ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl11h08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_183904.1| Oryza sativa (japonica cultivar-group), predic... 155 1e-34
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 155 1e-34
3dbj|AP003208.3| Oryza sativa (japonica cultivar-group) genomic D... 155 1e-34
4dbj|AK068195.1| Oryza sativa (japonica cultivar-group) cDNA clon... 155 1e-34
5gb|AY109307.1| Zea mays PCO130268 mRNA sequence 103 4e-19
6emb|Z48540.2|PAATSAGN Pseudomonas aeruginosa atsR, atsB, atsC & ... 44 0.29
7gb|AE004539.1| Pseudomonas aeruginosa PAO1, section 100 of 529 o... 44 0.29
8gb|AE004456.1| Pseudomonas aeruginosa PAO1, section 17 of 529 of... 44 0.29
9gb|AC005609.1| Homo sapiens chromosome 5, BAC clone 203o13 (LBNL... 42 1.1
10gb|DQ452068.1| Homo sapiens lipoprotein, Lp(a) (LPA) gene, compl... 42 1.1
11ref|NG_000016.1| Homo sapiens protocadherin alpha cluster (PCDHA... 42 1.1
12ref|NM_031861.1| Homo sapiens protocadherin alpha 11 (PCDHA11), ... 42 1.1
13ref|NM_031860.1| Homo sapiens protocadherin alpha 10 (PCDHA10), ... 42 1.1
14ref|NM_031859.1| Homo sapiens protocadherin alpha 10 (PCDHA10), ... 42 1.1
15ref|NM_018901.2| Homo sapiens protocadherin alpha 10 (PCDHA10), ... 42 1.1
16ref|NM_018902.3| Homo sapiens protocadherin alpha 11 (PCDHA11), ... 42 1.1
17gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, comp... 42 1.1
18emb|AL596089.19| Human DNA sequence from clone RP11-414A5 on chr... 42 1.1
19gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome 42 1.1
20gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, compl... 42 1.1
21gb|BC043441.2| Homo sapiens protocadherin alpha 6, mRNA (cDNA cl... 42 1.1
22dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, compl... 42 1.1
23gb|AC010610.7| Homo sapiens chromosome 5 clone CTB-56E15, comple... 42 1.1
24gb|AC008704.6| Homo sapiens chromosome 5 clone CTB-77C3, complet... 42 1.1
25gb|AF169689.1|AF169689 Homo sapiens protocadherin alpha 10 alter... 42 1.1
26gb|AC008468.6|AC008468 Homo sapiens chromosome 5 clone CTC-365B8... 42 1.1
27ref|XM_319843.2| Anopheles gambiae str. PEST ENSANGP00000025250 ... 42 1.1
28dbj|AP006565.1| Homo sapiens genomic DNA, chromosome 18 clone:RP... 42 1.1
29gb|AF152307.1|AF152307 Homo sapiens protocadherin alpha 11 (PCDH... 42 1.1
30gb|AF152306.1|AF152306 Homo sapiens protocadherin alpha 10 (PCDH... 42 1.1
31gb|AF152476.1|AF152476 Homo sapiens protocadherin alpha 11 short... 42 1.1
32gb|AF152475.1|AF152475 Homo sapiens protocadherin alpha 10 short... 42 1.1
33gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 42 1.1
34gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome 42 1.1
35gb|AC147596.5| Gallus gallus BAC clone CH261-29A2 from chromosom... 42 1.1
36dbj|AP005121.2| Homo sapiens genomic DNA, chromosome 18 clone:RP... 42 1.1
37emb|AL805923.6| Mouse DNA sequence from clone RP23-65B16 on chro... 42 1.1
38emb|AL359312.18| Human DNA sequence from clone RP11-216E19 on ch... 42 1.1
39gb|AY831449.1| Monocercomonoides sp. PA clone XY cytosolic heat ... 42 1.1
40emb|AJ007609.1|HSAJ7609 Homo sapiens mRNA for protocadherin alph... 42 1.1
41ref|XM_475456.1| Oryza sativa (japonica cultivar-group), predic... 40 4.5
42ref|XM_468354.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.5
43gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 40 4.5
44gb|AC148870.2| Chlamydomonas reinhardtii clone cr-13O11, complet... 40 4.5
45gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome 40 4.5
46gb|AC097175.2| Oryza sativa (japonica cultivar-group) chromosome... 40 4.5
47gb|AC093952.2| Oryza sativa (japonica cultivar-group) chromosome... 40 4.5
48gb|AF005701.1| Citrobacter sp. MAM-1 DNA gyrase beta-subunit (gy... 40 4.5
49gb|AF005699.1| Citrobacter sp. AQ-2 DNA gyrase beta-subunit (gyr... 40 4.5
50gb|AE004303.1| Vibrio cholerae O1 biovar eltor str. N16961 chrom... 40 4.5
51emb|BX842582.1| Mycobacterium tuberculosis H37Rv complete genome... 40 4.5
52emb|BX248345.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 40 4.5
53emb|AJ300543.1|SEN300543 Serratia entomophila partial gyrB gene ... 40 4.5
54emb|AJ300542.1|SEN300542 Serratia entomophila partial gyrB gene ... 40 4.5
55emb|AJ300541.1|SFI300541 Serratia ficaria partial gyrB gene for ... 40 4.5
56emb|AJ300540.1|SFI300540 Serratia ficaria partial gyrB gene for ... 40 4.5
57emb|AJ300536.1|SMA300536 Serratia marcescens partial gyrB gene f... 40 4.5
58emb|AJ300535.1|SMA300535 Serratia marcescens partial gyrB gene f... 40 4.5
59emb|AJ300534.1|SMA300534 Serratia marcescens partial gyrB gene f... 40 4.5
60emb|AJ300533.1|SOD300533 Serratia odorifera partial gyrB gene fo... 40 4.5
61emb|AJ300530.1|SRU300530 Serratia rubidaea partial gyrB gene for... 40 4.5
62gb|AC055782.9| Homo sapiens chromosome 15, clone RP11-528P19, co... 40 4.5
63gb|AC022254.11| Homo sapiens chromosome 15, clone RP11-282M16, c... 40 4.5
64emb|BX323062.10| Zebrafish DNA sequence from clone DKEYP-38H2 in... 40 4.5
65ref|NM_133045.2| Drosophila melanogaster Him CG15064-RA (Him), mRNA 40 4.5
66gb|AY070599.1| Drosophila melanogaster RE70039 full length cDNA 40 4.5
67dbj|AK165756.1| Mus musculus 15 days embryo brain cDNA, RIKEN fu... 40 4.5
68gb|AC011614.8| Drosophila melanogaster, chromosome X, region 16F... 40 4.5
69dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.5
70dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.5
71gb|AC022348.2|AC022348 Drosophila melanogaster, chromosome X, re... 40 4.5
72gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 4.5
73dbj|AP005303.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.5
74emb|BX248245.10| Zebrafish DNA sequence from clone CH211-203M16 ... 40 4.5
75dbj|AP005691.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.5
76emb|Z23098.1|SVDNA S.vulgaris DNA 40 4.5
77dbj|AK106918.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.5
78emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid compl... 40 4.5
79dbj|AK064162.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.5
80dbj|AK062926.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.5
81gb|AE003508.4| Drosophila melanogaster chromosome X, section 60 ... 40 4.5
82gb|AC151602.4| Mus musculus BAC clone RP23-218K15 from chromosom... 40 4.5
83dbj|AB014912.1| Caulobacter henricii gyrB gene for DNA gyrase su... 40 4.5
84dbj|AB014948.1| Serratia rubidaea gyrB gene for DNA gyrase subun... 40 4.5
85dbj|AB014946.1| Serratia marcescens gyrB gene for DNA gyrase sub... 40 4.5 
>ref|NM_183904.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2478

