ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bastl12b07 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK071334.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023090L01, full insert sequence Length = 3709 Score = 285 bits (144), Expect = 6e-74 Identities = 207/228 (90%) Strand = Plus / Plus Query: 167 gtcgcggctggacaaggagaagtcggtgaacgtccgggtccttctctgctgcaggccgtt 226 |||||||| |||||||||||||||||||||||||| |||||| ||| ||||||||||||| Sbjct: 54 gtcgcggcaggacaaggagaagtcggtgaacgtccaggtcctcctccgctgcaggccgtt 113 Query: 227 cagcgacgacgaactccggagcaacgcgccgcaggtggtcacctccaacgactaccagcg 286 |||||||||||| |||| ||||||||||| ||||| |||||| ||||||||||||||| Sbjct: 114 cagcgacgacgaggtccgcagcaacgcgccccaggtcatcacctgcaacgactaccagcg 173 Query: 287 ggaggtcgccgtcacacagaccatcgccgggaagcagatcgacagggtcttcacgttcga 346 ||||||||||||||| |||||||||||||| |||||||||||| | |||||||| ||||| Sbjct: 174 ggaggtcgccgtcacgcagaccatcgccggcaagcagatcgaccgtgtcttcaccttcga 233 Query: 347 caaggtttttggcccaacagctaggcagagagacttgtatgatcaagc 394 |||||| |||||||| ||||| | |||||||||||||||||| ||||| Sbjct: 234 caaggtgtttggcccgacagcgaagcagagagacttgtatgaccaagc 281
>gb|AF272755.1|AF272755 Zea mays kinesin heavy chain (KIN8) mRNA, partial cds Length = 3514 Score = 202 bits (102), Expect = 7e-49 Identities = 198/230 (86%) Strand = Plus / Plus Query: 177 gacaaggagaagtcggtgaacgtccgggtccttctctgctgcaggccgttcagcgacgac 236 ||||||||||||||||||||||| | ||| || ||| |||||||||| |||||||| || Sbjct: 147 gacaaggagaagtcggtgaacgtacaggttctcctccgctgcaggcccttcagcgatgat 206 Query: 237 gaactccggagcaacgcgccgcaggtggtcacctccaacgactaccagcgggaggtcgcc 296 || ||||||| ||||||||||||||| |||||| |||||| |||||||||||||||||| Sbjct: 207 gagctccggaacaacgcgccgcaggtcatcacctgcaacgattaccagcgggaggtcgcc 266 Query: 297 gtcacacagaccatcgccgggaagcagatcgacagggtcttcacgttcgacaaggttttt 356 ||||| |||| |||||||||||||||| |||| |||||| | | ||||||||||||||| Sbjct: 267 gtcacgcagaacatcgccgggaagcagttcgatcgggtctacgccttcgacaaggttttt 326 Query: 357 ggcccaacagctaggcagagagacttgtatgatcaagccatcattcctat 406 || || ||||| | ||||| || |||||||| || ||||| |||||||| Sbjct: 327 ggaccgacagcaaagcagaaggaattgtatgaccaggccattattcctat 376
>gb|AF272752.1|AF272752 Zea mays kinesin heavy chain (KIN4) mRNA, partial cds Length = 3385 Score = 202 bits (102), Expect = 7e-49 Identities = 198/230 (86%) Strand = Plus / Plus Query: 177 gacaaggagaagtcggtgaacgtccgggtccttctctgctgcaggccgttcagcgacgac 236 ||||||||||||||||||||||| | ||| || ||| |||||||||| |||||||| || Sbjct: 136 gacaaggagaagtcggtgaacgtacaggttctcctccgctgcaggcccttcagcgatgat 195 Query: 237 gaactccggagcaacgcgccgcaggtggtcacctccaacgactaccagcgggaggtcgcc 296 || ||||||| ||||||||||||||| |||||| |||||| |||||||||||||||||| Sbjct: 196 gagctccggaacaacgcgccgcaggtcatcacctgcaacgattaccagcgggaggtcgcc 255 Query: 297 gtcacacagaccatcgccgggaagcagatcgacagggtcttcacgttcgacaaggttttt 356 ||||| |||| |||||||||||||||| |||| |||||| | | ||||||||||||||| Sbjct: 256 gtcacgcagaacatcgccgggaagcagttcgatcgggtctacgccttcgacaaggttttt 315 Query: 357 ggcccaacagctaggcagagagacttgtatgatcaagccatcattcctat 406 || || ||||| | ||||| || |||||||| || ||||| |||||||| Sbjct: 316 ggaccgacagcaaagcagaaggaattgtatgaccaggccattattcctat 365
