Clone Name | bastl12b02 |
---|---|
Clone Library Name | barley_pub |
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 1.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 cgcatgcctgctcctcgtcg 63 |||||||||||||||||||| Sbjct: 3584729 cgcatgcctgctcctcgtcg 3584748
>emb|CR792458.6| Zebrafish DNA sequence from clone RP71-47I2, complete sequence Length = 186632 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 17 cttcccggcttggccttgc 35 ||||||||||||||||||| Sbjct: 65818 cttcccggcttggccttgc 65836
>gb|AC117944.2| Homo sapiens chromosome 1 clone RP4-653E17, complete sequence Length = 55673 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 2 aattaatcccaacaccttc 20 ||||||||||||||||||| Sbjct: 35123 aattaatcccaacaccttc 35105
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 49 gcctgctcctcgtcgatca 67 ||||||||||||||||||| Sbjct: 1339406 gcctgctcctcgtcgatca 1339388
>dbj|AK052327.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched library, clone:D330028P16 product:POTASSIUM CHANNEL SUBFAMILY K MEMBER 10 (OUTWARD RECTIFYING POTASSIUM CHANNEL PROTEIN TREK-2) (TREK-2 K+ CHANNEL SUBUNIT) homolog [Rattus norvegicus], full insert sequence Length = 2670 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 64 atcagcctcccaaacccta 82 ||||||||||||||||||| Sbjct: 2069 atcagcctcccaaacccta 2051
>gb|AC009376.7| Drosophila melanogaster 3 BAC RPCI98-1D4 (Roswell Park Cancer Institute Human PAC library) complete sequence Length = 183948 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 25 cttggccttgcttagattc 43 ||||||||||||||||||| Sbjct: 147566 cttggccttgcttagattc 147584
>gb|AE003516.4| Drosophila melanogaster chromosome 3L, section 69 of 83 of the complete sequence Length = 305312 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 25 cttggccttgcttagattc 43 ||||||||||||||||||| Sbjct: 23988 cttggccttgcttagattc 23970
>gb|AC134249.4| Mus musculus BAC clone RP23-359K17 from 12, complete sequence Length = 190423 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 64 atcagcctcccaaacccta 82 ||||||||||||||||||| Sbjct: 121395 atcagcctcccaaacccta 121413 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,343,780 Number of Sequences: 3902068 Number of extensions: 1343780 Number of successful extensions: 339349 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 8 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 339195 Number of HSP's gapped (non-prelim): 154 length of query: 104 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 83 effective length of database: 17,151,101,840 effective search space: 1423541452720 effective search space used: 1423541452720 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)