 Score =  155 bits (78), Expect = 1e-34
 Identities = 150/174 (86%)
 Strand = Plus / Plus

                                                                       
Query: 160 atggagatcgcggtgggcgcgctgtcgggcatggtggaggcgctgccgggcaagctggcg 219
           |||||||||||||||||||| ||||| ||||||||||| || ||||||| |||||| |  
Sbjct: 1   atggagatcgcggtgggcgccctgtccggcatggtggacgctctgccggccaagctcggc 60

                                                                       
Query: 220 gagctggtgcagcaggagtacgagctgctctccggcgcccgcggggacgtcgccttcttc 279
           || ||| ||||||||||||||  |||||| |||||||||||||||||||||| |||| ||
Sbjct: 61  gacctgctgcagcaggagtacacgctgctgtccggcgcccgcggggacgtcggcttcctc 120

                                                                 
Query: 280 caggccgagctgaggaccatgcacgccgccgtgctccgctgcgaggccctcgag 333
           ||| |||||||  | |||||| |||||||| | ||||| |||||| ||||||||
Sbjct: 121 cagtccgagctcggcaccatgaacgccgccctcctccggtgcgagtccctcgag 174
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  155 bits (78), Expect = 1e-34
 Identities = 150/174 (86%)
 Strand = Plus / Minus

                                                                            
Query: 160      atggagatcgcggtgggcgcgctgtcgggcatggtggaggcgctgccgggcaagctggcg 219
                |||||||||||||||||||| ||||| ||||||||||| || ||||||| |||||| |  
Sbjct: 13127664 atggagatcgcggtgggcgccctgtccggcatggtggacgctctgccggccaagctcggc 13127605

