ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl12c06 |
|---|---|
| Clone Library Name | barley_pub |
>LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 139 bits (351), Expect = 1e-33 Identities = 67/100 (67%), Positives = 82/100 (82%) Frame = +2 Query: 80 VGGIVSDLTGGLRGAHPKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISSTNV 259 +GG++ LTG + A KG+VVLMRKN LD NDFGAT++DG+ E LG+GVTCQLISST V Sbjct: 3 LGGLIDTLTGANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVTCQLISSTAV 62 Query: 260 DHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFD 379 D +NGGRGKVGAEA LEQW+ T+LP +TTGE+KF +TFD Sbjct: 63 DQDNGGRGKVGAEAELEQWV--TSLPSLTTGESKFGLTFD 100
>LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12)| Length = 866 Score = 136 bits (343), Expect = 1e-32 Identities = 67/100 (67%), Positives = 82/100 (82%) Frame = +2 Query: 80 VGGIVSDLTGGLRGAHPKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISSTNV 259 +GGI+ +TG + + KG+VVLMRKN LD NDFGATV+DG+ E LG+GVTCQLISST V Sbjct: 2 LGGIIDTITGSSKQSRLKGTVVLMRKNVLDLNDFGATVIDGLGEFLGKGVTCQLISSTAV 61 Query: 260 DHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFD 379 D NNG RGKVGAEA+LEQW L ++LP +TTGE++F VTFD Sbjct: 62 DPNNGNRGKVGAEASLEQW-LTSSLPSLTTGESRFGVTFD 100
>LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase L-2)| Length = 870 Score = 136 bits (342), Expect = 1e-32 Identities = 68/100 (68%), Positives = 83/100 (83%) Frame = +2 Query: 80 VGGIVSDLTGGLRGAHPKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISSTNV 259 +GGI+ LTG + A KGS+VLMRKNALD NDFGATV+DG++E LGRGVTCQL+SS+ V Sbjct: 2 LGGIIGGLTGN-KNARLKGSLVLMRKNALDINDFGATVIDGISEFLGRGVTCQLVSSSLV 60 Query: 260 DHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFD 379 D NNG RG+VG EA+LEQWL T+LP +TTGE+KF VTF+ Sbjct: 61 DPNNGNRGRVGTEASLEQWL--TSLPSLTTGESKFGVTFE 98
>LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygenase) (r9-LOX1)| Length = 863 Score = 89.0 bits (219), Expect = 3e-18 Identities = 49/100 (49%), Positives = 65/100 (65%) Frame = +2 Query: 80 VGGIVSDLTGGLRGAHPKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISSTNV 259 +GG+ LTG G KG VLM + LD DF A+++D V E+ G +TCQL+S+T Sbjct: 2 LGGLKDKLTGK-NGNKIKGLAVLMSRKLLDPRDFTASLLDNVHEVFGNSITCQLVSATVA 60 Query: 260 DHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFD 379 D NN GRG VG+EANLEQ L T+LP ++ GE+K V F+ Sbjct: 61 DQNNEGRGIVGSEANLEQGL--TDLPSVSQGESKLTVRFN 98
>LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12)| Length = 859 Score = 87.0 bits (214), Expect = 1e-17 Identities = 42/83 (50%), Positives = 57/83 (68%) Frame = +2 Query: 131 KGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISSTNVDHNNGGRGKVGAEANLE 310 KG+VVLM+KN LDFNDF A+ +D + E LG +T +L+SS D NG +GK+G A+LE Sbjct: 22 KGTVVLMKKNVLDFNDFNASFLDRLHEFLGNKITLRLVSSDVTDSENGSKGKLGKAAHLE 81 Query: 311 QWLLPTNLPFITTGENKFAVTFD 379 W+ T + +T GE+ F VTFD Sbjct: 82 DWI--TTITSLTAGESAFKVTFD 102
>LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12)| Length = 859 Score = 80.5 bits (197), Expect = 9e-16 Identities = 49/101 (48%), Positives = 66/101 (65%), Gaps = 1/101 (0%) Frame = +2 Query: 80 VGGIVSDLTGGLRGAHPKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLIS-STN 256 +GGIV + G KG V+LM+KN LDF + GA+V+DG+++LLG+ V+ QLIS S N Sbjct: 3 LGGIVDAILGKDDRPKVKGRVILMKKNVLDFINIGASVVDGISDLLGQKVSIQLISGSVN 62 Query: 257 VDHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFD 379 D G GK+ A LE WL T++ IT GE+ F+VTFD Sbjct: 63 YD---GLEGKLSNPAYLESWL--TDITPITAGESTFSVTFD 98
>LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12)| Length = 860 Score = 75.1 bits (183), Expect = 4e-14 Identities = 46/102 (45%), Positives = 59/102 (57%), Gaps = 5/102 (4%) Frame = +2 Query: 89 IVSDLTGGLRGAHP-----KGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISST 253 ++ L GGL G H KG+VV+M+KNALDF D ++ D + E LG+ V+ QLISS Sbjct: 1 MLGQLVGGLIGGHHDSKKVKGTVVMMKKNALDFTDLAGSLTDKIFEALGQKVSFQLISSV 60 Query: 254 NVDHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFD 379 D NG +GK A LE +LL L + GE F VTFD Sbjct: 61 QSDPANGLQGKHSNPAYLENFLL--TLTPLAAGETAFGVTFD 100
>LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12)| Length = 861 Score = 66.6 bits (161), Expect = 1e-11 Identities = 41/102 (40%), Positives = 54/102 (52%), Gaps = 5/102 (4%) Frame = +2 Query: 89 IVSDLTGGLRGAHP-----KGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISST 253 ++ +T GL G H KG+VV+M KN LDF D ++ + ++LG+ V+ QLISS Sbjct: 1 MIGQITSGLFGGHDDSKKVKGTVVMMNKNVLDFTDLAGSLTGKIFDVLGQKVSFQLISSV 60 Query: 254 NVDHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFD 379 D NG +GK A LE L T P E F VTFD Sbjct: 61 QGDPTNGLQGKHSNPAYLENSLF-TLTPLTAGSETAFGVTFD 101
>LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12)| Length = 877 Score = 64.7 bits (156), Expect = 5e-11 Identities = 41/106 (38%), Positives = 61/106 (57%), Gaps = 6/106 (5%) Frame = +2 Query: 80 VGGIVSDLTGGLRGAHPKGSV----VLMRKNALDFNDFGATVMDGVTELLGR--GVTCQL 241 V G LTG + A +G + VL++K+ L DF A+++DGV +LG GV +L Sbjct: 3 VQGFFDRLTGRNKEAWKEGRIRGTAVLVKKDVLGLGDFHASLLDGVHNILGHKEGVAFRL 62 Query: 242 ISSTNVDHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFD 379 +S+T D +NGGRGK+G A+LE+ L + GE+ F V F+ Sbjct: 63 VSATARDPSNGGRGKLGKPAHLEE--LVVTMKSTAAGESVFRVAFE 106
>LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12)| Length = 864 Score = 63.9 bits (154), Expect = 9e-11 Identities = 46/113 (40%), Positives = 62/113 (54%), Gaps = 19/113 (16%) Frame = +2 Query: 98 DLTGGLRGAHP-KGSVVLMRKNALDFN--------------DFGATV----MDGVTELLG 220 ++TG L H +G+VVLMRKN LDFN D G + +DG+T LG Sbjct: 4 NVTGLLNKGHKIRGTVVLMRKNVLDFNTIVSIGGGNVHGVIDSGINIIGSTLDGLTAFLG 63 Query: 221 RGVTCQLISSTNVDHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFD 379 R V+ QLIS+T D N G+GKVG + LE L +LP + GE+ F + F+ Sbjct: 64 RSVSLQLISATKSDAN--GKGKVGKDTFLEGVL--ASLPTLGAGESAFNIHFE 112
>LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2)| Length = 865 Score = 60.8 bits (146), Expect = 7e-10 Identities = 46/122 (37%), Positives = 61/122 (50%), Gaps = 19/122 (15%) Frame = +2 Query: 71 MFGVGGIVSDLTGGLRGAHP-KGSVVLMRKNALDFNDFG------------------ATV 193 MF V G+ L G G H KG+VVLMRKN LDFN + Sbjct: 1 MFSVPGVSGILNRG--GGHKIKGTVVLMRKNVLDFNSVADLTKGNVGGLIGTGLNVVGST 58 Query: 194 MDGVTELLGRGVTCQLISSTNVDHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVT 373 +D +T LGR V QLIS+T N G+GKVG + LE ++ +LP + GE+ F + Sbjct: 59 LDNLTAFLGRSVALQLISATKPLAN--GKGKVGKDTFLEGIIV--SLPTLGAGESAFNIQ 114 Query: 374 FD 379 F+ Sbjct: 115 FE 116
>LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3)| Length = 857 Score = 59.7 bits (143), Expect = 2e-09 Identities = 42/108 (38%), Positives = 58/108 (53%), Gaps = 15/108 (13%) Frame = +2 Query: 101 LTGGL--RGAHPKGSVVLMRKNALDFN-------------DFGATVMDGVTELLGRGVTC 235 + GGL RG KG+VVLMRKN L N D + +D +T LGR V+ Sbjct: 1 MLGGLLHRGHKIKGTVVLMRKNVLHVNSVTSVGGIIGQGLDLVGSTLDTLTAFLGRPVSL 60 Query: 236 QLISSTNVDHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFD 379 QLIS+T D N G+GK+G LE + T+LP + G++ F + F+ Sbjct: 61 QLISATKADAN--GKGKLGKATFLEG--IITSLPTLGAGQSAFKINFE 104
>LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1)| Length = 839 Score = 59.7 bits (143), Expect = 2e-09 Identities = 37/83 (44%), Positives = 52/83 (62%) Frame = +2 Query: 131 KGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISSTNVDHNNGGRGKVGAEANLE 310 KG+VVLM KN L+ N G+ V D + LGR V+ QLIS+T D + G+GKVG + LE Sbjct: 9 KGTVVLMPKNELEVNPDGSAV-DNLNAFLGRSVSLQLISATKADAH--GKGKVGKDTFLE 65 Query: 311 QWLLPTNLPFITTGENKFAVTFD 379 + T+LP + GE+ F + F+ Sbjct: 66 G--INTSLPTLGAGESAFNIHFE 86
>LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12)| Length = 861 Score = 57.8 bits (138), Expect = 6e-09 Identities = 41/109 (37%), Positives = 58/109 (53%), Gaps = 14/109 (12%) Frame = +2 Query: 95 SDLTGGLRGAHP-KGSVVLMRKNALDFN-------------DFGATVMDGVTELLGRGVT 232 S +TG L H KG+VVLMRKN LD N D + +D +T LGR V+ Sbjct: 3 SGVTGILNRGHKIKGTVVLMRKNVLDINSLTTVGGVIGQGFDILGSTVDNLTAFLGRSVS 62 Query: 233 CQLISSTNVDHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFD 379 QLIS+T D G+GK+G LE + ++LP + G++ F + F+ Sbjct: 63 LQLISATKPDAT--GKGKLGKATFLEG--IISSLPTLGAGQSAFKIHFE 107
>LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12)| Length = 864 Score = 53.9 bits (128), Expect = 9e-08 Identities = 40/110 (36%), Positives = 54/110 (49%), Gaps = 22/110 (20%) Frame = +2 Query: 116 RGAHPKGSVVLMRKNALDFNDFGAT----------------------VMDGVTELLGRGV 229 +G KG+VVLM KN LDFN + V+D T LGR + Sbjct: 7 KGQKIKGTVVLMPKNVLDFNAITSIGKGGVIDTATGILGQGVSLVGGVIDTATSFLGRNI 66 Query: 230 TCQLISSTNVDHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFD 379 + QLIS+T D G GKVG E LE+ LPT LP + ++ F++ F+ Sbjct: 67 SMQLISATQTD--GSGNGKVGKEVYLEKH-LPT-LPTLGARQDAFSIFFE 112
>LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 53.1 bits (126), Expect = 2e-07 Identities = 38/110 (34%), Positives = 53/110 (48%), Gaps = 22/110 (20%) Frame = +2 Query: 116 RGAHPKGSVVLMRKNALDFNDFGAT----------------------VMDGVTELLGRGV 229 RG KG+VVLM KN DFN+F +T ++DG T + R + Sbjct: 7 RGHKIKGTVVLMTKNVFDFNEFVSTTRGGIVGAAGGLFGAATDIVGGIVDGATAIFSRNI 66 Query: 230 TCQLISSTNVDHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFD 379 QLIS+T D G GKVG + LE+ L +LP + ++ F V F+ Sbjct: 67 AIQLISATKTD--GLGNGKVGKQTFLEKHL--PSLPNLGDRQDAFNVYFE 112
>LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12)| Length = 866 Score = 51.6 bits (122), Expect = 5e-07 Identities = 37/108 (34%), Positives = 54/108 (50%), Gaps = 20/108 (18%) Frame = +2 Query: 116 RGAHPKGSVVLMRKNALDFN--------------------DFGATVMDGVTELLGRGVTC 235 RG KG+V+LM+KN LD N +++D T LGR V Sbjct: 8 RGQKLKGTVILMQKNVLDINALTAAQSPSGIIGGAFGVVGSIAGSIIDTATAFLGRSVRL 67 Query: 236 QLISSTNVDHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFD 379 +LIS+T D + G+GKV EA LE L T++P + ++ F+V F+ Sbjct: 68 RLISATVADAS--GKGKVSKEAFLEGLL--TSIPTLGDKQSAFSVHFE 111
>LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94)| Length = 853 Score = 47.0 bits (110), Expect = 1e-05 Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 13/103 (12%) Frame = +2 Query: 110 GLRGAHPKGSVVLMRKNALDFND-------------FGATVMDGVTELLGRGVTCQLISS 250 G +G KG++V+M+KN LD N F + +D +T ++ QLIS+ Sbjct: 5 GQKGQKIKGTMVVMQKNVLDINSITSVGGIVDQGLGFIGSAVDALT-FAATKISIQLISA 63 Query: 251 TNVDHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFD 379 T D GG+GK+G NL + LP + GE + V F+ Sbjct: 64 TKAD---GGKGKIGKSTNLRGKI---TLPTLGAGEQAYDVNFE 100
