ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl12a07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY111338.1| Zea mays CL2352_-1 mRNA sequence 147 3e-32
2gb|L33913.1|MZEAKHDA Zea mays (clone pAKHSDH2) aspartate kinase-... 147 3e-32
3dbj|AK068391.1| Oryza sativa (japonica cultivar-group) cDNA clon... 133 4e-28
4dbj|D78573.1|RICAKHD Rice mRNA for aspartate kinase-homoserine d... 133 4e-28
5dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 125 1e-25
6dbj|AP005839.3| Oryza sativa (japonica cultivar-group) genomic D... 125 1e-25
7gb|AY111528.1| Zea mays CL2353_1 mRNA sequence 72 1e-09
8gb|L33912.1|MZEAKHD Zea mays (clone pAKHSDH1) aspartate kinase-h... 72 1e-09
9ref|XM_481776.1| Oryza sativa (japonica cultivar-group), mRNA 68 2e-08
10ref|XM_481775.1| Oryza sativa (japonica cultivar-group), mRNA 68 2e-08
11dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 68 2e-08
12dbj|AP004553.2| Oryza sativa (japonica cultivar-group) genomic D... 68 2e-08
13dbj|AK066783.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 2e-08
14gb|DQ213556.1| Taeniopygia guttata clone 0058P0055A05 U3 snoRNP ... 42 1.2
15gb|DQ213555.1| Taeniopygia guttata clone 0058P0055E07 U3 snoRNP ... 42 1.2
16gb|DQ213554.1| Taeniopygia guttata clone 0058P0055F07 U3 snoRNP ... 42 1.2
17gb|DQ213553.1| Taeniopygia guttata clone 0058P0059C06 U3 snoRNP ... 42 1.2
18gb|DQ213552.1| Taeniopygia guttata clone 0058P0055D07 U3 snoRNP ... 42 1.2
19gb|AC108880.2| Homo sapiens chromosome X clone RP11-403L9 map p1... 40 4.9
20gb|AC091808.4| Homo sapiens chromosome X clone RP11-157D23 map p... 40 4.9
21gb|AC017060.7| Homo sapiens BAC clone RP11-350D14 from 7, comple... 40 4.9
22emb|AL161426.7| Human DNA sequence from clone RP11-23P11 on chro... 40 4.9
23gb|CP000088.1| Thermobifida fusca YX, complete genome 40 4.9
24gb|AC147484.21| Medicago truncatula clone mth2-52b4, complete se... 40 4.9
25gb|AF421223.1| Acanthopteroctetes unifasciata 18S ribosomal RNA ... 40 4.9
26gb|AC021001.5|AC021001 Homo sapiens chromosome 8, clone RP11-419... 40 4.9
27gb|AY555583.1| Pediculus humanus glutamyl aminopeptidase (APA1) ... 40 4.9
28dbj|AP000427.3| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 4.9
29emb|AL732568.8| Mouse DNA sequence from clone RP23-469G19 on chr... 40 4.9
30dbj|BA000009.3| Beta vulgaris subsp. vulgaris mitochondrial geno... 40 4.9
31dbj|BA000024.1| Beta vulgaris subsp. vulgaris mitochondrial geno... 40 4.9 
>gb|AY111338.1| Zea mays CL2352_-1 mRNA sequence
          Length = 3045

 Score =  147 bits (74), Expect = 3e-32
 Identities = 101/110 (91%)
 Strand = Plus / Plus

                                                                       
Query: 256 ctcacaccagctgctgcagccgtttcagttgaacaagttgaagtcagtacttatcttcca 315
           |||| |||||||||||||||  ||||||||||||||| |||||||| |||||||||||||
Sbjct: 242 ctcagaccagctgctgcagctatttcagttgaacaagatgaagtcaatacttatcttcca 301

                                                             
Query: 316 aaaggtgatatgtggcctgtgcacaagttcggtggcacttgcatgggaac 365
           ||||||||||||||| ||||||||||||||||||| || || ||||||||
Sbjct: 302 aaaggtgatatgtggtctgtgcacaagttcggtggaacctgtatgggaac 351
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>gb|L33913.1|MZEAKHDA Zea mays (clone pAKHSDH2) aspartate kinase-homoserine dehydrogenase
           mRNA, complete cds
          Length = 3045

