Clone Name | bastl12b05 |
---|---|
Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | ZN219_HUMAN (Q9P2Y4) Zinc finger protein 219 | 32 | 0.91 | 2 | GLT5_WHEAT (P10388) Glutenin, high molecular weight subunit DX5 ... | 28 | 7.7 | 3 | GLT4_WHEAT (P08489) Glutenin, high molecular weight subunit PW21... | 28 | 7.7 | 4 | GLT0_WHEAT (P10387) Glutenin, high molecular weight subunit DY10... | 28 | 7.7 |
---|
>ZN219_HUMAN (Q9P2Y4) Zinc finger protein 219| Length = 722 Score = 31.6 bits (70), Expect = 0.91 Identities = 14/31 (45%), Positives = 17/31 (54%) Frame = -1 Query: 176 PRPPCAGRQTGQEQQPADPGVGEENGGGERA 84 PRPP +G G ++PA PG NG G A Sbjct: 594 PRPPSSGAGPGSRRKPASPGRTLRNGRGGEA 624
>GLT5_WHEAT (P10388) Glutenin, high molecular weight subunit DX5 precursor| Length = 839 Score = 28.5 bits (62), Expect = 7.7 Identities = 12/27 (44%), Positives = 17/27 (62%) Frame = -1 Query: 167 PCAGRQTGQEQQPADPGVGEENGGGER 87 P G+Q GQ QQ PG G++ G G++ Sbjct: 237 PGQGQQPGQGQQGQQPGQGQQPGQGQQ 263 Score = 28.5 bits (62), Expect = 7.7 Identities = 13/33 (39%), Positives = 19/33 (57%) Frame = -1 Query: 185 LRWPRPPCAGRQTGQEQQPADPGVGEENGGGER 87 L+ P G+Q GQ QQ PG G++ G G++ Sbjct: 216 LQQPAQGQQGQQPGQAQQGQQPGQGQQPGQGQQ 248
>GLT4_WHEAT (P08489) Glutenin, high molecular weight subunit PW212 precursor| Length = 838 Score = 28.5 bits (62), Expect = 7.7 Identities = 12/27 (44%), Positives = 17/27 (62%) Frame = -1 Query: 167 PCAGRQTGQEQQPADPGVGEENGGGER 87 P G+Q GQ QQ PG G++ G G++ Sbjct: 242 PGQGQQPGQGQQGQQPGQGQQPGQGQQ 268
>GLT0_WHEAT (P10387) Glutenin, high molecular weight subunit DY10 precursor| Length = 648 Score = 28.5 bits (62), Expect = 7.7 Identities = 11/24 (45%), Positives = 16/24 (66%) Frame = -1 Query: 158 GRQTGQEQQPADPGVGEENGGGER 87 G+QTGQ Q PG G++ G G++ Sbjct: 380 GQQTGQPGQKQQPGQGQQTGQGQQ 403 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 26,446,317 Number of Sequences: 219361 Number of extensions: 275699 Number of successful extensions: 1000 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 931 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 999 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2628831825 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)