Clone Information

BLAST Search Result

Clone Name	bastl12a02
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	CNOT3_MOUSE (Q8K0V4) CCR4-NOT transcription complex subunit 3 (C...	113	1e-25
2	CNOT3_HUMAN (O75175) CCR4-NOT transcription complex subunit 3 (C...	113	1e-25
3	NOT5_YEAST (Q12514) General negative regulator of transcription ...	88	5e-18
4	NOT3_YEAST (P06102) General negative regulator of transcription ...	83	2e-16
5	AGO2_DROME (Q9VUQ5) Argonaute 2 protein	34	0.11
6	Y548_METJA (Q57968) Hypothetical protein MJ0548	33	0.18
7	CWLO_BACLD (Q65NQ9) Peptidoglycan DL-endopeptidase cwlO precurso...	33	0.24
8	KIF1C_RAT (O35787) Kinesin-like protein KIF1C (Kinesin-like prot...	32	0.41
9	DDX51_MOUSE (Q6P9R1) ATP-dependent RNA helicase DDX51 (EC 3.6.1....	32	0.41
10	KIF1C_MOUSE (O35071) Kinesin-like protein KIF1C	32	0.41
11	ILVC_XYLFT (Q87CM2) Ketol-acid reductoisomerase (EC 1.1.1.86) (A...	32	0.53
12	CY24A_MOUSE (Q61462) Cytochrome b-245 light chain (p22 phagocyte...	32	0.53
13	DNAK_LACLA (P0A3J0) Chaperone protein dnaK (Heat shock protein 7...	31	0.91
14	ILVC_XYLFA (Q9PCF9) Ketol-acid reductoisomerase (EC 1.1.1.86) (A...	31	0.91
15	SPTN5_HUMAN (Q9NRC6) Spectrin beta chain, brain 4 (Spectrin, non...	31	0.91
16	SRCA_MOUSE (Q7TQ48) Sarcalumenin precursor	30	1.2
17	CASC5_HUMAN (Q8NG31) Protein CASC5 (Cancer susceptibility candid...	30	1.2
18	KIF1C_HUMAN (O43896) Kinesin-like protein KIF1C	30	1.2
19	SPEE_SULTO (Q975S5) Probable spermidine synthase (EC 2.5.1.16) (...	30	1.2
20	BIP1_TOBAC (Q03681) Luminal-binding protein 1 (BiP 1) (78 kDa gl...	30	1.2
21	DNAK_TETHA (Q93R27) Chaperone protein dnaK (Heat shock protein 7...	30	1.2
22	BIP2_TOBAC (Q03682) Luminal-binding protein 2 (BiP 2) (78 kDa gl...	30	1.2
23	INLB_LISMO (P25147) Internalin B precursor	30	1.2
24	RF1_ENTFA (Q831F6) Peptide chain release factor 1 (RF-1)	30	1.5
25	DNAK_LACLC (P0A3J1) Chaperone protein dnaK (Heat shock protein 7...	30	1.5
26	RF1_LACJO (Q74K25) Peptide chain release factor 1 (RF-1)	30	1.5
27	BIP5_TOBAC (Q03685) Luminal-binding protein 5 precursor (BiP 5) ...	30	1.5
28	BIP8_TOBAC (Q03686) Luminal-binding protein 8 (BiP 8) (78 kDa gl...	30	1.5
29	BIP4_TOBAC (Q03684) Luminal-binding protein 4 precursor (BiP 4) ...	30	1.5
30	DDX46_BRARE (Q4TVV3) Probable ATP-dependent RNA helicase DDX46 (...	30	2.0
31	ANDR_MOUSE (P19091) Androgen receptor (Dihydrotestosterone recep...	30	2.0
32	SYC_CLOTE (Q890M4) Cysteinyl-tRNA synthetase (EC 6.1.1.16) (Cyst...	29	2.6
33	JIP3_DROME (Q9GQF1) JNK-interacting protein 3 (Protein sunday dr...	29	2.6
34	INHA_MOUSE (Q04997) Inhibin alpha chain precursor	29	2.6
35	KLP2_SCHPO (Q9US03) Kinesin-like protein 2	29	2.6
36	CY24A_RAT (Q62737) Cytochrome b-245 light chain (p22 phagocyte B...	29	2.6
37	INHA_RAT (P17490) Inhibin alpha chain precursor	29	3.4
38	SECA_STACA (P47994) Preprotein translocase secA subunit	29	3.4
39	IWS1_ASPFU (Q4WSM6) Transcription factor iws1	29	3.4
40	SSF1_HUMAN (Q9NQ55) Suppressor of SWI4 1 homolog (Ssf-1) (Peter ...	29	3.4
41	EF3_CANAL (P25997) Elongation factor 3 (EF-3)	29	3.4
42	IKBL_HUMAN (Q9UBC1) NF-kappa-B inhibitor-like protein 1 (Inhibit...	28	4.5
43	SUPT3_HUMAN (O75486) Transcription initiation protein SPT3 homol...	28	4.5
44	DNAK_STAES (Q8CP17) Chaperone protein dnaK (Heat shock protein 7...	28	4.5
45	DNAK_STAEQ (Q5HNW6) Chaperone protein dnaK (Heat shock protein 7...	28	4.5
46	NSBP1_MOUSE (Q9JL35) Nucleosome-binding protein 1 (Nucleosome-bi...	28	4.5
47	ERCC6_HUMAN (Q03468) DNA excision repair protein ERCC-6 (EC 3.6....	28	4.5
48	DNAK_LACPL (Q88VM0) Chaperone protein dnaK (Heat shock protein 7...	28	4.5
49	RHO_MICLU (P52154) Transcription termination factor rho (EC 3.6....	28	4.5
50	OST2_HUMAN (Q9Y278) Heparan sulfate glucosamine 3-O-sulfotransfe...	28	5.9
51	ANDR_RAT (P15207) Androgen receptor (Dihydrotestosterone receptor)	28	5.9
52	SH2P1_XENTR (Q6DEU9) SH2 domain-binding protein 1	28	5.9
53	IKBL_MACMU (Q5TM19) NF-kappa-B inhibitor-like protein 1 (Inhibit...	28	5.9
54	RU17_ARATH (Q42404) U1 small nuclear ribonucleoprotein 70 kDa (U...	28	5.9
55	SUBE_BACSU (P16396) Minor extracellular protease epr precursor (...	28	5.9
56	EF3B_YEAST (P53978) Elongation factor 3B (EF-3B) (Translation el...	28	7.7
57	DNAK_DESDG (Q313S2) Chaperone protein dnaK (Heat shock protein 7...	28	7.7
58	BRE1_YEAST (Q07457) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-) (...	28	7.7
59	NUCB1_HUMAN (Q02818) Nucleobindin-1 precursor (CALNUC)	28	7.7
60	INHA_HUMAN (P05111) Inhibin alpha chain precursor	28	7.7
61	DNAK_ENTFA (Q835R7) Chaperone protein dnaK (Heat shock protein 7...	28	7.7
62	VP38_GAHVN (P68348) 38 kDa phosphoprotein (Phosphoprotein pp38)	28	7.7
63	VP38_GAHVG (P68347) 38 kDa phosphoprotein (Phosphoprotein pp38)	28	7.7
64	DYHC_DROME (P37276) Dynein heavy chain, cytosolic (DYHC)	28	7.7
65	CWC25_YARLI (Q6C1V6) Pre-mRNA-splicing factor CWC25	28	7.7
66	MFA1P_CHICK (P55080) Microfibrillar-associated protein 1 (Associ...	28	7.7
67	KLF15_MOUSE (Q9EPW2) Krueppel-like factor 15 (Cardiovascular Kru...	28	7.7
68	DPOL_BPT7 (P00581) DNA polymerase (EC 2.7.7.7) (T7 DNA polymerase)	28	7.7
69	DPOL_BPT3 (P20311) DNA polymerase (EC 2.7.7.7)	28	7.7
70	FYV1_MOUSE (Q9Z1T6) FYVE finger-containing phosphoinositide kina...	28	7.7