 Score =  147 bits (74), Expect = 3e-32
 Identities = 101/110 (91%)
 Strand = Plus / Plus

                                                                       
Query: 256 ctcacaccagctgctgcagccgtttcagttgaacaagttgaagtcagtacttatcttcca 315
           |||| |||||||||||||||  ||||||||||||||| |||||||| |||||||||||||
Sbjct: 242 ctcagaccagctgctgcagctatttcagttgaacaagatgaagtcaatacttatcttcca 301

                                                             
Query: 316 aaaggtgatatgtggcctgtgcacaagttcggtggcacttgcatgggaac 365
           ||||||||||||||| ||||||||||||||||||| || || ||||||||
Sbjct: 302 aaaggtgatatgtggtctgtgcacaagttcggtggaacctgtatgggaac 351
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>dbj|AK068391.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013146N15, full
           insert sequence
          Length = 3120

 Score =  133 bits (67), Expect = 4e-28
 Identities = 123/141 (87%), Gaps = 3/141 (2%)
 Strand = Plus / Plus

                                                                       
Query: 228 tttgccaagacatggttctaagaatctgctcacaccagctgctgcagccgtttcagttga 287
           ||||| |||||||||||| | |||| ||||| ||   |||||||| ||  ||||| ||||
Sbjct: 253 tttgcaaagacatggttccaggaatttgctcgca---gctgctgcggctatttcaattga 309

                                                                       
Query: 288 acaagttgaagtcagtacttatcttccaaaaggtgatatgtggcctgtgcacaagttcgg 347
           ||||| |||||||||||||||||||||||||||||| |||||| ||||||||||||| ||
Sbjct: 310 acaagctgaagtcagtacttatcttccaaaaggtgacatgtggtctgtgcacaagtttgg 369

                                
Query: 348 tggcacttgcatgggaacacc 368
           |||||| || |||||||||||
Sbjct: 370 tggcacctgtatgggaacacc 390



 Score =  133 bits (67), Expect = 4e-28
 Identities = 121/139 (87%)
 Strand = Plus / Plus

                                                                       
Query: 68  gcgagatgcggagcctcgccgtcgcgagccccgtcccgacagccgccgcccatcgacgga 127
           |||||||||||||||||||||||||||||||| ||||| | ||||||||   ||| ||  
Sbjct: 81  gcgagatgcggagcctcgccgtcgcgagccccctcccgcccgccgccgcggttcgccgcc 140

                                                                       
Query: 128 ggctccggccgtccgcctccggcagggaagtaatttcacaatgtttgaagtgtgagataa 187
           |||  ||  | ||||||||||| |||||||| ||||||||||||| ||||||||||||||
Sbjct: 141 ggccacgcgcatccgcctccggaagggaagtgatttcacaatgttggaagtgtgagataa 200

                              
Query: 188 atcaggaccgacctttggg 206
           ||||||||| |||||||||
Sbjct: 201 atcaggaccaacctttggg 219
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>dbj|D78573.1|RICAKHD Rice mRNA for aspartate kinase-homoserine dehydrogenase, complete
           cds
          Length = 3061

 Score =  133 bits (67), Expect = 4e-28
 Identities = 123/141 (87%), Gaps = 3/141 (2%)
 Strand = Plus / Plus

                                                                       
Query: 228 tttgccaagacatggttctaagaatctgctcacaccagctgctgcagccgtttcagttga 287
           ||||| |||||||||||| | |||| ||||| ||   |||||||| ||  ||||| ||||
Sbjct: 220 tttgcaaagacatggttccaggaatttgctcgca---gctgctgcggctatttcaattga 276

                                                                       
Query: 288 acaagttgaagtcagtacttatcttccaaaaggtgatatgtggcctgtgcacaagttcgg 347
           ||||| |||||||||||||||||||||||||||||| |||||| ||||||||||||| ||
Sbjct: 277 acaagctgaagtcagtacttatcttccaaaaggtgacatgtggtctgtgcacaagtttgg 336

                                
Query: 348 tggcacttgcatgggaacacc 368
           |||||| || |||||||||||
Sbjct: 337 tggcacctgtatgggaacacc 357



