ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl11h11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 90 2e-15
2gb|AC097627.1| Genomic sequence for Oryza sativa, Nipponbare str... 90 2e-15
3dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 90 2e-15
4dbj|AK121880.1| Oryza sativa (japonica cultivar-group) cDNA clon... 90 2e-15
5dbj|AK068556.1| Oryza sativa (japonica cultivar-group) cDNA clon... 90 2e-15
6ref|XM_824691.1| Trypanosoma brucei TREU927 variant surface glyc... 40 1.4
7gb|DQ010753.1| Unidentified bacterium clone 10g58 membrane bound... 40 1.4
8dbj|AP007164.1| Aspergillus oryzae RIB40 genomic DNA, SC111 40 1.4
9gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 40 1.4
10dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 1.4
11gb|AY011606.1| Megaptera novaeangliae cannabinoid receptor 1 (CN... 40 1.4
12dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 1.4
13gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome 40 1.4
14dbj|AK109534.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 1.4
15gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 40 1.4
16gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 40 1.4
17gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 1.4
18emb|AL928758.3|CNS08CBV Oryza sativa chromosome 12, . BAC OSJNBb... 40 1.4
19emb|AL954632.3|CNS08CD0 Oryza sativa chromosome 12, . BAC OSJNBa... 40 1.4
20gb|AC101807.12| Mus musculus chromosome 18, clone RP24-251J22, c... 38 5.5
21ref|XM_550262.1| Oryza sativa (japonica cultivar-group), mRNA 38 5.5
22ref|XM_479726.1| Oryza sativa (japonica cultivar-group), mRNA 38 5.5
23gb|AC134927.2| Oryza sativa (japonica cultivar-group) chromosome... 38 5.5
24gb|AC135424.3| Oryza sativa (japonica cultivar-group) chromosome... 38 5.5
25gb|AC134344.2| Oryza sativa (japonica cultivar-group) chromosome... 38 5.5
26gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 38 5.5
27gb|AC108500.3| Oryza sativa (japonica cultivar-group) chromosome... 38 5.5
28gb|AC130607.2| Oryza sativa (japonica cultivar-group) chromosome... 38 5.5
29gb|AC130729.3| Oryza sativa (japonica cultivar-group) chromosome... 38 5.5
30gb|BC055002.1| Mus musculus serine/threonine kinase 32A, mRNA (c... 38 5.5
31ref|NM_178749.2| Mus musculus serine/threonine kinase 32A (Stk32... 38 5.5
32gb|AY523976.1|AY523972S5 Azospirillum brasilense plasmid 90 MDa,... 38 5.5
33gb|AY459343.1| Oryza sativa (japonica cultivar-group) clone CL01... 38 5.5
34gb|AY245455.1| Hordeum vulgare subsp. vulgare thioredoxin h isof... 38 5.5
35dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, compl... 38 5.5
36gb|AC087726.36| Chlamydomonas reinhardtii clone cr-40a20, comple... 38 5.5
37ref|NM_166393.1| Drosophila melanogaster CG30143-RA (CG30143), mRNA 38 5.5
38dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 38 5.5
39gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome 38 5.5
40gb|CP000249.1| Frankia sp. CcI3, complete genome 38 5.5
41dbj|AK036266.1| Mus musculus 16 days neonate cerebellum cDNA, RI... 38 5.5
42dbj|AK042599.1| Mus musculus 7 days neonate cerebellum cDNA, RIK... 38 5.5
43dbj|AK044474.1| Mus musculus adult retina cDNA, RIKEN full-lengt... 38 5.5
44gb|AC091635.1|AC091635 Drosophila melanogaster, chromosome 2R, r... 38 5.5
45dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 38 5.5
46dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 38 5.5
47dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 38 5.5
48dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 38 5.5
49gb|AC008347.2|AC008347 Drosophila melanogaster, chromosome 2R, r... 38 5.5
50dbj|AP004161.3| Oryza sativa (japonica cultivar-group) genomic D... 38 5.5
51dbj|AP003339.4| Oryza sativa (japonica cultivar-group) genomic D... 38 5.5
52dbj|AP004584.3| Oryza sativa (japonica cultivar-group) genomic D... 38 5.5
53dbj|AK109954.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 5.5
54dbj|AK105787.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 5.5
55gb|AY530952.1| Zea mays unknown (Z576C20.2), putative heme oxyge... 38 5.5
56dbj|AK065362.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 5.5
57gb|AE003792.3| Drosophila melanogaster chromosome 2R, section 58... 38 5.5
58gb|AE004969.1| Neisseria gonorrhoeae FA 1090, complete genome 38 5.5
59dbj|AP002912.2| Oryza sativa (japonica cultivar-group) genomic D... 38 5.5
60gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome 38 5.5
61emb|AL954853.5|CNS08CD7 Oryza sativa chromosome 12, . BAC OSJNBb... 38 5.5 
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 89.7 bits (45), Expect = 2e-15
 Identities = 63/69 (91%)
 Strand = Plus / Plus

