ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl12b05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.38
2dbj|AP004761.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.38
3dbj|AP004708.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.38
4gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 42 1.5
5emb|AL023913.6|HS1068F16 Human DNA sequence from clone RP5-1068F... 42 1.5
6emb|AL671978.2| Mouse DNA sequence from clone RP23-443E19 on chr... 42 1.5
7gb|AC150430.3| Branchiostoma floridae clone CH302-99K22, complet... 40 5.9
8ref|XM_512411.1| PREDICTED: Pan troglodytes transportin 2 (impor... 40 5.9
9gb|AC121303.24| Mus musculus chromosome 8, clone RP23-335A5, com... 40 5.9
10ref|NM_013433.3| Homo sapiens transportin 2 (importin 3, karyoph... 40 5.9
11gb|BC072420.1| Homo sapiens transportin 2 (importin 3, karyopher... 40 5.9
12ref|XM_580736.2| PREDICTED: Bos taurus similar to transportin 2 ... 40 5.9
13ref|XM_866623.1| PREDICTED: Bos taurus similar to transportin 2 ... 40 5.9
14ref|XM_878775.1| PREDICTED: Bos taurus similar to transportin 2 ... 40 5.9
15gb|AC125151.4| Mus musculus BAC clone RP24-355K8 from chromosome... 40 5.9
16gb|AC140233.3| Mus musculus BAC clone RP23-282N19 from chromosom... 40 5.9
17ref|XM_862403.1| PREDICTED: Canis familiaris similar to transpor... 40 5.9
18ref|XM_542046.2| PREDICTED: Canis familiaris similar to transpor... 40 5.9
19ref|XM_862384.1| PREDICTED: Canis familiaris similar to transpor... 40 5.9
20ref|XM_862372.1| PREDICTED: Canis familiaris similar to transpor... 40 5.9
21gb|AC123867.4| Mus musculus BAC clone RP23-127O13 from chromosom... 40 5.9
22gb|AC125203.3| Mus musculus BAC clone RP23-233M21 from 19, compl... 40 5.9
23gb|BC063679.1| Homo sapiens cDNA clone IMAGE:4358892, **** WARNI... 40 5.9
24gb|BC018314.1| Homo sapiens transportin 2 (importin 3, karyopher... 40 5.9
25gb|AC021074.15| Homo sapiens 3 BAC RP11-372E1 (Roswell Park Canc... 40 5.9
26emb|AL806526.4| Mouse DNA sequence from clone RP23-123F24 on chr... 40 5.9
27dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, compl... 40 5.9
28dbj|AK056183.1| Homo sapiens cDNA FLJ31621 fis, clone NT2RI20032... 40 5.9
29gb|AC011586.9| Homo sapiens, clone RP11-13N12, complete sequence 40 5.9
30gb|AC009549.6| Homo sapiens chromosome 11, clone RP11-359E10, co... 40 5.9
31ref|XM_684776.1| PREDICTED: Danio rerio similar to Ca2+-dependen... 40 5.9
32gb|AC018761.6| Homo sapiens chromosome 19 clone CTD-2659N19, com... 40 5.9
33emb|AL732624.6| Mouse DNA sequence from clone RP23-118D1 on chro... 40 5.9
34gb|AC012169.8|AC012169 Homo sapiens chromosome 15 clone RP11-522... 40 5.9
35dbj|AK021359.1| Mus musculus 10 days lactation, adult female mam... 40 5.9
36dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
37dbj|AB210011.1| Homo sapiens mRNA for TNPO2 variant protein, par... 40 5.9
38dbj|AP000057.1| Homo sapiens genomic DNA, chromosome 21q22.1, se... 40 5.9
39gb|AC003662.3| Homo sapiens chromosome 17, clone CTB-104N19, com... 40 5.9
40gb|AC008496.6| Homo sapiens chromosome 5 clone CTC-431G16, compl... 40 5.9
41dbj|AP002842.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
42dbj|AP006751.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
43dbj|BS000192.1| Pan troglodytes chromosome 22 clone:PTB-125M11, ... 40 5.9
44dbj|AK121897.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.9
45dbj|AK109515.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.9
46dbj|AP001721.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 5.9
47dbj|AP000330.3| Homo sapiens genomic DNA, chromosome 21 clone:RP... 40 5.9
48dbj|AP005621.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
49emb|AL935208.8| Zebrafish DNA sequence from clone CH211-241N17, ... 40 5.9
50gb|AY998846.1| Lates calcarifer clone Lca52 microsatellite sequence 40 5.9
51gb|AC004063.1|AC004063 Homo sapiens chromosome 4 clone B32I8, co... 40 5.9
52gb|AF019039.1|AF019039 Homo sapiens transportin2 mRNA, complete cds 40 5.9
53gb|AC131776.5| Mus musculus BAC clone RP24-318B19 from chromosom... 40 5.9
54gb|AF007748.1|AF007748 Homo sapiens karyopherin beta2b homolog m... 40 5.9
55gb|AY919613.1| Rhodothermus marinus heme-copper oxygen reductase... 40 5.9
56emb|AL606985.26| Mouse DNA sequence from clone RP23-153M14 on ch... 40 5.9
57dbj|AP000172.1| Homo sapiens genomic DNA, chromosome 21q22.1, D2... 40 5.9
58dbj|AB065967.1| Homo sapiens gene for seven transmembrane helix ... 40 5.9 
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 80       agccggctctttctcctccacc 101
                ||||||||||||||||||||||
Sbjct: 25664901 agccggctctttctcctccacc 25664922
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>dbj|AP004761.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0686C03
          Length = 164529

