ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl12c06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|L37358.1|BLYLOXC Hordeum vulgare lipoxygenase 2 (LoxC) mRNA, ... 624 e-176
2ref|XM_469655.1| Oryza sativa (japonica cultivar-group), mRNA 194 1e-46
3dbj|AK073529.1| Oryza sativa (japonica cultivar-group) cDNA clon... 194 1e-46
4gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 180 2e-42
5gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genom... 180 2e-42
6dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 180 2e-42
7emb|X64396.1|OSLRNA O.sativa mRNA for lipoxygenase L-2 178 9e-42
8gb|L35931.1|BLYLOXA Barley lipoxygenase 1 (LoxA) gene, complete cds 172 5e-40
9ref|XM_469409.1| Oryza sativa (japonica cultivar-group), mRNA 168 8e-39
10gb|AF329371.1|AF329371 Zea mays lipoxygenase mRNA, complete cds 145 1e-31
11gb|AF457968.1| Zea mays clone cho1c.pk002.j23, mRNA sequence 145 1e-31
12gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosom... 131 2e-27
13gb|AC097368.3| Oryza sativa chromosome 3 BAC OSJNBb0017F17 genom... 131 2e-27
14gb|AF271894.1|AF271894 Zea mays lipoxygenase (LOX) mRNA, complet... 125 1e-25
15gb|AF464895.1| Oryza sativa basmati-370 lipoxygenase (Lox) gene,... 117 3e-23
16gb|AF465643.1| Zea mays B73 lipoxygenase gene, complete cds 113 4e-22
17gb|U83904.1|HVU83904 Hordeum vulgare lipoxygenase isoenzyme 1 (L... 111 2e-21
18gb|AF465642.1| Zea mays Golden cross bantam-70 lipoxygenase gene... 80 6e-12
19gb|AE005807.1| Caulobacter crescentus CB15 section 133 of 359 of... 44 0.33
20ref|NM_003028.1| Homo sapiens Src homology 2 domain containing a... 42 1.3
21gb|AY596511.1| Helicosporidium sp. ex Simulium jonesii gamma-car... 42 1.3
22ref|XM_391393.1| Gibberella zeae PH-1 chromosome 3 hypothetical ... 42 1.3
23emb|X75342.1|HSSHB H.sapiens SHB mRNA 42 1.3
24gb|AC145811.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.1
25gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome 40 5.1
26gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 compl... 40 5.1
27gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete... 40 5.1
28gb|AY316746.1| Rhizobium sp. NGR234 megaplasmid 2 contig 2, comp... 40 5.1
29emb|AL591790.1|SME591790 Sinorhizobium meliloti 1021 complete ch... 40 5.1
30gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 40 5.1
31gb|AC124918.5| Rattus norvegicus 4 BAC CH230-4H1 (Children's Hos... 40 5.1
32ref|XM_967239.1| PREDICTED: Tribolium castaneum similar to CG119... 40 5.1
33emb|CR555306.1| Azoarcus sp. EbN1 complete genome 40 5.1
34emb|AL731878.4|CNS08C8I Oryza sativa chromosome 3, . BAC OSJNBb0... 40 5.1
35gb|AC079160.5| Homo sapiens BAC clone RP11-176K15 from 4, comple... 40 5.1
36gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome 40 5.1
37dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 5.1
38dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 5.1
39dbj|AK109329.2| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.1
40gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 40 5.1
41gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 5.1 
>gb|L37358.1|BLYLOXC Hordeum vulgare lipoxygenase 2 (LoxC) mRNA, complete cds
          Length = 2910

 Score =  624 bits (315), Expect = e-176
 Identities = 364/375 (97%), Gaps = 4/375 (1%)
 Strand = Plus / Plus

                                                                       
Query: 7   acacagcagcaccacagcgagctaacttagcaagcgtgccacactccccagagatcgagc 66
           |||||||| |||| |||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 4   acacagca-caccgcagcgagctaacttag-aagcgtgccacactccc-agagatcgagc 60

                                                                       
Query: 67  gaagatgtttggcgtcggcggcatcgtgagcgacctgacggggggcctccggggcgccca 126
            |||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 61  -aagatgcttggcgtcggcggcatcgtgagcgacttgacggggggcatccggggcgccca 119

                                                                       
Query: 127 ccccaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacttcggcgc 186
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 cctcaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgacttcggcgc 179

