaaactggcctatttgtcacanaacaaccagaagctta 394
              ||  |  | ||   |  ||||||||| |  ||| |||| || | |||||||||| | | |
Sbjct: 100373 agctatgcgaaatccaggaggagaaattaacctttttgacagaaaacaaccagaggttaa 100432

                                                                          
Query: 395    ctgaagggattggttctgtgatggaagtgctgcagtttgatgagaaatatggatccttgg 454
              | ||||| |||||||||||||||||||  || || || ||||| ||||||||||| ||||
Sbjct: 100433 cggaaggaattggttctgtgatggaagaactacatttggatgataaatatggatcattgg 100492

                  
Query: 455    atct 458
              ||||
Sbjct: 100493 atct 100496



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 38     tggatctccagcaggagaaaaacaagg 64
              ||||||| |||||||||||||||||||
Sbjct: 100076 tggatcttcagcaggagaaaaacaagg 100102
to top
>gb|AC139748.12| Medicago truncatula clone mth2-15o24, complete sequence
          Length = 144217

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                              
Query: 244   gctcagatcgagattttcatcttgcagaagtgt 276
             |||||||| || |||||||||||||||||||||
Sbjct: 67241 gctcagattgaaattttcatcttgcagaagtgt 67273
to top
>emb|AJ606023.1| Triticum aestivum partial mRNA for putative centromeric protein
          Length = 740

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 211 cagcttcaagaggaggagcacaagattgtcgaagctcaga 250
           ||||||||||||||||||   ||||||||| |||||||||
Sbjct: 178 cagcttcaagaggaggagatgaagattgtcaaagctcaga 217



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 50/60 (83%)
 Strand = Plus / Plus

                                                                       
Query: 351 tgaggagaaactggcctatttgtcacanaacaaccagaagcttactgaagggattggttc 410
           |||||||||| ||| ||  ||||||||  | || |||||||| ||||||||||| |||||
Sbjct: 318 tgaggagaaattggactgcttgtcacaggataatcagaagctaactgaagggatcggttc 377
to top
>gb|BC075288.1| Xenopus tropicalis cDNA clone IMAGE:6999991
          Length = 3659

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 150 gttcagtgctttgcagaagcaga 172
           |||||||||||||||||||||||
Sbjct: 590 gttcagtgctttgcagaagcaga 612
to top
>emb|CR926284.2| Xenopus tropicalis finished cDNA, clone TEgg003l22
          Length = 2569

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 150 gttcagtgctttgcagaagcaga 172
           |||||||||||||||||||||||
Sbjct: 604 gttcagtgctttgcagaagcaga 626
to top
>emb|AL138694.18| Human DNA sequence from clone RP11-330C15 on chromosome 13q33.1-34
             Contains a pseudogene similar to part of host cell factor
             2 (HCF-2) and a CpG island, complete sequence
          Length = 157264

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 105   agagagagagaagagcaaagaa 126
             ||||||||||||||||||||||
Sbjct: 86212 agagagagagaagagcaaagaa 86191
to top
>emb|CT025577.11| Mouse DNA sequence from clone RP24-172I18 on chromosome 12, complete
             sequence
          Length = 143997

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 16    gcagagttagaaggaaggcatt 37
             ||||||||||||||||||||||
Sbjct: 56500 gcagagttagaaggaaggcatt 56521
to top
>emb|CT571256.7| Mouse DNA sequence from clone RP24-135B13 on chromosome 13, complete
             sequence
          Length = 183340

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 290   cagaagcaaattctgatgtctcagag 315
             |||||||||||||||| |||||||||
Sbjct: 38695 cagaagcaaattctgaggtctcagag 38670
to top
>gb|BC064779.1| Mus musculus fibromodulin, mRNA (cDNA clone MGC:76645
            IMAGE:30058603), complete cds
          Length = 2741

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 311  cagagcaactgcagaagcagc 331
            |||||||||||||||||||||
Sbjct: 1535 cagagcaactgcagaagcagc 1515
to top
>gb|AC105169.9| Mus musculus chromosome 10, clone RP24-124K4, complete sequence
          Length = 167310

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 99     gaggctagagagagagaagag 119
              |||||||||||||||||||||
Sbjct: 127720 gaggctagagagagagaagag 127740
to top
>ref|NM_021355.2| Mus musculus fibromodulin (Fmod), mRNA
          Length = 2860

