ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl12a03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BC025467.1| Mus musculus AE binding protein 2, mRNA (cDNA clo... 46 0.086
2gb|AC133098.7| Mus musculus BAC clone RP23-336L12 from chromosom... 46 0.086
3ref|NM_001005605.1| Mus musculus AE binding protein 2 (Aebp2), t... 46 0.086
4dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 44 0.34
5gb|AE004849.1| Pseudomonas aeruginosa PAO1, section 410 of 529 o... 44 0.34
6gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 44 0.34
7dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 44 0.34
8emb|AL669828.13| Mouse DNA sequence from clone RP23-163J20 on ch... 44 0.34
9ref|XM_483075.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.3
10ref|XM_468773.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.3
11ref|NM_186067.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.3
12ref|NM_185761.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.3
13gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 42 1.3
14gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 1.3
15gb|AC137999.2| Oryza sativa chromosome 3 BAC OSJNBa0020H02 genom... 42 1.3
16gb|AC110541.12| Mus musculus chromosome 7, clone RP23-105F19, co... 42 1.3
17emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 42 1.3
18gb|AC092532.17| Papio anubis clone rp41-110d13, complete sequence 42 1.3
19gb|AC105391.1| Homo sapiens BAC clone RP11-311D14 from 4, comple... 42 1.3
20gb|CP000249.1| Frankia sp. CcI3, complete genome 42 1.3
21dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
22dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
23dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
24dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
25dbj|AP004401.5| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
26dbj|AP003825.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
27dbj|AP003770.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
28dbj|AP004620.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
29dbj|AP004557.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
30dbj|AK102353.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.3
31dbj|AK069123.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.3
32emb|BX004834.13| Zebrafish DNA sequence from clone CH211-42E22 i... 42 1.3
33gb|AC004066.1|AC004066 Homo sapiens chromosome 4 clone B353C18 m... 42 1.3
34gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 42 1.3
35gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence 40 5.3
36gb|AC137623.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.3
37gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 40 5.3
38gb|AC108840.13| Mus musculus chromosome 1, clone RP23-348P7, com... 40 5.3
39gb|AC118592.7| Mus musculus chromosome 7, clone RP24-463B5, comp... 40 5.3
40gb|CP000127.1| Nitrosococcus oceani ATCC 19707, complete genome 40 5.3
41gb|AC107685.7| Mus musculus chromosome 19, clone RP24-376I6, com... 40 5.3
42gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 40 5.3
43gb|AC140378.2| Mus musculus BAC clone RP24-84M18 from chromosome... 40 5.3
44ref|XM_848999.1| PREDICTED: Canis familiaris similar to RIC3 pro... 40 5.3
45ref|XM_743108.1| Aspergillus fumigatus Af293 hypothetical protei... 40 5.3
46gb|AC140469.2| Mus musculus BAC clone RP24-396D20 from chromosom... 40 5.3
47gb|AC098723.3| Mus musculus BAC clone RP23-3D10 from 7, complete... 40 5.3
48gb|AY162971.1| Micromonospora chersina dynemicin enediyne iterat... 40 5.3
49gb|AY297428.1| Takifugu rubripes nicotinic acetylcholine recepto... 40 5.3
50emb|Z98885.1|HS522J7 Human DNA sequence from clone RP3-522J7 on ... 40 5.3
51emb|CR555306.1| Azoarcus sp. EbN1 complete genome 40 5.3
52gb|AC165259.2| Mus musculus BAC clone RP23-146P7 from chromosome... 40 5.3
53emb|AL939104.1|SCO939104 Streptomyces coelicolor A3(2) complete ... 40 5.3
54emb|AL662868.15| Mouse DNA sequence from clone RP23-144P24 on ch... 40 5.3
55emb|AL954258.2| Pan troglodytes chromosome 22 clone PTB-146D01 m... 40 5.3
56emb|AJ621740.1| Gallus gallus GMCSF gene for granulocyte-macroph... 40 5.3
57gb|AC118207.13| Mus musculus chromosome 8, clone RP24-215A12, co... 40 5.3
58gb|AE005999.1| Caulobacter crescentus CB15 section 325 of 359 of... 40 5.3
59gb|AC152174.15| Gasterosteus aculeatus clone ch213-202d23, compl... 40 5.3
60gb|AC068924.11| Oryza sativa chromosome 10 BAC OSJNBa0026L12 gen... 40 5.3
61dbj|AB041960.1| TT virus DNA, complete genome, isolate:So-TTV2 40 5.3
62dbj|AK015629.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 5.3
63dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
64dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
65gb|AF546156.1| Micromonospora chersinia UnbL (unbL), UnbV (unbV)... 40 5.3
66gb|AF151965.1|AF151965 Pseudomonas putida strain KT2440 proline ... 40 5.3
67emb|AL714028.16| Mouse DNA sequence from clone RP23-139B20 on ch... 40 5.3
68gb|AF153207.1|AF153207 Pseudomonas putida proline dehydrogenase ... 40 5.3
69dbj|AK070291.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.3
70dbj|AK067277.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.3
71gb|AY109356.1| Zea mays CL604_1 mRNA sequence 40 5.3
72emb|CT010447.23| Mouse DNA sequence from clone RP23-15K11 on chr... 40 5.3
73gb|AE015451.1| Pseudomonas putida KT2440 complete genome 40 5.3
74gb|AC156624.1| Ornithorhynchus anatinus clone OA_Bb-193E18, comp... 40 5.3
75gb|AC109168.10| Mus musculus chromosome 19, clone RP23-480L24, c... 40 5.3
76gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.3
77gb|AC171735.1| Lycopersicon esculentum chromosome 11 clone C11HB... 40 5.3
78gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.3 
>gb|BC025467.1| Mus musculus AE binding protein 2, mRNA (cDNA clone IMAGE:5351959)
          Length = 3752