                                                                       
Query: 187 caccgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgccagctcatcag 246
           |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 ccacgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgccagctcatcag 239

                                                                       
Query: 247 ctccaccaacgtcgaccacaacaacggtgggcgcgggaaggtgggcgcggaggcgaacct 306
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 ctccaccaacgtcgaccacaacaacggtgggcgcgggaaggtgggcgcggaggcgaacct 299

                                                                       
Query: 307 ggagcagtggctcctgccgacgaacctgccgttcatcaccaccggcgagaacaagttcgc 366
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 ggagcagtggctcctgccgacgaacctgccgttcatcaccaccggcgagaacaagttcgc 359

                          
Query: 367 cgtcaccttcgactg 381
           |||||||||||||||
Sbjct: 360 cgtcaccttcgactg 374
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>ref|XM_469655.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2613

 Score =  194 bits (98), Expect = 1e-46
 Identities = 173/198 (87%)
 Strand = Plus / Plus

                                                                       
Query: 121 cgcccaccccaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgactt 180
           ||||| || |||||||||| |||||||||||||||||||||| |||||| ||||||||||
Sbjct: 42  cgcccgcctcaagggctccctcgtcctcatgcgcaagaacgccctcgacatcaacgactt 101

                                                                       
Query: 181 cggcgccaccgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgccagct 240
           ||||||||||||||| |||||| || ||||| ||||||||||||||||||||||||||||
Sbjct: 102 cggcgccaccgtcatcgacggcatctccgagttcctcggccgcggcgtcacctgccagct 161

                                                                       
Query: 241 catcagctccaccaacgtcgaccacaacaacggtgggcgcgggaaggtgggcgcggaggc 300
           | |||||||| ||  |||||||| |||||| ||     | |||| ||||||  |||||||
Sbjct: 162 cgtcagctcctccctcgtcgaccccaacaatgggaacagggggagggtggggacggaggc 221

                             
Query: 301 gaacctggagcagtggct 318
           || |||||||||||||||
Sbjct: 222 gagcctggagcagtggct 239
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>dbj|AK073529.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046E17, full
           insert sequence
          Length = 2928

 Score =  194 bits (98), Expect = 1e-46
 Identities = 173/198 (87%)
 Strand = Plus / Plus

                                                                       
Query: 121 cgcccaccccaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgactt 180
           ||||| || |||||||||| |||||||||||||||||||||| |||||| ||||||||||
Sbjct: 157 cgcccgcctcaagggctccctcgtcctcatgcgcaagaacgccctcgacatcaacgactt 216

                                                                       
Query: 181 cggcgccaccgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgccagct 240
           ||||||||||||||| |||||| || ||||| ||||||||||||||||||||||||||||
Sbjct: 217 cggcgccaccgtcatcgacggcatctccgagttcctcggccgcggcgtcacctgccagct 276

                                                                       
Query: 241 catcagctccaccaacgtcgaccacaacaacggtgggcgcgggaaggtgggcgcggaggc 300
           | |||||||| ||  |||||||| |||||| ||     | |||| ||||||  |||||||
Sbjct: 277 cgtcagctcctccctcgtcgaccccaacaatgggaacagggggagggtggggacggaggc 336

                             
Query: 301 gaacctggagcagtggct 318
           || |||||||||||||||
Sbjct: 337 gagcctggagcagtggct 354
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  180 bits (91), Expect = 2e-42
 Identities = 130/143 (90%)
 Strand = Plus / Plus

                                                                            
Query: 121      cgcccaccccaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgactt 180
                ||||| || |||||||||| |||||||||||||||||||||| |||||| ||||||||||
Sbjct: 30023301 cgcccgcctcaagggctccctcgtcctcatgcgcaagaacgccctcgacatcaacgactt 30023360

                                                                            
Query: 181      cggcgccaccgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgccagct 240
                ||||||||||||||| |||||| || ||||| ||||||||||||||||||||||||||||
Sbjct: 30023361 cggcgccaccgtcatcgacggcatctccgagttcctcggccgcggcgtcacctgccagct 30023420

                                       
Query: 241      catcagctccaccaacgtcgacc 263
                | |||||||| ||  ||||||||
Sbjct: 30023421 cgtcagctcctccctcgtcgacc 30023443



 Score =  131 bits (66), Expect = 2e-27
 Identities = 105/118 (88%)
 Strand = Plus / Plus