 Score =  133 bits (67), Expect = 4e-28
 Identities = 121/139 (87%)
 Strand = Plus / Plus

                                                                       
Query: 68  gcgagatgcggagcctcgccgtcgcgagccccgtcccgacagccgccgcccatcgacgga 127
           |||||||||||||||||||||||||||||||| ||||| | ||||||||   ||| ||  
Sbjct: 48  gcgagatgcggagcctcgccgtcgcgagccccctcccgcccgccgccgcggttcgccgcc 107

                                                                       
Query: 128 ggctccggccgtccgcctccggcagggaagtaatttcacaatgtttgaagtgtgagataa 187
           |||  ||  | ||||||||||| |||||||| ||||||||||||| ||||||||||||||
Sbjct: 108 ggccacgcgcatccgcctccggaagggaagtgatttcacaatgttggaagtgtgagataa 167

                              
Query: 188 atcaggaccgacctttggg 206
           ||||||||| |||||||||
Sbjct: 168 atcaggaccaacctttggg 186
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score =  125 bits (63), Expect = 1e-25
 Identities = 84/91 (92%)
 Strand = Plus / Minus

                                                                           
Query: 278     tttcagttgaacaagttgaagtcagtacttatcttccaaaaggtgatatgtggcctgtgc 337
               ||||| ||||||||| |||||||||||||||||||||||||||||| |||||| ||||||
Sbjct: 6953046 tttcaattgaacaagctgaagtcagtacttatcttccaaaaggtgacatgtggtctgtgc 6952987

                                              
Query: 338     acaagttcggtggcacttgcatgggaacacc 368
               ||||||| |||||||| || |||||||||||
Sbjct: 6952986 acaagtttggtggcacctgtatgggaacacc 6952956



 Score = 89.7 bits (45), Expect = 6e-15
 Identities = 54/57 (94%)
 Strand = Plus / Minus

                                                                        
Query: 150     cagggaagtaatttcacaatgtttgaagtgtgagataaatcaggaccgacctttggg 206
               ||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 6954192 cagggaagtgatttcacaatgttggaagtgtgagataaatcaggaccaacctttggg 6954136



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 46/49 (93%)
 Strand = Plus / Minus

                                                                
Query: 68      gcgagatgcggagcctcgccgtcgcgagccccgtcccgacagccgccgc 116
               |||||||||||||||||||||||||||||||| ||||| | ||||||||
Sbjct: 6955210 gcgagatgcggagcctcgccgtcgcgagccccctcccgcccgccgccgc 6955162
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>dbj|AP005839.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0044K01
          Length = 160643

 Score =  125 bits (63), Expect = 1e-25
 Identities = 84/91 (92%)
 Strand = Plus / Minus

                                                                         
Query: 278   tttcagttgaacaagttgaagtcagtacttatcttccaaaaggtgatatgtggcctgtgc 337
             ||||| ||||||||| |||||||||||||||||||||||||||||| |||||| ||||||
Sbjct: 24217 tttcaattgaacaagctgaagtcagtacttatcttccaaaaggtgacatgtggtctgtgc 24158

                                            
Query: 338   acaagttcggtggcacttgcatgggaacacc 368
             ||||||| |||||||| || |||||||||||
Sbjct: 24157 acaagtttggtggcacctgtatgggaacacc 24127



 Score = 89.7 bits (45), Expect = 6e-15
 Identities = 54/57 (94%)
 Strand = Plus / Minus

                                                                      
Query: 150   cagggaagtaatttcacaatgtttgaagtgtgagataaatcaggaccgacctttggg 206
             ||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 25363 cagggaagtgatttcacaatgttggaagtgtgagataaatcaggaccaacctttggg 25307



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 46/49 (93%)
 Strand = Plus / Minus

                                                              
Query: 68    gcgagatgcggagcctcgccgtcgcgagccccgtcccgacagccgccgc 116
             |||||||||||||||||||||||||||||||| ||||| | ||||||||
Sbjct: 26381 gcgagatgcggagcctcgccgtcgcgagccccctcccgcccgccgccgc 26333
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>gb|AY111528.1| Zea mays CL2353_1 mRNA sequence
          Length = 3153

