Clone Name | bastl12b06 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | NIP80_YEAST (P33420) Protein NIP80 (Protein NIP100) | 30 | 2.0 | 2 | MIAA_DESPS (Q6ALW6) tRNA delta(2)-isopentenylpyrophosphate trans... | 28 | 7.8 |
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>NIP80_YEAST (P33420) Protein NIP80 (Protein NIP100)| Length = 868 Score = 29.6 bits (65), Expect = 2.0 Identities = 13/30 (43%), Positives = 20/30 (66%) Frame = +2 Query: 170 KINEDWPEKDATVVHKNKVRKKKLSDLGSQ 259 K+ ED E++ ++ +N V KK+SDLG Q Sbjct: 219 KVQEDLLEENTQLLEENAVLSKKISDLGLQ 248
>MIAA_DESPS (Q6ALW6) tRNA delta(2)-isopentenylpyrophosphate transferase (EC| 2.5.1.8) (IPP transferase) (Isopentenyl-diphosphate:tRNA isopentenyltransferase) (IPTase) (IPPT) Length = 314 Score = 27.7 bits (60), Expect = 7.8 Identities = 14/40 (35%), Positives = 19/40 (47%) Frame = +2 Query: 158 KRYAKINEDWPEKDATVVHKNKVRKKKLSDLGSQWSXDEL 277 +RYAK W KD + K K ++ D QW D+L Sbjct: 271 RRYAKRQYTWFNKDEDLHWYQKESKAEIVDRVGQWLEDQL 310 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 34,539,192 Number of Sequences: 219361 Number of extensions: 495562 Number of successful extensions: 1424 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 1411 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1423 length of database: 80,573,946 effective HSP length: 73 effective length of database: 64,560,593 effective search space used: 1549454232 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)