                                                                            
Query: 146      ctcatgcgcaagaacgcgctcgacttcaacgacttcggcgccaccgtcatggacggcgtc 205
                ||||||||||||||||  |||||| ||||||||||||||||||||||||| |||||| ||
Sbjct: 27798775 ctcatgcgcaagaacgtcctcgacctcaacgacttcggcgccaccgtcatcgacggcctc 27798834

                                                                          
Query: 206      accgagctcctcggccgcggcgtcacctgccagctcatcagctccaccaacgtcgacc 263
                  |||| ||||||||   ||||||||||||||||||||||||||||||  ||||||||
Sbjct: 27798835 ggcgagttcctcggcaagggcgtcacctgccagctcatcagctccaccgccgtcgacc 27798892



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                      
Query: 281      gggaaggtgggcgcggaggcgaacctggagcagtggct 318
                ||||||||||| |||||||||| |||||||||||||||
Sbjct: 27799308 gggaaggtgggggcggaggcgagcctggagcagtggct 27799345



 Score = 44.1 bits (22), Expect = 0.33
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                      
Query: 281      gggaaggtgggcgcggaggcgaacctggagcagtggct 318
                |||| ||||||  ||||||||| |||||||||||||||
Sbjct: 30023539 gggagggtggggacggaggcgagcctggagcagtggct 30023576



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 77       ggcgtcggcggcatcgtgag 96
                ||||||||||||||||||||
Sbjct: 24817033 ggcgtcggcggcatcgtgag 24817052
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>gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genomic sequence, complete
             sequence
          Length = 155106

 Score =  180 bits (91), Expect = 2e-42
 Identities = 130/143 (90%)
 Strand = Plus / Minus

                                                                         
Query: 121   cgcccaccccaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgactt 180
             ||||| || |||||||||| |||||||||||||||||||||| |||||| ||||||||||
Sbjct: 84450 cgcccgcctcaagggctccctcgtcctcatgcgcaagaacgccctcgacatcaacgactt 84391

                                                                         
Query: 181   cggcgccaccgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgccagct 240
             ||||||||||||||| |||||| || ||||| ||||||||||||||||||||||||||||
Sbjct: 84390 cggcgccaccgtcatcgacggcatctccgagttcctcggccgcggcgtcacctgccagct 84331

                                    
Query: 241   catcagctccaccaacgtcgacc 263
             | |||||||| ||  ||||||||
Sbjct: 84330 cgtcagctcctccctcgtcgacc 84308



 Score = 44.1 bits (22), Expect = 0.33
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                   
Query: 281   gggaaggtgggcgcggaggcgaacctggagcagtggct 318
             |||| ||||||  ||||||||| |||||||||||||||
Sbjct: 84212 gggagggtggggacggaggcgagcctggagcagtggct 84175
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  180 bits (91), Expect = 2e-42
 Identities = 130/143 (90%)
 Strand = Plus / Plus

                                                                            
Query: 121      cgcccaccccaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgactt 180
                ||||| || |||||||||| |||||||||||||||||||||| |||||| ||||||||||
Sbjct: 30114723 cgcccgcctcaagggctccctcgtcctcatgcgcaagaacgccctcgacatcaacgactt 30114782

                                                                            
Query: 181      cggcgccaccgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgccagct 240
                ||||||||||||||| |||||| || ||||| ||||||||||||||||||||||||||||
Sbjct: 30114783 cggcgccaccgtcatcgacggcatctccgagttcctcggccgcggcgtcacctgccagct 30114842

                                       
Query: 241      catcagctccaccaacgtcgacc 263
                | |||||||| ||  ||||||||
Sbjct: 30114843 cgtcagctcctccctcgtcgacc 30114865



 Score =  131 bits (66), Expect = 2e-27
 Identities = 105/118 (88%)
 Strand = Plus / Plus

                                                                            
Query: 146      ctcatgcgcaagaacgcgctcgacttcaacgacttcggcgccaccgtcatggacggcgtc 205
                ||||||||||||||||  |||||| ||||||||||||||||||||||||| |||||| ||
Sbjct: 27890099 ctcatgcgcaagaacgtcctcgacctcaacgacttcggcgccaccgtcatcgacggcctc 27890158

