ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl11h01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY532594.1| Triticum aestivum minichromosomal maintenance fac... 533 e-148
2gb|AY532593.1| Triticum aestivum minichromosomal maintenance fac... 432 e-118
3dbj|AK121422.1| Oryza sativa (japonica cultivar-group) cDNA clon... 198 9e-48
4gb|AC131343.4| Oryza sativa (japonica cultivar-group) chromosome... 192 6e-46
5dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 192 6e-46
6gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 192 6e-46
7ref|XM_468862.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.32
8gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 44 0.32
9gb|AC106887.3| Oryza sativa chromosome 3 BAC OSJNBa0054H04 genom... 44 0.32
10dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.32
11dbj|AK065720.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.32
12ref|XM_466933.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.3
13gb|BT015953.1| Drosophila melanogaster SD09647 full insert cDNA 42 1.3
14gb|BT025193.1| Drosophila melanogaster FI01127 full insert cDNA 42 1.3
15gb|AY223810.1| Rhodococcus erythropolis linear plasmid pBD2, com... 42 1.3
16gb|AY861166.1| Cottus gobio microsatellite Cott105 sequence 42 1.3
17gb|AC023740.4| Drosophila melanogaster X BAC RP98-27J18 (Roswell... 42 1.3
18ref|NM_132004.2| Drosophila melanogaster CG4136-RA (CG4136), mRNA 42 1.3
19gb|AY070708.1| Drosophila melanogaster SD01032 full length cDNA 42 1.3
20gb|AE016817.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 42 1.3
21dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
22gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome 42 1.3
23dbj|AP004067.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
24emb|AJ234640.1|HVU234640 Hordeum vulgare genomic DNA fragment; c... 42 1.3
25ref|NM_209563.1| Eremothecium gossypii ADR114Cp (ADR114C), mRNA 42 1.3
26gb|AE003434.4| Drosophila melanogaster chromosome X, section 18 ... 42 1.3
27gb|AC122486.4| Mus musculus BAC clone RP24-380B9 from 12, comple... 42 1.3
28dbj|AP006418.1| Lotus japonicus genomic DNA, chromosome 6, clone... 42 1.3
29ref|XM_483800.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.0
30ref|XM_507612.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 5.0
31ref|XM_507344.2| PREDICTED Oryza sativa (japonica cultivar-group... 40 5.0
32ref|NM_196662.1| Oryza sativa (japonica cultivar-group) contains... 40 5.0
33ref|NM_193891.1| Oryza sativa (japonica cultivar-group), predic... 40 5.0
34ref|NM_189456.1| Oryza sativa (japonica cultivar-group), predic... 40 5.0
35ref|NM_189357.1| Oryza sativa (japonica cultivar-group), predic... 40 5.0
36gb|AC087546.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.0
37gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 40 5.0
38gb|AC118285.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.0
39gb|AY641547.1| Halomonas maura nitrate-reductase operon, complet... 40 5.0
40gb|AC104278.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.0
41gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 40 5.0
42gb|CP000080.1| Leishmania major strain Friedlin chromosome 29, c... 40 5.0
43ref|XM_755863.1| Ustilago maydis 521 hypothetical protein (UM048... 40 5.0
44gb|AC121858.3| Mus musculus BAC clone RP24-104B23 from chromosom... 40 5.0
45ref|XM_380438.1| Gibberella zeae PH-1 chromosome 1 hypothetical ... 40 5.0
46ref|XM_858301.1| PREDICTED: Canis familiaris similar to Retinobl... 40 5.0
47ref|XM_535303.2| PREDICTED: Canis familiaris similar to Retinobl... 40 5.0
48ref|XM_506093.1| Yarrowia lipolytica CLIB122, YALI0F31383g predi... 40 5.0
49ref|XM_785070.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 5.0
50emb|BX011524.1|CNS08H20 Single read from an extremity of a full-... 40 5.0
51emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 5.0
52gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome 40 5.0
53dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
54dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
55dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
56dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
57dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
58dbj|AP003238.4| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
59dbj|AP003277.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
60dbj|AP003263.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
61ref|XM_222159.3| PREDICTED: Rattus norvegicus zinc finger, CCHC ... 40 5.0
62gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 5.0
63dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete ge... 40 5.0
64dbj|AP003630.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
65dbj|AP002968.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
66dbj|AP004587.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
67dbj|AK119182.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.0
68dbj|AK106011.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.0
69dbj|AK105946.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.0
70dbj|AK105881.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.0
71dbj|AK099905.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.0
72dbj|AK064971.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.0
73dbj|AK061296.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.0
74dbj|AK059528.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.0
75gb|AY104787.1| Zea mays PCO146752 mRNA sequence 40 5.0
76emb|AL590988.11| Mouse DNA sequence from clone RP23-46C18 on chr... 40 5.0
77gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.0
78emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB1... 40 5.0 
>gb|AY532594.1| Triticum aestivum minichromosomal maintenance factor (MCM2) mRNA,
           complete cds
          Length = 2923