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 96/116 (82%)
 Strand = Plus / Plus

                                                                       
Query: 247 aagaatctgctcacaccagctgctgcagccgtttcagttgaacaagttgaagtcagtact 306
           |||||| ||||| ||||| ||||||  || ||||||||||| |||| |||||  | | ||
Sbjct: 240 aagaatttgctcgcaccaactgctggtgctgtttcagttgagcaagctgaagctattgct 299

                                                                   
Query: 307 tatcttccaaaaggtgatatgtggcctgtgcacaagttcggtggcacttgcatggg 362
            | || ||||||||||| |||||| | ||||||||||| |||||||| ||||||||
Sbjct: 300 gacctcccaaaaggtgacatgtggtcggtgcacaagtttggtggcacatgcatggg 355
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>gb|L33912.1|MZEAKHD Zea mays (clone pAKHSDH1) aspartate kinase-homoserine dehydrogenase
           mRNA, complete cds
          Length = 3178

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 96/116 (82%)
 Strand = Plus / Plus

                                                                       
Query: 247 aagaatctgctcacaccagctgctgcagccgtttcagttgaacaagttgaagtcagtact 306
           |||||| ||||| ||||| ||||||  || ||||||||||| |||| |||||  | | ||
Sbjct: 240 aagaatttgctcgcaccaactgctggtgctgtttcagttgagcaagctgaagctattgct 299

                                                                   
Query: 307 tatcttccaaaaggtgatatgtggcctgtgcacaagttcggtggcacttgcatggg 362
            | || ||||||||||| |||||| | ||||||||||| |||||||| ||||||||
Sbjct: 300 gacctcccaaaaggtgacatgtggtcggtgcacaagtttggtggcacatgcatggg 355
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>ref|XM_481776.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2727

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 82/98 (83%)
 Strand = Plus / Plus

                                                                       
Query: 268 gctgcagccgtttcagttgaacaagttgaagtcagtacttatcttccaaaaggtgatatg 327
           ||||| || ||||||||||| |||| |||||  ||| || | |||||||||||||| |||
Sbjct: 273 gctgctgctgtttcagttgagcaagctgaagctagtgctcaccttccaaaaggtgacatg 332

                                                 
Query: 328 tggcctgtgcacaagttcggtggcacttgcatgggaac 365
           ||| ||||||| || || ||||| || |||||||||||
Sbjct: 333 tggtctgtgcataaatttggtgggacctgcatgggaac 370



 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 77 ggagcctcgccgtcgcgagccc 98
          ||||||||||||||||||||||
Sbjct: 55 ggagcctcgccgtcgcgagccc 76
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>ref|XM_481775.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2766

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 82/98 (83%)
 Strand = Plus / Plus

                                                                       
Query: 268 gctgcagccgtttcagttgaacaagttgaagtcagtacttatcttccaaaaggtgatatg 327
           ||||| || ||||||||||| |||| |||||  ||| || | |||||||||||||| |||
Sbjct: 223 gctgctgctgtttcagttgagcaagctgaagctagtgctcaccttccaaaaggtgacatg 282

                                                 
Query: 328 tggcctgtgcacaagttcggtggcacttgcatgggaac 365
           ||| ||||||| || || ||||| || |||||||||||
Sbjct: 283 tggtctgtgcataaatttggtgggacctgcatgggaac 320



 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 77 ggagcctcgccgtcgcgagccc 98
          ||||||||||||||||||||||
Sbjct: 5  ggagcctcgccgtcgcgagccc 26
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 79/94 (84%)
 Strand = Plus / Minus

                                                                            
Query: 272      cagccgtttcagttgaacaagttgaagtcagtacttatcttccaaaaggtgatatgtggc 331
                |||| ||||||||||| |||| |||||  ||| || | |||||||||||||| |||||| 
Sbjct: 15441961 cagctgtttcagttgagcaagctgaagctagtgctcaccttccaaaaggtgacatgtggt 15441902

                                                  
Query: 332      ctgtgcacaagttcggtggcacttgcatgggaac 365
                ||||||| || || ||||| || |||||||||||
Sbjct: 15441901 ctgtgcataaatttggtgggacctgcatgggaac 15441868



