ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bastl12a06 |
|---|---|
| Clone Library Name | barley_pub |
>NUDEL_DROME (P98159) Serine protease nudel precursor (EC 3.4.21.-)| Length = 2616 Score = 31.2 bits (69), Expect = 0.68 Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 3/79 (3%) Frame = -2 Query: 255 DNNSLKEPLDERDWKFLASSKCRTSWSKGPDATDSALSPLQAIASYLFLVKDTWNT---A 85 D+ LK DE D +S +T ++GP A + L + +T +T Sbjct: 1473 DDEDLKAEQDEEDLLKSTTSLGQTETTQGPMDLSFAEQITSTTSDDLSITDETTSTDFTV 1532 Query: 84 ESSSTSPATLLSILPTTTS 28 S+TSP+TLL PTTT+ Sbjct: 1533 SDSATSPSTLL---PTTTN 1548
>WSC2_YEAST (P53832) Cell wall integrity and stress response component 2| precursor Length = 503 Score = 31.2 bits (69), Expect = 0.68 Identities = 20/67 (29%), Positives = 31/67 (46%) Frame = -2 Query: 204 ASSKCRTSWSKGPDATDSALSPLQAIASYLFLVKDTWNTAESSSTSPATLLSILPTTTSA 25 +++ TS S P T S+ S + + + T+ SSSTS AT+ S +T+ Sbjct: 200 STTSSTTSTSSSPSTTSSSTSASSSSETSSTQATSSSTTSTSSSTSTATVTSTPSSTSIG 259 Query: 24 DPNSYTT 4 YTT Sbjct: 260 TSTHYTT 266
>CP21A_PIG (P15540) Cytochrome P450 21 (EC 1.14.99.10) (Cytochrome P450 XXI)| (Steroid 21-hydroxylase) (21-OHase) (P450-C21) (P-450c21) Length = 492 Score = 30.8 bits (68), Expect = 0.89 Identities = 12/30 (40%), Positives = 19/30 (63%) Frame = -3 Query: 98 LGTLQNQAPRRQQLSSPFCPQLQAQTPTPI 9 LG + PR +QL+ FC +++AQ TP+ Sbjct: 130 LGVRSSMEPRVEQLTQEFCERMRAQAGTPV 159
>PBP2_HAEIN (P44469) Penicillin-binding protein 2 (PBP-2)| Length = 651 Score = 30.8 bits (68), Expect = 0.89 Identities = 20/78 (25%), Positives = 34/78 (43%) Frame = -2 Query: 264 PSPDNNSLKEPLDERDWKFLASSKCRTSWSKGPDATDSALSPLQAIASYLFLVKDTWNTA 85 PS DNN + + D+K L + R +S+ AT A P + ++ + T N Sbjct: 298 PSYDNNLFVDGISSEDYKRLLNDLARPLYSR---ATQGAYPPASTVKPFIAVAAQTENVI 354 Query: 84 ESSSTSPATLLSILPTTT 31 ++T +LP +T Sbjct: 355 TPNTTIFDPGYWVLPNST 372
>NAS32_CAEEL (O16977) Zinc metalloproteinase nas-32 precursor (EC 3.4.24.21)| (Nematode astacin 32) Length = 651 Score = 30.8 bits (68), Expect = 0.89 Identities = 27/81 (33%), Positives = 37/81 (45%) Frame = -2 Query: 255 DNNSLKEPLDERDWKFLASSKCRTSWSKGPDATDSALSPLQAIASYLFLVKDTWNTAESS 76 DNNS +E + DWKF G ++ P SY + K TWN + + Sbjct: 24 DNNSEEERDRKFDWKF--------ENENGKPEHETVTVPKLPDGSYFW--KWTWN-SRIN 72 Query: 75 STSPATLLSILPTTTSADPNS 13 ST+ AT S + T+TSA S Sbjct: 73 STTAATPTSTVTTSTSAPTTS 93
>YKD8_YEAST (P32862) Putative 128.2 kDa transcriptional regulatory protein in| PTM1-IXR1 intergenic region Length = 1170 Score = 30.4 bits (67), Expect = 1.2 Identities = 19/85 (22%), Positives = 39/85 (45%), Gaps = 11/85 (12%) Frame = -2 Query: 267 FPSPDNNSLKEPLDER-----------DWKFLASSKCRTSWSKGPDATDSALSPLQAIAS 121 FP PD N +K P+DE +++ + S + S P++ D +S + Sbjct: 712 FPEPDINDVKPPVDEEVSTGNGNTKTSEFEIGSESAGHMNPSNSPNSMDENISHYSVLFK 771 Query: 120 YLFLVKDTWNTAESSSTSPATLLSI 46 L+++ +++ +S + LL+I Sbjct: 772 RLYVLLSVFDSLQSCAFGGPKLLNI 796