                                                                          
Query: 206      accgagctcctcggccgcggcgtcacctgccagctcatcagctccaccaacgtcgacc 263
                  |||| ||||||||   ||||||||||||||||||||||||||||||  ||||||||
Sbjct: 27890159 ggcgagttcctcggcaagggcgtcacctgccagctcatcagctccaccgccgtcgacc 27890216



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                      
Query: 281      gggaaggtgggcgcggaggcgaacctggagcagtggct 318
                ||||||||||| |||||||||| |||||||||||||||
Sbjct: 27890632 gggaaggtgggggcggaggcgagcctggagcagtggct 27890669



 Score = 44.1 bits (22), Expect = 0.33
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                      
Query: 281      gggaaggtgggcgcggaggcgaacctggagcagtggct 318
                |||| ||||||  ||||||||| |||||||||||||||
Sbjct: 30114961 gggagggtggggacggaggcgagcctggagcagtggct 30114998



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 77       ggcgtcggcggcatcgtgag 96
                ||||||||||||||||||||
Sbjct: 24908356 ggcgtcggcggcatcgtgag 24908375
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>emb|X64396.1|OSLRNA O.sativa mRNA for lipoxygenase L-2
          Length = 2830

 Score =  178 bits (90), Expect = 9e-42
 Identities = 171/198 (86%)
 Strand = Plus / Plus

                                                                       
Query: 121 cgcccaccccaagggctccgtcgtcctcatgcgcaagaacgcgctcgacttcaacgactt 180
           ||||| || |||||||||| |||||||||||||||||||||| |||||| ||||||||||
Sbjct: 139 cgcccgcctcaagggctccctcgtcctcatgcgcaagaacgccctcgacatcaacgactt 198

                                                                       
Query: 181 cggcgccaccgtcatggacggcgtcaccgagctcctcggccgcggcgtcacctgccagct 240
           ||||||||||||||| ||  || || ||||| ||||||||||||||||||||||||||||
Sbjct: 199 cggcgccaccgtcatcgagcgcatctccgagttcctcggccgcggcgtcacctgccagct 258

                                                                       
Query: 241 catcagctccaccaacgtcgaccacaacaacggtgggcgcgggaaggtgggcgcggaggc 300
           | |||||||| ||  |||||||| |||||| ||     | |||| ||||||  |||||||
Sbjct: 259 cgtcagctcctccctcgtcgaccccaacaatgggaacagggggagggtggggacggaggc 318

                             
Query: 301 gaacctggagcagtggct 318
           || |||||||||||||||
Sbjct: 319 gagcctggagcagtggct 336
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>gb|L35931.1|BLYLOXA Barley lipoxygenase 1 (LoxA) gene, complete cds
          Length = 2818

 Score =  172 bits (87), Expect = 5e-40
 Identities = 150/171 (87%)
 Strand = Plus / Plus

                                                                       
Query: 146 ctcatgcgcaagaacgcgctcgacttcaacgacttcggcgccaccgtcatggacggcgtc 205
           |||||||||||||||| ||| ||| |||||||||||||||||||| |||| |||||| ||
Sbjct: 141 ctcatgcgcaagaacgtgctggacctcaacgacttcggcgccaccatcatcgacggcatc 200

                                                                       
Query: 206 accgagctcctcggccgcggcgtcacctgccagctcatcagctccaccaacgtcgaccac 265
             |||| ||||||||   ||||||||||||||||| ||||||||||||  ||||||||| 
Sbjct: 201 ggcgagttcctcggcaagggcgtcacctgccagcttatcagctccaccgccgtcgaccaa 260

                                                              
Query: 266 aacaacggtgggcgcgggaaggtgggcgcggaggcgaacctggagcagtgg 316
            ||||||| || |||||||||||||||||||||||| | ||||||||||||
Sbjct: 261 gacaacggcggtcgcgggaaggtgggcgcggaggcggagctggagcagtgg 311
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>ref|XM_469409.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2601

 Score =  168 bits (85), Expect = 8e-39
 Identities = 151/173 (87%)
 Strand = Plus / Plus

                                                                       
Query: 146 ctcatgcgcaagaacgcgctcgacttcaacgacttcggcgccaccgtcatggacggcgtc 205
           ||||||||||||||||  |||||| ||||||||||||||||||||||||| |||||| ||
Sbjct: 70  ctcatgcgcaagaacgtcctcgacctcaacgacttcggcgccaccgtcatcgacggcctc 129