                                                                         
Query: 48    gatgcttccgttcgaggagcaggccgtggcggacctcctggaggatcccaacggagggct 107
             ||||||||| |||||||||||||  |||||||||||||||||||| |||||||| || ||
Sbjct: 44805 gatgcttcccttcgaggagcaggtggtggcggacctcctggaggaccccaacggcggcct 44864

                      
Query: 108   ggtggtggt 116
             |||||||||
Sbjct: 44865 ggtggtggt 44873
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>gb|AC097627.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0079B22, from chromosome 3, complete sequence
          Length = 125217

 Score = 89.7 bits (45), Expect = 2e-15
 Identities = 63/69 (91%)
 Strand = Plus / Minus

                                                                         
Query: 48    gatgcttccgttcgaggagcaggccgtggcggacctcctggaggatcccaacggagggct 107
             ||||||||| |||||||||||||  |||||||||||||||||||| |||||||| || ||
Sbjct: 80413 gatgcttcccttcgaggagcaggtggtggcggacctcctggaggaccccaacggcggcct 80354

                      
Query: 108   ggtggtggt 116
             |||||||||
Sbjct: 80353 ggtggtggt 80345
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3,
             complete sequence
          Length = 36192742

 Score = 89.7 bits (45), Expect = 2e-15
 Identities = 63/69 (91%)
 Strand = Plus / Plus

                                                                         
Query: 48    gatgcttccgttcgaggagcaggccgtggcggacctcctggaggatcccaacggagggct 107
             ||||||||| |||||||||||||  |||||||||||||||||||| |||||||| || ||
Sbjct: 44805 gatgcttcccttcgaggagcaggtggtggcggacctcctggaggaccccaacggcggcct 44864

                      
Query: 108   ggtggtggt 116
             |||||||||
Sbjct: 44865 ggtggtggt 44873
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>dbj|AK121880.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033104L13, full
           insert sequence
          Length = 3178

 Score = 89.7 bits (45), Expect = 2e-15
 Identities = 63/69 (91%)
 Strand = Plus / Plus

                                                                       
Query: 48  gatgcttccgttcgaggagcaggccgtggcggacctcctggaggatcccaacggagggct 107
           ||||||||| |||||||||||||  |||||||||||||||||||| |||||||| || ||
Sbjct: 47  gatgcttcccttcgaggagcaggtggtggcggacctcctggaggaccccaacggcggcct 106

                    
Query: 108 ggtggtggt 116
           |||||||||
Sbjct: 107 ggtggtggt 115
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>dbj|AK068556.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151H20, full
           insert sequence
          Length = 3118

 Score = 89.7 bits (45), Expect = 2e-15
 Identities = 63/69 (91%)
 Strand = Plus / Plus

                                                                       
Query: 48  gatgcttccgttcgaggagcaggccgtggcggacctcctggaggatcccaacggagggct 107
           ||||||||| |||||||||||||  |||||||||||||||||||| |||||||| || ||
Sbjct: 54  gatgcttcccttcgaggagcaggtggtggcggacctcctggaggaccccaacggcggcct 113

                    
Query: 108 ggtggtggt 116
           |||||||||
Sbjct: 114 ggtggtggt 122
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>ref|XM_824691.1| Trypanosoma brucei TREU927 variant surface glycoprotein
           (Tb11.14.0015) partial mRNA
          Length = 1425

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 29  cgccgccgccgttgccgacg 48
           ||||||||||||||||||||
Sbjct: 753 cgccgccgccgttgccgacg 734
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>gb|DQ010753.1| Unidentified bacterium clone 10g58 membrane bound nitrate reductase
           (narG) gene, partial cds
          Length = 653