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 174 bits (88), Expect = 1e-40 Identities = 124/136 (91%) Strand = Plus / Minus Query: 217 gcaggccgttcagcgacgacgaactccggagcaacgcgccgcaggtggtcacctccaacg 276 |||||||||||||||||||||| |||| ||||||||||| ||||| |||||| ||||| Sbjct: 27941403 gcaggccgttcagcgacgacgaggtccgcagcaacgcgccccaggtcatcacctgcaacg 27941344 Query: 277 actaccagcgggaggtcgccgtcacacagaccatcgccgggaagcagatcgacagggtct 336 ||||||||||||||||||||||||| |||||||||||||| |||||||||||| | |||| Sbjct: 27941343 actaccagcgggaggtcgccgtcacgcagaccatcgccggcaagcagatcgaccgtgtct 27941284 Query: 337 tcacgttcgacaaggt 352 |||| ||||||||||| Sbjct: 27941283 tcaccttcgacaaggt 27941268 Score = 77.8 bits (39), Expect = 3e-11 Identities = 51/55 (92%) Strand = Plus / Minus Query: 167 gtcgcggctggacaaggagaagtcggtgaacgtccgggtccttctctgctgcagg 221 |||||||| |||||||||||||||||||||||||| |||||| ||| |||||||| Sbjct: 27941524 gtcgcggcaggacaaggagaagtcggtgaacgtccaggtcctcctccgctgcagg 27941470 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Minus Query: 349 aggtttttggcccaacagctaggcagagagacttgtatgatcaagc 394 |||| |||||||| ||||| | |||||||||||||||||| ||||| Sbjct: 27940870 aggtgtttggcccgacagcgaagcagagagacttgtatgaccaagc 27940825
>dbj|AP005524.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0562A06 Length = 154198 Score = 174 bits (88), Expect = 1e-40 Identities = 124/136 (91%) Strand = Plus / Minus Query: 217 gcaggccgttcagcgacgacgaactccggagcaacgcgccgcaggtggtcacctccaacg 276 |||||||||||||||||||||| |||| ||||||||||| ||||| |||||| ||||| Sbjct: 18895 gcaggccgttcagcgacgacgaggtccgcagcaacgcgccccaggtcatcacctgcaacg 18836 Query: 277 actaccagcgggaggtcgccgtcacacagaccatcgccgggaagcagatcgacagggtct 336 ||||||||||||||||||||||||| |||||||||||||| |||||||||||| | |||| Sbjct: 18835 actaccagcgggaggtcgccgtcacgcagaccatcgccggcaagcagatcgaccgtgtct 18776 Query: 337 tcacgttcgacaaggt 352 |||| ||||||||||| Sbjct: 18775 tcaccttcgacaaggt 18760 Score = 77.8 bits (39), Expect = 3e-11 Identities = 51/55 (92%) Strand = Plus / Minus Query: 167 gtcgcggctggacaaggagaagtcggtgaacgtccgggtccttctctgctgcagg 221 |||||||| |||||||||||||||||||||||||| |||||| ||| |||||||| Sbjct: 19016 gtcgcggcaggacaaggagaagtcggtgaacgtccaggtcctcctccgctgcagg 18962 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Minus Query: 349 aggtttttggcccaacagctaggcagagagacttgtatgatcaagc 394 |||| |||||||| ||||| | |||||||||||||||||| ||||| Sbjct: 18362 aggtgtttggcccgacagcgaagcagagagacttgtatgaccaagc 18317
>gb|DQ430102.1| Sorghum propinquum locus pSB1755 genomic sequence Length = 373 Score = 60.0 bits (30), Expect = 6e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 349 aggtttttggcccaacagctaggcagagagacttgtatgatcaagccatcattcctat 406 |||||||||| |||||||| | ||||| ||||||||||| || |||||||||||||| Sbjct: 99 aggtttttggaccaacagcaaagcagaaggacttgtatgaccaggccatcattcctat 156
>gb|DQ430101.1| Sorghum bicolor voucher PI585454 locus pSB1755 genomic sequence Length = 373 Score = 60.0 bits (30), Expect = 6e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 349 aggtttttggcccaacagctaggcagagagacttgtatgatcaagccatcattcctat 406 |||||||||| |||||||| | ||||| ||||||||||| || |||||||||||||| Sbjct: 99 aggtttttggaccaacagcaaagcagaaggacttgtatgaccaggccatcattcctat 156