                                                                       
Query: 206 accgagctcctcggccgcggcgtcacctgccagctcatcagctccaccaacgtcgaccac 265
             |||| ||||||||   ||||||||||||||||||||||||||||||  ||||||||  
Sbjct: 130 ggcgagttcctcggcaagggcgtcacctgccagctcatcagctccaccgccgtcgaccca 189

                                                                
Query: 266 aacaacggtgggcgcgggaaggtgggcgcggaggcgaacctggagcagtggct 318
           ||||||||    || ||||||||||| |||||||||| |||||||||||||||
Sbjct: 190 aacaacggcaaccgggggaaggtgggggcggaggcgagcctggagcagtggct 242
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>gb|AF329371.1|AF329371 Zea mays lipoxygenase mRNA, complete cds
          Length = 2595

 Score =  145 bits (73), Expect = 1e-31
 Identities = 148/173 (85%)
 Strand = Plus / Plus

                                                                       
Query: 146 ctcatgcgcaagaacgcgctcgacttcaacgacttcggcgccaccgtcatggacggcgtc 205
           |||||||||||||||| ||| ||| ||||||||||||||||||||||| | ||| || ||
Sbjct: 70  ctcatgcgcaagaacgtgctggacctcaacgacttcggcgccaccgtcgttgacagcatc 129

                                                                       
Query: 206 accgagctcctcggccgcggcgtcacctgccagctcatcagctccaccaacgtcgaccac 265
           | |||| ||||||||   || |||||||||||||||||||||||||||  |||||||  |
Sbjct: 130 agcgagttcctcggcaagggggtcacctgccagctcatcagctccaccctcgtcgacgcc 189

                                                                
Query: 266 aacaacggtgggcgcgggaaggtgggcgcggaggcgaacctggagcagtggct 318
           ||||||||    ||||||  ||| || ||||||||||||||||||||||||||
Sbjct: 190 aacaacggcaaccgcgggcgggtcggggcggaggcgaacctggagcagtggct 242
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>gb|AF457968.1| Zea mays clone cho1c.pk002.j23, mRNA sequence
          Length = 515

 Score =  145 bits (73), Expect = 1e-31
 Identities = 148/173 (85%)
 Strand = Plus / Plus

                                                                       
Query: 146 ctcatgcgcaagaacgcgctcgacttcaacgacttcggcgccaccgtcatggacggcgtc 205
           |||||||||||||||| ||| ||| ||||||||||||||||||||||| | ||| || ||
Sbjct: 132 ctcatgcgcaagaacgtgctggacctcaacgacttcggcgccaccgtcgttgacagcatc 191

                                                                       
Query: 206 accgagctcctcggccgcggcgtcacctgccagctcatcagctccaccaacgtcgaccac 265
           | |||| ||||||||   || |||||||||||||||||||||||||||  |||||||  |
Sbjct: 192 agcgagttcctcggcaagggggtcacctgccagctcatcagctccaccctcgtcgacgcc 251

                                                                
Query: 266 aacaacggtgggcgcgggaaggtgggcgcggaggcgaacctggagcagtggct 318
           ||||||||    ||||||  ||| || ||||||||||||||||||||||||||
Sbjct: 252 aacaacggcaaccgcgggcgggtcggggcggaggcgaacctggagcagtggct 304
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>gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0024B16
             map S2606, complete sequence
          Length = 124140

 Score =  131 bits (66), Expect = 2e-27
 Identities = 105/118 (88%)
 Strand = Plus / Plus

                                                                         
Query: 146   ctcatgcgcaagaacgcgctcgacttcaacgacttcggcgccaccgtcatggacggcgtc 205
             ||||||||||||||||  |||||| ||||||||||||||||||||||||| |||||| ||
Sbjct: 42905 ctcatgcgcaagaacgtcctcgacctcaacgacttcggcgccaccgtcatcgacggcctc 42964

                                                                       
Query: 206   accgagctcctcggccgcggcgtcacctgccagctcatcagctccaccaacgtcgacc 263
               |||| ||||||||   ||||||||||||||||||||||||||||||  ||||||||
Sbjct: 42965 ggcgagttcctcggcaagggcgtcacctgccagctcatcagctccaccgccgtcgacc 43022