>CNOT3_MOUSE (Q8K0V4) CCR4-NOT transcription complex subunit 3 (CCR4-associated|
           factor 3)
          Length = 751

 Score =  113 bits (282), Expect = 1e-25
 Identities = 53/75 (70%), Positives = 63/75 (84%)
 Frame = +1

Query: 79  MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTENANQKEKFEADLKKEIKKLQRYRD 258
           M   RKLQGEIDR LKKV EGV+ F+ IW K+++  NANQKEK+EADLKKEIKKLQR RD
Sbjct: 1   MADKRKLQGEIDRCLKKVSEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD 60

Query: 259 QIKTWIQSSEIEDKK 303
           QIKTW+ S+EI+DK+
Sbjct: 61  QIKTWVASNEIKDKR 75

to top

>CNOT3_HUMAN (O75175) CCR4-NOT transcription complex subunit 3 (CCR4-associated|
           factor 3)
          Length = 753

 Score =  113 bits (282), Expect = 1e-25
 Identities = 53/75 (70%), Positives = 63/75 (84%)
 Frame = +1

Query: 79  MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTENANQKEKFEADLKKEIKKLQRYRD 258
           M   RKLQGEIDR LKKV EGV+ F+ IW K+++  NANQKEK+EADLKKEIKKLQR RD
Sbjct: 1   MADKRKLQGEIDRCLKKVSEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD 60

Query: 259 QIKTWIQSSEIEDKK 303
           QIKTW+ S+EI+DK+
Sbjct: 61  QIKTWVASNEIKDKR 75

to top

>NOT5_YEAST (Q12514) General negative regulator of transcription subunit 5|
          Length = 560

 Score = 88.2 bits (217), Expect = 5e-18
 Identities = 39/76 (51%), Positives = 61/76 (80%), Gaps = 2/76 (2%)
 Frame = +1

Query: 85  ASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTE--NANQKEKFEADLKKEIKKLQRYRD 258
           + RKLQ +ID++LKKV+EG++ FD I+ K   T+  N++ +EK E+DLK+EIKKLQ++RD
Sbjct: 2   SQRKLQQDIDKLLKKVKEGIEDFDDIYEKFQSTDPSNSSHREKLESDLKREIKKLQKHRD 61

Query: 259 QIKTWIQSSEIEDKKA 306
           QIKTW+   +++DK++
Sbjct: 62  QIKTWLSKEDVKDKQS 77

to top

>NOT3_YEAST (P06102) General negative regulator of transcription subunit 3|
          Length = 836

 Score = 82.8 bits (203), Expect = 2e-16
 Identities = 39/73 (53%), Positives = 56/73 (76%), Gaps = 1/73 (1%)
 Frame = +1

Query: 85  ASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYD-TENANQKEKFEADLKKEIKKLQRYRDQ 261
           A RKLQ E+DRV KK+ EG+++F+S + +    T N +QK+K E+DLK+E+KKLQR R+Q
Sbjct: 2   AHRKLQQEVDRVFKKINEGLEIFNSYYERHESCTNNPSQKDKLESDLKREVKKLQRLREQ 61

Query: 262 IKTWIQSSEIEDK 300
           IK+W  S +I+DK
Sbjct: 62  IKSWQSSPDIKDK 74

to top

>AGO2_DROME (Q9VUQ5) Argonaute 2 protein|
          Length = 1214

 Score = 33.9 bits (76), Expect = 0.11
 Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 8/77 (10%)
 Frame = +3

Query: 81  GRQPEAAG-RDRPRAQEGSGGRRRLRQHLEQGLRHR-------ECEPEGEVRGRPQEGDQ 236
           GRQ +  G + RP  Q+  GG ++ RQ  E G + R       + + +G+ + R     Q
Sbjct: 332 GRQGQEGGYQQRPSGQQ-QGGHQQGRQGQEGGYQQRPPGQQPNQTQSQGQYQSRGPPQQQ 390

Query: 237 EAAALPGPDQDLDPVQR 287
           +AA LP P Q    ++R
Sbjct: 391 QAAPLPLPPQPAGSIKR 407



 Score = 30.8 bits (68), Expect = 0.91
 Identities = 27/80 (33%), Positives = 37/80 (46%), Gaps = 5/80 (6%)
 Frame = +3

Query: 81  GRQPEAAG-RDRPRAQEGSGGRRRLRQHLEQGLRHRECEPEGEVRGRPQEGDQEAAA--- 248
           GRQ +  G + RP  Q+  GG ++ RQ  E G + R   P G+ +G  Q+G Q       
Sbjct: 286 GRQGQEGGYQQRPSGQQ-QGGHQQGRQGQEGGYQQR---PSGQQQGGHQQGRQGQEGGYQ 341

Query: 249 -LPGPDQDLDPVQRDRGQEG 305
             P   Q     Q  +GQEG
Sbjct: 342 QRPSGQQQGGHQQGRQGQEG 361



 Score = 30.8 bits (68), Expect = 0.91
 Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
 Frame = +3

Query: 81  GRQPEAAG-RDRPRAQEGSGGRRRLRQHLEQGLRHRECEPEGEVRGRPQEGDQEAAALPG 257
           GRQ +  G + RP  Q+  GG ++ RQ  E G + R   P G+ +G  Q+G Q      G
Sbjct: 217 GRQGQEGGYQQRPSGQQ-QGGHQQGRQGQEGGYQQR---PPGQQQGGHQQGRQ---GQEG 269

Query: 258 PDQDLDPVQRDRGQE 302
             Q   P Q+  G E
Sbjct: 270 GYQQRPPGQQQGGHE 284



 Score = 30.4 bits (67), Expect = 1.2
 Identities = 27/80 (33%), Positives = 37/80 (46%), Gaps = 5/80 (6%)
 Frame = +3

Query: 81  GRQPEAAG-RDRPRAQEGSGGRRRLRQHLEQGLRHRECEPEGEVRGRPQEGDQEAAA--- 248
           GRQ +  G + RP  Q+  GG ++ RQ  E G + R   P G+ +G  Q+G Q       
Sbjct: 171 GRQGQEGGYQQRPSGQQ-QGGHQQGRQGQEGGYQQR---PPGQQQGGHQQGRQGQEGGYQ 226

Query: 249 -LPGPDQDLDPVQRDRGQEG 305
             P   Q     Q  +GQEG
Sbjct: 227 QRPSGQQQGGHQQGRQGQEG 246



 Score = 29.6 bits (65), Expect = 2.0
 Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
 Frame = +3

Query: 81  GRQPEAAG-RDRPRAQEGSGGRRRLRQHLEQGLRHRECEPEGEVRGRPQEGDQEAAALPG 257
           GRQ +  G + RP  Q+  GG ++ RQ  E G + R   P G+ +G  Q+G Q      G
Sbjct: 148 GRQGQEGGYQQRPPGQQ-QGGHQQGRQGQEGGYQQR---PSGQQQGGHQQGRQ---GQEG 200

Query: 258 PDQDLDPVQRDRGQE 302
             Q   P Q+  G +
Sbjct: 201 GYQQRPPGQQQGGHQ 215

to top

>Y548_METJA (Q57968) Hypothetical protein MJ0548|
          Length = 293

 Score = 33.1 bits (74), Expect = 0.18
 Identities = 18/55 (32%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
 Frame = +1