>gb|DQ430100.1| Sorghum bicolor voucher PI267539 locus pSB1755 genomic sequence Length = 373 Score = 60.0 bits (30), Expect = 6e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 349 aggtttttggcccaacagctaggcagagagacttgtatgatcaagccatcattcctat 406 |||||||||| |||||||| | ||||| ||||||||||| || |||||||||||||| Sbjct: 99 aggtttttggaccaacagcaaagcagaaggacttgtatgaccaggccatcattcctat 156
>gb|DQ430099.1| Sorghum bicolor voucher PI267408 locus pSB1755 genomic sequence Length = 373 Score = 60.0 bits (30), Expect = 6e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 349 aggtttttggcccaacagctaggcagagagacttgtatgatcaagccatcattcctat 406 |||||||||| |||||||| | ||||| ||||||||||| || |||||||||||||| Sbjct: 99 aggtttttggaccaacagcaaagcagaaggacttgtatgaccaggccatcattcctat 156
>gb|DQ430098.1| Sorghum bicolor voucher PI221607 locus pSB1755 genomic sequence Length = 373 Score = 60.0 bits (30), Expect = 6e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 349 aggtttttggcccaacagctaggcagagagacttgtatgatcaagccatcattcctat 406 |||||||||| |||||||| | ||||| ||||||||||| || |||||||||||||| Sbjct: 99 aggtttttggaccaacagcaaagcagaaggacttgtatgaccaggccatcattcctat 156
>gb|DQ430097.1| Sorghum bicolor voucher PI152702 locus pSB1755 genomic sequence Length = 373 Score = 60.0 bits (30), Expect = 6e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 349 aggtttttggcccaacagctaggcagagagacttgtatgatcaagccatcattcctat 406 |||||||||| |||||||| | ||||| ||||||||||| || |||||||||||||| Sbjct: 99 aggtttttggaccaacagcaaagcagaaggacttgtatgaccaggccatcattcctat 156
>gb|DQ430096.1| Sorghum bicolor voucher NSL92371 locus pSB1755 genomic sequence Length = 373 Score = 60.0 bits (30), Expect = 6e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 349 aggtttttggcccaacagctaggcagagagacttgtatgatcaagccatcattcctat 406 |||||||||| |||||||| | ||||| ||||||||||| || |||||||||||||| Sbjct: 99 aggtttttggaccaacagcaaagcagaaggacttgtatgaccaggccatcattcctat 156
>gb|DQ430095.1| Sorghum bicolor voucher NSL87902b locus pSB1755 genomic sequence Length = 373 Score = 60.0 bits (30), Expect = 6e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 349 aggtttttggcccaacagctaggcagagagacttgtatgatcaagccatcattcctat 406 |||||||||| |||||||| | ||||| ||||||||||| || |||||||||||||| Sbjct: 99 aggtttttggaccaacagcaaagcagaaggacttgtatgaccaggccatcattcctat 156
>gb|DQ430094.1| Sorghum bicolor voucher NSL87902a locus pSB1755 genomic sequence Length = 373 Score = 60.0 bits (30), Expect = 6e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 349 aggtttttggcccaacagctaggcagagagacttgtatgatcaagccatcattcctat 406 |||||||||| |||||||| | ||||| ||||||||||| || |||||||||||||| Sbjct: 99 aggtttttggaccaacagcaaagcagaaggacttgtatgaccaggccatcattcctat 156
>gb|DQ430093.1| Sorghum bicolor voucher NSL87666 locus pSB1755 genomic sequence Length = 373 Score = 60.0 bits (30), Expect = 6e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 349 aggtttttggcccaacagctaggcagagagacttgtatgatcaagccatcattcctat 406 |||||||||| |||||||| | ||||| ||||||||||| || |||||||||||||| Sbjct: 99 aggtttttggaccaacagcaaagcagaaggacttgtatgaccaggccatcattcctat 156