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 9   gcagacgaacggaaccagct 28
           ||||||||||||||||||||
Sbjct: 81  gcagacgaacggaaccagct 100
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>dbj|AP007164.1| Aspergillus oryzae RIB40 genomic DNA, SC111
          Length = 2356219

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 28     tcgccgccgccgttgccgacgatg 51
              |||| |||||||||||||||||||
Sbjct: 179707 tcgcggccgccgttgccgacgatg 179730
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>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 22      accagctcgccgccgccgttgccg 45
               ||||| ||||||||||||||||||
Sbjct: 3011291 accagatcgccgccgccgttgccg 3011314
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 28      tcgccgccgccgttgccgacgatg 51
               |||||||||||| |||||||||||
Sbjct: 2762249 tcgccgccgccgctgccgacgatg 2762226



 Score = 38.2 bits (19), Expect = 5.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 27      ctcgccgccgccgttgccgacga 49
               |||||||||||||| ||||||||
Sbjct: 5674651 ctcgccgccgccgtcgccgacga 5674629
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>gb|AY011606.1| Megaptera novaeangliae cannabinoid receptor 1 (CNR1) gene, partial
           cds
          Length = 990

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 69  ggccgtggcggacctcctgg 88
           ||||||||||||||||||||
Sbjct: 321 ggccgtggcggacctcctgg 340
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 26      gctcgccgccgccgttgccgacga 49
               ||||||||||||||| ||||||||
Sbjct: 8735177 gctcgccgccgccgtcgccgacga 8735200
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>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome
          Length = 3052398

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 30     gccgccgccgttgccgacgatgct 53
              |||| |||||||||||||||||||
Sbjct: 952784 gccgacgccgttgccgacgatgct 952807
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>dbj|AK109534.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-C08, full
           insert sequence
          Length = 1278

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 28  tcgccgccgccgttgccgacgatg 51
           |||||||||||| |||||||||||
Sbjct: 877 tcgccgccgccgctgccgacgatg 854
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 29      cgccgccgccgttgccgacg 48
               ||||||||||||||||||||
Sbjct: 2346856 cgccgccgccgttgccgacg 2346875



 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 29    cgccgccgccgttgccgacg 48
             ||||||||||||||||||||
Sbjct: 41456 cgccgccgccgttgccgacg 41475
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>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 27     ctcgccgccgccgttgccga 46
              ||||||||||||||||||||
Sbjct: 322228 ctcgccgccgccgttgccga 322247
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 28      tcgccgccgccgttgccgacgatg 51
               |||||||||||| |||||||||||
Sbjct: 2762193 tcgccgccgccgctgccgacgatg 2762170



 Score = 38.2 bits (19), Expect = 5.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 27      ctcgccgccgccgttgccgacga 49
               |||||||||||||| ||||||||
Sbjct: 5674644 ctcgccgccgccgtcgccgacga 5674622
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>emb|AL928758.3|CNS08CBV Oryza sativa chromosome 12, . BAC OSJNBb0075N21 of library OSJNBb from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 145539

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 28     tcgccgccgccgttgccgacgatg 51
              |||||||||||| |||||||||||
Sbjct: 108198 tcgccgccgccgctgccgacgatg 108221
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>emb|AL954632.3|CNS08CD0 Oryza sativa chromosome 12, . BAC OSJNBa0031E02 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 151878

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 28     tcgccgccgccgttgccgacgatg 51
              |||||||||||| |||||||||||
Sbjct: 131174 tcgccgccgccgctgccgacgatg 131151
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>gb|AC101807.12| Mus musculus chromosome 18, clone RP24-251J22, complete sequence
          Length = 171409

 Score = 38.2 bits (19), Expect = 5.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 48    gatgcttccgttcgaggagcagg 70
             ||||||||| |||||||||||||
Sbjct: 69501 gatgcttccattcgaggagcagg 69523
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>ref|XM_550262.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 873

 Score = 38.2 bits (19), Expect = 5.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 27  ctcgccgccgccgttgccg 45
           |||||||||||||||||||
Sbjct: 696 ctcgccgccgccgttgccg 678
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>ref|XM_479726.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3092

 Score = 38.2 bits (19), Expect = 5.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 27   ctcgccgccgccgttgccg 45
            |||||||||||||||||||
Sbjct: 1127 ctcgccgccgccgttgccg 1109
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>gb|AC134927.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1036C05,
             complete sequence
          Length = 143400