 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 77       ggagcctcgccgtcgcgagccc 98
                ||||||||||||||||||||||
Sbjct: 15443315 ggagcctcgccgtcgcgagccc 15443294
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>dbj|AP004553.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1790_D02
          Length = 162928

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 79/94 (84%)
 Strand = Plus / Minus

                                                                          
Query: 272    cagccgtttcagttgaacaagttgaagtcagtacttatcttccaaaaggtgatatgtggc 331
              |||| ||||||||||| |||| |||||  ||| || | |||||||||||||| |||||| 
Sbjct: 127537 cagctgtttcagttgagcaagctgaagctagtgctcaccttccaaaaggtgacatgtggt 127478

                                                
Query: 332    ctgtgcacaagttcggtggcacttgcatgggaac 365
              ||||||| || || ||||| || |||||||||||
Sbjct: 127477 ctgtgcataaatttggtgggacctgcatgggaac 127444



 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 77     ggagcctcgccgtcgcgagccc 98
              ||||||||||||||||||||||
Sbjct: 128891 ggagcctcgccgtcgcgagccc 128870
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>dbj|AK066783.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075O09, full
           insert sequence
          Length = 2726

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 82/98 (83%)
 Strand = Plus / Plus

                                                                       
Query: 268 gctgcagccgtttcagttgaacaagttgaagtcagtacttatcttccaaaaggtgatatg 327
           ||||| || ||||||||||| |||| |||||  ||| || | |||||||||||||| |||
Sbjct: 272 gctgctgctgtttcagttgagcaagctgaagctagtgctcaccttccaaaaggtgacatg 331

                                                 
Query: 328 tggcctgtgcacaagttcggtggcacttgcatgggaac 365
           ||| ||||||| || || ||||| || |||||||||||
Sbjct: 332 tggtctgtgcataaatttggtgggacctgcatgggaac 369



 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 77 ggagcctcgccgtcgcgagccc 98
          ||||||||||||||||||||||
Sbjct: 54 ggagcctcgccgtcgcgagccc 75
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>gb|DQ213556.1| Taeniopygia guttata clone 0058P0055A05 U3 snoRNP protein 4-like
           mRNA, complete sequence
          Length = 1070

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 96  ccccgtcccgacagccgccgc 116
           |||||||||||||||||||||
Sbjct: 662 ccccgtcccgacagccgccgc 682
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>gb|DQ213555.1| Taeniopygia guttata clone 0058P0055E07 U3 snoRNP protein 4-like
           mRNA, complete sequence
          Length = 1072

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 96  ccccgtcccgacagccgccgc 116
           |||||||||||||||||||||
Sbjct: 663 ccccgtcccgacagccgccgc 683
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>gb|DQ213554.1| Taeniopygia guttata clone 0058P0055F07 U3 snoRNP protein 4-like
           mRNA, complete sequence
          Length = 1072

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 96  ccccgtcccgacagccgccgc 116
           |||||||||||||||||||||
Sbjct: 663 ccccgtcccgacagccgccgc 683
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>gb|DQ213553.1| Taeniopygia guttata clone 0058P0059C06 U3 snoRNP protein 4-like
           mRNA, complete sequence
          Length = 1072

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 96  ccccgtcccgacagccgccgc 116
           |||||||||||||||||||||
Sbjct: 663 ccccgtcccgacagccgccgc 683
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>gb|DQ213552.1| Taeniopygia guttata clone 0058P0055D07 U3 snoRNP protein 4-like
           mRNA, complete sequence
          Length = 1072

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 96  ccccgtcccgacagccgccgc 116
           |||||||||||||||||||||
Sbjct: 663 ccccgtcccgacagccgccgc 683
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>gb|AC108880.2| Homo sapiens chromosome X clone RP11-403L9 map p11.4, complete sequence
          Length = 218413

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 155   aagtaatttcacaatgtttg 174
             ||||||||||||||||||||
Sbjct: 91169 aagtaatttcacaatgtttg 91150
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>gb|AC091808.4| Homo sapiens chromosome X clone RP11-157D23 map p11.4, complete sequence
          Length = 170219