>gb|DQ430092.1| Sorghum bicolor voucher NSL77217 locus pSB1755 genomic sequence Length = 373 Score = 60.0 bits (30), Expect = 6e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 349 aggtttttggcccaacagctaggcagagagacttgtatgatcaagccatcattcctat 406 |||||||||| |||||||| | ||||| ||||||||||| || |||||||||||||| Sbjct: 99 aggtttttggaccaacagcaaagcagaaggacttgtatgaccaggccatcattcctat 156
>gb|DQ430091.1| Sorghum bicolor voucher NSL77034 locus pSB1755 genomic sequence Length = 373 Score = 60.0 bits (30), Expect = 6e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 349 aggtttttggcccaacagctaggcagagagacttgtatgatcaagccatcattcctat 406 |||||||||| |||||||| | ||||| ||||||||||| || |||||||||||||| Sbjct: 99 aggtttttggaccaacagcaaagcagaaggacttgtatgaccaggccatcattcctat 156
>gb|DQ430090.1| Sorghum bicolor voucher NSL56174 locus pSB1755 genomic sequence Length = 373 Score = 60.0 bits (30), Expect = 6e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 349 aggtttttggcccaacagctaggcagagagacttgtatgatcaagccatcattcctat 406 |||||||||| |||||||| | ||||| ||||||||||| || |||||||||||||| Sbjct: 99 aggtttttggaccaacagcaaagcagaaggacttgtatgaccaggccatcattcctat 156
>gb|DQ430089.1| Sorghum bicolor voucher NSL56003 locus pSB1755 genomic sequence Length = 373 Score = 60.0 bits (30), Expect = 6e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 349 aggtttttggcccaacagctaggcagagagacttgtatgatcaagccatcattcctat 406 |||||||||| |||||||| | ||||| ||||||||||| || |||||||||||||| Sbjct: 99 aggtttttggaccaacagcaaagcagaaggacttgtatgaccaggccatcattcctat 156
>gb|DQ430088.1| Sorghum bicolor voucher NSL55243 locus pSB1755 genomic sequence Length = 373 Score = 60.0 bits (30), Expect = 6e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 349 aggtttttggcccaacagctaggcagagagacttgtatgatcaagccatcattcctat 406 |||||||||| |||||||| | ||||| ||||||||||| || |||||||||||||| Sbjct: 99 aggtttttggaccaacagcaaagcagaaggacttgtatgaccaggccatcattcctat 156
>gb|DQ430087.1| Sorghum bicolor voucher NSL51365 locus pSB1755 genomic sequence Length = 373 Score = 60.0 bits (30), Expect = 6e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 349 aggtttttggcccaacagctaggcagagagacttgtatgatcaagccatcattcctat 406 |||||||||| |||||||| | ||||| ||||||||||| || |||||||||||||| Sbjct: 99 aggtttttggaccaacagcaaagcagaaggacttgtatgaccaggccatcattcctat 156
>gb|DQ430086.1| Sorghum bicolor voucher NSL51030 locus pSB1755 genomic sequence Length = 373 Score = 60.0 bits (30), Expect = 6e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 349 aggtttttggcccaacagctaggcagagagacttgtatgatcaagccatcattcctat 406 |||||||||| |||||||| | ||||| ||||||||||| || |||||||||||||| Sbjct: 99 aggtttttggaccaacagcaaagcagaaggacttgtatgaccaggccatcattcctat 156
>gb|DQ430085.1| Sorghum bicolor voucher NSL50875 locus pSB1755 genomic sequence Length = 373 Score = 60.0 bits (30), Expect = 6e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 349 aggtttttggcccaacagctaggcagagagacttgtatgatcaagccatcattcctat 406 |||||||||| |||||||| | ||||| ||||||||||| || |||||||||||||| Sbjct: 99 aggtttttggaccaacagcaaagcagaaggacttgtatgaccaggccatcattcctat 156