>PKHA4_HUMAN (Q9H4M7) Pleckstrin homology domain-containing family A member 4| (Phosphoinositol 3-phosphate-binding protein 1) (PEPP-1) Length = 779 Score = 35.8 bits (81), Expect = 0.026 Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 5/73 (6%) Frame = -1 Query: 279 RPPLLWSTLVELMSWQVTPRPRSSVT-----PSMTVAPKSLKSSAFLRMRTTEPLGWAPR 115 R P L++ L S PRPRS+ PS AP + + R+ PL W P+ Sbjct: 228 RSPDLFTPLSRPPSPLSLPRPRSAPARRPPAPSGDTAPPARPHTPLSRIDVRPPLDWGPQ 287 Query: 114 RPPVRSLTMPPTP 76 R ++L+ PPTP Sbjct: 288 R---QTLSRPPTP 297
>YAI7_SCHPO (Q09894) Hypothetical protein C24B11.07c in chromosome I| Length = 561 Score = 32.0 bits (71), Expect = 0.37 Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 1/76 (1%) Frame = -1 Query: 324 GRSHCSRFASAPTFPRPPLLWSTLVELMSWQVTPRPRSSVTPSMTVAPKSLKSSAFLRMR 145 G+ + R SAP+ + + + ++++S RS +PS+ +SLKS R Sbjct: 374 GKPNMGRIPSAPSLSKGRAMTADNMDMLSLTTRRSRRSLYSPSLMQMQQSLKSDYEGLGR 433 Query: 144 TTEPLGWAPR-RPPVR 100 T +P +APR PPVR Sbjct: 434 TFDP-RFAPRGSPPVR 448
>MEGF9_MOUSE (Q8BH27) Multiple epidermal growth factor-like domains 9 precursor| (EGF-like domain-containing protein 5) (Multiple EGF-like domain protein 5) Length = 600 Score = 30.8 bits (68), Expect = 0.83 Identities = 21/70 (30%), Positives = 30/70 (42%) Frame = -1 Query: 315 HCSRFASAPTFPRPPLLWSTLVELMSWQVTPRPRSSVTPSMTVAPKSLKSSAFLRMRTTE 136 H S P+ P P L ST+ + + V ++S TP A +SS + T Sbjct: 128 HTPTTESPPSRPAPTTLASTVGQPPTTSVVTTAQASSTPGTPTAESPDRSSNSSGVPPTA 187 Query: 135 PLGWAPRRPP 106 P+ AP PP Sbjct: 188 PVTEAPTSPP 197
>USH1C_MOUSE (Q9ES64) Harmonin (Usher syndrome type-1C protein homolog) (PDZ| domain-containing protein) Length = 910 Score = 30.4 bits (67), Expect = 1.1 Identities = 19/54 (35%), Positives = 26/54 (48%) Frame = -1 Query: 231 VTPRPRSSVTPSMTVAPKSLKSSAFLRMRTTEPLGWAPRRPPVRSLTMPPTPNI 70 V P P S +PS AP L SS + ++ W R PP + +PP P+I Sbjct: 563 VMPHPPSVNSPSKVPAPPVLPSSGHVSSSSSP---WVQRTPP--PIPIPPPPSI 611
>UL14_EHV1V (P84404) Hypothetical gene 48 protein| Length = 317 Score = 30.0 bits (66), Expect = 1.4 Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Frame = -3 Query: 190 GGAEVVEVERVLAHEDDGAL-GVGAPEAPRQVAHDAADAKHLRSISGECGTLAKLARCGA 14 GG EV + + L HED+ L EAPR AAD RS + ARCGA Sbjct: 132 GGGEVGDPQEWLGHEDEALLMRWMLEEAPRVSTRIAADPHSPRSTCPAPRKAPEDARCGA 191
>UL14_EHV1B (P28949) Hypothetical gene 48 protein| Length = 317 Score = 30.0 bits (66), Expect = 1.4 Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Frame = -3 Query: 190 GGAEVVEVERVLAHEDDGAL-GVGAPEAPRQVAHDAADAKHLRSISGECGTLAKLARCGA 14 GG EV + + L HED+ L EAPR AAD RS + ARCGA Sbjct: 132 GGGEVGDPQEWLGHEDEALLMRWMLEEAPRVSTRIAADPHSPRSTCPAPRKAPEDARCGA 191
>TRPM2_HUMAN (O94759) Transient receptor potential cation channel subfamily M| member 2 (EC 3.6.1.13) (Long transient receptor potential channel 2) (LTrpC2) (LTrpC-2) (Transient receptor potential channel 7) (TrpC7) (Estrogen-responsive element-associated Length = 1503 Score = 29.6 bits (65), Expect = 1.8 Identities = 16/36 (44%), Positives = 22/36 (61%) Frame = +2 Query: 146 LMRKNALDFNDFGATVMDGVTELLGRGVTCQLISST 253 LM+K AL F+DF + G L G+TC+LI +T Sbjct: 856 LMKKAALYFSDFWNKLDVGAILLFVAGLTCRLIPAT 891
>NPAS3_HUMAN (Q8IXF0) Neuronal PAS domain protein 3 (Neuronal PAS3) (Member of| PAS protein 6) (MOP6) Length = 933 Score = 29.6 bits (65), Expect = 1.8 Identities = 12/30 (40%), Positives = 19/30 (63%) Frame = -1 Query: 228 TPRPRSSVTPSMTVAPKSLKSSAFLRMRTT 139 TP P S +PS+ +L+ S F+RM++T Sbjct: 241 TPEPVESTSPSLLTTDNTLERSFFIRMKST 270