 Score = 38.2 bits (19), Expect = 5.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 20    gaaccagctcgccgccgcc 38
             |||||||||||||||||||
Sbjct: 13215 gaaccagctcgccgccgcc 13233
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>gb|AC135424.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0015F11,
              complete sequence
          Length = 177574

 Score = 38.2 bits (19), Expect = 5.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 20     gaaccagctcgccgccgcc 38
              |||||||||||||||||||
Sbjct: 147794 gaaccagctcgccgccgcc 147812
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>gb|AC134344.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0059K16, complete sequence
          Length = 139615

 Score = 38.2 bits (19), Expect = 5.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 29    cgccgccgccgttgccgac 47
             |||||||||||||||||||
Sbjct: 53491 cgccgccgccgttgccgac 53509
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>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 38.2 bits (19), Expect = 5.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 33      gccgccgttgccgacgatg 51
               |||||||||||||||||||
Sbjct: 3713307 gccgccgttgccgacgatg 3713325
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>gb|AC108500.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1280_A04,
             complete sequence
          Length = 88553

 Score = 38.2 bits (19), Expect = 5.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 63    ggagcaggccgtggcggac 81
             |||||||||||||||||||
Sbjct: 52281 ggagcaggccgtggcggac 52299
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>gb|AC130607.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0017D10,
            complete sequence
          Length = 149870

 Score = 38.2 bits (19), Expect = 5.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 29   cgccgccgccgttgccgac 47
            |||||||||||||||||||
Sbjct: 9553 cgccgccgccgttgccgac 9571
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>gb|AC130729.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0668F02,
              complete sequence
          Length = 178061

 Score = 38.2 bits (19), Expect = 5.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 29     cgccgccgccgttgccgac 47
              |||||||||||||||||||
Sbjct: 152390 cgccgccgccgttgccgac 152408
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>gb|BC055002.1| Mus musculus serine/threonine kinase 32A, mRNA (cDNA clone
           MGC:56750 IMAGE:6313304), complete cds
          Length = 4973

 Score = 38.2 bits (19), Expect = 5.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 48  gatgcttccgttcgaggagcagg 70
           ||||||||| |||||||||||||
Sbjct: 156 gatgcttccattcgaggagcagg 134
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>ref|NM_178749.2| Mus musculus serine/threonine kinase 32A (Stk32a), mRNA
          Length = 3766

 Score = 38.2 bits (19), Expect = 5.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 48  gatgcttccgttcgaggagcagg 70
           ||||||||| |||||||||||||
Sbjct: 137 gatgcttccattcgaggagcagg 115
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>gb|AY523976.1|AY523972S5 Azospirillum brasilense plasmid 90 MDa, partial sequence
          Length = 32896

 Score = 38.2 bits (19), Expect = 5.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 64    gagcaggccgtggcggacc 82
             |||||||||||||||||||
Sbjct: 20808 gagcaggccgtggcggacc 20790
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>gb|AY459343.1| Oryza sativa (japonica cultivar-group) clone CL018501.1 R2R3-MYB gene
             region
          Length = 18906

 Score = 38.2 bits (19), Expect = 5.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 27    ctcgccgccgccgttgccg 45
             |||||||||||||||||||
Sbjct: 18151 ctcgccgccgccgttgccg 18133
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>gb|AY245455.1| Hordeum vulgare subsp. vulgare thioredoxin h isoform 2 mRNA,
          complete cds
          Length = 369

 Score = 38.2 bits (19), Expect = 5.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 30 gccgccgccgttgccgacg 48
          |||||||||||||||||||
Sbjct: 26 gccgccgccgttgccgacg 8
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>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome
          Length = 4171146

 Score = 38.2 bits (19), Expect = 5.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 28      tcgccgccgccgttgccga 46
               |||||||||||||||||||
Sbjct: 2125168 tcgccgccgccgttgccga 2125186
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>gb|AC087726.36| Chlamydomonas reinhardtii clone cr-40a20, complete sequence
          Length = 168794

 Score = 38.2 bits (19), Expect = 5.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 70    gccgtggcggacctcctggagga 92
             |||||||||||| ||||||||||
Sbjct: 89164 gccgtggcggacttcctggagga 89186
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>ref|NM_166393.1| Drosophila melanogaster CG30143-RA (CG30143), mRNA
          Length = 1496