Query: 106 EIDRVLKKVQEGVDVFDSIWNKVYDTENANQKEK-FEADLKKEIKKLQRYRDQIK 267
           +I+  +K++ E +    ++ +K YD  + N+ EK FE  +KK+I+ L +YR+Q++
Sbjct: 151 QIEDAIKEIFEKLKWHPTV-SKEYDIYSVNKYEKNFEEVIKKDIESLFKYREQLR 204

to top

>CWLO_BACLD (Q65NQ9) Peptidoglycan DL-endopeptidase cwlO precursor (EC 3.4.-.-)|
           (D-gamma-glutamyl-meso-diaminopimelyl DL-endopeptidase)
          Length = 452

 Score = 32.7 bits (73), Expect = 0.24
 Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
 Frame = +1

Query: 91  RKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTENANQKEKFEAD-LKKEIKKLQR 249
           +KL+G+I  + KK  E         NK+ D E  N+K K E + LKKEIK+ ++
Sbjct: 65  KKLEGKIQELDKKALETS-------NKIEDKEKENKKTKKEVEALKKEIKETEK 111

to top

>KIF1C_RAT (O35787) Kinesin-like protein KIF1C (Kinesin-like protein KIF1D)|
          Length = 1097

 Score = 32.0 bits (71), Expect = 0.41
 Identities = 21/58 (36%), Positives = 32/58 (55%)
 Frame = +1

Query: 133 QEGVDVFDSIWNKVYDTENANQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIEDKKA 306
           Q+G+D+   +  ++ D EN  +KEK EADL  E ++L  Y D       S E  DK++
Sbjct: 631 QQGIDIKLEMEKRLQDLENQYRKEKEEADLLLEQQRL--YADS-----DSGEDSDKRS 681

to top

>DDX51_MOUSE (Q6P9R1) ATP-dependent RNA helicase DDX51 (EC 3.6.1.-) (DEAD box|
           protein 51)
          Length = 639

 Score = 32.0 bits (71), Expect = 0.41
 Identities = 19/52 (36%), Positives = 26/52 (50%)
 Frame = +3

Query: 90  PEAAGRDRPRAQEGSGGRRRLRQHLEQGLRHRECEPEGEVRGRPQEGDQEAA 245
           PEAAG+    A+ GS  R  L +   +    ++ EPE E  G   EG+  AA
Sbjct: 12  PEAAGQGDTDAEAGSRARVLLERLQNRARERQQREPELETTGTAGEGEAAAA 63

to top

>KIF1C_MOUSE (O35071) Kinesin-like protein KIF1C|
          Length = 1100

 Score = 32.0 bits (71), Expect = 0.41
 Identities = 21/58 (36%), Positives = 32/58 (55%)
 Frame = +1

Query: 133 QEGVDVFDSIWNKVYDTENANQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIEDKKA 306
           Q+G+D+   +  ++ D EN  +KEK EADL  E ++L  Y D       S E  DK++
Sbjct: 634 QQGIDIKLEMEKRLQDLENQYRKEKEEADLLLEQQRL--YADS-----DSGEDSDKRS 684

to top

>ILVC_XYLFT (Q87CM2) Ketol-acid reductoisomerase (EC 1.1.1.86)|
           (Acetohydroxy-acid isomeroreductase)
           (Alpha-keto-beta-hydroxylacil reductoisomerase)
          Length = 350

 Score = 31.6 bits (70), Expect = 0.53
 Identities = 19/69 (27%), Positives = 31/69 (44%)
 Frame = +1

Query: 91  RKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTENANQKEKFEADLKKEIKKLQRYRDQIKT 270
           R  +  +  VLK +Q+G   F   W   Y     N K+  +ADL+  I+K+ +       
Sbjct: 274 RSTKERMKAVLKDIQDGT--FTKHWIAEYQAGLPNYKKYKQADLEHPIEKVGKQLRAKMV 331

Query: 271 WIQSSEIED 297
           W+ S +  D
Sbjct: 332 WLNSEKTND 340

to top

>CY24A_MOUSE (Q61462) Cytochrome b-245 light chain (p22 phagocyte B-cytochrome)|
           (Neutrophil cytochrome b 22 kDa polypeptide) (p22-phox)
           (p22phox) (Cytochrome b(558) alpha chain) (Cytochrome
           b558 alpha subunit) (Superoxide-generating NADPH oxidase
           light ch
          Length = 191

 Score = 31.6 bits (70), Expect = 0.53
 Identities = 14/29 (48%), Positives = 19/29 (65%)
 Frame = +3

Query: 195 PEGEVRGRPQEGDQEAAALPGPDQDLDPV 281
           P  EVR +P EG++EAA+  GP  +  PV
Sbjct: 158 PPAEVRKKPSEGEEEAASAGGPQVNPMPV 186

to top

>DNAK_LACLA (P0A3J0) Chaperone protein dnaK (Heat shock protein 70) (Heat shock|
           70 kDa protein) (HSP70)
          Length = 607

 Score = 30.8 bits (68), Expect = 0.91
 Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 10/77 (12%)
 Frame = +1

Query: 106 EIDRVLKKVQEGVDVFDSIWNKVYDTENAN-----QKEKFEADLK-----KEIKKLQRYR 255
           EID+++K  +   D  D+   +  DT N       Q EK   DL+      E+KK +  +
Sbjct: 481 EIDKMMKDAEANADA-DAKRKEEVDTRNEADALVFQTEKTLKDLEGKVEEAEVKKAEEAK 539

Query: 256 DQIKTWIQSSEIEDKKA 306
           +++K  ++  +I+D KA
Sbjct: 540 EELKKALEGEDIDDIKA 556

to top

>ILVC_XYLFA (Q9PCF9) Ketol-acid reductoisomerase (EC 1.1.1.86)|
           (Acetohydroxy-acid isomeroreductase)
           (Alpha-keto-beta-hydroxylacil reductoisomerase)
          Length = 350

 Score = 30.8 bits (68), Expect = 0.91
 Identities = 18/60 (30%), Positives = 28/60 (46%)
 Frame = +1

Query: 118 VLKKVQEGVDVFDSIWNKVYDTENANQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIED 297
           VLK +Q+G   F   W   Y     N K+  +ADL+  I+K+ +       W+ S +  D
Sbjct: 283 VLKDIQDGT--FTKHWIAEYQAGLPNYKKYKQADLEHPIEKVGKQLRAKMVWLNSEKTND 340

to top

>SPTN5_HUMAN (Q9NRC6) Spectrin beta chain, brain 4 (Spectrin, non-erythroid beta|
            chain 4) (Beta-V spectrin) (BSPECV)
          Length = 3674

 Score = 30.8 bits (68), Expect = 0.91
 Identities = 18/80 (22%), Positives = 42/80 (52%), Gaps = 7/80 (8%)
 Frame = +1

Query: 76   AMGASRKLQGEIDRVLK-------KVQEGVDVFDSIWNKVYDTENANQKEKFEADLKKEI 234
            +M   ++LQ E  R+L+        +QE ++   ++W ++ D    +QK+  +     E 
Sbjct: 2733 SMHQQQELQREGQRLLQGGHPASEAIQERLEELGALWGELQDN---SQKKVAKLQKACEA 2789

Query: 235  KKLQRYRDQIKTWIQSSEIE 294
             +L+R  ++++ W++  E+E
Sbjct: 2790 LRLRRSMEELENWLEPIEVE 2809

to top

>SRCA_MOUSE (Q7TQ48) Sarcalumenin precursor|
          Length = 910

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 17/56 (30%), Positives = 23/56 (41%)
 Frame = +3