>MUC2_HUMAN (Q02817) Mucin-2 precursor (Intestinal mucin 2)| Length = 5179 Score = 29.6 bits (65), Expect = 1.8 Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 2/72 (2%) Frame = -1 Query: 288 TFPRPPLLWSTLVELMSWQVTPRPRSSVT--PSMTVAPKSLKSSAFLRMRTTEPLGWAPR 115 T P PP M+ +TP P S+ T P+ T +P + ++ T P P Sbjct: 1498 TTPSPP---------MTTPITP-PASTTTLPPTTTPSPPTTTTTTPPPTTTPSPPTTTPI 1547 Query: 114 RPPVRSLTMPPT 79 PP + T+PPT Sbjct: 1548 TPPTSTTTLPPT 1559 Score = 29.3 bits (64), Expect = 2.4 Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 4/74 (5%) Frame = -1 Query: 288 TFPRPPLLWSTLVELMSWQVTPRPRSSVT----PSMTVAPKSLKSSAFLRMRTTEPLGWA 121 T P PP + +T + TP P ++ T P+ T +P + TT P Sbjct: 1584 TTPSPPTITTTTPPPTT---TPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTT 1640 Query: 120 PRRPPVRSLTMPPT 79 P PP + T PPT Sbjct: 1641 PSPPPTTTTTPPPT 1654 Score = 28.5 bits (62), Expect = 4.1 Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 2/72 (2%) Frame = -1 Query: 288 TFPRPPLLWSTLVELMSWQVTPRPRSSVT--PSMTVAPKSLKSSAFLRMRTTEPLGWAPR 115 T P PP+ +T + TP P ++ P+ T +P + ++ T P P Sbjct: 1452 TTPSPPISTTTTPPPTT---TPSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPMTTPI 1508 Query: 114 RPPVRSLTMPPT 79 PP + T+PPT Sbjct: 1509 TPPASTTTLPPT 1520
>CSKI1_HUMAN (Q8WXD9) Caskin-1 (CASK-interacting protein 1)| Length = 1431 Score = 29.3 bits (64), Expect = 2.4 Identities = 23/71 (32%), Positives = 30/71 (42%), Gaps = 1/71 (1%) Frame = -1 Query: 291 PTFPRPPLLWSTLVELMSWQVTPRPRSSVTPSMTVAPKSLKSSAFLRMRTTEPL-GWAPR 115 PT + PL E+ TP P S P APK +K+ A L + P +P Sbjct: 1245 PTSKKVPLPGPGSPEVKRAHGTPPPVSPKPPPPPTAPKPVKAVAGLPSGSAGPSPAPSPA 1304 Query: 114 RPPVRSLTMPP 82 R P +L PP Sbjct: 1305 RQPPAALAKPP 1315
>YDC9_SCHPO (Q10172) Hypothetical protein C25G10.09c in chromosome I| Length = 1794 Score = 29.3 bits (64), Expect = 2.4 Identities = 22/74 (29%), Positives = 30/74 (40%) Frame = -1 Query: 294 APTFPRPPLLWSTLVELMSWQVTPRPRSSVTPSMTVAPKSLKSSAFLRMRTTEPLGWAPR 115 AP PP + + V M V +P SSV P+ T +L S P AP+ Sbjct: 1480 APVSQLPPAVPNVPVPSMIPSVAQQPPSSVAPA-TAPSSTLPPSQSSFAHVPSPAPPAPQ 1538 Query: 114 RPPVRSLTMPPTPN 73 P +L+ P N Sbjct: 1539 HPSAAALSSAPADN 1552
>EXTN_SORBI (P24152) Extensin precursor (Proline-rich glycoprotein)| Length = 283 Score = 28.9 bits (63), Expect = 3.2 Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 1/76 (1%) Frame = -1 Query: 291 PTFPRP-PLLWSTLVELMSWQVTPRPRSSVTPSMTVAPKSLKSSAFLRMRTTEPLGWAPR 115 P P+P P ++ + S P P++S P+ T +PK T+P + Sbjct: 84 PATPKPTPPTYTPSPKPKSPVYPPPPKASTPPTYTPSPKP---------PATKPPTYPTP 134 Query: 114 RPPVRSLTMPPTPNIF 67 +PP T PPTP ++ Sbjct: 135 KPPA---TKPPTPPVY 147
>Y091_NPVOP (O10341) Hypothetical 29.3 kDa protein (ORF92)| Length = 279 Score = 28.9 bits (63), Expect = 3.2 Identities = 19/51 (37%), Positives = 20/51 (39%) Frame = -1 Query: 228 TPRPRSSVTPSMTVAPKSLKSSAFLRMRTTEPLGWAPRRPPVRSLTMPPTP 76 TP P S TPS T P S T P P P S T PP+P Sbjct: 136 TPSPTPSPTPSPTPTPSPTPSPTPTPSPTPSP---TPTPSPTPSPTPPPSP 183 Score = 28.1 bits (61), Expect = 5.4 Identities = 24/73 (32%), Positives = 25/73 (34%) Frame = -1 Query: 291 PTFPRPPLLWSTLVELMSWQVTPRPRSSVTPSMTVAPKSLKSSAFLRMRTTEPLGWAPRR 112 P P TL S TP P S TPS T P S T P P Sbjct: 75 PALSPTPTPSPTLSPTPSPTPTPSPTPSPTPSPTPTPSPTPSPTPTPSPTPSPTP-TPSP 133 Query: 111 PPVRSLTMPPTPN 73 P S T PTP+ Sbjct: 134 TPTPSPTPSPTPS 146 Score = 27.3 bits (59), Expect = 9.2 Identities = 24/72 (33%), Positives = 25/72 (34%) Frame = -1 Query: 291 PTFPRPPLLWSTLVELMSWQVTPRPRSSVTPSMTVAPKSLKSSAFLRMRTTEPLGWAPRR 112 PT P T +S TP P S TPS T P S T P P Sbjct: 61 PTPTPTPTPSPTPTPALSPTPTPSPTLSPTPSPTPTPSPTPSPTPSPTPTPSP---TPSP 117 Query: 111 PPVRSLTMPPTP 76 P S T PTP Sbjct: 118 TPTPSPTPSPTP 129
>GLTB_MAIZE (P23225) Ferredoxin-dependent glutamate synthase, chloroplast| precursor (EC 1.4.7.1) (Fd-GOGAT) Length = 1616 Score = 28.5 bits (62), Expect = 4.1 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = -3 Query: 121 APEAPRQVAHDAADAKHLRSISGECG 44 AP AP++ AAD H+ S G CG Sbjct: 74 APPAPQKPTQQAADLNHILSERGACG 99