 Score = 46.1 bits (23), Expect = 0.086
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 268 cgccatggccgccgcgctcgccg 290
           |||||||||||||||||||||||
Sbjct: 201 cgccatggccgccgcgctcgccg 223
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>gb|AC133098.7| Mus musculus BAC clone RP23-336L12 from chromosome 6, complete sequence
          Length = 182955

 Score = 46.1 bits (23), Expect = 0.086
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 268   cgccatggccgccgcgctcgccg 290
             |||||||||||||||||||||||
Sbjct: 30404 cgccatggccgccgcgctcgccg 30426
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>ref|NM_001005605.1| Mus musculus AE binding protein 2 (Aebp2), transcript variant 1,
           mRNA
          Length = 6192

 Score = 46.1 bits (23), Expect = 0.086
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 268 cgccatggccgccgcgctcgccg 290
           |||||||||||||||||||||||
Sbjct: 3   cgccatggccgccgcgctcgccg 25
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 267     gcgccatggccgccgcgctcgc 288
               ||||||||||||||||||||||
Sbjct: 7432000 gcgccatggccgccgcgctcgc 7431979



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 31      tccttccacggcctcctcgt 50
               ||||||||||||||||||||
Sbjct: 3271670 tccttccacggcctcctcgt 3271651
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>gb|AE004849.1| Pseudomonas aeruginosa PAO1, section 410 of 529 of the complete
            genome
          Length = 10113

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 346  ggcgtggggcagcagcaggacg 367
            ||||||||||||||||||||||
Sbjct: 5963 ggcgtggggcagcagcaggacg 5984
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 268     cgccatggccgccgcgctcgccgcgg 293
               |||| |||||||||||||||||||||
Sbjct: 3521119 cgccctggccgccgcgctcgccgcgg 3521094



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 273     tggccgccgcgctcgccgcgg 293
               |||||||||||||||||||||
Sbjct: 2875197 tggccgccgcgctcgccgcgg 2875177



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 273     tggccgccgcgctcgccgcgg 293
               |||||||||||||||||||||
Sbjct: 2770455 tggccgccgcgctcgccgcgg 2770435



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 274    ggccgccgcgctcgccgcgg 293
              ||||||||||||||||||||
Sbjct: 675713 ggccgccgcgctcgccgcgg 675732
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 266     ggcgccatggccgccgcgctcgccgc 291
               ||||||| ||||||||||||||||||
Sbjct: 1314991 ggcgccaaggccgccgcgctcgccgc 1315016