Query: 81  GRQPEAAGRDRPRAQEGSGGRRRLRQHLEQGLRHRECEPEGEVRGRPQEGDQEAAA 248
           G + E  G  RP    GS      +    Q        PEG+V G  +EG  EA++
Sbjct: 305 GEKVEDQGEPRPSLDAGSAIEANKQSEYTQARETENDSPEGQVSGMSEEGLAEASS 360

to top

>CASC5_HUMAN (Q8NG31) Protein CASC5 (Cancer susceptibility candidate gene 5|
            protein) (ALL1-fused gene from chromosome 15q14)
            (AF15q14) (D40/AF15q14 protein)
          Length = 2342

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 17/82 (20%), Positives = 45/82 (54%), Gaps = 6/82 (7%)
 Frame = +1

Query: 76   AMGASRKLQ---GEIDRVLKKVQEGVDVFDSIWNKVYDTENANQKEKFEADLK---KEIK 237
            A     KLQ    E+D++LKK+   +   ++    + D E  N  E+++++++   KE++
Sbjct: 2027 AQNEREKLQIKIDEMDKILKKIDNCLTEMETETKNLEDEEKNNPVEEWDSEMRAAEKELE 2086

Query: 238  KLQRYRDQIKTWIQSSEIEDKK 303
            +L+   ++++  +   E++ ++
Sbjct: 2087 QLKTEEEELQRNLLELEVQKEQ 2108

to top

>KIF1C_HUMAN (O43896) Kinesin-like protein KIF1C|
          Length = 1103

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 15/37 (40%), Positives = 24/37 (64%)
 Frame = +1

Query: 133 QEGVDVFDSIWNKVYDTENANQKEKFEADLKKEIKKL 243
           Q+G+D+   +  ++ D EN  +KEK EADL  E ++L
Sbjct: 634 QQGIDIKLEMEKRLQDLENQYRKEKEEADLLLEQQQL 670

to top

>SPEE_SULTO (Q975S5) Probable spermidine synthase (EC 2.5.1.16) (Putrescine|
           aminopropyltransferase) (SPDSY)
          Length = 300

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
 Frame = +1

Query: 109 IDRVLKKVQEG---VDVFDSIWNKVYDTENANQKEKFEADLKKEIKK 240
           I  V KKV  G   V  FD +W  VY ++  N  E  + ++   IK+
Sbjct: 209 IKHVFKKVSAGITYVPAFDGLWGFVYASDEVNPAEFSKEEINNRIKE 255

to top

>BIP1_TOBAC (Q03681) Luminal-binding protein 1 (BiP 1) (78 kDa|
           glucose-regulated protein homolog 1) (GRP 78-1)
           (Fragment)
          Length = 290

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 15/84 (17%)
 Frame = +1

Query: 91  RKLQGEIDRVL----------KKVQEGVDVFDSIWNKVYDTEN-ANQKEKFEADLKKEIK 237
           R  Q EI+R++          KKV+E +D  +S+   VY+ +N  N K+K    L+ + K
Sbjct: 165 RLSQEEIERMVREAEEFAEEDKKVKERIDARNSLETYVYNMKNQINDKDKLADKLESDEK 224

Query: 238 -KLQRYRDQIKTWI---QSSEIED 297
            K++    +   W+   QS+E ED
Sbjct: 225 EKIETATKEALEWLDDNQSAEKED 248

to top

>DNAK_TETHA (Q93R27) Chaperone protein dnaK (Heat shock protein 70) (Heat shock|
           70 kDa protein) (HSP70)
          Length = 618

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 19/76 (25%), Positives = 40/76 (52%), Gaps = 10/76 (13%)
 Frame = +1

Query: 106 EIDRVLK----------KVQEGVDVFDSIWNKVYDTENANQKEKFEADLKKEIKKLQRYR 255
           EID+++K          K +E VD+ + +   ++  +        + D ++E+KK +  R
Sbjct: 482 EIDKMVKDAEANAEADEKRKEEVDLRNEVDTLLFTVDKTLSDLDGKVD-EEEVKKAENAR 540

Query: 256 DQIKTWIQSSEIEDKK 303
           D++K  +++ +IED K
Sbjct: 541 DELKAAVEADDIEDMK 556

to top

>BIP2_TOBAC (Q03682) Luminal-binding protein 2 (BiP 2) (78 kDa|
           glucose-regulated protein homolog 2) (GRP 78-2)
           (Fragment)
          Length = 292

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 15/84 (17%)
 Frame = +1

Query: 91  RKLQGEIDRVL----------KKVQEGVDVFDSIWNKVYDTEN-ANQKEKFEADLKKEIK 237
           R  Q EI+R++          KKV+E +D  +S+   VY+ +N  N K+K    L+ + K
Sbjct: 165 RLSQEEIERMVREAEEFAEEDKKVKERIDARNSLETYVYNMKNQINDKDKLADKLESDEK 224

Query: 238 -KLQRYRDQIKTWI---QSSEIED 297
            K++    +   W+   QS+E ED
Sbjct: 225 EKIETATKEALEWLDDNQSAEKED 248

to top

>INLB_LISMO (P25147) Internalin B precursor|
          Length = 630

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = +1

Query: 154 DSIWNKVYDTENANQKEKFEADLKKEIKKLQRYRDQIKTWIQSS 285
           +S+W K Y+T  A    K      K ++ L+  +  I TW Q S
Sbjct: 488 NSVWTKPYNTAGAKHVNKLSVYQGKNMRILREAKTPITTWYQFS 531

to top

>RF1_ENTFA (Q831F6) Peptide chain release factor 1 (RF-1)|
          Length = 357

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 20/66 (30%), Positives = 35/66 (53%)
 Frame = +1

Query: 106 EIDRVLKKVQEGVDVFDSIWNKVYDTENANQKEKFEADLKKEIKKLQRYRDQIKTWIQSS 285
           E+ R  K+V EG+   + + ++  D E A   ++  +DLKKE + L+   D+IK  +   
Sbjct: 46  EVYRRYKQVVEGISDAEELLSENLDAEMAEMAKEELSDLKKEKEVLE---DRIKILLLPK 102

Query: 286 EIEDKK 303
           +  D K
Sbjct: 103 DPNDDK 108

to top

>DNAK_LACLC (P0A3J1) Chaperone protein dnaK (Heat shock protein 70) (Heat shock|
           70 kDa protein) (HSP70)
          Length = 607

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 10/77 (12%)
 Frame = +1

Query: 106 EIDRVLKKVQEGVDVFDSIWNKVYDTENAN-----QKEKFEADLK-----KEIKKLQRYR 255
           EID+++K  +   D  D+   +  DT N       Q EK   DL+      E+KK +  +
Sbjct: 481 EIDKMMKDAEANADA-DAKRKEEVDTRNEADALVFQTEKTLKDLEGKVEEAEVKKAEDAK 539

Query: 256 DQIKTWIQSSEIEDKKA 306
           +++K  ++  +I+D KA
Sbjct: 540 EELKKALEGEDIDDIKA 556

to top

>RF1_LACJO (Q74K25) Peptide chain release factor 1 (RF-1)|
          Length = 362

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 17/71 (23%), Positives = 39/71 (54%), Gaps = 6/71 (8%)
 Frame = +1