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 80     agccggctctttctcctccacc 101
              ||||||||||||||||||||||
Sbjct: 151592 agccggctctttctcctccacc 151613
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>dbj|AP004708.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0700D12
          Length = 145177

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 80    agccggctctttctcctccacc 101
             ||||||||||||||||||||||
Sbjct: 42649 agccggctctttctcctccacc 42670
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>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 153     ccgcccggcgcacggcggccggggc 177
               ||||||||||| |||||||||||||
Sbjct: 2146699 ccgcccggcgcgcggcggccggggc 2146675
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>emb|AL023913.6|HS1068F16 Human DNA sequence from clone RP5-1068F16 on chromosome 20p12 Contains
              the 3' end of the SNAP25 gene for 25kDa
              synaptosomal-associated protein, the RPL23AP6 gene for
              ribosomal protein L23a pseudogene 6, part of a novel gene
              and a hypoxia induced gene 1 (HIG1) pseudogene, complete
              sequence
          Length = 140306

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 53     cttcctctcctccccaccacc 73
              |||||||||||||||||||||
Sbjct: 118670 cttcctctcctccccaccacc 118690
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>emb|AL671978.2| Mouse DNA sequence from clone RP23-443E19 on chromosome X, complete
             sequence
          Length = 56222

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 51    cacttcctctcctccccaccacctc 75
             |||||||||||||||||||| ||||
Sbjct: 24929 cacttcctctcctccccaccccctc 24953
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>gb|AC150430.3| Branchiostoma floridae clone CH302-99K22, complete sequence
          Length = 131908

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 157    ccggcgcacggcggccggggccac 180
              |||| |||||||||||||||||||
Sbjct: 130180 ccggggcacggcggccggggccac 130203
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>ref|XM_512411.1| PREDICTED: Pan troglodytes transportin 2 (importin 3, karyopherin
            beta 2b) (LOC455748), mRNA
          Length = 2960

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 66   ccaccacctcaaccagccgg 85
            ||||||||||||||||||||
Sbjct: 1890 ccaccacctcaaccagccgg 1909
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>gb|AC121303.24| Mus musculus chromosome 8, clone RP23-335A5, complete sequence
          Length = 205158

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 27    cccgtccacctccctccctc 46
             ||||||||||||||||||||
Sbjct: 22538 cccgtccacctccctccctc 22519
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>ref|NM_013433.3| Homo sapiens transportin 2 (importin 3, karyopherin beta 2b) (TNPO2),
            mRNA
          Length = 4901

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 66   ccaccacctcaaccagccgg 85
            ||||||||||||||||||||
Sbjct: 1794 ccaccacctcaaccagccgg 1813
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>gb|BC072420.1| Homo sapiens transportin 2 (importin 3, karyopherin beta 2b), mRNA
            (cDNA clone MGC:90166 IMAGE:6184325), complete cds
          Length = 4901

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 66   ccaccacctcaaccagccgg 85
            ||||||||||||||||||||
Sbjct: 1794 ccaccacctcaaccagccgg 1813
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>ref|XM_580736.2| PREDICTED: Bos taurus similar to transportin 2 (importin 3,
            karyopherin beta 2b), transcript variant 1 (LOC504589),
            mRNA
          Length = 2744

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 66   ccaccacctcaaccagccgg 85
            ||||||||||||||||||||
Sbjct: 1692 ccaccacctcaaccagccgg 1711
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>ref|XM_866623.1| PREDICTED: Bos taurus similar to transportin 2 (importin 3,
            karyopherin beta 2b), transcript variant 2 (LOC504589),
            mRNA
          Length = 2832