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                   
Query: 281   gggaaggtgggcgcggaggcgaacctggagcagtggct 318
             ||||||||||| |||||||||| |||||||||||||||
Sbjct: 43438 gggaaggtgggggcggaggcgagcctggagcagtggct 43475
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>gb|AC097368.3| Oryza sativa chromosome 3 BAC OSJNBb0017F17 genomic sequence, complete
             sequence
          Length = 119329

 Score =  131 bits (66), Expect = 2e-27
 Identities = 105/118 (88%)
 Strand = Plus / Minus

                                                                         
Query: 146   ctcatgcgcaagaacgcgctcgacttcaacgacttcggcgccaccgtcatggacggcgtc 205
             ||||||||||||||||  |||||| ||||||||||||||||||||||||| |||||| ||
Sbjct: 15118 ctcatgcgcaagaacgtcctcgacctcaacgacttcggcgccaccgtcatcgacggcctc 15059

                                                                       
Query: 206   accgagctcctcggccgcggcgtcacctgccagctcatcagctccaccaacgtcgacc 263
               |||| ||||||||   ||||||||||||||||||||||||||||||  ||||||||
Sbjct: 15058 ggcgagttcctcggcaagggcgtcacctgccagctcatcagctccaccgccgtcgacc 15001



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                   
Query: 281   gggaaggtgggcgcggaggcgaacctggagcagtggct 318
             ||||||||||| |||||||||| |||||||||||||||
Sbjct: 14585 gggaaggtgggggcggaggcgagcctggagcagtggct 14548
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>gb|AF271894.1|AF271894 Zea mays lipoxygenase (LOX) mRNA, complete cds
          Length = 2845

 Score =  125 bits (63), Expect = 1e-25
 Identities = 99/111 (89%)
 Strand = Plus / Plus

                                                                       
Query: 208 cgagctcctcggccgcggcgtcacctgccagctcatcagctccaccaacgtcgaccacaa 267
           |||| |||||||||||||||||||||||||||| ||||||||||||  ||||||||  ||
Sbjct: 153 cgagttcctcggccgcggcgtcacctgccagcttatcagctccaccgtcgtcgaccctaa 212

                                                              
Query: 268 caacggtgggcgcgggaaggtgggcgcggaggcgaacctggagcagtggct 318
           ||||||    ||||||||| ||||||||||||||| |||||||||||||||
Sbjct: 213 caacggcaaccgcgggaagttgggcgcggaggcgagcctggagcagtggct 263
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>gb|AF464895.1| Oryza sativa basmati-370 lipoxygenase (Lox) gene, partial cds
          Length = 1160

 Score =  117 bits (59), Expect = 3e-23
 Identities = 89/99 (89%)
 Strand = Plus / Plus

                                                                       
Query: 152 cgcaagaacgcgctcgacttcaacgacttcggcgccaccgtcatggacggcgtcaccgag 211
           ||||||||||| |||||| ||||||||||||||||||||||| | |   ||||| |||||
Sbjct: 1   cgcaagaacgccctcgacatcaacgacttcggcgccaccgtcctcgggcgcgtctccgag 60

                                                  
Query: 212 ctcctcggccgcggcgtcacctgccagctcatcagctcc 250
            ||||||||||||||||||||||||||||| ||||||||
Sbjct: 61  ttcctcggccgcggcgtcacctgccagctcgtcagctcc 99
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>gb|AF465643.1| Zea mays B73 lipoxygenase gene, complete cds
          Length = 5013

 Score =  113 bits (57), Expect = 4e-22
 Identities = 102/117 (87%)
 Strand = Plus / Plus

                                                                       
Query: 146 ctcatgcgcaagaacgcgctcgacttcaacgacttcggcgccaccgtcatggacggcgtc 205
           |||||||||||||||| ||| ||| ||||||||||||||||||||||| | ||| || ||
Sbjct: 218 ctcatgcgcaagaacgtgctggacctcaacgacttcggcgccaccgtcgttgacagcatc 277

                                                                    
Query: 206 accgagctcctcggccgcggcgtcacctgccagctcatcagctccaccaacgtcgac 262
           | |||| ||||||||   || |||||||||||||||||||||||||||  |||||||
Sbjct: 278 agcgagttcctcggcaagggggtcacctgccagctcatcagctccaccctcgtcgac 334