Query: 109 IDRVLKKVQEGVDVFDSIWNKVYDTENANQKEKF------EADLKKEIKKLQRYRDQIKT 270
           +D+V+ +++  V  ++ +   + D E  N  +++      EAD+++ ++K ++Y+  IK 
Sbjct: 1   MDKVMAQLEGLVAHYEELQEMMADPEVINDTKRYMEISKEEADMREVVQKYRKYKSDIK- 59

Query: 271 WIQSSEIEDKK 303
                EI+D K
Sbjct: 60  -----EIDDNK 65

to top

>BIP5_TOBAC (Q03685) Luminal-binding protein 5 precursor (BiP 5) (78 kDa|
           glucose-regulated protein homolog 5) (GRP 78-5)
          Length = 668

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 15/84 (17%)
 Frame = +1

Query: 91  RKLQGEIDRVLK----------KVQEGVDVFDSIWNKVYDTEN-ANQKEKFEADLKKEIK 237
           R  Q EI+R++K          KV+E +D  +S+   VY+  N  N K+K    L+ + K
Sbjct: 541 RLSQEEIERMVKEAEEFAEEDKKVKERIDARNSLETYVYNMRNQINDKDKLADKLESDEK 600

Query: 238 -KLQRYRDQIKTWI---QSSEIED 297
            K++    +   W+   QS+E ED
Sbjct: 601 EKIETATKEALEWLDDNQSAEKED 624

to top

>BIP8_TOBAC (Q03686) Luminal-binding protein 8 (BiP 8) (78 kDa|
           glucose-regulated protein homolog 8) (GRP 78-8)
           (Fragment)
          Length = 293

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 15/84 (17%)
 Frame = +1

Query: 91  RKLQGEIDRVLK----------KVQEGVDVFDSIWNKVYDTEN-ANQKEKFEADLKKEIK 237
           R  Q EI+R++K          KV+E +D  +S+   VY+  N  N K+K    L+ + K
Sbjct: 168 RLSQEEIERMVKEAEEFAEEDKKVKERIDARNSLETYVYNMRNQINDKDKLADKLESDEK 227

Query: 238 -KLQRYRDQIKTWI---QSSEIED 297
            K++    +   W+   QS+E ED
Sbjct: 228 EKIETATKEALEWLDDNQSAEKED 251

to top

>BIP4_TOBAC (Q03684) Luminal-binding protein 4 precursor (BiP 4) (78 kDa|
           glucose-regulated protein homolog 4) (GRP 78-4)
          Length = 667

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 15/84 (17%)
 Frame = +1

Query: 91  RKLQGEIDRVLK----------KVQEGVDVFDSIWNKVYDTEN-ANQKEKFEADLKKEIK 237
           R  Q EI+R++K          KV+E +D  +S+   VY+  N  N K+K    L+ + K
Sbjct: 542 RLSQEEIERMVKEAEEFAEEDKKVKERIDARNSLETYVYNMRNQINDKDKLADKLESDEK 601

Query: 238 -KLQRYRDQIKTWI---QSSEIED 297
            K++    +   W+   QS+E ED
Sbjct: 602 EKIETATKEALEWLDDNQSAEKED 625

to top

>DDX46_BRARE (Q4TVV3) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-)|
           (DEAD box protein 46)
          Length = 1018

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
 Frame = +3

Query: 78  HGRQPEAAGRDRPRAQEGSGGRRRLRQHLEQGLRHR---ECEPEGEVRGRPQEGDQEA 242
           H R+  +  R+R R++E    RR  R       R R   +    G  + +P+ GDQ A
Sbjct: 43  HSRRERSRSRERRRSRERKRQRRSSRDRRRSRSRERRRSKSRSRGRSKEKPENGDQTA 100

to top

>ANDR_MOUSE (P19091) Androgen receptor (Dihydrotestosterone receptor)|
          Length = 899

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 26/79 (32%), Positives = 32/79 (40%), Gaps = 14/79 (17%)
 Frame = +3

Query: 84  RQPEAAGRDRPRA-----QEGSGGRRRLRQHLEQGLRHRECEPEGEVRG---------RP 221
           R PEAA    P A     QE S  RRR +QH E G       P+  +RG           
Sbjct: 40  RHPEAANIAPPGACLQQRQETSPRRRRRQQHTEDG------SPQAHIRGPTGYLALEEEQ 93

Query: 222 QEGDQEAAALPGPDQDLDP 278
           Q   Q+AA+   P+    P
Sbjct: 94  QPSQQQAASEGHPESSCLP 112

to top

>SYC_CLOTE (Q890M4) Cysteinyl-tRNA synthetase (EC 6.1.1.16) (Cysteine--tRNA|
           ligase) (CysRS)
          Length = 465

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
 Frame = +1

Query: 130 VQEGVDVFDSIWNKVYDTEN-ANQKEK--FEADLKKEIKKLQRYRDQ 261
           +Q  +   + ++N +Y+ EN AN+ ++     + KK IKKL  YR++
Sbjct: 307 LQSAMSAVERLYNAIYNLENLANEVKRNDLNEEEKKYIKKLDEYREK 353

to top

>JIP3_DROME (Q9GQF1) JNK-interacting protein 3 (Protein sunday driver)|
          Length = 1227

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
 Frame = +1

Query: 184 ENANQKEKFEADLKKEIKKL-QRYRDQIKTWIQSSE 288
           E+A++ E+ EADLKKE  KL +RY +  K  +   E
Sbjct: 158 EHASRLEEREADLKKEYNKLHERYTELFKNHVDYME 193

to top

>INHA_MOUSE (Q04997) Inhibin alpha chain precursor|
          Length = 366

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 4/35 (11%)
 Frame = +3

Query: 114 PRAQEGSGG----RRRLRQHLEQGLRHRECEPEGE 206
           P A +G GG    RR  R+H   G  HR  EPE E
Sbjct: 45  PPAMDGEGGDPGIRRLPRRHAVGGFMHRTSEPEEE 79

to top

>KLP2_SCHPO (Q9US03) Kinesin-like protein 2|
          Length = 817

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 6/58 (10%)
 Frame = +1

Query: 94  KLQGEIDRVLKKVQEGVDVFDSIWNKVYDTENANQKEKFEA------DLKKEIKKLQR 249
           +LQ E D +LKKVQEG  +        +D E    +   +        LK++I++LQR
Sbjct: 324 RLQEEKDSLLKKVQEGASLAMQRVQNKHDLEKKRLQSAIQPLQEENNSLKQQIEQLQR 381

to top

>CY24A_RAT (Q62737) Cytochrome b-245 light chain (p22 phagocyte B-cytochrome)|
           (Neutrophil cytochrome b 22 kDa polypeptide) (p22-phox)
           (p22phox) (Cytochrome b(558) alpha chain) (Cytochrome
           b558 alpha subunit) (Superoxide-generating NADPH oxidase
           light chai
          Length = 191

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +3

Query: 195 PEGEVRGRPQEGDQEAAALPGPDQDLDPV 281
           P  EVR +P E ++EAA+  GP  +  PV
Sbjct: 158 PPAEVRKKPSEAEEEAASAGGPQVNPIPV 186

to top

>INHA_RAT (P17490) Inhibin alpha chain precursor|
          Length = 366

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 4/35 (11%)
 Frame = +3

Query: 114 PRAQEGSGG----RRRLRQHLEQGLRHRECEPEGE 206
           P A +G GG    RR  R+H   G  HR  EPE E
Sbjct: 45  PPAMDGEGGGPGIRRLPRRHALGGFMHRTSEPEEE 79

to top

>SECA_STACA (P47994) Preprotein translocase secA subunit|
          Length = 844

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 13/42 (30%), Positives = 26/42 (61%), Gaps = 5/42 (11%)
 Frame = +1