>NPAS3_MOUSE (Q9QZQ0) Neuronal PAS domain protein 3 (Neuronal PAS3) (Member of| PAS protein 6) (MOP6) Length = 925 Score = 28.5 bits (62), Expect = 4.1 Identities = 11/30 (36%), Positives = 19/30 (63%) Frame = -1 Query: 228 TPRPRSSVTPSMTVAPKSLKSSAFLRMRTT 139 TP P + +PS+ +L+ S F+RM++T Sbjct: 246 TPEPVETTSPSLLTTDNTLERSFFIRMKST 275
>CI079_HUMAN (Q6ZUB1) Protein C9orf79| Length = 1445 Score = 28.5 bits (62), Expect = 4.1 Identities = 15/61 (24%), Positives = 27/61 (44%), Gaps = 3/61 (4%) Frame = -1 Query: 249 ELMSWQVTPRPR-SSVTPSMTVAPKSLKSSAFLRMRTTEPLGWAPRRPPVRS--LTMPPT 79 E + W + RP+ V PS+ +++ S + P W+P+ P+ +T P Sbjct: 565 EYLEWPLKKRPKWKRVLPSLLKKSQAVLSQPTAHLPQERPASWSPKSAPILPGVVTSPEL 624 Query: 78 P 76 P Sbjct: 625 P 625
>MCM3A_MOUSE (Q9WUU9) 80 kda MCM3-associated protein (GANP protein)| Length = 1971 Score = 28.5 bits (62), Expect = 4.1 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = -1 Query: 225 PRPRSSVTPSMTVAPKSLKSSAFLRMRTTEPLGWAPRRPPVRS 97 P P SS TP++ V P + ++ L +T+P P+ PV S Sbjct: 1026 PPPASSATPALHVQPLAPAAAPSLLQASTQPEVLLPKPAPVYS 1068
>HUNB_DROIK (O46242) Protein hunchback (Fragments)| Length = 193 Score = 28.5 bits (62), Expect = 4.1 Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 7/68 (10%) Frame = -1 Query: 279 RPPLLWSTLVELMSWQVTPRPRSSVTPSMTVAPKSLKSSAFLRMRT-------TEPLGWA 121 RPP L + + +M + P P ++ T + T A S ++A + +++ T P+ Sbjct: 101 RPPGLPNPMQTIMPANMRPSPTATTTATTTAAAASTTTAATVALQSNDKLQALTPPMDVT 160 Query: 120 PRRPPVRS 97 P + P +S Sbjct: 161 PPKSPAKS 168
>PCD15_MOUSE (Q99PJ1) Protocadherin-15 precursor| Length = 1943 Score = 28.1 bits (61), Expect = 5.4 Identities = 23/74 (31%), Positives = 33/74 (44%) Frame = -1 Query: 291 PTFPRPPLLWSTLVELMSWQVTPRPRSSVTPSMTVAPKSLKSSAFLRMRTTEPLGWAPRR 112 P PRPP+ ++T +S P P VT S+ P S ++ L + L PR Sbjct: 1754 PPLPRPPIAFTTFPLPLS-PPNPPPPQLVTFSL---PISTPPTSSLPLPPPLSLPPPPRP 1809 Query: 111 PPVRSLTMPPTPNI 70 P R PP+ +I Sbjct: 1810 PAPRLFPQPPSTSI 1823
>TBX10_MOUSE (Q810F8) T-box transcription factor TBX10 (T-box protein 10)| Length = 385 Score = 28.1 bits (61), Expect = 5.4 Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 2/59 (3%) Frame = -1 Query: 240 SWQVTPRPRSSV--TPSMTVAPKSLKSSAFLRMRTTEPLGWAPRRPPVRSLTMPPTPNI 70 SW VTPRP S+ +++P LK SA T++ + R P + P P++ Sbjct: 257 SWPVTPRPLLSIPARSRSSLSPCLLKGSAEREKDTSKASASSSRTPTQPHNQLLPAPDV 315
>SYY_RHIME (Q92PK5) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosine--tRNA| ligase) (TyrRS) Length = 417 Score = 28.1 bits (61), Expect = 5.4 Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 12/75 (16%) Frame = -3 Query: 190 GGAEVVEVERVLAHE-----DDGALGVGAPEAPRQVAHDAADAKHLRSI-------SGEC 47 GG+E+ EV++VLA E A A E R+ + A A++L S+ Sbjct: 291 GGSEINEVKKVLATEVTAMLHGRAAAEQAAETARKTFEEGALAENLPSVEVPAPELESGL 350 Query: 46 GTLAKLARCGAAVSS 2 G L L R G A S+ Sbjct: 351 GLLTLLVRAGLAASN 365
>POLR_KYMVJ (P36304) RNA replicase polyprotein (EC 2.7.7.48)| Length = 1874 Score = 28.1 bits (61), Expect = 5.4 Identities = 22/79 (27%), Positives = 29/79 (36%), Gaps = 4/79 (5%) Frame = -1 Query: 297 SAPTFPRPPLLWSTLVELMSWQVTPRPRSSVTPS--MTVAPKSLKSSAFLRMRTTEPLGW 124 S+P FP PP L + L T P + TP + P + P Sbjct: 620 SSPLFPPPPPLPPSQPPLSQGPATQAPSAQPTPGEPLLAPPTTELKPESSNPNNPNPSSS 679 Query: 123 APRRPPVRSLTM--PPTPN 73 A PP +S + PP PN Sbjct: 680 AGSNPPPKSSSSDNPPAPN 698 Score = 27.7 bits (60), Expect = 7.0 Identities = 26/78 (33%), Positives = 30/78 (38%), Gaps = 2/78 (2%) Frame = -1 Query: 297 SAPTFPRPPLLWSTLVELMSWQVTPR-PRSSVTPSMTVAPKSLKSSAFLRMRTTEPLGWA 121 SA P PLL EL P P S + PKS S P A Sbjct: 647 SAQPTPGEPLLAPPTTELKPESSNPNNPNPSSSAGSNPPPKSSSSD-------NPP---A 696 Query: 120 PRRP-PVRSLTMPPTPNI 70 P +P P S T PP+PN+ Sbjct: 697 PNKPTPTSSSTTPPSPNL 714