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 311  cagagcaactgcagaagcagc 331
            |||||||||||||||||||||
Sbjct: 1563 cagagcaactgcagaagcagc 1543
to top
>gb|BC052673.1| Mus musculus fibromodulin, mRNA (cDNA clone IMAGE:30058727), partial
            cds
          Length = 2763

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 311  cagagcaactgcagaagcagc 331
            |||||||||||||||||||||
Sbjct: 1571 cagagcaactgcagaagcagc 1551
to top
>emb|X94998.1|MMFIBRO M.musculus mRNA for fibromodulin
          Length = 2728

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 311  cagagcaactgcagaagcagc 331
            |||||||||||||||||||||
Sbjct: 1534 cagagcaactgcagaagcagc 1514
to top
>gb|AC154872.10| Mus musculus chromosome 1, clone RP23-393C3, complete sequence
          Length = 193086

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 311    cagagcaactgcagaagcagc 331
              |||||||||||||||||||||
Sbjct: 142525 cagagcaactgcagaagcagc 142505
to top
>dbj|AK032302.1| Mus musculus adult male olfactory brain cDNA, RIKEN full-length
            enriched library, clone:6430517K11 product:fibromodulin,
            full insert sequence
          Length = 2860

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 311  cagagcaactgcagaagcagc 331
            |||||||||||||||||||||
Sbjct: 1563 cagagcaactgcagaagcagc 1543
to top
>dbj|AK080601.1| Mus musculus 10 days neonate cortex cDNA, RIKEN full-length enriched
            library, clone:A830016K08 product:fibromodulin, full
            insert sequence
          Length = 2759

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 311  cagagcaactgcagaagcagc 331
            |||||||||||||||||||||
Sbjct: 1580 cagagcaactgcagaagcagc 1560
to top
>dbj|AK082593.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length
            enriched library, clone:C230067E21 product:fibromodulin,
            full insert sequence
          Length = 2765

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 311  cagagcaactgcagaagcagc 331
            |||||||||||||||||||||
Sbjct: 1579 cagagcaactgcagaagcagc 1559
to top
>dbj|AK053317.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched
            library, clone:E130009I05 product:fibromodulin, full
            insert sequence
          Length = 2741

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 311  cagagcaactgcagaagcagc 331
            |||||||||||||||||||||
Sbjct: 1563 cagagcaactgcagaagcagc 1543
to top
>gb|AC010745.4| Homo sapiens BAC clone RP11-549D18 from 2, complete sequence
          Length = 189894

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 323  agaagcagcaagaggcacaca 343
            |||||||||||||||||||||
Sbjct: 2793 agaagcagcaagaggcacaca 2813
to top
>emb|AL663067.14| Mouse DNA sequence from clone RP23-23G3 on chromosome 2, complete
              sequence
          Length = 193057

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 105    agagagagagaagagcaaaga 125
              |||||||||||||||||||||
Sbjct: 149822 agagagagagaagagcaaaga 149802
to top
>ref|XM_869758.1| PREDICTED: Bos taurus similar to Interleukin-2 receptor beta chain
           precursor (IL-2 receptor) (P70-75) (High affinity IL-2
           receptor beta subunit) (CD122) (LOC617488), mRNA
          Length = 1603

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 305 atgtctcagagcaactgcag 324
           ||||||||||||||||||||
Sbjct: 831 atgtctcagagcaactgcag 812
to top
>gb|AC141583.3| Rattus norvegicus 9 BAC CH230-486H15 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 132946

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 121   aaagaactcacccactcaga 140
             ||||||||||||||||||||
Sbjct: 46557 aaagaactcacccactcaga 46538
to top
>gb|AC107179.5| Rattus norvegicus 9 BAC CH230-155P21 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 204235

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 121    aaagaactcacccactcaga 140
              ||||||||||||||||||||
Sbjct: 173225 aaagaactcacccactcaga 173206
to top
>ref|XM_448578.1| Candida glabrata CBS138, CAGL0K08206g partial mRNA
          Length = 3510

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 278  taggtgacatggcagaagca 297
            ||||||||||||||||||||
Sbjct: 3208 taggtgacatggcagaagca 3189
to top
>gb|AC142341.1| Pan troglodytes BAC clone RP43-43C1 from 7, complete sequence
          Length = 132532