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 155    aagtaatttcacaatgtttg 174
              ||||||||||||||||||||
Sbjct: 149534 aagtaatttcacaatgtttg 149515
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>gb|AC017060.7| Homo sapiens BAC clone RP11-350D14 from 7, complete sequence
          Length = 103354

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 219  aggaggaaatttgccaagac 238
            ||||||||||||||||||||
Sbjct: 6406 aggaggaaatttgccaagac 6387
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>emb|AL161426.7| Human DNA sequence from clone RP11-23P11 on chromosome 13 Contains part
             of the GPC6 gene for glypican 6 and the 3' end of a novel
             gene, complete sequence
          Length = 150021

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 170   gtttgaagtgtgagataaat 189
             ||||||||||||||||||||
Sbjct: 55476 gtttgaagtgtgagataaat 55495
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>gb|CP000088.1| Thermobifida fusca YX, complete genome
          Length = 3642249

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 142     gcctccggcagggaagtaat 161
               ||||||||||||||||||||
Sbjct: 1710536 gcctccggcagggaagtaat 1710517
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>gb|AC147484.21| Medicago truncatula clone mth2-52b4, complete sequence
          Length = 119559

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 250   aatctgctcacaccagctgctgca 273
             ||||||||||||||| ||||||||
Sbjct: 32456 aatctgctcacaccatctgctgca 32479
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>gb|AF421223.1| Acanthopteroctetes unifasciata 18S ribosomal RNA gene, partial
           sequence
          Length = 646

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 119 atcgacggaggctccggccg 138
           ||||||||||||||||||||
Sbjct: 147 atcgacggaggctccggccg 166
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>gb|AC021001.5|AC021001 Homo sapiens chromosome 8, clone RP11-419L20, complete sequence
          Length = 175742

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 157   gtaatttcacaatgtttgaagtgt 180
             ||||||||||||||||| ||||||
Sbjct: 56356 gtaatttcacaatgtttcaagtgt 56333
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>gb|AY555583.1| Pediculus humanus glutamyl aminopeptidase (APA1) mRNA, complete cds
          Length = 2901

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 263 cagctgctgcagccgtttca 282
           ||||||||||||||||||||
Sbjct: 880 cagctgctgcagccgtttca 899
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>dbj|AP000427.3| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1171G1
          Length = 187189

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 157   gtaatttcacaatgtttgaagtgt 180
             ||||||||||||||||| ||||||
Sbjct: 39345 gtaatttcacaatgtttcaagtgt 39368
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>emb|AL732568.8| Mouse DNA sequence from clone RP23-469G19 on chromosome 4, complete
             sequence
          Length = 169474

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 248   agaatctgctcacaccagct 267
             ||||||||||||||||||||
Sbjct: 81779 agaatctgctcacaccagct 81760
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>dbj|BA000009.3| Beta vulgaris subsp. vulgaris mitochondrial genomic DNA, complete
              sequence
          Length = 368801

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 296    aagtcagtacttatcttccaaaag 319
              |||||||| |||||||||||||||
Sbjct: 209001 aagtcagttcttatcttccaaaag 208978



 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 296    aagtcagtacttatcttccaaaag 319
              |||||||| |||||||||||||||
Sbjct: 132203 aagtcagttcttatcttccaaaag 132226
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>dbj|BA000024.1| Beta vulgaris subsp. vulgaris mitochondrial genomic DNA, complete
              sequence
          Length = 501020

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 296    aagtcagtacttatcttccaaaag 319
              |||||||| |||||||||||||||
Sbjct: 500349 aagtcagttcttatcttccaaaag 500372



 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 296    aagtcagtacttatcttccaaaag 319
              |||||||| |||||||||||||||
Sbjct: 326840 aagtcagttcttatcttccaaaag 326863



 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 296    aagtcagtacttatcttccaaaag 319
              |||||||| |||||||||||||||
Sbjct: 134324 aagtcagttcttatcttccaaaag 134347


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,324,537
Number of Sequences: 3902068
Number of extensions: 2324537
Number of successful extensions: 45616
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 45512
Number of HSP's gapped (non-prelim): 100
length of query: 370
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 348
effective length of database: 17,147,199,772
effective search space: 5967225520656
effective search space used: 5967225520656
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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