>FABB_HAEIN (P43710) 3-oxoacyl-[acyl-carrier-protein] synthase 1 (EC 2.3.1.41)| (3-oxoacyl-[acyl-carrier-protein] synthase I) (Beta-ketoacyl-ACP synthase I) (KAS I) Length = 406 Score = 30.0 bits (66), Expect = 1.5 Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 7/65 (10%) Frame = +2 Query: 20 GSALVVVGKMERRVAGDVELDSAVFQVSLTKNRYEAIACNGESAE-------SVASGPFD 178 G A+VVV ++E +A ++ + + T + Y+ +A +GE AE + P D Sbjct: 233 GGAVVVVEELEHALARGAKIYAEIVGYGATSDGYDMVAPSGEGAERCMKQAMATVDTPID 292 Query: 179 QLVLH 193 + +H Sbjct: 293 YINVH 297
>YS89_CAEEL (Q09624) Hypothetical protein ZK945.9| Length = 3178 Score = 29.6 bits (65), Expect = 2.0 Identities = 23/98 (23%), Positives = 43/98 (43%), Gaps = 12/98 (12%) Frame = -2 Query: 276 VEPFPSPDNNSLKEPL-------DERDWKFLASSKCRTSWSK-GPDATDSALSPLQ---- 133 + P P+ + +L + + + L S C T + K G + + +P+ Sbjct: 997 ITPIPNKEPGALTTAMTCQCRNDSSQPFVLLKESNCLTEFGKNGAYSASVSFNPMTSFVP 1056 Query: 132 AIASYLFLVKDTWNTAESSSTSPATLLSILPTTTSADP 19 A +Y FL+ T + S++ T+ +LPTTT+ P Sbjct: 1057 ATGTYEFLINVTNRASGESASHIFTMNVVLPTTTTETP 1094 Score = 28.9 bits (63), Expect = 3.4 Identities = 22/65 (33%), Positives = 33/65 (50%) Frame = -2 Query: 201 SSKCRTSWSKGPDATDSALSPLQAIASYLFLVKDTWNTAESSSTSPATLLSILPTTTSAD 22 SS TS P +T S+ S + S L + T + ES++ S T +S +TTS+ Sbjct: 681 SSTLSTSTVTEPSSTRSSDSTTTSAGSTTTLQESTTTSEESTTDSSTTTISDT-STTSSS 739 Query: 21 PNSYT 7 P+S T Sbjct: 740 PSSTT 744
>PRY2_YEAST (P36110) Protein PRY2 precursor (Pathogen related in Sc 2)| Length = 329 Score = 29.6 bits (65), Expect = 2.0 Identities = 18/66 (27%), Positives = 34/66 (51%) Frame = -2 Query: 201 SSKCRTSWSKGPDATDSALSPLQAIASYLFLVKDTWNTAESSSTSPATLLSILPTTTSAD 22 S+ S ++ +A +A + +QA+ + +D T +SST P + + PTTT+ Sbjct: 96 SATFEESSTETSEAFSTATATIQAVQTSASATQDDVTTTLTSSTQPTS--TTTPTTTTTS 153 Query: 21 PNSYTT 4 P + T+ Sbjct: 154 PTTTTS 159
>YIQ9_YEAST (P40442) Hypothetical protein YIL169C precursor| Length = 995 Score = 29.3 bits (64), Expect = 2.6 Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 3/68 (4%) Frame = -2 Query: 195 KCRTSWSKGPDATDSALSPLQAIASYLFLVKDTWNTAESSSTSPATLLSILPTTTSA--- 25 K +T S+ P+AT + +SP + T + + S T+ S P TSA Sbjct: 812 KTKTVTSEAPEATTTTVSPKTYTTA-------TVTQCDDNGCSTKTVTSECPEETSATTT 864 Query: 24 DPNSYTTI 1 P SYTT+ Sbjct: 865 SPKSYTTV 872