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 273     tggccgccgcgctcgccgcgg 293
               |||||||||||||||||||||
Sbjct: 3497493 tggccgccgcgctcgccgcgg 3497513
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>emb|AL669828.13| Mouse DNA sequence from clone RP23-163J20 on chromosome 2, complete
              sequence
          Length = 248940

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 22     tcttcctcctccttccacggcc 43
              ||||||||||||||||||||||
Sbjct: 165987 tcttcctcctccttccacggcc 166008
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>ref|XM_483075.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1392

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 269  gccatggccgccgcgctcgccgcgg 293
            |||| ||||||||||||||||||||
Sbjct: 1267 gccaaggccgccgcgctcgccgcgg 1291
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>ref|XM_468773.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3546

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                               
Query: 35 tccacggcctcctcgtgcatccctgaacctcccagaa 71
          |||||| ||||||||| |  |||||||||||||||||
Sbjct: 9  tccacgccctcctcgttcccccctgaacctcccagaa 45
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>ref|NM_186067.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 921

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 267 gcgccatggccgccgcgctcgccgcggac 295
           ||||||||||||||| ||||| |||||||
Sbjct: 236 gcgccatggccgccgagctcggcgcggac 264
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>ref|NM_185761.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1368

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 263 ccgggcgccatggccgccgcgctcgccgc 291
           ||||||||||| | |||||||||||||||
Sbjct: 205 ccgggcgccatcgacgccgcgctcgccgc 233
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 273    tggccgccgcgctcgccgcgg 293
              |||||||||||||||||||||
Sbjct: 737887 tggccgccgcgctcgccgcgg 737907
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                     
Query: 35       tccacggcctcctcgtgcatccctgaacctcccagaa 71
                |||||| ||||||||| |  |||||||||||||||||
Sbjct: 17644460 tccacgccctcctcgttcccccctgaacctcccagaa 17644496
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>gb|AC137999.2| Oryza sativa chromosome 3 BAC OSJNBa0020H02 genomic sequence, complete
             sequence
          Length = 97152

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                  
Query: 35    tccacggcctcctcgtgcatccctgaacctcccagaa 71
             |||||| ||||||||| |  |||||||||||||||||
Sbjct: 10617 tccacgccctcctcgttcccccctgaacctcccagaa 10581
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>gb|AC110541.12| Mus musculus chromosome 7, clone RP23-105F19, complete sequence
          Length = 213499

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 1      acccccacccccacccaatca 21
              |||||||||||||||||||||
Sbjct: 136960 acccccacccccacccaatca 136980
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 273     tggccgccgcgctcgccgcgg 293
               |||||||||||||||||||||
Sbjct: 1163683 tggccgccgcgctcgccgcgg 1163703



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 274    ggccgccgcgctcgccgcgg 293
              ||||||||||||||||||||
Sbjct: 528220 ggccgccgcgctcgccgcgg 528201
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>gb|AC092532.17| Papio anubis clone rp41-110d13, complete sequence
          Length = 157944

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 3     ccccacccccacccaatcatcttcc 27
             ||||||||||||||||||| |||||
Sbjct: 41344 ccccacccccacccaatcagcttcc 41320
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>gb|AC105391.1| Homo sapiens BAC clone RP11-311D14 from 4, complete sequence
          Length = 143498

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 2   cccccacccccacccaatcat 22
           |||||||||||||||||||||
Sbjct: 539 cccccacccccacccaatcat 559
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 274     ggccgccgcgctcgccgcggacctc 298
               |||||||| ||||||||||||||||
Sbjct: 1390101 ggccgccgtgctcgccgcggacctc 1390125



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 275     gccgccgcgctcgccgcgga 294
               ||||||||||||||||||||
Sbjct: 5226162 gccgccgcgctcgccgcgga 5226181
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 269      gccatggccgccgcgctcgccgcgg 293
                |||| ||||||||||||||||||||
Sbjct: 24160670 gccaaggccgccgcgctcgccgcgg 24160646
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 267      gcgccatggccgccgcgctcgccgcggac 295
                ||||||||||||||| ||||| |||||||
Sbjct: 28004605 gcgccatggccgccgagctcggcgcggac 28004633