 Score =  533 bits (269), Expect = e-148
 Identities = 311/324 (95%), Gaps = 1/324 (0%)
 Strand = Plus / Plus

                                                                       
Query: 49  cacgcctcctccacaggacccttctcggagcccgcggatggacgactcggagaacaacgc 108
           ||||| |||||||||||| ||| ||| || ||||||||||||||||||||||||||||||
Sbjct: 4   cacgcgtcctccacaggagcctcctccga-cccgcggatggacgactcggagaacaacgc 62

                                                                       
Query: 109 gccgtcgaccccgggctcgccgggtttcagcaccgaccggctgccgcccaacaccaccac 168
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 63  gccgtcgaccccgggctcgccgggcttcagcaccgaccggctgccgcccaacaccaccac 122

                                                                       
Query: 169 cagccgcggcgccaccgacccgtcctcctactcggacgacgacggcgaggcggaggtcga 228
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 123 cagccgcggcgccaccgacccgtcctcctactcggacgacgatggcgaggcggaggtcga 182

                                                                       
Query: 229 ccccaatgtgctccccgaggacgacggcgccaccgttatccgcgacgaggaggaagacga 288
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 ccccaatgtgctccccgaggacgacggcgccaccgttatccgcgacgaggaggaagacga 242

                                                                       
Query: 289 cggggaagacctcttcaacgacgactacctcaatgattaccggagaatggatgagcagga 348
            ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 243 tggggaggacctcttcaacgacgactacctcaatgattaccgaagaatggatgagcagga 302

                                   
Query: 349 tcactatgagtncgttgggttaga 372
           ||| |||||||  |||||||||||
Sbjct: 303 tcagtatgagtcggttgggttaga 326
to top
>gb|AY532593.1| Triticum aestivum minichromosomal maintenance factor (MCM2) gene,
            exons 1 through 18 and complete sequence
          Length = 8809

 Score =  432 bits (218), Expect = e-118
 Identities = 230/234 (98%)
 Strand = Plus / Plus

                                                                        
Query: 88   ggacgactcggagaacaacgcgccgtcgaccccgggctcgccgggtttcagcaccgaccg 147
            ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 2395 ggacgactcggagaacaacgcgccgtcgaccccgggctcgccgggcttcagcaccgaccg 2454

                                                                        
Query: 148  gctgccgcccaacaccaccaccagccgcggcgccaccgacccgtcctcctactcggacga 207
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2455 gctgccgcccaacaccaccaccagccgcggcgccaccgacccgtcctcctactcggacga 2514

                                                                        
Query: 208  cgacggcgaggcggaggtcgaccccaatgtgctccccgaggacgacggcgccaccgttat 267
            ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2515 cgatggcgaggcggaggtcgaccccaatgtgctccccgaggacgacggcgccaccgttat 2574

                                                                  
Query: 268  ccgcgacgaggaggaagacgacggggaagacctcttcaacgacgactacctcaa 321
            ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 2575 ccgcgacgaggaggaagacgatggggaggacctcttcaacgacgactacctcaa 2628



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 76/89 (85%)
 Strand = Plus / Plus

                                                                        
Query: 1    ccacaattccccccttcccgccgaaaccctagcctcatctcgccaccgcacgcctcctcc 60
            |||| |||||||||||||||||||||||||||||||  | | |  || ||||| ||||||
Sbjct: 2194 ccaccattccccccttcccgccgaaaccctagcctcggcgcacagccacacgcgtcctcc 2253

                                         
Query: 61   acaggacccttctcggagcccgcggatgg 89
            |||||| ||| ||| || |||||||||||
Sbjct: 2254 acaggagcctcctccgaccccgcggatgg 2282



 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 44/48 (91%)
 Strand = Plus / Plus

                                                            
Query: 325  ttaccggagaatggatgagcaggatcactatgagtncgttgggttaga 372
            |||||| |||||||||||||||||||| |||||||  |||||||||||
Sbjct: 3388 ttaccgaagaatggatgagcaggatcagtatgagtcggttgggttaga 3435
to top
>dbj|AK121422.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023133N01, full
           insert sequence
          Length = 3214