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 107   agagagagaagagcaaagaa 126
             ||||||||||||||||||||
Sbjct: 34676 agagagagaagagcaaagaa 34695
to top
>emb|AL603840.9| Human DNA sequence from clone RP11-365M18 on chromosome 1 Contains part
              of a novel gene, complete sequence
          Length = 178121

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 100    aggctagagagagagaagag 119
              ||||||||||||||||||||
Sbjct: 109329 aggctagagagagagaagag 109348
to top
>emb|AL391724.7| Human DNA sequence from clone RP11-350A18 on chromosome 13 Contains a
             novel gene, complete sequence
          Length = 141628

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 50    aggagaaaaacaaggttcat 69
             ||||||||||||||||||||
Sbjct: 92695 aggagaaaaacaaggttcat 92676
to top
>emb|AL359697.23| Human DNA sequence from clone RP11-399C16 on chromosome 10 Contains the
             3' end of the MLLT10 gene for myeloid/lymphoid or
             mixed-lineage leukemia (trithorax homolog, Drosophila);
             translocated to, 10 (AF10), the 3' end of the DNAJC1 gene
             for DnaJ (Hsp40) homolog, subfamily C, member 1 (DNAJL1)
             and a CpG island, complete sequence
          Length = 171868

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 217   caagaggaggagcacaagat 236
             ||||||||||||||||||||
Sbjct: 15744 caagaggaggagcacaagat 15763
to top
>emb|AL359543.13| Human DNA sequence from clone RP11-98O1 on chromosome 1 Contains part
             of the DISC1 gene for disrupted in schizophrenia 1 and a
             novel gene, complete sequence
          Length = 98151

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 322   cagaagcagcaagaggcaca 341
             ||||||||||||||||||||
Sbjct: 42902 cagaagcagcaagaggcaca 42883
to top
>emb|CR380957.1| Candida glabrata strain CBS138 chromosome K complete sequence
          Length = 1302002

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 278    taggtgacatggcagaagca 297
              ||||||||||||||||||||
Sbjct: 817782 taggtgacatggcagaagca 817763
to top
>gb|AC153815.7| Mus musculus 6 BAC RP23-205F19 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 230983

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 108    gagagagaagagcaaagaac 127
              ||||||||||||||||||||
Sbjct: 132954 gagagagaagagcaaagaac 132973
to top
>gb|AC112251.5| Homo sapiens BAC clone RP11-734I18 from 4, complete sequence
          Length = 112537

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 105   agagagagagaagagcaaag 124
             ||||||||||||||||||||
Sbjct: 61953 agagagagagaagagcaaag 61972
to top
>dbj|AP007161.1| Aspergillus oryzae RIB40 genomic DNA, SC012
          Length = 2668010

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 416     tggaagtgctgcagtttgat 435
               ||||||||||||||||||||
Sbjct: 1681313 tggaagtgctgcagtttgat 1681294
to top
>gb|AC104582.3| Homo sapiens chromosome 8, clone RP11-1101K5, complete sequence
          Length = 186127

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 104    tagagagagagaagagcaaa 123
              ||||||||||||||||||||
Sbjct: 168458 tagagagagagaagagcaaa 168477
to top
>gb|AC099022.1| Drosophila melanogaster, chromosome 2L, region 23C-23D, BAC clone
             BACR48B06, complete sequence
          Length = 184554

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 311   cagagcaactgcagaagcagcaag 334
             |||||||||||||| |||||||||
Sbjct: 47976 cagagcaactgcagcagcagcaag 47953
to top
>gb|AC160144.6| Mus musculus 10 BAC RP24-130G2 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 163335

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 319    ctgcagaagcagcaagaggc 338
              ||||||||||||||||||||
Sbjct: 145838 ctgcagaagcagcaagaggc 145819
to top
>gb|AC008321.7| Drosophila melanogaster, chromosome 2L, region 23D-23F, BAC clone
              BACR11E09, complete sequence
          Length = 169931

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 311    cagagcaactgcagaagcagcaag 334
              |||||||||||||| |||||||||
Sbjct: 106340 cagagcaactgcagcagcagcaag 106317
to top
>gb|AC008126.9|AC008126 Homo sapiens 12 BAC RPCI11-90E9 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 173545