                                                                            
Query: 220      gagctggtgcagcaggagtacgagctgctctccggcgcccgcggggacgtcgccttcttc 279
                || ||| ||||||||||||||  |||||| |||||||||||||||||||||| |||| ||
Sbjct: 13127604 gacctgctgcagcaggagtacacgctgctgtccggcgcccgcggggacgtcggcttcctc 13127545

                                                                      
Query: 280      caggccgagctgaggaccatgcacgccgccgtgctccgctgcgaggccctcgag 333
                ||| |||||||  | |||||| |||||||| | ||||| |||||| ||||||||
Sbjct: 13127544 cagtccgagctcggcaccatgaacgccgccctcctccggtgcgagtccctcgag 13127491
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>dbj|AP003208.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1158F07
          Length = 139491

 Score =  155 bits (78), Expect = 1e-34
 Identities = 150/174 (86%)
 Strand = Plus / Minus

                                                                          
Query: 160    atggagatcgcggtgggcgcgctgtcgggcatggtggaggcgctgccgggcaagctggcg 219
              |||||||||||||||||||| ||||| ||||||||||| || ||||||| |||||| |  
Sbjct: 103385 atggagatcgcggtgggcgccctgtccggcatggtggacgctctgccggccaagctcggc 103326

                                                                          
Query: 220    gagctggtgcagcaggagtacgagctgctctccggcgcccgcggggacgtcgccttcttc 279
              || ||| ||||||||||||||  |||||| |||||||||||||||||||||| |||| ||
Sbjct: 103325 gacctgctgcagcaggagtacacgctgctgtccggcgcccgcggggacgtcggcttcctc 103266

                                                                    
Query: 280    caggccgagctgaggaccatgcacgccgccgtgctccgctgcgaggccctcgag 333
              ||| |||||||  | |||||| |||||||| | ||||| |||||| ||||||||
Sbjct: 103265 cagtccgagctcggcaccatgaacgccgccctcctccggtgcgagtccctcgag 103212
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>dbj|AK068195.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013146B15, full
           insert sequence
          Length = 2761

 Score =  155 bits (78), Expect = 1e-34
 Identities = 150/174 (86%)
 Strand = Plus / Plus

                                                                       
Query: 160 atggagatcgcggtgggcgcgctgtcgggcatggtggaggcgctgccgggcaagctggcg 219
           |||||||||||||||||||| ||||| ||||||||||| || ||||||| |||||| |  
Sbjct: 158 atggagatcgcggtgggcgccctgtccggcatggtggacgctctgccggccaagctcggc 217

                                                                       
Query: 220 gagctggtgcagcaggagtacgagctgctctccggcgcccgcggggacgtcgccttcttc 279
           || ||| ||||||||||||||  |||||| |||||||||||||||||||||| |||| ||
Sbjct: 218 gacctgctgcagcaggagtacacgctgctgtccggcgcccgcggggacgtcggcttcctc 277

                                                                 
Query: 280 caggccgagctgaggaccatgcacgccgccgtgctccgctgcgaggccctcgag 333
           ||| |||||||  | |||||| |||||||| | ||||| |||||| ||||||||
Sbjct: 278 cagtccgagctcggcaccatgaacgccgccctcctccggtgcgagtccctcgag 331
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>gb|AY109307.1| Zea mays PCO130268 mRNA sequence
          Length = 3927

 Score =  103 bits (52), Expect = 4e-19
 Identities = 100/116 (86%)
 Strand = Plus / Plus

                                                                        
Query: 151  gccggcgggatggagatcgcggtgggcgcgctgtcgggcatggtggaggcgctgccgggc 210
            ||||||| |||||| |||| |||||| |||||||||||||| ||||| ||| ||||||| 
Sbjct: 1268 gccggcgagatggacatcgtggtgggtgcgctgtcgggcatagtggacgcgttgccgggg 1327

                                                                    
Query: 211  aagctggcggagctggtgcagcaggagtacgagctgctctccggcgcccgcgggga 266
            ||||| |  |||||| || |||||||||| | |||||||||||||| |||||||||
Sbjct: 1328 aagctcggcgagctgctggagcaggagtatgcgctgctctccggcgtccgcgggga 1383
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>emb|Z48540.2|PAATSAGN Pseudomonas aeruginosa atsR, atsB, atsC & atsA genes
          Length = 6315

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 204  gccgggcaagctggcggagctg 225
            ||||||||||||||||||||||
Sbjct: 5605 gccgggcaagctggcggagctg 5626
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>gb|AE004539.1| Pseudomonas aeruginosa PAO1, section 100 of 529 of the complete genome
          Length = 25022