>DAN4_YEAST (P47179) Cell wall protein DAN4 precursor| Length = 1161 Score = 28.9 bits (63), Expect = 3.4 Identities = 19/53 (35%), Positives = 27/53 (50%) Frame = -2 Query: 162 ATDSALSPLQAIASYLFLVKDTWNTAESSSTSPATLLSILPTTTSADPNSYTT 4 A SALS I + + T T S+ST+P T ++ +TTS P + TT Sbjct: 107 AISSALSK-DGIYTAIPTSTSTTTTKSSTSTTPTTTITSTTSTTSTTPTTSTT 158 Score = 27.7 bits (60), Expect = 7.5 Identities = 14/34 (41%), Positives = 19/34 (55%) Frame = -2 Query: 105 KDTWNTAESSSTSPATLLSILPTTTSADPNSYTT 4 K T T S+ST+P T + +TTS P + TT Sbjct: 245 KSTTPTTSSTSTTPTTSTTPTTSTTSTAPTTSTT 278
>TRPG_PICAN (P09575) Anthranilate synthase component 2 (EC 4.1.3.27)| (Anthranilate synthase component II) [Includes: Glutamine amidotransferase; Indole-3-glycerol phosphate synthase (EC 4.1.1.48) (PRAI)] (Fragment) Length = 367 Score = 28.9 bits (63), Expect = 3.4 Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 5/41 (12%) Frame = -3 Query: 266 FHPQTITA*KSHLM-----NVIGNFWHLPSAGLVGQKDQML 159 FHP++I + HLM NV G +W + G +K+ +L Sbjct: 174 FHPESILTEEGHLMIQNILNVSGGYWEENANGAAQRKESIL 214
>MUC5A_HUMAN (P98088) Mucin-5AC (Mucin 5 subtype AC, tracheobronchial)| (Tracheobronchial mucin) (TBM) (Major airway glycoprotein) (Fragment) Length = 1233 Score = 28.5 bits (62), Expect = 4.4 Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 2/91 (2%) Frame = -2 Query: 270 PFPSPDNNSLKEPLDERDWKFLASSKCRTSWSKGPDATDSALSPLQAIASYLFLVKDTWN 91 P P P ++ P +S S + GP T S P+ ++ T + Sbjct: 60 PSPVPTTSTTSAPTTS------TTSASTASTTSGPGTTPS---PVPTTSTTSAPTTSTTS 110 Query: 90 TAESSSTS-PATLLSILPTT-TSADPNSYTT 4 + +S+TS P T LS +PTT T++ P + TT Sbjct: 111 ASTASTTSGPGTSLSPVPTTSTTSAPTTSTT 141
>CORA_HPBDW (P17191) Core antigen| Length = 305 Score = 28.5 bits (62), Expect = 4.4 Identities = 12/50 (24%), Positives = 24/50 (48%) Frame = -2 Query: 159 TDSALSPLQAIASYLFLVKDTWNTAESSSTSPATLLSILPTTTSADPNSY 10 +DS + ++ L++D W T + +L +++P TT+ P Y Sbjct: 83 SDSIKKHVLIATHFVDLIEDFWQTTQGMHEIAESLRAVIPPTTAPVPTGY 132
>CORA_HPBDC (P30027) Core antigen| Length = 305 Score = 28.5 bits (62), Expect = 4.4 Identities = 12/50 (24%), Positives = 24/50 (48%) Frame = -2 Query: 159 TDSALSPLQAIASYLFLVKDTWNTAESSSTSPATLLSILPTTTSADPNSY 10 +DS + ++ L++D W T + +L +++P TT+ P Y Sbjct: 83 SDSIKKHVLIATHFVDLIEDFWQTTQGMHEIAESLRAVIPPTTAPVPTGY 132
>CORA_HPBDB (P17190) Core antigen| Length = 305 Score = 28.5 bits (62), Expect = 4.4 Identities = 12/50 (24%), Positives = 24/50 (48%) Frame = -2 Query: 159 TDSALSPLQAIASYLFLVKDTWNTAESSSTSPATLLSILPTTTSADPNSY 10 +DS + ++ L++D W T + +L +++P TT+ P Y Sbjct: 83 SDSIKKHVLIATHFVDLIEDFWQTTQGMHEIAESLRAVIPPTTAPVPTGY 132
>TPIS_HELVI (P55275) Triosephosphate isomerase (EC 5.3.1.1) (TIM)| (Triose-phosphate isomerase) (Fragment) Length = 215 Score = 28.1 bits (61), Expect = 5.8 Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 1/59 (1%) Frame = +2 Query: 14 ELGSALVVVGKMERRVAGDVELDSAVFQVS-LTKNRYEAIACNGESAESVASGPFDQLV 187 ++G+ V++G ERR + D +V+ +N + IAC GE+ E +G +++V Sbjct: 72 DIGANWVILGHSERRTIFGEKDDLVAEKVAHALENGLKVIACIGETLEEREAGKTEEVV 130