>SF3B1_MOUSE (Q99NB9) Splicing factor 3B subunit 1 (Spliceosome-associated| protein 155) (SAP 155) (SF3b155) (Pre-mRNA-splicing factor SF3b 155 kDa subunit) Length = 1304 Score = 27.7 bits (60), Expect = 7.0 Identities = 11/20 (55%), Positives = 12/20 (60%) Frame = -1 Query: 135 PLGWAPRRPPVRSLTMPPTP 76 P G+ P R P R LT PTP Sbjct: 418 PAGYVPIRTPARKLTATPTP 437
>SF3B1_HUMAN (O75533) Splicing factor 3B subunit 1 (Spliceosome-associated| protein 155) (SAP 155) (SF3b155) (Pre-mRNA-splicing factor SF3b 155 kDa subunit) Length = 1304 Score = 27.7 bits (60), Expect = 7.0 Identities = 11/20 (55%), Positives = 12/20 (60%) Frame = -1 Query: 135 PLGWAPRRPPVRSLTMPPTP 76 P G+ P R P R LT PTP Sbjct: 418 PAGYVPIRTPARKLTATPTP 437
>HUNB_DROYA (O62541) Protein hunchback| Length = 759 Score = 27.7 bits (60), Expect = 7.0 Identities = 15/61 (24%), Positives = 31/61 (50%), Gaps = 1/61 (1%) Frame = -1 Query: 276 PPLLWSTLVELMSWQVTPRPRSSVTPSMTVAPKSLKSSAFLRMRT-TEPLGWAPRRPPVR 100 PP L + + + P P+ + T + TVAP ++ + + +++ T P+ P + P + Sbjct: 133 PPGLPNPMQHFYGGNLRPSPQPTPTSASTVAPVAVATGSSEKLQALTPPMDVTPPKSPAK 192 Query: 99 S 97 S Sbjct: 193 S 193
>PRP45_EMENI (Q5AU50) Pre-mRNA-splicing factor prp45 (Pre-mRNA-processing| protein 45) Length = 583 Score = 27.7 bits (60), Expect = 7.0 Identities = 11/26 (42%), Positives = 17/26 (65%) Frame = +2 Query: 56 RDRAKMFGVGGIVSDLTGGLRGAHPK 133 +D A FG+ +++D+TGG GA K Sbjct: 535 KDTADPFGIDSMIADVTGGAGGAGQK 560
>SF3B1_XENLA (O57683) Splicing factor 3B subunit 1 (Spliceosome-associated| protein 155) (SAP 155) (SF3b155) (Pre-mRNA-splicing factor SF3b 155 kDa subunit) (146 kDa nuclear protein) Length = 1307 Score = 27.7 bits (60), Expect = 7.0 Identities = 11/20 (55%), Positives = 12/20 (60%) Frame = -1 Query: 135 PLGWAPRRPPVRSLTMPPTP 76 P G+ P R P R LT PTP Sbjct: 421 PAGYVPIRTPARKLTATPTP 440
>PE55_LUCCU (Q95UE8) Peritrophin-55 precursor| Length = 220 Score = 27.7 bits (60), Expect = 7.0 Identities = 23/88 (26%), Positives = 34/88 (38%), Gaps = 9/88 (10%) Frame = -1 Query: 312 CSRFASAPTFPR---------PPLLWSTLVELMSWQVTPRPRSSVTPSMTVAPKSLKSSA 160 C F APT PL+ T + + TP S TP +T AP S + Sbjct: 84 CDNFIPAPTCEYLKQTTDVECVPLVKPTTAAPTTLKTTP---SKTTPIVTTAPPSTPVPS 140 Query: 159 FLRMRTTEPLGWAPRRPPVRSLTMPPTP 76 + +P +PP + T+ P+P Sbjct: 141 TIVTNKPDPTTPKTTKPPKVTTTVNPSP 168
>IF2_SYNY3 (P72689) Translation initiation factor IF-2| Length = 1001 Score = 27.3 bits (59), Expect = 9.2 Identities = 18/73 (24%), Positives = 32/73 (43%), Gaps = 2/73 (2%) Frame = -1 Query: 294 APTFPRPPLLWSTLVELMSWQVTPR--PRSSVTPSMTVAPKSLKSSAFLRMRTTEPLGWA 121 APT P+PP+ ++ ++ + + P+S P+ +AP + S + P A Sbjct: 114 APTPPQPPVAKASAPKIQKQEEPAQEAPKSVAPPTQPLAPPPVPSLQSPPSKPAPPTPPA 173 Query: 120 PRRPPVRSLTMPP 82 + P L PP Sbjct: 174 KKAAPAPRLAGPP 186
>HUNB_DROME (P05084) Protein hunchback| Length = 758 Score = 27.3 bits (59), Expect = 9.2 Identities = 14/61 (22%), Positives = 31/61 (50%), Gaps = 1/61 (1%) Frame = -1 Query: 276 PPLLWSTLVELMSWQVTPRPRSSVTPSMTVAPKSLKSSAFLRMRT-TEPLGWAPRRPPVR 100 PP L + + + P P+ + T + T+AP ++ + + +++ T P+ P + P + Sbjct: 132 PPGLPNPMQHFYGGNLRPSPQPTPTSASTIAPVAVATGSSEKLQALTPPMDVTPPKSPAK 191 Query: 99 S 97 S Sbjct: 192 S 192