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 198   ggcgctgccgggcaagctggcggagc 223
             ||||||||||||||||||||| ||||
Sbjct: 13548 ggcgctgccgggcaagctggccgagc 13573
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>gb|AE004456.1| Pseudomonas aeruginosa PAO1, section 17 of 529 of the complete genome
          Length = 12534

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 204  gccgggcaagctggcggagctg 225
            ||||||||||||||||||||||
Sbjct: 3489 gccgggcaagctggcggagctg 3468
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>gb|AC005609.1| Homo sapiens chromosome 5, BAC clone 203o13 (LBNL H155), complete
             sequence
          Length = 157970

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 212   agctggcggagctggtgcagc 232
             |||||||||||||||||||||
Sbjct: 35889 agctggcggagctggtgcagc 35869



 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 212   agctggcggagctggtgcagc 232
             |||||||||||||||||||||
Sbjct: 22831 agctggcggagctggtgcagc 22811
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>gb|DQ452068.1| Homo sapiens lipoprotein, Lp(a) (LPA) gene, complete cds
          Length = 136345

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 122   aggagtctgttctgttctgtt 142
             |||||||||||||||||||||
Sbjct: 55281 aggagtctgttctgttctgtt 55301



 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 122   aggagtctgttctgttctgtt 142
             |||||||||||||||||||||
Sbjct: 33090 aggagtctgttctgttctgtt 33110
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>ref|NG_000016.1| Homo sapiens protocadherin alpha cluster (PCDHA@) on chromosome 5
          Length = 297736

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 212    agctggcggagctggtgcagc 232
              |||||||||||||||||||||
Sbjct: 135140 agctggcggagctggtgcagc 135160



 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 212    agctggcggagctggtgcagc 232
              |||||||||||||||||||||
Sbjct: 122082 agctggcggagctggtgcagc 122102
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>ref|NM_031861.1| Homo sapiens protocadherin alpha 11 (PCDHA11), transcript variant 2,
            mRNA
          Length = 3291

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 212  agctggcggagctggtgcagc 232
            |||||||||||||||||||||
Sbjct: 1022 agctggcggagctggtgcagc 1042
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>ref|NM_031860.1| Homo sapiens protocadherin alpha 10 (PCDHA10), transcript variant
           3, mRNA
          Length = 4465

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 212 agctggcggagctggtgcagc 232
           |||||||||||||||||||||
Sbjct: 161 agctggcggagctggtgcagc 181
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>ref|NM_031859.1| Homo sapiens protocadherin alpha 10 (PCDHA10), transcript variant
           2, mRNA
          Length = 2535

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 212 agctggcggagctggtgcagc 232
           |||||||||||||||||||||
Sbjct: 161 agctggcggagctggtgcagc 181
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>ref|NM_018901.2| Homo sapiens protocadherin alpha 10 (PCDHA10), transcript variant
           1, mRNA
          Length = 5254

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 212 agctggcggagctggtgcagc 232
           |||||||||||||||||||||
Sbjct: 161 agctggcggagctggtgcagc 181
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>ref|NM_018902.3| Homo sapiens protocadherin alpha 11 (PCDHA11), transcript variant 1,
            mRNA
          Length = 6115

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 212  agctggcggagctggtgcagc 232
            |||||||||||||||||||||
Sbjct: 1022 agctggcggagctggtgcagc 1042
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>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome
          Length = 5928787

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 202    ctgccgggcaagctggcggagctgg 226
              ||||||| |||||||||||||||||
Sbjct: 304279 ctgccggtcaagctggcggagctgg 304255
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>emb|AL596089.19| Human DNA sequence from clone RP11-414A5 on chromosome 6 Contains the 3'
              end of the LPA gene for lipoprotein (Lp(a)) and a CpG
              island, complete sequence
          Length = 135751

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 122    aggagtctgttctgttctgtt 142
              |||||||||||||||||||||
Sbjct: 117886 aggagtctgttctgttctgtt 117866



 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 122   aggagtctgttctgttctgtt 142
             |||||||||||||||||||||
Sbjct: 95695 aggagtctgttctgttctgtt 95675
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>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome
          Length = 4406967

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 207     gggcaagctggcggagctggt 227
               |||||||||||||||||||||
Sbjct: 3104636 gggcaagctggcggagctggt 3104656
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>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence
          Length = 3363523

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 222     gctggtgcagcaggagtacgagctg 246
               |||||||||||||||| ||||||||
Sbjct: 1881884 gctggtgcagcaggagcacgagctg 1881860



 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 270     cgccttcttccaggccgagc 289
               ||||||||||||||||||||
Sbjct: 3165369 cgccttcttccaggccgagc 3165388
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>gb|BC043441.2| Homo sapiens protocadherin alpha 6, mRNA (cDNA clone IMAGE:5297539)
          Length = 3092