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 66   ccaccacctcaaccagccgg 85
            ||||||||||||||||||||
Sbjct: 1780 ccaccacctcaaccagccgg 1799
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>ref|XM_878775.1| PREDICTED: Bos taurus similar to transportin 2 (importin 3,
          karyopherin beta 2b), transcript variant 3 (LOC504589),
          mRNA
          Length = 1213

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 66 ccaccacctcaaccagccgg 85
          ||||||||||||||||||||
Sbjct: 60 ccaccacctcaaccagccgg 79
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>gb|AC125151.4| Mus musculus BAC clone RP24-355K8 from chromosome 14, complete sequence
          Length = 202916

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 35     cctccctccctctccgcacttcctctcctccc 66
              |||||||||| |||| | ||||||||||||||
Sbjct: 153757 cctccctccccctcccctcttcctctcctccc 153726
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>gb|AC140233.3| Mus musculus BAC clone RP23-282N19 from chromosome 19, complete sequence
          Length = 195305

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 26     ccccgtccacctccctccct 45
              ||||||||||||||||||||
Sbjct: 110665 ccccgtccacctccctccct 110646
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>ref|XM_862403.1| PREDICTED: Canis familiaris similar to transportin 2 (importin 3,
            karyopherin beta 2b), transcript variant 4 (LOC484930),
            mRNA
          Length = 2861

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 66   ccaccacctcaaccagccgg 85
            ||||||||||||||||||||
Sbjct: 1810 ccaccacctcaaccagccgg 1829
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>ref|XM_542046.2| PREDICTED: Canis familiaris similar to transportin 2 (importin 3,
            karyopherin beta 2b), transcript variant 1 (LOC484930),
            mRNA
          Length = 2819

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 66   ccaccacctcaaccagccgg 85
            ||||||||||||||||||||
Sbjct: 1768 ccaccacctcaaccagccgg 1787
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>ref|XM_862384.1| PREDICTED: Canis familiaris similar to transportin 2 (importin 3,
            karyopherin beta 2b), transcript variant 3 (LOC484930),
            mRNA
          Length = 2789

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 66   ccaccacctcaaccagccgg 85
            ||||||||||||||||||||
Sbjct: 1738 ccaccacctcaaccagccgg 1757
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>ref|XM_862372.1| PREDICTED: Canis familiaris similar to transportin 2 (importin 3,
          karyopherin beta 2b), transcript variant 2 (LOC484930),
          mRNA
          Length = 1212

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 66 ccaccacctcaaccagccgg 85
          ||||||||||||||||||||
Sbjct: 60 ccaccacctcaaccagccgg 79
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>gb|AC123867.4| Mus musculus BAC clone RP23-127O13 from chromosome 14, complete
             sequence
          Length = 216834

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 35    cctccctccctctccgcacttcctctcctccc 66
             |||||||||| |||| | ||||||||||||||
Sbjct: 11674 cctccctccccctcccctcttcctctcctccc 11643
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>gb|AC125203.3| Mus musculus BAC clone RP23-233M21 from 19, complete sequence
          Length = 191540

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 57     ctctcctccccaccacctca 76
              ||||||||||||||||||||
Sbjct: 106501 ctctcctccccaccacctca 106482
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>gb|BC063679.1| Homo sapiens cDNA clone IMAGE:4358892, **** WARNING: chimeric clone
            ****
          Length = 1899

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 66   ccaccacctcaaccagccgg 85
            ||||||||||||||||||||
Sbjct: 1675 ccaccacctcaaccagccgg 1694
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>gb|BC018314.1| Homo sapiens transportin 2 (importin 3, karyopherin beta 2b), mRNA
            (cDNA clone IMAGE:4154236), containing frame-shift errors
          Length = 2377

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 66   ccaccacctcaaccagccgg 85
            ||||||||||||||||||||
Sbjct: 1712 ccaccacctcaaccagccgg 1731
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>gb|AC021074.15| Homo sapiens 3 BAC RP11-372E1 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 183100

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 34    acctccctccctctccgcac 53
             ||||||||||||||||||||
Sbjct: 28416 acctccctccctctccgcac 28397
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>emb|AL806526.4| Mouse DNA sequence from clone RP23-123F24 on chromosome 11 Contains a
             novel gene and a ribosomal protein S20 (Rps20) pseudogene,
             complete sequence
          Length = 128168

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 50    gcacttcctctcctccccaccacc 73
             ||||| ||||||||||||||||||
Sbjct: 56982 gcactccctctcctccccaccacc 57005
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>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome
          Length = 4171146