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 293 gcggaggcgaacctggagcagtggct 318
           ||||||||||||||||||||||||||
Sbjct: 945 gcggaggcgaacctggagcagtggct 970
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>gb|U83904.1|HVU83904 Hordeum vulgare lipoxygenase isoenzyme 1 (Lox:Hv1) gene, promoter
            region and partial cds
          Length = 5236

 Score =  111 bits (56), Expect = 2e-21
 Identities = 95/108 (87%)
 Strand = Plus / Plus

                                                                        
Query: 146  ctcatgcgcaagaacgcgctcgacttcaacgacttcggcgccaccgtcatggacggcgtc 205
            |||||||||||||||| ||| ||| |||||||||||||||||||| |||| |||||| ||
Sbjct: 3584 ctcatgcgcaagaacgtgctggacctcaacgacttcggcgccaccatcatcgacggcatc 3643

                                                            
Query: 206  accgagctcctcggccgcggcgtcacctgccagctcatcagctccacc 253
              |||| ||||||||   ||||||||||||||||| ||||||||||||
Sbjct: 3644 ggcgagttcctcggcaagggcgtcacctgccagcttatcagctccacc 3691



 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 46/50 (92%)
 Strand = Plus / Plus

                                                              
Query: 267  acaacggtgggcgcgggaaggtgggcgcggaggcgaacctggagcagtgg 316
            ||||||| || |||||||||||||||||||||||| | ||||||||||||
Sbjct: 4255 acaacggcggtcgcgggaaggtgggcgcggaggcggagctggagcagtgg 4304
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>gb|AF465642.1| Zea mays Golden cross bantam-70 lipoxygenase gene, promoter region
            and partial cds
          Length = 3196

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 64/72 (88%)
 Strand = Plus / Plus

                                                                        
Query: 192  tcatggacggcgtcaccgagctcctcggccgcggcgtcacctgccagctcatcagctcca 251
            ||||||||||| ||  |||| ||||||||||||||||||||||||| ||| |||||||||
Sbjct: 2387 tcatggacggcctcggcgagttcctcggccgcggcgtcacctgccaactcgtcagctcca 2446

                        
Query: 252  ccaacgtcgacc 263
            ||  ||||||||
Sbjct: 2447 ccgtcgtcgacc 2458



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                          
Query: 278  cgcgggaaggtgggcgcggaggcgaacctggagcagtggctcctgc 323
            ||||||||||||||   |||||||| ||||||||||||||| ||||
Sbjct: 2744 cgcgggaaggtgggtcaggaggcgagcctggagcagtggctgctgc 2789
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>gb|AE005807.1| Caulobacter crescentus CB15 section 133 of 359 of the complete genome
          Length = 8803

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 160  cgcgctcgacttcaacgacttcggcg 185
            ||||| ||||||||||||||||||||
Sbjct: 4469 cgcgcacgacttcaacgacttcggcg 4494
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>ref|NM_003028.1| Homo sapiens Src homology 2 domain containing adaptor protein B
           (SHB), mRNA
          Length = 2306

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 105 cggggggcctccggggcgccc 125
           |||||||||||||||||||||
Sbjct: 469 cggggggcctccggggcgccc 449
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>gb|AY596511.1| Helicosporidium sp. ex Simulium jonesii gamma-carbonic anhydrase
           mRNA, partial cds
          Length = 775

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 181 cggcgccaccgtcatggacggcgtcaccg 209
           ||||||||| ||||||||||||| |||||
Sbjct: 400 cggcgccacggtcatggacggcgccaccg 428
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>ref|XM_391393.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG11217.1)
           partial mRNA
          Length = 1107

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 128 cccaagggctccgtcgtcctc 148
           |||||||||||||||||||||
Sbjct: 28  cccaagggctccgtcgtcctc 48
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>emb|X75342.1|HSSHB H.sapiens SHB mRNA
          Length = 2306

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 105 cggggggcctccggggcgccc 125
           |||||||||||||||||||||
Sbjct: 469 cggggggcctccggggcgccc 449
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>gb|AC145811.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0088L13
             map near C50029S, complete sequence
          Length = 129900

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 77    ggcgtcggcggcatcgtgag 96
             ||||||||||||||||||||
Sbjct: 52268 ggcgtcggcggcatcgtgag 52287
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>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 316    gctcctgccgacgaacctgc 335
              ||||||||||||||||||||
Sbjct: 137505 gctcctgccgacgaacctgc 137486
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>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome
          Length = 6397126