Query: 100 QGEI--DRVLKKVQEGVDVFDSIWNKV---YDTENANQKEKF 210
           +GE+  D +  K ++  D+FD++W K+   Y+ + AN  ++F
Sbjct: 672 EGEVKEDEIKGKGKDREDIFDTVWAKIEKAYEAQKANIPDQF 713

to top

>IWS1_ASPFU (Q4WSM6) Transcription factor iws1|
          Length = 460

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 20/70 (28%), Positives = 36/70 (51%)
 Frame = +3

Query: 84  RQPEAAGRDRPRAQEGSGGRRRLRQHLEQGLRHRECEPEGEVRGRPQEGDQEAAALPGPD 263
           ++ E  G+   R +EG   ++  R+ +E+GL       EGE + R ++  ++  A P  +
Sbjct: 124 KRTEEDGQQVKRKREGRREKKNRRRDMEEGL------DEGEDKSRRRD-RKKRDATPEDE 176

Query: 264 QDLDPVQRDR 293
           + LDP  R R
Sbjct: 177 ELLDPATRRR 186

to top

>SSF1_HUMAN (Q9NQ55) Suppressor of SWI4 1 homolog (Ssf-1) (Peter Pan homolog)|
          Length = 473

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 18/64 (28%), Positives = 31/64 (48%)
 Frame = +3

Query: 111 RPRAQEGSGGRRRLRQHLEQGLRHRECEPEGEVRGRPQEGDQEAAALPGPDQDLDPVQRD 290
           R +AQ  +   + +++  EQ   HR+   EG  + R    D+EA+ +P     L+  + D
Sbjct: 320 RLKAQRQAQQAQNVQRKQEQREAHRKKSLEGMKKARVGGSDEEASGIPSRTASLELGEDD 379

Query: 291 RGQE 302
             QE
Sbjct: 380 DEQE 383

to top

>EF3_CANAL (P25997) Elongation factor 3 (EF-3)|
          Length = 1049

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 19/65 (29%), Positives = 35/65 (53%)
 Frame = +1

Query: 100  QGEIDRVLKKVQEGVDVFDSIWNKVYDTENANQKEKFEADLKKEIKKLQRYRDQIKTWIQ 279
            QG   R+ KK  E  D FD++ NK+   +   +K+   A+L+K+ K+  + + ++     
Sbjct: 986  QGSGPRIEKKDDEEEDKFDAMGNKIAAAK--KKKKLSSAELRKKKKERMKKKKELGDAYV 1043

Query: 280  SSEIE 294
            SS+ E
Sbjct: 1044 SSDEE 1048

to top

>IKBL_HUMAN (Q9UBC1) NF-kappa-B inhibitor-like protein 1 (Inhibitor of kappa|
           B-like) (I-kappa-B-like) (IkappaBL) (Nuclear factor of
           kappa light polypeptide gene enhancer in B-cells
           inhibitor-like 1)
          Length = 381

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 19/56 (33%), Positives = 25/56 (44%)
 Frame = +3

Query: 75  CHGRQPEAAGRDRPRAQEGSGGRRRLRQHLEQGLRHRECEPEGEVRGRPQEGDQEA 242
           C  +Q EA G  RP   EGS    R ++  ++  R R    E E+R       QEA
Sbjct: 213 CQQQQREAEGSCRPPRAEGSSQSWRQQEEEQRLFRERARAKEEELRESRARRAQEA 268

to top

>SUPT3_HUMAN (O75486) Transcription initiation protein SPT3 homolog (SPT3-like|
           protein)
          Length = 399

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 20/86 (23%), Positives = 41/86 (47%), Gaps = 9/86 (10%)
 Frame = +1

Query: 73  DAMGASRKLQGEIDRVLK---------KVQEGVDVFDSIWNKVYDTENANQKEKFEADLK 225
           D +   RK + ++ R+LK         K+ +G+D  D + +K+  + NAN+++K   D  
Sbjct: 164 DLLFLMRKDKKKLRRLLKYMFIRDYKSKIVKGIDEDDLLEDKLSGSNNANKRQKIAQDFL 223

Query: 226 KEIKKLQRYRDQIKTWIQSSEIEDKK 303
             I +      ++    +  EI++ K
Sbjct: 224 NSIDQ----TGELLAMFEDDEIDEVK 245

to top

>DNAK_STAES (Q8CP17) Chaperone protein dnaK (Heat shock protein 70) (Heat shock|
           70 kDa protein) (HSP70)
          Length = 609

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 10/77 (12%)
 Frame = +1

Query: 106 EIDRVLKKVQEGVDVFDSIWNKVYDTENAN-----QKEKFEADLKKEI-----KKLQRYR 255
           EIDR++K  +E  +  D    +  D  N       Q EK   DL + I     K  +  +
Sbjct: 481 EIDRMVKDAEENAEA-DKKRREEVDLRNEADSLVFQVEKTVKDLGENISDEDKKNAEEKK 539

Query: 256 DQIKTWIQSSEIEDKKA 306
           D +KT ++  +I+D KA
Sbjct: 540 DALKTALEGEDIDDIKA 556

to top

>DNAK_STAEQ (Q5HNW6) Chaperone protein dnaK (Heat shock protein 70) (Heat shock|
           70 kDa protein) (HSP70)
          Length = 609

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 10/77 (12%)
 Frame = +1

Query: 106 EIDRVLKKVQEGVDVFDSIWNKVYDTENAN-----QKEKFEADLKKEI-----KKLQRYR 255
           EIDR++K  +E  +  D    +  D  N       Q EK   DL + I     K  +  +
Sbjct: 481 EIDRMVKDAEENAEA-DKKRREEVDLRNEADSLVFQVEKTVKDLGENISDEDKKNAEEKK 539

Query: 256 DQIKTWIQSSEIEDKKA 306
           D +KT ++  +I+D KA
Sbjct: 540 DALKTALEGEDIDDIKA 556

to top

>NSBP1_MOUSE (Q9JL35) Nucleosome-binding protein 1 (Nucleosome-binding protein|
           45) (NBP-45) (GARP45 protein)
          Length = 406

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
 Frame = +3

Query: 87  QPEAAGRDRPRAQEGSGGRRRLRQHLEQGLR---HREC--EPEGEVRGRPQEGDQEAAAL 251
           QPE  G++    ++G  G      H E+G +   H E   E +G    R +EG+QE A  
Sbjct: 320 QPEEDGKEGQCKEDGKEG------HHEEGGKEDLHEEDGKEKDGGKEDRKEEGEQEVAVD 373

Query: 252 PGPDQD 269
            G D++
Sbjct: 374 EGSDEN 379

to top

>ERCC6_HUMAN (Q03468) DNA excision repair protein ERCC-6 (EC 3.6.1.-)|
           (ATP-dependent helicase ERCC6) (Cockayne syndrome
           protein CSB)
          Length = 1493

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 20/53 (37%), Positives = 24/53 (45%)
 Frame = +1

Query: 91  RKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTENANQKEKFEADLKKEIKKLQR 249
           RK QG   R  +K    V     + NK    + A    K E  LKK IKKLQ+
Sbjct: 285 RKKQGCNKRAARKAPAPVTPPAPVQNKNKPNKKARVLSKKEERLKKHIKKLQK 337

to top

>DNAK_LACPL (Q88VM0) Chaperone protein dnaK (Heat shock protein 70) (Heat shock|
           70 kDa protein) (HSP70)
          Length = 622