 Score =  198 bits (100), Expect = 9e-48
 Identities = 121/128 (94%)
 Strand = Plus / Plus

                                                                       
Query: 85  gatggacgactcggagaacaacgcgccgtcgaccccgggctcgccgggtttcagcaccga 144
           |||||| |||||||||||||||||||||||||| ||||| |||||||| |||||||| ||
Sbjct: 83  gatggatgactcggagaacaacgcgccgtcgacgccggggtcgccggggttcagcacaga 142

                                                                       
Query: 145 ccggctgccgcccaacaccaccaccagccgcggcgccaccgacccgtcctcctactcgga 204
           | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 caggctgccgccgaacaccaccaccagccgcggcgccaccgacccgtcctcctactcgga 202

                   
Query: 205 cgacgacg 212
           ||||||||
Sbjct: 203 cgacgacg 210



 Score =  145 bits (73), Expect = 1e-31
 Identities = 139/160 (86%), Gaps = 6/160 (3%)
 Strand = Plus / Plus

                                                                       
Query: 215 gaggcggaggtcgaccccaatgtgctccccgaggacgacggcgccaccgttatccgcgac 274
           |||||||||||||||||||| |||||||||||||||||||||| |  ||    ||||  |
Sbjct: 234 gaggcggaggtcgaccccaacgtgctccccgaggacgacggcgtcgtcg----ccgc--c 287

                                                                       
Query: 275 gaggaggaagacgacggggaagacctcttcaacgacgactacctcaatgattaccggaga 334
           |||||||| || |||||||| ||||||||||||||| |||||||| ||||||||||||| 
Sbjct: 288 gaggaggaggaggacggggaggacctcttcaacgacaactacctcgatgattaccggagg 347

                                                   
Query: 335 atggatgagcaggatcactatgagtncgttgggttagatg 374
           |||||||||||||| || ||||| |  |||||||||||||
Sbjct: 348 atggatgagcaggaccagtatgaatcggttgggttagatg 387
to top
>gb|AC131343.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0057E15, complete sequence
          Length = 149035

 Score =  192 bits (97), Expect = 6e-46
 Identities = 115/121 (95%)
 Strand = Plus / Plus

                                                                         
Query: 92    gactcggagaacaacgcgccgtcgaccccgggctcgccgggtttcagcaccgaccggctg 151
             |||||||||||||||||||||||||| ||||| |||||||| |||||||| ||| |||||
Sbjct: 97266 gactcggagaacaacgcgccgtcgacgccggggtcgccggggttcagcacagacaggctg 97325

                                                                         
Query: 152   ccgcccaacaccaccaccagccgcggcgccaccgacccgtcctcctactcggacgacgac 211
             ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97326 ccgccgaacaccaccaccagccgcggcgccaccgacccgtcctcctactcggacgacgac 97385

              
Query: 212   g 212
             |
Sbjct: 97386 g 97386



 Score = 89.7 bits (45), Expect = 6e-15
 Identities = 91/105 (86%), Gaps = 6/105 (5%)
 Strand = Plus / Plus

                                                                         
Query: 215   gaggcggaggtcgaccccaatgtgctccccgaggacgacggcgccaccgttatccgcgac 274
             |||||||||||||||||||| |||||||||||||||||||||| |  ||    ||||  |
Sbjct: 97410 gaggcggaggtcgaccccaacgtgctccccgaggacgacggcgtcgtcg----ccgc--c 97463

                                                          
Query: 275   gaggaggaagacgacggggaagacctcttcaacgacgactacctc 319
             |||||||| || |||||||| ||||||||||||||| ||||||||
Sbjct: 97464 gaggaggaggaggacggggaggacctcttcaacgacaactacctc 97508



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                  
Query: 322   tgattaccggagaatggatgagcaggatcactatgagtncgttgggttagatg 374
             |||||||||||| |||||||||||||| || ||||| |  |||||||||||||
Sbjct: 98224 tgattaccggaggatggatgagcaggaccagtatgaatcggttgggttagatg 98276
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  192 bits (97), Expect = 6e-46
 Identities = 115/121 (95%)
 Strand = Plus / Plus

                                                                            
Query: 92       gactcggagaacaacgcgccgtcgaccccgggctcgccgggtttcagcaccgaccggctg 151
                |||||||||||||||||||||||||| ||||| |||||||| |||||||| ||| |||||
Sbjct: 16456667 gactcggagaacaacgcgccgtcgacgccggggtcgccggggttcagcacagacaggctg 16456726