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 263      ccgggcgccatggccgccgcgctcgccgc 291
                ||||||||||| | |||||||||||||||
Sbjct: 21783619 ccgggcgccatcgacgccgcgctcgccgc 21783647
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 275      gccgccgcgctcgccgcggac 295
                |||||||||||||||||||||
Sbjct: 28566610 gccgccgcgctcgccgcggac 28566590
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                     
Query: 35       tccacggcctcctcgtgcatccctgaacctcccagaa 71
                |||||| ||||||||| |  |||||||||||||||||
Sbjct: 17638001 tccacgccctcctcgttcccccctgaacctcccagaa 17638037
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>dbj|AP004401.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0534A03
          Length = 153170

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 263    ccgggcgccatggccgccgcgctcgccgc 291
              ||||||||||| | |||||||||||||||
Sbjct: 100802 ccgggcgccatcgacgccgcgctcgccgc 100830
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>dbj|AP003825.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1343_D04
          Length = 143407

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 267   gcgccatggccgccgcgctcgccgcggac 295
             ||||||||||||||| ||||| |||||||
Sbjct: 93939 gcgccatggccgccgagctcggcgcggac 93967
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>dbj|AP003770.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0550B04
          Length = 150131

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 275   gccgccgcgctcgccgcggac 295
             |||||||||||||||||||||
Sbjct: 58088 gccgccgcgctcgccgcggac 58068
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>dbj|AP004620.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0605H02
          Length = 175547

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 269   gccatggccgccgcgctcgccgcgg 293
             |||| ||||||||||||||||||||
Sbjct: 27009 gccaaggccgccgcgctcgccgcgg 26985
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>dbj|AP004557.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0028A08
          Length = 150818

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 269    gccatggccgccgcgctcgccgcgg 293
              |||| ||||||||||||||||||||
Sbjct: 114156 gccaaggccgccgcgctcgccgcgg 114132
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>dbj|AK102353.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033091F07, full
           insert sequence
          Length = 1613

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 275 gccgccgcgctcgccgcggac 295
           |||||||||||||||||||||
Sbjct: 256 gccgccgcgctcgccgcggac 276
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>dbj|AK069123.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023007C17,
          full insert sequence
          Length = 3303

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                               
Query: 35 tccacggcctcctcgtgcatccctgaacctcccagaa 71
          |||||| ||||||||| |  |||||||||||||||||
Sbjct: 9  tccacgccctcctcgttcccccctgaacctcccagaa 45
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>emb|BX004834.13| Zebrafish DNA sequence from clone CH211-42E22 in linkage group 18,
             complete sequence
          Length = 188895

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 2     cccccacccccacccaatcatcttcctcctcct 34
             ||||| ||||||||||||| || ||||||||||
Sbjct: 30432 cccccccccccacccaatcctcctcctcctcct 30400
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>gb|AC004066.1|AC004066 Homo sapiens chromosome 4 clone B353C18 map 4q25, complete sequence
          Length = 139877

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 2      cccccacccccacccaatcat 22
              |||||||||||||||||||||
Sbjct: 138416 cccccacccccacccaatcat 138436
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>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 274     ggccgccgcgctcgccgcgga 294
               |||||||||||||||||||||
Sbjct: 1382155 ggccgccgcgctcgccgcgga 1382135
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>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 274    ggccgccgcgctcgccgcgg 293
              ||||||||||||||||||||
Sbjct: 542327 ggccgccgcgctcgccgcgg 542346
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>gb|AC137623.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0426G01,
             complete sequence
          Length = 173074

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 272   atggccgccgcgctcgccgc 291
             ||||||||||||||||||||
Sbjct: 67232 atggccgccgcgctcgccgc 67213
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>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 268     cgccatggccgccgcgctcgccgc 291
               |||| |||||||||||||||||||
Sbjct: 1442174 cgccctggccgccgcgctcgccgc 1442197
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>gb|AC108840.13| Mus musculus chromosome 1, clone RP23-348P7, complete sequence
          Length = 209336

