ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl12b05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ZN219_HUMAN (Q9P2Y4) Zinc finger protein 219 32 0.91
2GLT5_WHEAT (P10388) Glutenin, high molecular weight subunit DX5 ... 28 7.7
3GLT4_WHEAT (P08489) Glutenin, high molecular weight subunit PW21... 28 7.7
4GLT0_WHEAT (P10387) Glutenin, high molecular weight subunit DY10... 28 7.7

>ZN219_HUMAN (Q9P2Y4) Zinc finger protein 219|
          Length = 722

 Score = 31.6 bits (70), Expect = 0.91
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = -1

Query: 176 PRPPCAGRQTGQEQQPADPGVGEENGGGERA 84
           PRPP +G   G  ++PA PG    NG G  A
Sbjct: 594 PRPPSSGAGPGSRRKPASPGRTLRNGRGGEA 624



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>GLT5_WHEAT (P10388) Glutenin, high molecular weight subunit DX5 precursor|
          Length = 839

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -1

Query: 167 PCAGRQTGQEQQPADPGVGEENGGGER 87
           P  G+Q GQ QQ   PG G++ G G++
Sbjct: 237 PGQGQQPGQGQQGQQPGQGQQPGQGQQ 263



 Score = 28.5 bits (62), Expect = 7.7
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -1

Query: 185 LRWPRPPCAGRQTGQEQQPADPGVGEENGGGER 87
           L+ P     G+Q GQ QQ   PG G++ G G++
Sbjct: 216 LQQPAQGQQGQQPGQAQQGQQPGQGQQPGQGQQ 248



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>GLT4_WHEAT (P08489) Glutenin, high molecular weight subunit PW212 precursor|
          Length = 838

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -1

Query: 167 PCAGRQTGQEQQPADPGVGEENGGGER 87
           P  G+Q GQ QQ   PG G++ G G++
Sbjct: 242 PGQGQQPGQGQQGQQPGQGQQPGQGQQ 268



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>GLT0_WHEAT (P10387) Glutenin, high molecular weight subunit DY10 precursor|
          Length = 648

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -1

Query: 158 GRQTGQEQQPADPGVGEENGGGER 87
           G+QTGQ  Q   PG G++ G G++
Sbjct: 380 GQQTGQPGQKQQPGQGQQTGQGQQ 403


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,446,317
Number of Sequences: 219361
Number of extensions: 275699
Number of successful extensions: 1000
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 931
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 999
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2628831825
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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