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 212  agctggcggagctggtgcagc 232
            |||||||||||||||||||||
Sbjct: 1102 agctggcggagctggtgcagc 1082
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>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome
          Length = 4171146

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 198    ggcgctgccgggcaagctggc 218
              |||||||||||||||||||||
Sbjct: 491118 ggcgctgccgggcaagctggc 491138



 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 202  ctgccgggcaagctggcgga 221
            ||||||||||||||||||||
Sbjct: 4844 ctgccgggcaagctggcgga 4863
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>gb|AC010610.7| Homo sapiens chromosome 5 clone CTB-56E15, complete sequence
          Length = 23771

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 121   gaggagtctgttctgttctgttgtc 145
             |||| ||||||||||||||||||||
Sbjct: 17173 gaggcgtctgttctgttctgttgtc 17197
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>gb|AC008704.6| Homo sapiens chromosome 5 clone CTB-77C3, complete sequence
          Length = 95906

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 121   gaggagtctgttctgttctgttgtc 145
             |||| ||||||||||||||||||||
Sbjct: 95202 gaggcgtctgttctgttctgttgtc 95178
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>gb|AF169689.1|AF169689 Homo sapiens protocadherin alpha 10 alternate isoform
           (PCDH-alpha10) mRNA, complete cds
          Length = 2201

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 212 agctggcggagctggtgcagc 232
           |||||||||||||||||||||
Sbjct: 161 agctggcggagctggtgcagc 181
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>gb|AC008468.6|AC008468 Homo sapiens chromosome 5 clone CTC-365B8, complete sequence
          Length = 117096

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 212   agctggcggagctggtgcagc 232
             |||||||||||||||||||||
Sbjct: 59923 agctggcggagctggtgcagc 59903



 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 212   agctggcggagctggtgcagc 232
             |||||||||||||||||||||
Sbjct: 46862 agctggcggagctggtgcagc 46842
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>ref|XM_319843.2| Anopheles gambiae str. PEST ENSANGP00000025250
           (ENSANGG00000014044), partial mRNA
          Length = 2667

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 228 gcagcaggagtacgagctgct 248
           |||||||||||||||||||||
Sbjct: 594 gcagcaggagtacgagctgct 614
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>dbj|AP006565.1| Homo sapiens genomic DNA, chromosome 18 clone:RP11-1157N02_B, complete
             sequence
          Length = 93824

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 17    gccaccaccaaccgcaagcaggcga 41
             ||||||||||||||||| |||||||
Sbjct: 63774 gccaccaccaaccgcaaccaggcga 63750
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>gb|AF152307.1|AF152307 Homo sapiens protocadherin alpha 11 (PCDH-alpha11) mRNA, complete
           cds
          Length = 5257

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 212 agctggcggagctggtgcagc 232
           |||||||||||||||||||||
Sbjct: 164 agctggcggagctggtgcagc 184
to top
>gb|AF152306.1|AF152306 Homo sapiens protocadherin alpha 10 (PCDH-alpha10) mRNA, complete
           cds
          Length = 5254

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 212 agctggcggagctggtgcagc 232
           |||||||||||||||||||||
Sbjct: 161 agctggcggagctggtgcagc 181
to top
>gb|AF152476.1|AF152476 Homo sapiens protocadherin alpha 11 short form protein
           (PCDH-alpha11) variable region sequence, complete cds
          Length = 2433

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 212 agctggcggagctggtgcagc 232
           |||||||||||||||||||||
Sbjct: 164 agctggcggagctggtgcagc 184
to top
>gb|AF152475.1|AF152475 Homo sapiens protocadherin alpha 10 short form protein
           (PCDH-alpha10) variable region sequence, complete cds
          Length = 2535

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 212 agctggcggagctggtgcagc 232
           |||||||||||||||||||||
Sbjct: 161 agctggcggagctggtgcagc 181
to top
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 267     cgtcgccttcttccaggccga 287
               |||||||||||||||||||||
Sbjct: 1810439 cgtcgccttcttccaggccga 1810419
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>gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome
          Length = 4096345

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 201     gctgccgggcaagctggcgga 221
               |||||||||||||||||||||
Sbjct: 3617027 gctgccgggcaagctggcgga 3617047
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>gb|AC147596.5| Gallus gallus BAC clone CH261-29A2 from chromosome unknown, complete
             sequence
          Length = 190789

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 55    gttcagtcttcagtgtcaggt 75
             |||||||||||||||||||||
Sbjct: 27940 gttcagtcttcagtgtcaggt 27920
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>dbj|AP005121.2| Homo sapiens genomic DNA, chromosome 18 clone:RP11-527H14, complete
             sequence
          Length = 155150