 Score = 38.2 bits (19), Expect = 5.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 41   tgccgacgatgcttccgtt 59
            |||||||||||||||||||
Sbjct: 1248 tgccgacgatgcttccgtt 1230
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 38.2 bits (19), Expect = 5.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 35      cgccgttgccgacgatgcttccg 57
               ||||||||||||||||| |||||
Sbjct: 2010540 cgccgttgccgacgatgattccg 2010518
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>gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome
          Length = 2628784

 Score = 38.2 bits (19), Expect = 5.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 30     gccgccgccgttgccgacgatgc 52
              ||||||||||||| |||||||||
Sbjct: 475705 gccgccgccgttgacgacgatgc 475683
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 38.2 bits (19), Expect = 5.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 21    aaccagctcgccgccgccg 39
             |||||||||||||||||||
Sbjct: 95376 aaccagctcgccgccgccg 95358
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>dbj|AK036266.1| Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length
           enriched library, clone:9630050F05 product:SIMILAR TO
           SERINE THREONINE KINASE 32 homolog [Homo sapiens], full
           insert sequence
          Length = 3766

 Score = 38.2 bits (19), Expect = 5.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 48  gatgcttccgttcgaggagcagg 70
           ||||||||| |||||||||||||
Sbjct: 137 gatgcttccattcgaggagcagg 115
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>dbj|AK042599.1| Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length
           enriched library, clone:A730009C22 product:weakly
           similar to SERINE/THREONINE PROTEIN KINASE [Mus
           musculus], full insert sequence
          Length = 1927

 Score = 38.2 bits (19), Expect = 5.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 48  gatgcttccgttcgaggagcagg 70
           ||||||||| |||||||||||||
Sbjct: 250 gatgcttccattcgaggagcagg 228
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>dbj|AK044474.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library,
           clone:A930015B13 product:SIMILAR TO SERINE THREONINE
           KINASE 32 homolog [Homo sapiens], full insert sequence
          Length = 2477

 Score = 38.2 bits (19), Expect = 5.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 48  gatgcttccgttcgaggagcagg 70
           ||||||||| |||||||||||||
Sbjct: 146 gatgcttccattcgaggagcagg 124
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>gb|AC091635.1|AC091635 Drosophila melanogaster, chromosome 2R, region 56F-57A, BAC clone
              BACR10H12, complete sequence
          Length = 166168

 Score = 38.2 bits (19), Expect = 5.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 41     tgccgacgatgcttccgtt 59
              |||||||||||||||||||
Sbjct: 163880 tgccgacgatgcttccgtt 163862
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8,
              complete sequence
          Length = 28434780

 Score = 38.2 bits (19), Expect = 5.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 27     ctcgccgccgccgttgccg 45
              |||||||||||||||||||
Sbjct: 491707 ctcgccgccgccgttgccg 491689
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 38.2 bits (19), Expect = 5.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 63       ggagcaggccgtggcggac 81
                |||||||||||||||||||
Sbjct: 22639743 ggagcaggccgtggcggac 22639761



 Score = 38.2 bits (19), Expect = 5.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 29       cgccgccgccgttgccgac 47
                |||||||||||||||||||
Sbjct: 20011228 cgccgccgccgttgccgac 20011246



 Score = 38.2 bits (19), Expect = 5.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 20       gaaccagctcgccgccgcc 38
                |||||||||||||||||||
Sbjct: 16062045 gaaccagctcgccgccgcc 16062063



 Score = 38.2 bits (19), Expect = 5.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 29       cgccgccgccgttgccgac 47
                |||||||||||||||||||
Sbjct: 14637197 cgccgccgccgttgccgac 14637215
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 38.2 bits (19), Expect = 5.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 21       aaccagctcgccgccgccg 39
                |||||||||||||||||||
Sbjct: 29387195 aaccagctcgccgccgccg 29387177
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 38.2 bits (19), Expect = 5.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 27      ctcgccgccgccgttgccg 45
               |||||||||||||||||||
Sbjct: 3519955 ctcgccgccgccgttgccg 3519973
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>gb|AC008347.2|AC008347 Drosophila melanogaster, chromosome 2R, region 57A-57A, BAC clone
             BACR03N16, complete sequence
          Length = 165519