>CHHA2_BOMMO (P05687) Chorion class high-cysteine HCA protein 12 precursor| (HC-A.12) Length = 124 Score = 28.1 bits (61), Expect = 5.8 Identities = 11/23 (47%), Positives = 11/23 (47%) Frame = +1 Query: 4 CSIGVGVCACSCGQNGEESCWRR 72 C G G C C CG G C RR Sbjct: 98 CGCGCGGCGCGCGGCGGCGCGRR 120
>CP21A_CANFA (Q8WNW0) Cytochrome P450 21 (EC 1.14.99.10) (Cytochrome P450 XXI)| (Steroid 21-hydroxylase) (21-OHase) (P450-C21) (P-450c21) Length = 492 Score = 27.7 bits (60), Expect = 7.5 Identities = 11/30 (36%), Positives = 18/30 (60%) Frame = -3 Query: 98 LGTLQNQAPRRQQLSSPFCPQLQAQTPTPI 9 LG + P +QL+ FC +++AQ TP+ Sbjct: 129 LGIRSSMEPLVEQLTQEFCERMRAQAGTPV 158
>CP21A_MOUSE (P03940) Cytochrome P450 21 (EC 1.14.99.10) (Cytochrome P450 XXI)| (Steroid 21-hydroxylase) (21-OHase) (P450-C21) (P-450c21) Length = 487 Score = 27.7 bits (60), Expect = 7.5 Identities = 11/30 (36%), Positives = 18/30 (60%) Frame = -3 Query: 98 LGTLQNQAPRRQQLSSPFCPQLQAQTPTPI 9 LG + P +QL+ FC +++AQ TP+ Sbjct: 126 LGMRDSMEPLIEQLTQEFCERMRAQAGTPV 155
>ANC2_CAEEL (P34514) Anaphase-promoting complex subunit 2 (APC2) (Cyclosome| subunit 2) Length = 728 Score = 27.7 bits (60), Expect = 7.5 Identities = 11/25 (44%), Positives = 16/25 (64%) Frame = -2 Query: 156 DSALSPLQAIASYLFLVKDTWNTAE 82 D + + A+ +LFL K+TW TAE Sbjct: 556 DRTIPNMYALLLFLFLEKETWTTAE 580
>PBPA_STRR6 (Q8DR59) Penicillin-binding protein 1A (PBP-1A) (Exported protein| 2) Length = 719 Score = 27.7 bits (60), Expect = 7.5 Identities = 23/89 (25%), Positives = 48/89 (53%), Gaps = 4/89 (4%) Frame = -2 Query: 261 SPDNNSLKEPLDERDWKFLASSKCRTSWS----KGPDATDSALSPLQAIASYLFLVKDTW 94 +P++ ++ E L R+ +F+ + R++WS + P +T+S+ S + Sbjct: 630 NPEDWNIPEGL-YRNGEFVFKNGARSTWSSPAPQQPPSTESSSSSSDS------------ 676 Query: 93 NTAESSSTSPATLLSILPTTTSADPNSYT 7 +T++SSST+P+T +T+ +PN+ T Sbjct: 677 STSQSSSTTPST-----NNSTTTNPNNNT 700
>CORA_HPBDU (P03154) Core antigen| Length = 305 Score = 27.7 bits (60), Expect = 7.5 Identities = 12/50 (24%), Positives = 24/50 (48%) Frame = -2 Query: 159 TDSALSPLQAIASYLFLVKDTWNTAESSSTSPATLLSILPTTTSADPNSY 10 +DS + ++ L++D W T + +L +++P TT+ P Y Sbjct: 83 SDSIKKHVLIATHFVDLIEDFWQTTQGMHEIAESLRAVIPPTTTPVPPGY 132
>RENT1_DROME (Q9VYS3) Regulator of nonsense transcripts 1 homolog| Length = 1180 Score = 27.3 bits (59), Expect = 9.8 Identities = 15/58 (25%), Positives = 26/58 (44%), Gaps = 1/58 (1%) Frame = -2 Query: 264 PSPDNNSLKEP-LDERDWKFLASSKCRTSWSKGPDATDSALSPLQAIASYLFLVKDTW 94 P NSLK+ D+ WK L + +C +W + L Q A+ + +++ W Sbjct: 189 PCAAQNSLKDMNWDQEQWKPLIADRCFLAWLVKQPSEQGQLRARQISAAQINKLEELW 246