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 140    cctgccccgtttgccgcccggcgc 163
              |||||||| |||||||||||||||
Sbjct: 507457 cctgccccatttgccgcccggcgc 507434
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>dbj|AK056183.1| Homo sapiens cDNA FLJ31621 fis, clone NT2RI2003205, highly similar to
            Homo sapiens transportin2 mRNA
          Length = 2836

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 66   ccaccacctcaaccagccgg 85
            ||||||||||||||||||||
Sbjct: 2347 ccaccacctcaaccagccgg 2366
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>gb|AC011586.9| Homo sapiens, clone RP11-13N12, complete sequence
          Length = 167475

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 86    ctctttctcctccaccgttctcttctcc 113
             |||||||||||||||| ||||| |||||
Sbjct: 96357 ctctttctcctccacccttctcctctcc 96330
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>gb|AC009549.6| Homo sapiens chromosome 11, clone RP11-359E10, complete sequence
          Length = 180442

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 52    acttcctctcctccccacca 71
             ||||||||||||||||||||
Sbjct: 77417 acttcctctcctccccacca 77398
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>ref|XM_684776.1| PREDICTED: Danio rerio similar to Ca2+-dependent secretion activator
            isoform 2 (LOC561366), mRNA
          Length = 5064

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 85   gctctttctcctccaccgtt 104
            ||||||||||||||||||||
Sbjct: 2335 gctctttctcctccaccgtt 2316
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>gb|AC018761.6| Homo sapiens chromosome 19 clone CTD-2659N19, complete sequence
          Length = 147750

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 66    ccaccacctcaaccagccgg 85
             ||||||||||||||||||||
Sbjct: 50933 ccaccacctcaaccagccgg 50914
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>emb|AL732624.6| Mouse DNA sequence from clone RP23-118D1 on chromosome 4, complete
             sequence
          Length = 110038

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 28    ccgtccacctccctccctct 47
             ||||||||||||||||||||
Sbjct: 27868 ccgtccacctccctccctct 27849
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>gb|AC012169.8|AC012169 Homo sapiens chromosome 15 clone RP11-522G20 map 15q21.2, complete
             sequence
          Length = 180722

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 79    cagccggctctttctcctcc 98
             ||||||||||||||||||||
Sbjct: 85577 cagccggctctttctcctcc 85558
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>dbj|AK021359.1| Mus musculus 10 days lactation, adult female mammary gland cDNA,
          RIKEN full-length enriched library, clone:D730050C22
          product:unclassifiable, full insert sequence
          Length = 1048

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 28 ccgtccacctccctccctct 47
          ||||||||||||||||||||
Sbjct: 36 ccgtccacctccctccctct 17
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
              complete sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 137    gctcctgccccgtttgccgc 156
              ||||||||||||||||||||
Sbjct: 142114 gctcctgccccgtttgccgc 142133
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>dbj|AB210011.1| Homo sapiens mRNA for TNPO2 variant protein, partial cds, clone:
            fh13310
          Length = 4993

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 66   ccaccacctcaaccagccgg 85
            ||||||||||||||||||||
Sbjct: 2388 ccaccacctcaaccagccgg 2407
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>dbj|AP000057.1| Homo sapiens genomic DNA, chromosome 21q22.1, segment 28/28, complete
             sequence
          Length = 107897

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 53    cttcctctcctccccaccac 72
             ||||||||||||||||||||
Sbjct: 27783 cttcctctcctccccaccac 27764
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>gb|AC003662.3| Homo sapiens chromosome 17, clone CTB-104N19, complete sequence
          Length = 94576

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 32    ccacctccctccctctccgc 51
             ||||||||||||||||||||
Sbjct: 80347 ccacctccctccctctccgc 80328
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>gb|AC008496.6| Homo sapiens chromosome 5 clone CTC-431G16, complete sequence
          Length = 135434

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 6     aatttgggcaaccacccgac 25
             ||||||||||||||||||||
Sbjct: 28344 aatttgggcaaccacccgac 28363
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>dbj|AP002842.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
            clone:OSJNBa0075G19
          Length = 163558

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 137  gctcctgccccgtttgccgc 156
            ||||||||||||||||||||
Sbjct: 7010 gctcctgccccgtttgccgc 7029
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>dbj|AP006751.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:B1460A05
          Length = 143371

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 137    gctcctgccccgtttgccgc 156
              ||||||||||||||||||||
Sbjct: 142114 gctcctgccccgtttgccgc 142133
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>dbj|BS000192.1| Pan troglodytes chromosome 22 clone:PTB-125M11, map 22, complete
              sequences
          Length = 189269