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 17    gccaccaccaaccgcaagcaggcga 41
             ||||||||||||||||| |||||||
Sbjct: 13100 gccaccaccaaccgcaaccaggcga 13076
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>emb|AL805923.6| Mouse DNA sequence from clone RP23-65B16 on chromosome 4, complete
             sequence
          Length = 182774

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 115   gatccagaggagtctgttctg 135
             |||||||||||||||||||||
Sbjct: 69945 gatccagaggagtctgttctg 69965
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>emb|AL359312.18| Human DNA sequence from clone RP11-216E19 on chromosome 18, complete
             sequence
          Length = 143463

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 17    gccaccaccaaccgcaagcaggcga 41
             ||||||||||||||||| |||||||
Sbjct: 37968 gccaccaccaaccgcaaccaggcga 37944
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>gb|AY831449.1| Monocercomonoides sp. PA clone XY cytosolic heat shock protein
            70-like protein mRNA, complete cds
          Length = 2259

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 213  gctggcggagctggtgcagcaggag 237
            ||||| |||||||||||||||||||
Sbjct: 1885 gctggtggagctggtgcagcaggag 1909
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>emb|AJ007609.1|HSAJ7609 Homo sapiens mRNA for protocadherin alpha 11 (PCDHA11 gene)
          Length = 3856

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 212  agctggcggagctggtgcagc 232
            |||||||||||||||||||||
Sbjct: 1021 agctggcggagctggtgcagc 1041
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>ref|XM_475456.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 303

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 75  tccacgcccatcctcgccgccggc 98
           |||||| |||||||||||||||||
Sbjct: 233 tccacgtccatcctcgccgccggc 210
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>ref|XM_468354.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1522

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 82  ccatcctcgccgccggcggc 101
           ||||||||||||||||||||
Sbjct: 997 ccatcctcgccgccggcggc 978
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>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 206     cgggcaagctggcggagctg 225
               ||||||||||||||||||||
Sbjct: 3657037 cgggcaagctggcggagctg 3657056
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>gb|AC148870.2| Chlamydomonas reinhardtii clone cr-13O11, complete sequence
          Length = 56858

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 192   ggtggaggcgctgccgggca 211
             ||||||||||||||||||||
Sbjct: 17173 ggtggaggcgctgccgggca 17192
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>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 85      tcctcgccgccggcggcacc 104
               ||||||||||||||||||||
Sbjct: 1979908 tcctcgccgccggcggcacc 1979889
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>gb|AC097175.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1119_H02,
             complete sequence
          Length = 138584

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 75    tccacgcccatcctcgccgccggc 98
             |||||| |||||||||||||||||
Sbjct: 37932 tccacgtccatcctcgccgccggc 37909
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>gb|AC093952.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1004_E02,
              complete sequence
          Length = 127642

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 75     tccacgcccatcctcgccgccggc 98
              |||||| |||||||||||||||||
Sbjct: 114918 tccacgtccatcctcgccgccggc 114895
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>gb|AF005701.1| Citrobacter sp. MAM-1 DNA gyrase beta-subunit (gyrB) gene, partial
           cds
          Length = 1256

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 202 ctgccgggcaagctggcgga 221
           ||||||||||||||||||||
Sbjct: 934 ctgccgggcaagctggcgga 953
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>gb|AF005699.1| Citrobacter sp. AQ-2 DNA gyrase beta-subunit (gyrB) gene, partial
           cds
          Length = 1256

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 202 ctgccgggcaagctggcgga 221
           ||||||||||||||||||||
Sbjct: 934 ctgccgggcaagctggcgga 953
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>gb|AE004303.1| Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, section 211
            of 251 of the complete chromosome
          Length = 13625

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 9    ttattcgcgccaccaccaac 28
            ||||||||||||||||||||
Sbjct: 6305 ttattcgcgccaccaccaac 6324
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>emb|BX842582.1| Mycobacterium tuberculosis H37Rv complete genome; segment 11/13
          Length = 349563

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 206    cgggcaagctggcggagctg 225
              ||||||||||||||||||||
Sbjct: 194475 cgggcaagctggcggagctg 194494
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>emb|BX248345.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 12/14
          Length = 308050

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 206    cgggcaagctggcggagctg 225
              ||||||||||||||||||||
Sbjct: 173726 cgggcaagctggcggagctg 173745
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>emb|AJ300543.1|SEN300543 Serratia entomophila partial gyrB gene for DNA gyrase B subunit
           strain CIP 102919T, ATCC 43705T, Biotype 1
          Length = 972

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 202 ctgccgggcaagctggcgga 221
           ||||||||||||||||||||
Sbjct: 903 ctgccgggcaagctggcgga 922
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>emb|AJ300542.1|SEN300542 Serratia entomophila partial gyrB gene for DNA gyrase B subunit
           strain strain A15, Biotype 2
          Length = 972