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
 Frame = +1

Query: 145 DVFDSIWNKVYDTENANQKEKFEADLKKEIKKLQRYRDQIKTWIQS--SEIEDKKA 306
           D  D +  +  + E A++K K E DLK E+ +L    D+    ++   SE E KKA
Sbjct: 483 DEIDQMVKEAKENEEADKKRKEEVDLKNEVDQLIFTTDKTLKDLEGKVSEDEVKKA 538

to top

>RHO_MICLU (P52154) Transcription termination factor rho (EC 3.6.1.-)|
           (ATP-dependent helicase rho)
          Length = 690

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
 Frame = +3

Query: 81  GRQPEAAGRDRPRAQEGSGGRRRL-RQHLEQGLRHRECEPEGE-VRGRPQEGDQEAAALP 254
           G +    G DRP+++  S GRRR      +QG   R    +GE      + GD+E     
Sbjct: 141 GSEARDEGEDRPQSERRSRGRRRAGDDDAQQGQDRRSDGAQGEDGADADRRGDRE----- 195

Query: 255 GPDQDLDPVQRDRGQEG 305
             D+D +  +  RG+ G
Sbjct: 196 --DRDDNGRENGRGRNG 210

to top

>OST2_HUMAN (Q9Y278) Heparan sulfate glucosamine 3-O-sulfotransferase 2 (EC|
           2.8.2.29) (Heparan sulfate D-glucosaminyl
           3-O-sulfotransferase 2) (Heparan sulfate
           3-O-sulfotransferase 2) (h3-OST-2)
          Length = 367

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 20/58 (34%), Positives = 25/58 (43%), Gaps = 5/58 (8%)
 Frame = +3

Query: 102 GRDR----PRAQEG-SGGRRRLRQHLEQGLRHRECEPEGEVRGRPQEGDQEAAALPGP 260
           GR R    PR   G S G ++L Q      + R C+P G     P      AAA+P P
Sbjct: 45  GRSRLLGAPRCLRGPSAGGQKLLQ------KSRPCDPSGPTPSEPSAPSAPAAAVPAP 96

to top

>ANDR_RAT (P15207) Androgen receptor (Dihydrotestosterone receptor)|
          Length = 902

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 26/81 (32%), Positives = 30/81 (37%), Gaps = 22/81 (27%)
 Frame = +3

Query: 84  RQPEAAGRDRPRA-----QEGSGGRRRLRQHLEQGLRHRECEPEGEVRG----------- 215
           R PEAA    P A     QE S  RRR +QH E G       P+  +RG           
Sbjct: 40  RHPEAASIAPPGACLQQRQETSPRRRRRQQHPEDG------SPQAHIRGTTGYLALEEEQ 93

Query: 216 ------RPQEGDQEAAALPGP 260
                    EG  E+  LP P
Sbjct: 94  QPSQQQSASEGHPESGCLPEP 114

to top

>SH2P1_XENTR (Q6DEU9) SH2 domain-binding protein 1|
          Length = 1172

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 5/69 (7%)
 Frame = +3

Query: 84   RQPEAAGRDRPRAQEGSGG-----RRRLRQHLEQGLRHRECEPEGEVRGRPQEGDQEAAA 248
            RQ   +  D  +++  SGG     R   R    Q    R  + EG  R  P E +QEA+ 
Sbjct: 1101 RQDSGSDNDSAQSRRSSGGSDNESRAASRSPESQRGSDRGSDNEGSARASPNESEQEASN 1160

Query: 249  LPGPDQDLD 275
                D+  D
Sbjct: 1161 NEKSDRGSD 1169

to top

>IKBL_MACMU (Q5TM19) NF-kappa-B inhibitor-like protein 1 (Inhibitor of kappa|
           B-like) (I-kappa-B-like) (IkappaBL) (Nuclear factor of
           kappa light polypeptide gene enhancer in B-cells
           inhibitor-like 1)
          Length = 381

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 19/56 (33%), Positives = 25/56 (44%)
 Frame = +3

Query: 75  CHGRQPEAAGRDRPRAQEGSGGRRRLRQHLEQGLRHRECEPEGEVRGRPQEGDQEA 242
           C  +Q EA G  RP   EGS    R ++  ++  R R    E E+R       QEA
Sbjct: 213 CQQQQREAEGSCRPPRAEGSSQSWRQQEEEQRLFRERARVKEEELRESRARRAQEA 268

to top

>RU17_ARATH (Q42404) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70|
           kDa) (snRNP70) (U1-70K)
          Length = 427

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
 Frame = +3

Query: 102 GRDRPRAQEGSGG--RRRLRQHLEQGLRHRECEPEGEVRGRPQEGDQEAAALPGPDQDLD 275
           G++R R++E S    R R R    +   HR+ +  G  R R    D++     G   D D
Sbjct: 272 GKERERSRELSHEQPRERSRDRPREDKHHRDRDQGGRDRDRDSRRDRDRTRDRG---DRD 328

Query: 276 PVQRDRGQE 302
              RDRG++
Sbjct: 329 RRDRDRGRD 337

to top

>SUBE_BACSU (P16396) Minor extracellular protease epr precursor (EC 3.4.21.-)|
          Length = 645

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
 Frame = +1

Query: 73  DAMGASRKLQGEIDRVLK----KVQEGVDVFDSIWNKVYDTENANQKEKFEADLKKEIKK 240
           D + + R ++   D+V K    K Q+ VD   +  NK+    N   K           K 
Sbjct: 430 DKVQSYRNVKDAKDKVAKAEKYKTQQTVDTAQTAINKL---PNGTDK-----------KN 475

Query: 241 LQRYRDQIKTWIQSSEIEDKKA 306
           LQ+  DQ+K +I S + +DK A
Sbjct: 476 LQKRLDQVKRYIASKQAKDKVA 497

to top

>EF3B_YEAST (P53978) Elongation factor 3B (EF-3B) (Translation elongation factor|
            3B) (Homolog of EF-3)
          Length = 1043

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 17/63 (26%), Positives = 35/63 (55%)
 Frame = +1

Query: 100  QGEIDRVLKKVQEGVDVFDSIWNKVYDTENANQKEKFEADLKKEIKKLQRYRDQIKTWIQ 279
            QG   R+ KK +EG D FD++ NK+   +  ++    E   KK+ +++++ ++    ++ 
Sbjct: 981  QGAGPRIEKKEEEG-DKFDAMGNKINSGKKKSKLSSAELRKKKK-ERMKKKKEMGDEYVS 1038

Query: 280  SSE 288
            S E
Sbjct: 1039 SDE 1041

to top

>DNAK_DESDG (Q313S2) Chaperone protein dnaK (Heat shock protein 70) (Heat shock|
           70 kDa protein) (HSP70)
          Length = 637

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 18/59 (30%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
 Frame = +1

Query: 124 KKVQEGVDVFDSIWNKVYDTENA--NQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIE 294
           KK +E ++  +   + +Y TE +  +  +K EADLKKEI+        +KT ++ S+++
Sbjct: 521 KKKKELIEARNQADSLIYTTEKSLSDLGDKLEADLKKEIEDKTA---ALKTAMEGSDVD 576

to top

>BRE1_YEAST (Q07457) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-) (Brefeldin|
           A-sensitivity protein 1)
          Length = 700

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 12/44 (27%), Positives = 21/44 (47%)
 Frame = +1

Query: 118 VLKKVQEGVDVFDSIWNKVYDTENANQKEKFEADLKKEIKKLQR 249
           VL  +Q  +D+    W K+    N  +    +  L KEI+ L++
Sbjct: 407 VLSDLQHAIDILKEQWTKIDQRSNDTKSSSTQDALIKEIQDLEK 450

to top

>NUCB1_HUMAN (Q02818) Nucleobindin-1 precursor (CALNUC)|
          Length = 461

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 12/49 (24%), Positives = 25/49 (51%)
 Frame = +3