>NPT1_RAT (Q62795) Renal sodium-dependent phosphate transport protein 1| (Sodium/phosphate cotransporter 1) (Na(+)/PI cotransporter 1) (Renal sodium-phosphate transport protein 1) (Renal Na(+)-dependent phosphate cotransporter 1) (Solute carrier family 18 Length = 465 Score = 27.3 bits (59), Expect = 9.8 Identities = 14/30 (46%), Positives = 18/30 (60%) Frame = -2 Query: 315 ICRNLSKVDFVNQVEPFPSPDNNSLKEPLD 226 +C NL+ V VN+ EP P N S+ E LD Sbjct: 36 VCLNLTMVAMVNKTEP-PHLSNKSVAEMLD 64
>YEF3_YEAST (P32618) Hypothetical 106.1 kDa protein in GLY1-GDA1 intergenic| region Length = 956 Score = 27.3 bits (59), Expect = 9.8 Identities = 13/49 (26%), Positives = 20/49 (40%) Frame = -3 Query: 158 LIRRSPHYKQLPHTCFWSRTLGTLQNQAPRRQQLSSPFCPQLQAQTPTP 12 + RRS H P W+ L + L P P++ A+ P+P Sbjct: 838 ITRRSFHASSPPFNSIWNSNTNQLSPPLEEQYHLDVPVGPKVPAKEPSP 886
>VGLX_EHV1V (Q6S6W0) Glycoprotein X precursor| Length = 866 Score = 27.3 bits (59), Expect = 9.8 Identities = 25/89 (28%), Positives = 37/89 (41%) Frame = -2 Query: 270 PFPSPDNNSLKEPLDERDWKFLASSKCRTSWSKGPDATDSALSPLQAIASYLFLVKDTWN 91 P SP S P SS TS A S+ +P A ++ T Sbjct: 53 PTTSPPTTSSSPPTSTH-----TSSPSSTSTQSSSTAATSSSAPSTASSTTSI---PTST 104 Query: 90 TAESSSTSPATLLSILPTTTSADPNSYTT 4 + E+++T+P T + PTTT+A P + T Sbjct: 105 STETTTTTP-TASTTTPTTTTAAPTTAAT 132
>VGLX_EHV1B (P28968) Glycoprotein X precursor| Length = 797 Score = 27.3 bits (59), Expect = 9.8 Identities = 25/89 (28%), Positives = 37/89 (41%) Frame = -2 Query: 270 PFPSPDNNSLKEPLDERDWKFLASSKCRTSWSKGPDATDSALSPLQAIASYLFLVKDTWN 91 P SP S P SS TS A S+ +P A ++ T Sbjct: 53 PTTSPPTTSSSPPTSTH-----TSSPSSTSTQSSSTAATSSSAPSTASSTTSI---PTST 104 Query: 90 TAESSSTSPATLLSILPTTTSADPNSYTT 4 + E+++T+P T + PTTT+A P + T Sbjct: 105 STETTTTTP-TASTTTPTTTTAAPTTAAT 132
>FSYA_DROME (P25028) Mitosis initiation protein fs(1)Ya| Length = 696 Score = 27.3 bits (59), Expect = 9.8 Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 6/64 (9%) Frame = -2 Query: 294 VDFVNQVEPFPSPDNNSLKE------PLDERDWKFLASSKCRTSWSKGPDATDSALSPLQ 133 V + EP P+P++N +++ PL +R WK A +K SA +PL+ Sbjct: 252 VSSIYHEEPSPTPESNPVQQQQQQQQPLQQRAWKMGARNKM------------SAATPLR 299 Query: 132 AIAS 121 + S Sbjct: 300 QVMS 303 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 51,457,452 Number of Sequences: 219361 Number of extensions: 1019157 Number of successful extensions: 3288 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 3108 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3275 length of database: 80,573,946 effective HSP length: 83 effective length of database: 62,366,983 effective search space used: 1496807592 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