>gb|DQ430084.1| Sorghum bicolor voucher BTx623 locus pSB1755 genomic sequence Length = 373 Score = 60.0 bits (30), Expect = 6e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 349 aggtttttggcccaacagctaggcagagagacttgtatgatcaagccatcattcctat 406 |||||||||| |||||||| | ||||| ||||||||||| || |||||||||||||| Sbjct: 99 aggtttttggaccaacagcaaagcagaaggacttgtatgaccaggccatcattcctat 156
>ref|NM_128423.1| Arabidopsis thaliana ATP binding / microtubule motor AT2G28620 mRNA, complete cds Length = 3231 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 345 gacaaggtttttggcccaaca 365 ||||||||||||||||||||| Sbjct: 298 gacaaggtttttggcccaaca 318
>gb|DP000012.1| Macropus eugenii target 1 genomic scaffold Length = 1996640 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 cacttccccaaaattttgaattcc 39 ||||||| |||||||||||||||| Sbjct: 133694 cacttccacaaaattttgaattcc 133717
>ref|XM_001004420.1| PREDICTED: Mus musculus ankyrin repeat domain 11, transcript variant 4 (Ankrd11), mRNA Length = 8387 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 gggtccttctctgctgcagg 221 |||||||||||||||||||| Sbjct: 6646 gggtccttctctgctgcagg 6627
>ref|XM_001004426.1| PREDICTED: Mus musculus ankyrin repeat domain 11, transcript variant 5 (Ankrd11), mRNA Length = 9837 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 gggtccttctctgctgcagg 221 |||||||||||||||||||| Sbjct: 8096 gggtccttctctgctgcagg 8077
>ref|XM_001004428.1| PREDICTED: Mus musculus ankyrin repeat domain 11, transcript variant 7 (Ankrd11), mRNA Length = 17059 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 gggtccttctctgctgcagg 221 |||||||||||||||||||| Sbjct: 15318 gggtccttctctgctgcagg 15299
>ref|XM_001004417.1| PREDICTED: Mus musculus ankyrin repeat domain 11, transcript variant 3 (Ankrd11), mRNA Length = 8997 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 gggtccttctctgctgcagg 221 |||||||||||||||||||| Sbjct: 7256 gggtccttctctgctgcagg 7237
>ref|XM_001004427.1| PREDICTED: Mus musculus ankyrin repeat domain 11, transcript variant 6 (Ankrd11), mRNA Length = 8961 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 gggtccttctctgctgcagg 221 |||||||||||||||||||| Sbjct: 7220 gggtccttctctgctgcagg 7201
>ref|XM_917591.2| PREDICTED: Mus musculus ankyrin repeat domain 11, transcript variant 11 (Ankrd11), mRNA Length = 8885 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 gggtccttctctgctgcagg 221 |||||||||||||||||||| Sbjct: 7145 gggtccttctctgctgcagg 7126
>ref|XM_902609.2| PREDICTED: Mus musculus ankyrin repeat domain 11, transcript variant 4 (Ankrd11), mRNA Length = 8386 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 gggtccttctctgctgcagg 221 |||||||||||||||||||| Sbjct: 6646 gggtccttctctgctgcagg 6627
>ref|XM_902607.2| PREDICTED: Mus musculus ankyrin repeat domain 11, transcript variant 3 (Ankrd11), mRNA Length = 9836 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 gggtccttctctgctgcagg 221 |||||||||||||||||||| Sbjct: 8096 gggtccttctctgctgcagg 8077