Query: 141 RRRLRQHLEQGLRHRECEPEGEVRGRPQEGDQEAAALPGPDQDLDPVQR 287
           +R+ +Q  +QG +     PEG+++  P   D    A  G  +++D  ++
Sbjct: 398 QRKQQQQQQQGHKAPAAHPEGQLKFHPDTDDVPVPAPAGDQKEVDTSEK 446

to top

>INHA_HUMAN (P05111) Inhibin alpha chain precursor|
          Length = 366

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 22/69 (31%), Positives = 27/69 (39%), Gaps = 1/69 (1%)
 Frame = +3

Query: 93  EAAGRDRPRAQEGSGGRRRL-RQHLEQGLRHRECEPEGEVRGRPQEGDQEAAALPGPDQD 269
           +A G      + G  G RRL R+H   G  HR  EPE E      E   +A   P  D  
Sbjct: 39  DALGPPAVTREGGDPGVRRLPRRHALGGFTHRGSEPEEE------EDVSQAILFPATDAS 92

Query: 270 LDPVQRDRG 296
            +     RG
Sbjct: 93  CEDKSAARG 101

to top

>DNAK_ENTFA (Q835R7) Chaperone protein dnaK (Heat shock protein 70) (Heat shock|
           70 kDa protein) (HSP70)
          Length = 609

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 11/27 (40%), Positives = 20/27 (74%)
 Frame = +1

Query: 226 KEIKKLQRYRDQIKTWIQSSEIEDKKA 306
           +E+KK +  RD++K  I++++IE  KA
Sbjct: 531 EEVKKAEDARDELKAAIEANDIEQMKA 557

to top

>VP38_GAHVN (P68348) 38 kDa phosphoprotein (Phosphoprotein pp38)|
          Length = 290

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 20/60 (33%), Positives = 27/60 (45%)
 Frame = +3

Query: 114 PRAQEGSGGRRRLRQHLEQGLRHRECEPEGEVRGRPQEGDQEAAALPGPDQDLDPVQRDR 293
           P+  +G+ GR  +      G    EC  +GE     + GD E +A       LD VQRDR
Sbjct: 19  PQGGKGAEGRAGVADEAGHGKTEAECAEDGE-----KCGDAEMSA-------LDRVQRDR 66

to top

>VP38_GAHVG (P68347) 38 kDa phosphoprotein (Phosphoprotein pp38)|
          Length = 290

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 20/60 (33%), Positives = 27/60 (45%)
 Frame = +3

Query: 114 PRAQEGSGGRRRLRQHLEQGLRHRECEPEGEVRGRPQEGDQEAAALPGPDQDLDPVQRDR 293
           P+  +G+ GR  +      G    EC  +GE     + GD E +A       LD VQRDR
Sbjct: 19  PQGGKGAEGRAGVADEAGHGKTEAECAEDGE-----KCGDAEMSA-------LDRVQRDR 66

to top

>DYHC_DROME (P37276) Dynein heavy chain, cytosolic (DYHC)|
          Length = 4639

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 14/42 (33%), Positives = 24/42 (57%)
 Frame = +1

Query: 178  DTENANQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIEDKK 303
            +  NA  K+ F+   + E KK+Q    QI+   Q+ +IE+K+
Sbjct: 3219 EAANAKLKQMFQDQQEAEKKKIQSQEIQIRLADQTVKIEEKR 3260

to top

>CWC25_YARLI (Q6C1V6) Pre-mRNA-splicing factor CWC25|
          Length = 561

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
 Frame = +3

Query: 105 RDRPRAQEGSGGR-RRLRQHLEQGLRHRECEPEGEVRGRPQEGDQEAAALPGPDQDLDPV 281
           R+R R++E    R RR R+        R+ E EGE R R ++G++        D      
Sbjct: 170 RERSRSRERERRRPRRKREDSRDRRNRRDMEREGERRRRRRDGERTRRRERNRDPSPSVS 229

Query: 282 QRDRG 296
             DRG
Sbjct: 230 DDDRG 234

to top

>MFA1P_CHICK (P55080) Microfibrillar-associated protein 1 (Associated|
           microfibril protein) (AMF)
          Length = 442

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 10/28 (35%), Positives = 22/28 (78%)
 Frame = +1

Query: 178 DTENANQKEKFEADLKKEIKKLQRYRDQ 261
           DT++ N +E++EA   +E+K+++R R++
Sbjct: 269 DTDDENDEEEYEAWKVRELKRIKRDREE 296

to top

>KLF15_MOUSE (Q9EPW2) Krueppel-like factor 15 (Cardiovascular Kruppel-like|
           factor)
          Length = 415

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 18/57 (31%), Positives = 20/57 (35%)
 Frame = +3

Query: 90  PEAAGRDRPRAQEGSGGRRRLRQHLEQGLRHRECEPEGEVRGRPQEGDQEAAALPGP 260
           PE   RD     + S G  R   H E   R R   P G   G   +   E  A  GP
Sbjct: 159 PENGSRDLETCSQLSAGSHRSHLHPESAGRERCTPPPGGTSGGGAQSAGEGPAHDGP 215

to top

>DPOL_BPT7 (P00581) DNA polymerase (EC 2.7.7.7) (T7 DNA polymerase)|
          Length = 704

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 15/45 (33%), Positives = 17/45 (37%)
 Frame = +3

Query: 123 QEGSGGRRRLRQHLEQGLRHRECEPEGEVRGRPQEGDQEAAALPG 257
           Q   G +  LR   E G  H    P G V GR        A +PG
Sbjct: 398 QSAEGDKAWLRYVAEDGKIHGSVNPNGAVTGRATHAFPNLAQIPG 442

to top

>DPOL_BPT3 (P20311) DNA polymerase (EC 2.7.7.7)|
          Length = 704

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 15/45 (33%), Positives = 17/45 (37%)
 Frame = +3

Query: 123 QEGSGGRRRLRQHLEQGLRHRECEPEGEVRGRPQEGDQEAAALPG 257
           Q   G +  LR   E G  H    P G V GR        A +PG
Sbjct: 398 QSAEGDKAWLRYVAEDGKIHGSVNPNGAVTGRATHAFPNLAQIPG 442

to top

>FYV1_MOUSE (Q9Z1T6) FYVE finger-containing phosphoinositide kinase (EC 2.7.1.68)|
            (1-phosphatidylinositol-4-phosphate 5-kinase) (PIP5K)
            (PtdIns(4)P-5-kinase) (PIKfyve) (p235)
          Length = 2052

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 17/67 (25%), Positives = 30/67 (44%)
 Frame = +3

Query: 72   GCHGRQPEAAGRDRPRAQEGSGGRRRLRQHLEQGLRHRECEPEGEVRGRPQEGDQEAAAL 251
            G  G+ P+ + + R   +       ++ Q  ++GL  +  EP+ EV G    GD +   L
Sbjct: 1703 GTAGKSPDLSSQKRETLRGADSAYYQVGQAGKEGLESQGLEPQDEVDG----GDTQKKQL 1758

Query: 252  PGPDQDL 272
              P  +L
Sbjct: 1759 TNPHVEL 1765


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.306    0.126    0.337 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,123,116
Number of Sequences: 219361
Number of extensions: 459446
Number of successful extensions: 2059
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 1974
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2047
length of database: 80,573,946
effective HSP length: 77
effective length of database: 63,683,149
effective search space used: 1528395576
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (22.0 bits)

to top

full-length cDNA and EST

Clone Information

BLAST Search Result