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 202 ctgccgggcaagctggcgga 221
           ||||||||||||||||||||
Sbjct: 903 ctgccgggcaagctggcgga 922
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>emb|AJ300541.1|SFI300541 Serratia ficaria partial gyrB gene for DNA gyrase B subunit strain
           CIP 79.23T, ATCC 33105T, O-type 1
          Length = 972

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 202 ctgccgggcaagctggcgga 221
           ||||||||||||||||||||
Sbjct: 903 ctgccgggcaagctggcgga 922
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>emb|AJ300540.1|SFI300540 Serratia ficaria partial gyrB gene for DNA gyrase B subunit strain
           strain G4037, O-type 2
          Length = 972

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 202 ctgccgggcaagctggcgga 221
           ||||||||||||||||||||
Sbjct: 903 ctgccgggcaagctggcgga 922
to top
>emb|AJ300536.1|SMA300536 Serratia marcescens partial gyrB gene for DNA gyrase B subunit
           strain CIP 103235T, ATCC 13880T, Biotype A2a
          Length = 972

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 202 ctgccgggcaagctggcgga 221
           ||||||||||||||||||||
Sbjct: 903 ctgccgggcaagctggcgga 922
to top
>emb|AJ300535.1|SMA300535 Serratia marcescens partial gyrB gene for DNA gyrase B subunit
           strain strain G3770, Biotype A6a
          Length = 972

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 202 ctgccgggcaagctggcgga 221
           ||||||||||||||||||||
Sbjct: 903 ctgccgggcaagctggcgga 922
to top
>emb|AJ300534.1|SMA300534 Serratia marcescens partial gyrB gene for DNA gyrase B subunit
           strain strain G81, Biotype TCT
          Length = 972

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 202 ctgccgggcaagctggcgga 221
           ||||||||||||||||||||
Sbjct: 903 ctgccgggcaagctggcgga 922
to top
>emb|AJ300533.1|SOD300533 Serratia odorifera partial gyrB gene for DNA gyrase B subunit
           strain CIP 79.1T, ATCC 33077T
          Length = 972

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 202 ctgccgggcaagctggcgga 221
           ||||||||||||||||||||
Sbjct: 903 ctgccgggcaagctggcgga 922
to top
>emb|AJ300530.1|SRU300530 Serratia rubidaea partial gyrB gene for DNA gyrase B subunit strain
           CIP 103234T, ATCC 27593T
          Length = 972

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 202 ctgccgggcaagctggcgga 221
           ||||||||||||||||||||
Sbjct: 903 ctgccgggcaagctggcgga 922
to top
>gb|AC055782.9| Homo sapiens chromosome 15, clone RP11-528P19, complete sequence
          Length = 172697

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 187   ggcatggtggaggcgctgcc 206
             ||||||||||||||||||||
Sbjct: 60837 ggcatggtggaggcgctgcc 60818
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>gb|AC022254.11| Homo sapiens chromosome 15, clone RP11-282M16, complete sequence
          Length = 188601

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 187   ggcatggtggaggcgctgcc 206
             ||||||||||||||||||||
Sbjct: 53213 ggcatggtggaggcgctgcc 53232
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>emb|BX323062.10| Zebrafish DNA sequence from clone DKEYP-38H2 in linkage group 5, complete
              sequence
          Length = 199133

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 56     ttcagtcttcagtgtcaggt 75
              ||||||||||||||||||||
Sbjct: 175330 ttcagtcttcagtgtcaggt 175311
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>ref|NM_133045.2| Drosophila melanogaster Him CG15064-RA (Him), mRNA
          Length = 919

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 215 tggcggagctggtgcagcag 234
           ||||||||||||||||||||
Sbjct: 636 tggcggagctggtgcagcag 655
to top
>gb|AY070599.1| Drosophila melanogaster RE70039 full length cDNA
          Length = 937

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 215 tggcggagctggtgcagcag 234
           ||||||||||||||||||||
Sbjct: 636 tggcggagctggtgcagcag 655
to top
>dbj|AK165756.1| Mus musculus 15 days embryo brain cDNA, RIKEN full-length enriched
           library, clone:G630055J19 product:unclassifiable, full
           insert sequence
          Length = 3668

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 198 ggcgctgccgggcaagctgg 217
           ||||||||||||||||||||
Sbjct: 344 ggcgctgccgggcaagctgg 325
to top
>gb|AC011614.8| Drosophila melanogaster, chromosome X, region 16F-17A, BAC clone
             BACR48L05, complete sequence
          Length = 177138