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     acccccacccccacccaatc 20
             ||||||||||||||||||||
Sbjct: 77252 acccccacccccacccaatc 77233
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>gb|AC118592.7| Mus musculus chromosome 7, clone RP24-463B5, complete sequence
          Length = 134114

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     acccccacccccacccaatc 20
             ||||||||||||||||||||
Sbjct: 87073 acccccacccccacccaatc 87054
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>gb|CP000127.1| Nitrosococcus oceani ATCC 19707, complete genome
          Length = 3481691

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 88     gccggtgacagcgcccgccg 107
              ||||||||||||||||||||
Sbjct: 953935 gccggtgacagcgcccgccg 953916
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>gb|AC107685.7| Mus musculus chromosome 19, clone RP24-376I6, complete sequence
          Length = 175566

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 3     ccccacccccacccaatcatcttcctcctcct 34
             |||||||||||||| ||  |||||||||||||
Sbjct: 51865 ccccacccccaccccattctcttcctcctcct 51896
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 274    ggccgccgcgctcgccgcgg 293
              ||||||||||||||||||||
Sbjct: 719575 ggccgccgcgctcgccgcgg 719556
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>gb|AC140378.2| Mus musculus BAC clone RP24-84M18 from chromosome 19, complete sequence
          Length = 194681

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 3      ccccacccccacccaatcatcttcctcctcct 34
              |||||||||||||| ||  |||||||||||||
Sbjct: 118736 ccccacccccaccccattctcttcctcctcct 118767
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>ref|XM_848999.1| PREDICTED: Canis familiaris similar to RIC3 protein (LOC611343),
           mRNA
          Length = 1163

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 268 cgccatggccgccgcgctcgccgc 291
           ||||||||||||||| ||||||||
Sbjct: 29  cgccatggccgccgccctcgccgc 6
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>ref|XM_743108.1| Aspergillus fumigatus Af293 hypothetical protein (Afu5g01410)
           partial mRNA
          Length = 1704

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 126 ctttttataccaccatccat 145
           ||||||||||||||||||||
Sbjct: 471 ctttttataccaccatccat 452
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>gb|AC140469.2| Mus musculus BAC clone RP24-396D20 from chromosome 19, complete
             sequence
          Length = 180376

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     acccccacccccacccaatc 20
             ||||||||||||||||||||
Sbjct: 73566 acccccacccccacccaatc 73585
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>gb|AC098723.3| Mus musculus BAC clone RP23-3D10 from 7, complete sequence
          Length = 227968

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 1    acccccacccccacccaatc 20
            ||||||||||||||||||||
Sbjct: 5986 acccccacccccacccaatc 6005
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>gb|AY162971.1| Micromonospora chersina dynemicin enediyne iterative type I
            polyketide synthase gene locus, partial sequence
          Length = 6653

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 269  gccatggccgccgcgctcgccgcg 292
            |||||| |||||||||||||||||
Sbjct: 3324 gccatgcccgccgcgctcgccgcg 3301
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>gb|AY297428.1| Takifugu rubripes nicotinic acetylcholine receptor beta 2 subunit
            mRNA, partial cds
          Length = 1578

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 30   ctccttccacggcctcctcg 49
            ||||||||||||||||||||
Sbjct: 1378 ctccttccacggcctcctcg 1359
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>emb|Z98885.1|HS522J7 Human DNA sequence from clone RP3-522J7 on chromosome 22q13.3, complete
             sequence
          Length = 84364

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 25    tcctcctccttccacggcctcctc 48
             |||||||||||||||| |||||||
Sbjct: 66261 tcctcctccttccacgtcctcctc 66284
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>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 279     ccgcgctcgccgcggacctc 298
               ||||||||||||||||||||
Sbjct: 2279351 ccgcgctcgccgcggacctc 2279370
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>gb|AC165259.2| Mus musculus BAC clone RP23-146P7 from chromosome 17, complete sequence
          Length = 252045

