>ref|NM_187506.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 924

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 5   cgttctccgcagtcgaagcac 25
           |||||||||||||||||||||
Sbjct: 839 cgttctccgcagtcgaagcac 819

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 5       cgttctccgcagtcgaagcac 25
               |||||||||||||||||||||
Sbjct: 9035900 cgttctccgcagtcgaagcac 9035880

>gb|AC135207.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1261C08,
             complete sequence
          Length = 99910

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 5     cgttctccgcagtcgaagcac 25
             |||||||||||||||||||||
Sbjct: 42936 cgttctccgcagtcgaagcac 42916

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 5        cgttctccgcagtcgaagcac 25
                |||||||||||||||||||||
Sbjct: 11201554 cgttctccgcagtcgaagcac 11201574

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 5       cgttctccgcagtcgaagcac 25
               |||||||||||||||||||||
Sbjct: 9033733 cgttctccgcagtcgaagcac 9033713

>dbj|AP005689.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0042H24
          Length = 186313

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 5     cgttctccgcagtcgaagcac 25
             |||||||||||||||||||||
Sbjct: 36726 cgttctccgcagtcgaagcac 36746

>dbj|AP005685.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBa0004P20
          Length = 160410

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 5      cgttctccgcagtcgaagcac 25
              |||||||||||||||||||||
Sbjct: 160361 cgttctccgcagtcgaagcac 160381

>gb|AC165972.4| Mus musculus BAC clone RP23-87D12 from chromosome 17, complete sequence
          Length = 199737

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 40    ccctttctcccagctccctctccc 63
             |||| |||||||||||||||||||
Sbjct: 92605 ccctctctcccagctccctctccc 92582

>gb|AC145076.8| Mus musculus chromosome 10, clone RP24-528G5, complete sequence
          Length = 224534

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 41     cctttctcccagctccctctcccc 64
              ||||||||||| ||||||||||||
Sbjct: 218299 cctttctcccacctccctctcccc 218322

>gb|AC132384.2| Mus musculus BAC clone RP23-438F16 from chromosome 10, complete
             sequence
          Length = 182097

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 41    cctttctcccagctccctctcccc 64
             ||||||||||| ||||||||||||
Sbjct: 25270 cctttctcccacctccctctcccc 25293

>emb|AL138745.19| Human DNA sequence from clone RP3-331H2 on chromosome Xq25-26.2
             Contains the 5' end of the SMARCA1 gene for SWI/SNF
             related, matrix associated, actin dependent regulator of
             chromatin (subfamily a, member 1), the 5' end of the OCRL
             gene for oculocerebrorenal syndrome of Lowe and  two CpG
             islands, complete sequence
          Length = 69637

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 52    gctccctctccccccgcctacccg 75
             ||||||||||||||||||| ||||
Sbjct: 42214 gctccctctccccccgccttcccg 42191

>gb|AC090436.37| Chlamydomonas reinhardtii clone cr-3h1, complete sequence
          Length = 102653

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 371    cgccgggttcggggctgcgg 390
              ||||||||||||||||||||
Sbjct: 101403 cgccgggttcggggctgcgg 101384

>gb|AC090435.28| Chlamydomonas reinhardtii clone cr-32m22, complete sequence
          Length = 79677

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 371   cgccgggttcggggctgcgg 390
             ||||||||||||||||||||
Sbjct: 28469 cgccgggttcggggctgcgg 28488

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Minus

                                                
Query: 192      gtgatggccg-cggtggcgcccaacgcgagca 222
                |||||||||| ||||||||| |||||||||||
Sbjct: 23026778 gtgatggccgtcggtggcgctcaacgcgagca 23026747

>dbj|AP004571.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0652A05
          Length = 150455

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Minus

                                             
Query: 192   gtgatggccg-cggtggcgcccaacgcgagca 222
             |||||||||| ||||||||| |||||||||||
Sbjct: 93322 gtgatggccgtcggtggcgctcaacgcgagca 93291

>emb|BX640400.4| Mouse DNA sequence from clone RP23-294N21 on chromosome 4, complete
             sequence
          Length = 83148

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 45    tctcccagctccctctcccc 64
             ||||||||||||||||||||
Sbjct: 62630 tctcccagctccctctcccc 62611

>gb|AC164983.2| Mus musculus BAC clone RP23-16J24 from chromosome 17, complete sequence
          Length = 224370

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 40     ccctttctcccagctccctctccc 63
              |||| |||||||||||||||||||
Sbjct: 160697 ccctctctcccagctccctctccc 160674


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,836,729
Number of Sequences: 3902068
Number of extensions: 2836729
Number of successful extensions: 53821
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 53715
Number of HSP's gapped (non-prelim): 108
length of query: 433
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 411
effective length of database: 17,147,199,772
effective search space: 7047499106292
effective search space used: 7047499106292
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)