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 97    ttgaggctagagagagagaa 116
             ||||||||||||||||||||
Sbjct: 74843 ttgaggctagagagagagaa 74824
to top
>gb|AC012104.6|AC012104 Mus musculus chromosome , clone CT7-478J15, complete sequence
          Length = 124373

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 108   gagagagaagagcaaagaac 127
             ||||||||||||||||||||
Sbjct: 22072 gagagagaagagcaaagaac 22091
to top
>gb|AC158804.3| Mus musculus 10 BAC RP24-354M22 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 151309

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 319   ctgcagaagcagcaagaggc 338
             ||||||||||||||||||||
Sbjct: 55022 ctgcagaagcagcaagaggc 55003
to top
>gb|AE003580.3| Drosophila melanogaster chromosome 2L, section 11 of 83 of the complete
             sequence
          Length = 286920

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 311   cagagcaactgcagaagcagcaag 334
             |||||||||||||| |||||||||
Sbjct: 10436 cagagcaactgcagcagcagcaag 10459
to top
>dbj|AP000926.6| Homo sapiens genomic DNA, chromosome 11 clone:RP11-762B21, complete
              sequence
          Length = 196972

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 107    agagagagaagagcaaagaa 126
              ||||||||||||||||||||
Sbjct: 153215 agagagagaagagcaaagaa 153234
to top
>dbj|AP001970.3| Homo sapiens genomic DNA, chromosome 11q, clone:CTD-2216M2, complete
            sequence
          Length = 90211

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 107  agagagagaagagcaaagaa 126
            ||||||||||||||||||||
Sbjct: 7697 agagagagaagagcaaagaa 7716
to top
>dbj|AP005363.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1653C10, complete
             sequence
          Length = 158682

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 104   tagagagagagaagagcaaa 123
             ||||||||||||||||||||
Sbjct: 27656 tagagagagagaagagcaaa 27637
to top
>emb|CR450830.9| Zebrafish DNA sequence from clone CH211-286F9 in linkage group 23,
              complete sequence
          Length = 143914

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 105    agagagagagaagagcaaag 124
              ||||||||||||||||||||
Sbjct: 133754 agagagagagaagagcaaag 133735
to top
>gb|AC161343.14| Mus musculus chromosome 8, clone RP23-468H22, complete sequence
          Length = 182668

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 310   tcagagcaactgcagaagca 329
             ||||||||||||||||||||
Sbjct: 41575 tcagagcaactgcagaagca 41556
to top
>emb|AL929381.9| Mouse DNA sequence from clone RP23-266K3 on chromosome 2, complete
             sequence
          Length = 112349

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 100   aggctagagagagagaagag 119
             ||||||||||||||||||||
Sbjct: 66760 aggctagagagagagaagag 66741
to top
>gb|AC004422.1|AC004422 Drosophila melanogaster (P1 DS08493 (D141)) DNA sequence, complete
             sequence
          Length = 77137

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 311   cagagcaactgcagaagcagcaag 334
             |||||||||||||| |||||||||
Sbjct: 39305 cagagcaactgcagcagcagcaag 39282
to top
>emb|AJ851868.2| Mus musculus immunoglobulin heavy chain locus constant region and partial
              variable region, strain 129/Sv
          Length = 1382053

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 105    agagagagagaagagcaaag 124
              ||||||||||||||||||||
Sbjct: 687396 agagagagagaagagcaaag 687415



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 105    agagagagagaagagcaaag 124
              ||||||||||||||||||||
Sbjct: 626743 agagagagagaagagcaaag 626762
to top
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome
          Length = 430597

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 106    gagagagagaagagcaaaga 125
              ||||||||||||||||||||
Sbjct: 219626 gagagagagaagagcaaaga 219607
to top
>dbj|D78173.1| Spinacia oleracea mRNA for 26S proteasome alpha subunit, complete
           cds
          Length = 1099

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 59  acaaggttcatgatgaagca 78
           ||||||||||||||||||||
Sbjct: 635 acaaggttcatgatgaagca 654


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9,616,230
Number of Sequences: 3902068
Number of extensions: 9616230
Number of successful extensions: 137311
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 137053
Number of HSP's gapped (non-prelim): 258
length of query: 462
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 440
effective length of database: 17,147,199,772
effective search space: 7544767899680
effective search space used: 7544767899680
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top