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 3     ccccacccccacccaatcatcttcctcctcct 34
             |||||||||||||||  | |||||||||||||
Sbjct: 79472 ccccacccccacccacacctcttcctcctcct 79441
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>emb|AL939104.1|SCO939104 Streptomyces coelicolor A3(2) complete genome; segment 1/29
          Length = 299050

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 268    cgccatggccgccgcgctcg 287
              ||||||||||||||||||||
Sbjct: 203145 cgccatggccgccgcgctcg 203126
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>emb|AL662868.15| Mouse DNA sequence from clone RP23-144P24 on chromosome 11 Contains
             three novel genes, the 5' end of the Galnt9 gene for
             UDP-N-acetyl-alpha-D-galactosamine: polypeptide
             N-acetylgalactosaminyltransferase 9 and a CpG island,
             complete sequence
          Length = 198647

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 29    cctccttccacggcctcctc 48
             ||||||||||||||||||||
Sbjct: 31339 cctccttccacggcctcctc 31320
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>emb|AL954258.2| Pan troglodytes chromosome 22 clone PTB-146D01 map 22q22.3, complete
              sequence
          Length = 185080

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 346    ggcgtggggcagcagcaggacggc 369
              ||||||||| ||||||||||||||
Sbjct: 153362 ggcgtgggggagcagcaggacggc 153385
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>emb|AJ621740.1| Gallus gallus GMCSF gene for granulocyte-macrophage colony-stimulating
             factor and IL3 gene for interleukin-3, BAC bCHORI92M14
             clone, contig 1
          Length = 54760

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 105   ccgtccgtccgtccactcca 124
             ||||||||||||||||||||
Sbjct: 16844 ccgtccgtccgtccactcca 16863
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>gb|AC118207.13| Mus musculus chromosome 8, clone RP24-215A12, complete sequence
          Length = 187453

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     acccccacccccacccaatc 20
             ||||||||||||||||||||
Sbjct: 70532 acccccacccccacccaatc 70513
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>gb|AE005999.1| Caulobacter crescentus CB15 section 325 of 359 of the complete genome
          Length = 12079

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 268  cgccatggccgccgcgctcgccgc 291
            ||||||||||| ||||||||||||
Sbjct: 5516 cgccatggccgacgcgctcgccgc 5493
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>gb|AC152174.15| Gasterosteus aculeatus clone ch213-202d23, complete sequence
          Length = 174464

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 103   cgccgtccgtccgtccactc 122
             ||||||||||||||||||||
Sbjct: 66426 cgccgtccgtccgtccactc 66445
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>gb|AC068924.11| Oryza sativa chromosome 10 BAC OSJNBa0026L12 genomic sequence, complete
             sequence
          Length = 152172

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 268   cgccatggccgccgcgctcgccgc 291
             |||||||||||||||| |||||||
Sbjct: 53140 cgccatggccgccgcggtcgccgc 53163
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>dbj|AB041960.1| TT virus DNA, complete genome, isolate:So-TTV2
          Length = 3371

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 272 atggccgccgcgctcgccgc 291
           ||||||||||||||||||||
Sbjct: 831 atggccgccgcgctcgccgc 850
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>dbj|AK015629.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:4930486A15 product:unclassifiable, full
           insert sequence
          Length = 1097

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 29  cctccttccacggcctcctc 48
           ||||||||||||||||||||
Sbjct: 905 cctccttccacggcctcctc 924
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 268      cgccatggccgccgcgctcgccgc 291
                |||||||||||||||| |||||||
Sbjct: 19323241 cgccatggccgccgcggtcgccgc 19323218
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 272      atggccgccgcgctcgccgc 291
                ||||||||||||||||||||
Sbjct: 20395487 atggccgccgcgctcgccgc 20395468



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 271     catggccgccgcgctcgccg 290
               ||||||||||||||||||||
Sbjct: 4813244 catggccgccgcgctcgccg 4813263
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>gb|AF546156.1| Micromonospora chersinia UnbL (unbL), UnbV (unbV), UnbU (unbU), PksE
            (pksE), and TebC (tebC) genes, complete cds
          Length = 10136