>ref|XM_902605.2| PREDICTED: Mus musculus ankyrin repeat domain 11, transcript variant 2 (Ankrd11), mRNA Length = 17058 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 gggtccttctctgctgcagg 221 |||||||||||||||||||| Sbjct: 15318 gggtccttctctgctgcagg 15299
>ref|XM_902618.2| PREDICTED: Mus musculus ankyrin repeat domain 11, transcript variant 9 (Ankrd11), mRNA Length = 8996 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 gggtccttctctgctgcagg 221 |||||||||||||||||||| Sbjct: 7256 gggtccttctctgctgcagg 7237
>ref|XM_134514.6| PREDICTED: Mus musculus ankyrin repeat domain 11, transcript variant 1 (Ankrd11), mRNA Length = 9197 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 gggtccttctctgctgcagg 221 |||||||||||||||||||| Sbjct: 7457 gggtccttctctgctgcagg 7438
>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome Length = 3665893 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 332 ggtcttcacgttcgacaaggtttt 355 |||||||||||||||||| ||||| Sbjct: 3063781 ggtcttcacgttcgacaatgtttt 3063758
>gb|BC059876.1| Mus musculus ankyrin repeat domain 11, mRNA (cDNA clone IMAGE:6810694), partial cds Length = 3131 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 gggtccttctctgctgcagg 221 |||||||||||||||||||| Sbjct: 1393 gggtccttctctgctgcagg 1374
>gb|AC008349.2|AC008349 Drosophila melanogaster, chromosome 2R, region 58E-58E, BAC clone BACR01E01, complete sequence Length = 173373 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 aagccaccgccccgctccac 80 |||||||||||||||||||| Sbjct: 88885 aagccaccgccccgctccac 88866
>gb|AC145409.3| Macropus eugenii clone ME_KBa-528O13, complete sequence Length = 140426 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 cacttccccaaaattttgaattcc 39 ||||||| |||||||||||||||| Sbjct: 133694 cacttccacaaaattttgaattcc 133717
>gb|AE003457.4| Drosophila melanogaster chromosome 2R, section 65 of 73 of the complete sequence Length = 307324 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 aagccaccgccccgctccac 80 |||||||||||||||||||| Sbjct: 246829 aagccaccgccccgctccac 246810
>gb|DQ176266.1| Cataulacus sp. BLF m1 voucher CASENT0053726-D01 cytochrome oxidase subunit 1 (COI) gene, partial cds; mitochondrial Length = 656 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 gaaagtttccgaatccccca 103 |||||||||||||||||||| Sbjct: 195 gaaagtttccgaatccccca 176
>gb|AC132287.3| Mus musculus BAC clone RP24-302M13 from 8, complete sequence Length = 195405 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 202 gggtccttctctgctgcagg 221 |||||||||||||||||||| Sbjct: 67554 gggtccttctctgctgcagg 67573 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,550,652 Number of Sequences: 3902068 Number of extensions: 2550652 Number of successful extensions: 43289 Number of sequences better than 10.0: 45 Number of HSP's better than 10.0 without gapping: 45 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 43198 Number of HSP's gapped (non-prelim): 91 length of query: 417 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 395 effective length of database: 17,147,199,772 effective search space: 6773143909940 effective search space used: 6773143909940 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
