Clone Name | bastl12a09 |
---|---|
Clone Library Name | barley_pub |
>BGAL_MALDO (P48981) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) (Acid| beta-galactosidase) (Exo-(1-->4)-beta-D-galactanase) Length = 731 Score = 37.4 bits (85), Expect = 0.015 Identities = 13/27 (48%), Positives = 25/27 (92%) Frame = +3 Query: 348 TSAATNVTYDHRALVIDGVRRVLVSGS 428 ++A+ +V+YDH+A++I+G +R+L+SGS Sbjct: 20 SAASASVSYDHKAIIINGQKRILISGS 46
>BGAL_ASPOF (P45582) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase)| Length = 832 Score = 36.2 bits (82), Expect = 0.034 Identities = 13/26 (50%), Positives = 22/26 (84%) Frame = +3 Query: 351 SAATNVTYDHRALVIDGVRRVLVSGS 428 + +VTYDH++++I+G RR+L+SGS Sbjct: 22 AVTASVTYDHKSVIINGQRRILISGS 47
>BGAL_BRAOL (P49676) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase)| Length = 828 Score = 35.0 bits (79), Expect = 0.075 Identities = 15/28 (53%), Positives = 23/28 (82%) Frame = +3 Query: 345 GTSAATNVTYDHRALVIDGVRRVLVSGS 428 G++ +T V++D RA+ IDG RR+L+SGS Sbjct: 20 GSANSTIVSHDERAITIDGQRRILLSGS 47
>BGAL_LYCES (P48980) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) (Acid| beta-galactosidase) (Exo-(1-->4)-beta-D-galactanase) Length = 835 Score = 34.3 bits (77), Expect = 0.13 Identities = 11/22 (50%), Positives = 21/22 (95%) Frame = +3 Query: 363 NVTYDHRALVIDGVRRVLVSGS 428 +V+YDH+A++++G R++L+SGS Sbjct: 23 SVSYDHKAIIVNGQRKILISGS 44
>BGAL_DIACA (Q00662) Putative beta-galactosidase precursor (EC 3.2.1.23)| (Lactase) (SR12 protein) Length = 731 Score = 30.0 bits (66), Expect = 2.4 Identities = 13/22 (59%), Positives = 18/22 (81%) Frame = +3 Query: 363 NVTYDHRALVIDGVRRVLVSGS 428 NV YD+RA+ I+ RR+L+SGS Sbjct: 30 NVWYDYRAIKINDQRRILLSGS 51
>TTGH_PSEPU (Q93PU4) Toluene efflux pump membrane transporter ttgH| Length = 1049 Score = 28.1 bits (61), Expect = 9.2 Identities = 14/29 (48%), Positives = 19/29 (65%) Frame = -1 Query: 270 RSPEKKQRQGLHLVRGMMAFGVLAELVAR 184 R PE+ QRQGL +V+ M F ++ LV R Sbjct: 117 RLPEEVQRQGLRVVKYQMNFFLVMSLVDR 145
>SRPB_PSEPU (O31100) Solvent resistant pump membrane transporter srpB| Length = 1049 Score = 28.1 bits (61), Expect = 9.2 Identities = 14/29 (48%), Positives = 19/29 (65%) Frame = -1 Query: 270 RSPEKKQRQGLHLVRGMMAFGVLAELVAR 184 R PE+ QRQGL +V+ M F ++ LV R Sbjct: 117 RLPEEVQRQGLRVVKYQMNFFLVMSLVDR 145 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 33,730,197 Number of Sequences: 219361 Number of extensions: 339380 Number of successful extensions: 994 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 983 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 994 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2395157885 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)