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 269  gccatggccgccgcgctcgccgcg 292
            |||||| |||||||||||||||||
Sbjct: 6555 gccatgcccgccgcgctcgccgcg 6532
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>gb|AF151965.1|AF151965 Pseudomonas putida strain KT2440 proline dehydrogenase (putA) gene,
            complete cds
          Length = 5162

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 355  cagcagcaggacggcgaagg 374
            ||||||||||||||||||||
Sbjct: 3704 cagcagcaggacggcgaagg 3723
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>emb|AL714028.16| Mouse DNA sequence from clone RP23-139B20 on chromosome 4, complete
             sequence
          Length = 117560

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 1     acccccacccccacccaatcatct 24
             ||||||||||||||||| ||||||
Sbjct: 69067 acccccacccccacccagtcatct 69044
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>gb|AF153207.1|AF153207 Pseudomonas putida proline dehydrogenase (putA) and proline permease
            (putP) genes, complete cds
          Length = 8660

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 355  cagcagcaggacggcgaagg 374
            ||||||||||||||||||||
Sbjct: 1459 cagcagcaggacggcgaagg 1440
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>dbj|AK070291.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023052I10, full
           insert sequence
          Length = 1849

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 268 cgccatggccgccgcgctcgccgc 291
           |||||||||||||||| |||||||
Sbjct: 51  cgccatggccgccgcggtcgccgc 74
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>dbj|AK067277.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013099K07, full
           insert sequence
          Length = 1626

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 272 atggccgccgcgctcgccgc 291
           ||||||||||||||||||||
Sbjct: 69  atggccgccgcgctcgccgc 88
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>gb|AY109356.1| Zea mays CL604_1 mRNA sequence
          Length = 1502

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 268  cgccatggccgccgcgctcg 287
            ||||||||||||||||||||
Sbjct: 1357 cgccatggccgccgcgctcg 1338
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>emb|CT010447.23| Mouse DNA sequence from clone RP23-15K11 on chromosome 13, complete
             sequence
          Length = 239180

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 4     cccacccccacccaatcatcttcctcctcctt 35
             |||||||||||||  || ||||||||||||||
Sbjct: 60853 cccacccccaccctgtcctcttcctcctcctt 60822
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>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 355     cagcagcaggacggcgaagg 374
               ||||||||||||||||||||
Sbjct: 5633817 cagcagcaggacggcgaagg 5633836



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 259     ggcaccgggcgccatggccg 278
               ||||||||||||||||||||
Sbjct: 3177335 ggcaccgggcgccatggccg 3177354
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>gb|AC156624.1| Ornithorhynchus anatinus clone OA_Bb-193E18, complete sequence
          Length = 162554

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 11    ccacccaatcatcttcctcctcct 34
             |||||||| |||||||||||||||
Sbjct: 45946 ccacccaaacatcttcctcctcct 45923
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>gb|AC109168.10| Mus musculus chromosome 19, clone RP23-480L24, complete sequence
          Length = 190309

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 1      acccccacccccacccaatc 20
              ||||||||||||||||||||
Sbjct: 178045 acccccacccccacccaatc 178026
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 268      cgccatggccgccgcgctcgccgc 291
                |||||||||||||||| |||||||
Sbjct: 19334517 cgccatggccgccgcggtcgccgc 19334494
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>gb|AC171735.1| Lycopersicon esculentum chromosome 11 clone C11HBa0119D16, complete
            sequence
          Length = 125830

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 15   ccaatcatcttcctcctcct 34
            ||||||||||||||||||||
Sbjct: 6959 ccaatcatcttcctcctcct 6978
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>gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0453H11,
             complete sequence
          Length = 187956

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 271   catggccgccgcgctcgccg 290
             ||||||||||||||||||||
Sbjct: 85652 catggccgccgcgctcgccg 85671


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,358,810
Number of Sequences: 3902068
Number of extensions: 3358810
Number of successful extensions: 157003
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 83
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 153537
Number of HSP's gapped (non-prelim): 3466
length of query: 395
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 373
effective length of database: 17,147,199,772
effective search space: 6395905514956
effective search space used: 6395905514956
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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