 Score = 38.2 bits (19), Expect = 5.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 41    tgccgacgatgcttccgtt 59
             |||||||||||||||||||
Sbjct: 57216 tgccgacgatgcttccgtt 57198
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>dbj|AP004161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1311_H06
          Length = 139868

 Score = 38.2 bits (19), Expect = 5.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 21    aaccagctcgccgccgccg 39
             |||||||||||||||||||
Sbjct: 38067 aaccagctcgccgccgccg 38049
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>dbj|AP003339.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OJ1276_B06
          Length = 175174

 Score = 38.2 bits (19), Expect = 5.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 27    ctcgccgccgccgttgccg 45
             |||||||||||||||||||
Sbjct: 88023 ctcgccgccgccgttgccg 88041
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>dbj|AP004584.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0007D08
          Length = 183142

 Score = 38.2 bits (19), Expect = 5.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 27    ctcgccgccgccgttgccg 45
             |||||||||||||||||||
Sbjct: 81667 ctcgccgccgccgttgccg 81649
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>dbj|AK109954.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-159-A10, full
            insert sequence
          Length = 3092

 Score = 38.2 bits (19), Expect = 5.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 27   ctcgccgccgccgttgccg 45
            |||||||||||||||||||
Sbjct: 1128 ctcgccgccgccgttgccg 1110
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>dbj|AK105787.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-H01, full
           insert sequence
          Length = 1133

 Score = 38.2 bits (19), Expect = 5.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 29  cgccgccgccgttgccgac 47
           |||||||||||||||||||
Sbjct: 135 cgccgccgccgttgccgac 153
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>gb|AY530952.1| Zea mays unknown (Z576C20.2), putative heme oxygenase 1 (Z576C20.3),
              anthocyanin biosynthesis regulatory protein Pl1_B73
              (Z576C20.4), putative growth-regulating factor 1
              (Z576C20.6), and putative aminoalcoholphosphotransferase
              (Z576C20.14) genes, complete cds; and putative receptor
              protein kinase (Z576C20.21) gene, partial cds
          Length = 155173

 Score = 38.2 bits (19), Expect = 5.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 29     cgccgccgccgttgccgacgatg 51
              |||||||||||| ||||||||||
Sbjct: 153539 cgccgccgccgtcgccgacgatg 153561
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>dbj|AK065362.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013006O19, full
           insert sequence
          Length = 1287

 Score = 38.2 bits (19), Expect = 5.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 29  cgccgccgccgttgccgac 47
           |||||||||||||||||||
Sbjct: 140 cgccgccgccgttgccgac 158
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>gb|AE003792.3| Drosophila melanogaster chromosome 2R, section 58 of 73 of the complete
              sequence
          Length = 256764

 Score = 38.2 bits (19), Expect = 5.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 41     tgccgacgatgcttccgtt 59
              |||||||||||||||||||
Sbjct: 218809 tgccgacgatgcttccgtt 218791
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>gb|AE004969.1| Neisseria gonorrhoeae FA 1090, complete genome
          Length = 2153922

 Score = 38.2 bits (19), Expect = 5.5
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                          
Query: 14      cgaacggaaccagctcgccgccgccgt 40
               ||||||||| ||||| |||||||||||
Sbjct: 1597013 cgaacggaatcagcttgccgccgccgt 1596987
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>dbj|AP002912.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0028E10
          Length = 140791

 Score = 38.2 bits (19), Expect = 5.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 27     ctcgccgccgccgttgccg 45
              |||||||||||||||||||
Sbjct: 106715 ctcgccgccgccgttgccg 106733
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>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome
          Length = 7215267

 Score = 38.2 bits (19), Expect = 5.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 74      tggcggacctcctggagga 92
               |||||||||||||||||||
Sbjct: 5970566 tggcggacctcctggagga 5970548
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>emb|AL954853.5|CNS08CD7 Oryza sativa chromosome 12, . BAC OSJNBb0071I17 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 159056

 Score = 38.2 bits (19), Expect = 5.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 27    ctcgccgccgccgttgccgacga 49
             |||||||||||||| ||||||||
Sbjct: 29174 ctcgccgccgccgtcgccgacga 29152


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,173,204
Number of Sequences: 3902068
Number of extensions: 1173204
Number of successful extensions: 98117
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 95071
Number of HSP's gapped (non-prelim): 3046
length of query: 120
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 99
effective length of database: 17,151,101,840
effective search space: 1697959082160
effective search space used: 1697959082160
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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