Clone Name | bastl11h11 |
---|---|
Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | UVH1_ARATH (Q9LKI5) DNA repair endonuclease UVH1 (EC 3.1.-.-) (U... | 29 | 3.2 |
---|
>UVH1_ARATH (Q9LKI5) DNA repair endonuclease UVH1 (EC 3.1.-.-) (Ultraviolet| hypersensitive 1) (AtRAD1) (DNA excision repair protein XP-F homolog) Length = 956 Score = 29.3 bits (64), Expect = 3.2 Identities = 10/20 (50%), Positives = 17/20 (85%) Frame = +1 Query: 58 FEEQAVADLLEDPNGGLVVV 117 + +Q ++DLLED NGGL+++ Sbjct: 5 YHQQIISDLLEDSNGGLLIL 24 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.305 0.131 0.344 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 9,254,754 Number of Sequences: 219361 Number of extensions: 45495 Number of successful extensions: 33 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 33 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 33 length of database: 80,573,946 effective HSP length: 15 effective length of database: 77,283,531 effective search space used: 1854804744 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 43 (21.9 bits)