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 53     cttcctctcctccccaccac 72
              ||||||||||||||||||||
Sbjct: 150992 cttcctctcctccccaccac 150973
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>dbj|AK121897.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033105E24, full
           insert sequence
          Length = 1430

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 137 gctcctgccccgtttgccgc 156
           ||||||||||||||||||||
Sbjct: 798 gctcctgccccgtttgccgc 817
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>dbj|AK109515.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-D06, full
           insert sequence
          Length = 1473

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 137 gctcctgccccgtttgccgc 156
           ||||||||||||||||||||
Sbjct: 800 gctcctgccccgtttgccgc 819
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>dbj|AP001721.1| Homo sapiens genomic DNA, chromosome 21q, section 65/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 53    cttcctctcctccccaccac 72
             ||||||||||||||||||||
Sbjct: 69654 cttcctctcctccccaccac 69635
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>dbj|AP000330.3| Homo sapiens genomic DNA, chromosome 21 clone:RP1-140K16, complete
              sequence
          Length = 170368

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 53     cttcctctcctccccaccac 72
              ||||||||||||||||||||
Sbjct: 154243 cttcctctcctccccaccac 154224
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>dbj|AP005621.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0681G01, complete sequence
          Length = 184118

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 137   gctcctgccccgtttgccgc 156
             ||||||||||||||||||||
Sbjct: 78428 gctcctgccccgtttgccgc 78409
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>emb|AL935208.8| Zebrafish DNA sequence from clone CH211-241N17, complete sequence
          Length = 151406

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 85    gctctttctcctccaccgtt 104
             ||||||||||||||||||||
Sbjct: 64253 gctctttctcctccaccgtt 64234
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>gb|AY998846.1| Lates calcarifer clone Lca52 microsatellite sequence
          Length = 705

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 27  cccgtccacctccctccctc 46
           ||||||||||||||||||||
Sbjct: 219 cccgtccacctccctccctc 200
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>gb|AC004063.1|AC004063 Homo sapiens chromosome 4 clone B32I8, complete sequence
          Length = 177014

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 53     cttcctctcctccccaccac 72
              ||||||||||||||||||||
Sbjct: 154014 cttcctctcctccccaccac 154033
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>gb|AF019039.1|AF019039 Homo sapiens transportin2 mRNA, complete cds
          Length = 2926

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 66   ccaccacctcaaccagccgg 85
            ||||||||||||||||||||
Sbjct: 1771 ccaccacctcaaccagccgg 1790
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>gb|AC131776.5| Mus musculus BAC clone RP24-318B19 from chromosome 16, complete
             sequence
          Length = 181574

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 35    cctccctccctctccgcacttcctctcctccc 66
             ||||||| ||||||| | ||||||||||||||
Sbjct: 17097 cctcccttcctctcctcccttcctctcctccc 17066
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>gb|AF007748.1|AF007748 Homo sapiens karyopherin beta2b homolog mRNA, complete cds
          Length = 3027

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 66   ccaccacctcaaccagccgg 85
            ||||||||||||||||||||
Sbjct: 1941 ccaccacctcaaccagccgg 1960
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>gb|AY919613.1| Rhodothermus marinus heme-copper oxygen reductase (coxA3) gene,
            partial cds
          Length = 1683

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 159  ggcgcacggcggccggggcc 178
            ||||||||||||||||||||
Sbjct: 984  ggcgcacggcggccggggcc 1003
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>emb|AL606985.26| Mouse DNA sequence from clone RP23-153M14 on chromosome 4, complete
              sequence
          Length = 193947

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 36     ctccctccctctccgcacttcctctcct 63
              ||||||||||||||  ||||||||||||
Sbjct: 121343 ctccctccctctcctgacttcctctcct 121370
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>dbj|AP000172.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone
             B2344F14-f50E8, segment 8/9, complete sequence
          Length = 100000

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 53    cttcctctcctccccaccac 72
             ||||||||||||||||||||
Sbjct: 18413 cttcctctcctccccaccac 18394
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>dbj|AB065967.1| Homo sapiens gene for seven transmembrane helix receptor, complete
            cds, isolate:CBRC7TM_530
          Length = 28315

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 32   ccacctccctccctctccgc 51
            ||||||||||||||||||||
Sbjct: 6154 ccacctccctccctctccgc 6173


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,400,375
Number of Sequences: 3902068
Number of extensions: 3400375
Number of successful extensions: 115303
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 115058
Number of HSP's gapped (non-prelim): 244
length of query: 440
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 418
effective length of database: 17,147,199,772
effective search space: 7167529504696
effective search space used: 7167529504696
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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