>RM32_DROME (Q9V9Z1) 39S ribosomal protein L32, mitochondrial precursor|
          Length = 195

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +3

Query: 3   VPAAGEPPPVTVAGFSCEDHRPTSSSKKSMSPL 101
           +P  G PP + +AGF   DH P SS + S+  L
Sbjct: 21  LPHGGHPPALALAGFQ-HDHSPKSSQEFSLKQL 52

>IRF6_MOUSE (P97431) Interferon regulatory factor 6 (IRF-6)|
          Length = 467

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 14/47 (29%), Positives = 23/47 (48%)
 Frame = -1

Query: 190 PWGRHAALEDRRRKTPEQIYGQWRQITAKYKGDIDFLDDDVGRWSSQ 50
           PW +HA     +++    I+  W   T KY+  +D  D D  +W +Q
Sbjct: 39  PW-KHATRHSPQQEEENTIFKAWAVETGKYQEGVD--DPDPAKWKAQ 82

>IRF6_HUMAN (O14896) Interferon regulatory factor 6 (IRF-6)|
          Length = 467

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 14/47 (29%), Positives = 23/47 (48%)
 Frame = -1

Query: 190 PWGRHAALEDRRRKTPEQIYGQWRQITAKYKGDIDFLDDDVGRWSSQ 50
           PW +HA     +++    I+  W   T KY+  +D  D D  +W +Q
Sbjct: 39  PW-KHATRHSPQQEEENTIFKAWAVETGKYQEGVD--DPDPAKWKAQ 82

>ICP4_GAHVG (Q02362) Trans-acting transcriptional activator protein ICP4|
           (Immediate-early protein IE175)
          Length = 1415

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = -1

Query: 232 WESPLLPPXRCWVFPWGRH 176
           WE PL PP RCW    G H
Sbjct: 287 WEVPLPPPGRCWFGGLGGH 305

>BAT2_MACMU (Q5TM26) Large proline-rich protein BAT2 (HLA-B-associated|
           transcript 2)
          Length = 2160

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 19/48 (39%), Positives = 23/48 (47%)
 Frame = +1

Query: 127 GRISVLEFYGGDPREQRVSPMERPNSGEEGEGDSPNETRIPLETAAAE 270
           GR S  E   G    Q  S  ERP   +  +G+SPN    P +TA AE
Sbjct: 347 GRDSDEEGAEGHKDSQSASGEERPTEADGKKGNSPNSELPPPKTAWAE 394

>RL44_METTH (O27365) 50S ribosomal protein L44E|
          Length = 92

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 14/30 (46%), Positives = 20/30 (66%), Gaps = 2/30 (6%)
 Frame = -1

Query: 178 HAALEDRRRKTPEQIYG--QWRQITAKYKG 95
           H  LE +RRK  E  +G  Q+R++TA Y+G
Sbjct: 20  HEVLESKRRKASELKWGQRQFRRVTAGYRG 49

>ZBT7A_HUMAN (O95365) Zinc finger and BTB domain-containing protein 7A|
           (Leukemia/lymphoma related factor) (Factor that binds to
           inducer of short transcripts protein 1) (Factor binding
           IST protein 1) (FBI-1) (HIV-1 1st-binding protein 1)
           (TTF-I-interacting
          Length = 584

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = +1

Query: 115 SASTGRISVLEFYGGDPREQRVSPMERPNSGEEGEGDS 228
           + + G  + L+FYG  P      P ERP +G+  EGDS
Sbjct: 208 AVAAGDCNGLDFYGPGP------PAERPPTGDGDEGDS 239

>CHST7_HUMAN (Q9NS84) Carbohydrate sulfotransferase 7 (EC 2.8.2.17) (EC 2.8.2.-)|
           (Chondroitin 6-sulfotransferase 2) (C6ST-2)
           (N-acetylglucosamine 6-O-sulfotransferase 1)
           (GlcNAc6ST-4)
           (Galactose/N-acetylglucosamine/N-acetylglucosamine
           6-O-sulfotransferase
          Length = 486

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +1

Query: 196 PNSGEEGEGDSPNETRIPLETAA 264
           P SGEEG+ + P E   PLE  A
Sbjct: 460 PRSGEEGDAEQPREGETPLEMDA 482

>CH60_LEIXX (Q6ADK2) 60 kDa chaperonin (Protein Cpn60) (groEL protein)|
          Length = 539

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 17/41 (41%), Positives = 22/41 (53%)
 Frame = -1

Query: 145 PEQIYGQWRQITAKYKGDIDFLDDDVGRWSSQENPATVTGG 23
           P+QI G+  QI    +G+ID  D D  R   QE  A + GG
Sbjct: 337 PDQIAGRVAQI----RGEIDNSDSDYDREKLQERLAKLAGG 373

>SEM6B_HUMAN (Q9H3T3) Semaphorin-6B precursor (Semaphorin Z) (Sema Z)|
          Length = 888

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 14/41 (34%), Positives = 18/41 (43%)
 Frame = +3

Query: 150 LRRRSSRAACLPHGKTQQXXXXXXXLSQRDEDPAGDGGGRG 272
           L RR  + A L HG  +          +R + P G GGG G
Sbjct: 630 LARRKDKEAILAHGAGEAVLSVSRLGERRAQGPGGRGGGGG 670

>BEGIN_RAT (O88881) Brain-enriched guanylate kinase-associated protein|
          Length = 611

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 20/76 (26%), Positives = 29/76 (38%)
 Frame = -1

Query: 229 ESPLLPPXRCWVFPWGRHAALEDRRRKTPEQIYGQWRQITAKYKGDIDFLDDDVGRWSSQ 50
           +  L+PP       W   A     R    E I GQWR ++ +  G   +     GR +S 
Sbjct: 404 QQALMPPNL-----WSLRAKPSGNRLAAREDIRGQWRPLSVEDVGAYSYQAGAAGRAASP 458

Query: 49  ENPATVTGGGSPAAGT 2
            N +    GG    G+
Sbjct: 459 CNFSERFYGGGGGGGS 474

>ZBT7A_MOUSE (O88939) Zinc finger and BTB domain-containing protein 7A|
           (Leukemia/lymphoma-related factor)
          Length = 565

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +1

Query: 115 SASTGRISVLEFYGGDPREQRVSPMERPNSGEEGEGDS 228
           + + G  + L+FYG  P      P +RP +G+  EGDS
Sbjct: 202 AVAAGDCNGLDFYGPGP------PADRPPAGDGDEGDS 233


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.315    0.135    0.398 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,036,060
Number of Sequences: 219361
Number of extensions: 830051
Number of successful extensions: 2152
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2085
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2151
length of database: 80,573,946
effective HSP length: 66
effective length of database: 66,096,120
effective search space used: 1586306880
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)