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 215   tggcggagctggtgcagcag 234
             ||||||||||||||||||||
Sbjct: 28021 tggcggagctggtgcagcag 28002
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 75       tccacgcccatcctcgccgccggc 98
                |||||| |||||||||||||||||
Sbjct: 23834097 tccacgtccatcctcgccgccggc 23834074
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 82       ccatcctcgccgccggcggc 101
                ||||||||||||||||||||
Sbjct: 34814603 ccatcctcgccgccggcggc 34814584
to top
>gb|AC022348.2|AC022348 Drosophila melanogaster, chromosome X, region 17E-18A, BAC clone
             BACR32F24, complete sequence
          Length = 162307

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 215   tggcggagctggtgcagcag 234
             ||||||||||||||||||||
Sbjct: 21476 tggcggagctggtgcagcag 21495
to top
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 212     agctggcggagctggtgcag 231
               ||||||||||||||||||||
Sbjct: 1235573 agctggcggagctggtgcag 1235554
to top
>dbj|AP005303.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0016F11
          Length = 134907

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 82     ccatcctcgccgccggcggc 101
              ||||||||||||||||||||
Sbjct: 132451 ccatcctcgccgccggcggc 132432
to top
>emb|BX248245.10| Zebrafish DNA sequence from clone CH211-203M16 in linkage group 10,
             complete sequence
          Length = 78415

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 56    ttcagtcttcagtgtcaggt 75
             ||||||||||||||||||||
Sbjct: 43587 ttcagtcttcagtgtcaggt 43568
to top
>dbj|AP005691.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0053L11
          Length = 147123

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 82    ccatcctcgccgccggcggc 101
             ||||||||||||||||||||
Sbjct: 36198 ccatcctcgccgccggcggc 36179
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>emb|Z23098.1|SVDNA S.vulgaris DNA
          Length = 754

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 128 ctgttctgttctgttgtcaa 147
           ||||||||||||||||||||
Sbjct: 500 ctgttctgttctgttgtcaa 481
to top
>dbj|AK106918.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-B02, full
           insert sequence
          Length = 1522

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 82  ccatcctcgccgccggcggc 101
           ||||||||||||||||||||
Sbjct: 997 ccatcctcgccgccggcggc 978
to top
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence
          Length = 2094509

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 198     ggcgctgccgggcaagctgg 217
               ||||||||||||||||||||
Sbjct: 1644916 ggcgctgccgggcaagctgg 1644897
to top
>dbj|AK064162.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-103-G07, full
           insert sequence
          Length = 671

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 75  tccacgcccatcctcgccgccggc 98
           |||||| |||||||||||||||||
Sbjct: 291 tccacgtccatcctcgccgccggc 268
to top
>dbj|AK062926.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-109-A02, full
           insert sequence
          Length = 516

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 75  tccacgcccatcctcgccgccggc 98
           |||||| |||||||||||||||||
Sbjct: 387 tccacgtccatcctcgccgccggc 364
to top
>gb|AE003508.4| Drosophila melanogaster chromosome X, section 60 of 74 of the complete
             sequence
          Length = 290619

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 215   tggcggagctggtgcagcag 234
             ||||||||||||||||||||
Sbjct: 58070 tggcggagctggtgcagcag 58089
to top
>gb|AC151602.4| Mus musculus BAC clone RP23-218K15 from chromosome 7, complete sequence
          Length = 249504

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 198    ggcgctgccgggcaagctgg 217
              ||||||||||||||||||||
Sbjct: 223842 ggcgctgccgggcaagctgg 223823
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>dbj|AB014912.1| Caulobacter henricii gyrB gene for DNA gyrase subunit B, partial
           cds, clone:gy10025.icb
          Length = 1206

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 202 ctgccgggcaagctggcgga 221
           ||||||||||||||||||||
Sbjct: 928 ctgccgggcaagctggcgga 947
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>dbj|AB014948.1| Serratia rubidaea gyrB gene for DNA gyrase subunit B, partial cds,
           clone:gy10061.icb
          Length = 1170

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 202 ctgccgggcaagctggcgga 221
           ||||||||||||||||||||
Sbjct: 892 ctgccgggcaagctggcgga 911
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>dbj|AB014946.1| Serratia marcescens gyrB gene for DNA gyrase subunit B, partial
           cds, clone:gy10059.icb
          Length = 1167

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 202 ctgccgggcaagctggcgga 221
           ||||||||||||||||||||
Sbjct: 889 ctgccgggcaagctggcgga 908


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,842,073
Number of Sequences: 3902068
Number of extensions: 2842073
Number of successful extensions: 77546
Number of sequences better than 10.0: 85
Number of HSP's better than 10.0 without gapping: 85
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 76345
Number of HSP's gapped (non-prelim): 1201
length of query: 340
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 318
effective length of database: 17,147,199,772
effective search space: 5452809527496
effective search space used: 5452809527496
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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