>FLT3L_HUMAN (P49771) SL cytokine precursor (Fms-related tyrosine kinase 3| ligand) (Flt3 ligand) (Flt3L) Length = 235 Score = 27.3 bits (59), Expect = 9.2 Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 14/48 (29%) Frame = -1 Query: 300 ASAPTFPRPPLLWSTLVEL----------MSWQ----VTPRPRSSVTP 199 A+APT P+PPLL L+ + + WQ TPRP V P Sbjct: 176 ATAPTAPQPPLLLLLLLPVGLLLLAAAWCLHWQRTRRRTPRPGEQVPP 223
>UTY_MOUSE (P79457) Ubiquitously transcribed Y chromosome tetratricopeptide| repeat protein (Ubiquitously transcribed TPR protein ON the Y chromosome) (Male-specific histocompatibility antigen H-YDB) Length = 1212 Score = 27.3 bits (59), Expect = 9.2 Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 17/69 (24%) Frame = -1 Query: 222 RPRSSVTPSMTVAPKSLKSSAFLRMRTTEPLGWA----------PRRPPV-------RSL 94 RPRS + PSM+V+ S + R+ G + P RPP + Sbjct: 688 RPRSQIIPSMSVSIYSSSTEVLKACRSLGKNGLSNGHILLDICPPPRPPTSPYPPLPKEK 747 Query: 93 TMPPTPNIF 67 PPTP+I+ Sbjct: 748 LNPPTPSIY 756
>FKBP2_PODAN (Q86ZF2) FK506-binding protein 2 precursor (EC 5.2.1.8)| (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) Length = 185 Score = 27.3 bits (59), Expect = 9.2 Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 3/36 (8%) Frame = -1 Query: 261 STLV---ELMSWQVTPRPRSSVTPSMTVAPKSLKSS 163 STLV EL+ + P+P S VT S T AP+S S+ Sbjct: 117 STLVFETELVGIEGVPKPESIVTKSATDAPESTASA 152
>GUNA_CALSA (P22534) Endoglucanase A precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase A) (Cellulase A) Length = 1742 Score = 27.3 bits (59), Expect = 9.2 Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 3/55 (5%) Frame = -1 Query: 231 VTPRPRSSVTPSMTVAPKSLKSSAFLRMRTTEPLGWA---PRRPPVRSLTMPPTP 76 V+P P +SVTP+ T P + + T P A P P + T+ PTP Sbjct: 641 VSPTPTASVTPTPTPTPTATPTPTPTPTVTPTPTVTATPTPTPTPTSTPTVTPTP 695
>CT032_HUMAN (Q9NQ75) HEF-like protein| Length = 786 Score = 27.3 bits (59), Expect = 9.2 Identities = 16/70 (22%), Positives = 27/70 (38%) Frame = -1 Query: 378 SKVTANLFSPVVMNGRFVGRSHCSRFASAPTFPRPPLLWSTLVELMSWQVTPRPRSSVTP 199 ++V A+ P + G + PT PRPP ++ SW P+P ++ Sbjct: 72 TEVAADRPCPPFLRGLEEAPASSEETYQVPTLPRPPTPGPVYEQMRSWAEGPQPPTAQVY 131 Query: 198 SMTVAPKSLK 169 P S + Sbjct: 132 EFPDPPTSAR 141
>HUNB_DROSE (O62538) Protein hunchback| Length = 757 Score = 27.3 bits (59), Expect = 9.2 Identities = 14/61 (22%), Positives = 31/61 (50%), Gaps = 1/61 (1%) Frame = -1 Query: 276 PPLLWSTLVELMSWQVTPRPRSSVTPSMTVAPKSLKSSAFLRMRT-TEPLGWAPRRPPVR 100 PP L + + + P P+ + T + T+AP ++ + + +++ T P+ P + P + Sbjct: 131 PPGLPNPMQHFYGGNLRPSPQPTPTSASTIAPVAVATGSSEKLQALTPPMDVTPPKSPAK 190 Query: 99 S 97 S Sbjct: 191 S 191
>HEM3_LEIXX (Q6AHF1) Porphobilinogen deaminase (EC 2.5.1.61) (PBG)| (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) Length = 329 Score = 27.3 bits (59), Expect = 9.2 Identities = 23/90 (25%), Positives = 38/90 (42%), Gaps = 5/90 (5%) Frame = +2 Query: 8 HSSTTAS*LSKRATLPRDRAKMFGVGGIVSDLTGGLRGA-----HPKGSVVLMRKNALDF 172 H++T A+ ++RA L A G + + GL P G+ L +A Sbjct: 232 HATTCAATTAERAVLAGLEAGCAAPVGATAMIDDGLLFLTATVYRPDGAAQLTASHAATP 291 Query: 173 NDFGATVMDGVTELLGRGVTCQLISSTNVD 262 + FGA +D +G V +L++S D Sbjct: 292 DSFGAAHLDEAARDVGERVVAELLASGAAD 321 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 38,866,790 Number of Sequences: 219361 Number of extensions: 698788 Number of successful extensions: 3134 Number of sequences better than 10.0: 55 Number of HSP's better than 10.0 without gapping: 3000 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3107 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 1396778976 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