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 330    acctgccgttcatcaccaccggcg 353
              ||||||||||||||| ||||||||
Sbjct: 288875 acctgccgttcatcatcaccggcg 288852
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>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome
          Length = 6093698

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 330    acctgccgttcatcaccaccggcg 353
              ||||||||||||||| ||||||||
Sbjct: 153202 acctgccgttcatcatcaccggcg 153225
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>gb|AY316746.1| Rhizobium sp. NGR234 megaplasmid 2 contig 2, complete sequence
          Length = 236455

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 82     cggcggcatcgtgagcgacctgac 105
              ||||||||||| ||||||||||||
Sbjct: 205636 cggcggcatcgagagcgacctgac 205659
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>emb|AL591790.1|SME591790 Sinorhizobium meliloti 1021 complete chromosome; segment 9/12
          Length = 323450

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 82    cggcggcatcgtgagcgacctgac 105
             ||||||||||| ||||||||||||
Sbjct: 80122 cggcggcatcgagagcgacctgac 80099
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>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 210     agctcctcggccgcggcgtc 229
               ||||||||||||||||||||
Sbjct: 1962239 agctcctcggccgcggcgtc 1962220
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>gb|AC124918.5| Rattus norvegicus 4 BAC CH230-4H1 (Children's Hospital Oakland Research
             Institute) complete sequence
          Length = 228052

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 237   agctcatcagctccaccaac 256
             ||||||||||||||||||||
Sbjct: 82121 agctcatcagctccaccaac 82102
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>ref|XM_967239.1| PREDICTED: Tribolium castaneum similar to CG11980-PC, isoform C
           (LOC661050), mRNA
          Length = 1156

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 250 caccaacgtcgaccacaaca 269
           ||||||||||||||||||||
Sbjct: 239 caccaacgtcgaccacaaca 220
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>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 334     gccgttcatcaccaccggcg 353
               ||||||||||||||||||||
Sbjct: 1867059 gccgttcatcaccaccggcg 1867040
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>emb|AL731878.4|CNS08C8I Oryza sativa chromosome 3, . BAC OSJNBb0116P11 of library OSJNBb from
              chromosome 3 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 128559

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 77     ggcgtcggcggcatcgtgag 96
              ||||||||||||||||||||
Sbjct: 103984 ggcgtcggcggcatcgtgag 104003
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>gb|AC079160.5| Homo sapiens BAC clone RP11-176K15 from 4, complete sequence
          Length = 147727

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 303   acctggagcagtggctcctg 322
             ||||||||||||||||||||
Sbjct: 78731 acctggagcagtggctcctg 78750
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>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 180     tcggcgccaccgtcatggacggcg 203
               ||||||||| ||||||||||||||
Sbjct: 2990742 tcggcgccatcgtcatggacggcg 2990719
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 77      ggcgtcggcggcatcgtgagcgac 100
               |||||||||||||||||| |||||
Sbjct: 5079435 ggcgtcggcggcatcgtgcgcgac 5079412
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 77     ggcgtcggcggcatcgtgagcgac 100
              |||||||||||||||||| |||||
Sbjct: 590306 ggcgtcggcggcatcgtgcgcgac 590329



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 150    tgcgcaagaacgcgctcgacttca 173
              ||||||||||| ||||||||||||
Sbjct: 206796 tgcgcaagaacccgctcgacttca 206773
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>dbj|AK109329.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-B01, full
           insert sequence
          Length = 1556

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 77  ggcgtcggcggcatcgtgag 96
           ||||||||||||||||||||
Sbjct: 613 ggcgtcggcggcatcgtgag 594
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>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                               
Query: 196     ggacggcgtcaccgagctcctcggccgcggcg 227
               ||||||||| | |||| |||||||||||||||
Sbjct: 1448865 ggacggcgtgatcgagttcctcggccgcggcg 1448834
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 77     ggcgtcggcggcatcgtgagcgac 100
              |||||||||||||||||| |||||
Sbjct: 657733 ggcgtcggcggcatcgtgcgcgac 657756


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,190,339
Number of Sequences: 3902068
Number of extensions: 2190339
Number of successful extensions: 48890
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 47825
Number of HSP's gapped (non-prelim): 1057
length of query: 381
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 359
effective length of database: 17,147,199,772
effective search space: 6155844718148
effective search space used: 6155844718148
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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