                                                                            
Query: 152      ccgcccaacaccaccaccagccgcggcgccaccgacccgtcctcctactcggacgacgac 211
                ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16456727 ccgccgaacaccaccaccagccgcggcgccaccgacccgtcctcctactcggacgacgac 16456786

                 
Query: 212      g 212
                |
Sbjct: 16456787 g 16456787



 Score = 89.7 bits (45), Expect = 6e-15
 Identities = 91/105 (86%), Gaps = 6/105 (5%)
 Strand = Plus / Plus

                                                                            
Query: 215      gaggcggaggtcgaccccaatgtgctccccgaggacgacggcgccaccgttatccgcgac 274
                |||||||||||||||||||| |||||||||||||||||||||| |  ||    ||||  |
Sbjct: 16456811 gaggcggaggtcgaccccaacgtgctccccgaggacgacggcgtcgtcg----ccgc--c 16456864

                                                             
Query: 275      gaggaggaagacgacggggaagacctcttcaacgacgactacctc 319
                |||||||| || |||||||| ||||||||||||||| ||||||||
Sbjct: 16456865 gaggaggaggaggacggggaggacctcttcaacgacaactacctc 16456909



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                     
Query: 322      tgattaccggagaatggatgagcaggatcactatgagtncgttgggttagatg 374
                |||||||||||| |||||||||||||| || ||||| |  |||||||||||||
Sbjct: 16457625 tgattaccggaggatggatgagcaggaccagtatgaatcggttgggttagatg 16457677
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  192 bits (97), Expect = 6e-46
 Identities = 115/121 (95%)
 Strand = Plus / Plus

                                                                            
Query: 92       gactcggagaacaacgcgccgtcgaccccgggctcgccgggtttcagcaccgaccggctg 151
                |||||||||||||||||||||||||| ||||| |||||||| |||||||| ||| |||||
Sbjct: 16547671 gactcggagaacaacgcgccgtcgacgccggggtcgccggggttcagcacagacaggctg 16547730

                                                                            
Query: 152      ccgcccaacaccaccaccagccgcggcgccaccgacccgtcctcctactcggacgacgac 211
                ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16547731 ccgccgaacaccaccaccagccgcggcgccaccgacccgtcctcctactcggacgacgac 16547790

                 
Query: 212      g 212
                |
Sbjct: 16547791 g 16547791



 Score = 89.7 bits (45), Expect = 6e-15
 Identities = 91/105 (86%), Gaps = 6/105 (5%)
 Strand = Plus / Plus

                                                                            
Query: 215      gaggcggaggtcgaccccaatgtgctccccgaggacgacggcgccaccgttatccgcgac 274
                |||||||||||||||||||| |||||||||||||||||||||| |  ||    ||||  |
Sbjct: 16547815 gaggcggaggtcgaccccaacgtgctccccgaggacgacggcgtcgtcg----ccgc--c 16547868

                                                             
Query: 275      gaggaggaagacgacggggaagacctcttcaacgacgactacctc 319
                |||||||| || |||||||| ||||||||||||||| ||||||||
Sbjct: 16547869 gaggaggaggaggacggggaggacctcttcaacgacaactacctc 16547913



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                     
Query: 322      tgattaccggagaatggatgagcaggatcactatgagtncgttgggttagatg 374
                |||||||||||| |||||||||||||| || ||||| |  |||||||||||||
Sbjct: 16548629 tgattaccggaggatggatgagcaggaccagtatgaatcggttgggttagatg 16548681
to top
>ref|XM_468862.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1135

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 203 gacgacgacggcgaggcggagg 224
           ||||||||||||||||||||||
Sbjct: 124 gacgacgacggcgaggcggagg 145
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 203      gacgacgacggcgaggcggagg 224
                ||||||||||||||||||||||
Sbjct: 18389373 gacgacgacggcgaggcggagg 18389352
to top
>gb|AC106887.3| Oryza sativa chromosome 3 BAC OSJNBa0054H04 genomic sequence, complete
              sequence
          Length = 159579

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 203    gacgacgacggcgaggcggagg 224
              ||||||||||||||||||||||
Sbjct: 155804 gacgacgacggcgaggcggagg 155783
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 203      gacgacgacggcgaggcggagg 224
                ||||||||||||||||||||||
Sbjct: 18383414 gacgacgacggcgaggcggagg 18383393
to top
>dbj|AK065720.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013041G12, full
           insert sequence
          Length = 1196

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 203 gacgacgacggcgaggcggagg 224
           ||||||||||||||||||||||
Sbjct: 173 gacgacgacggcgaggcggagg 194
to top
>ref|XM_466933.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1266

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 203 gacgacgacggcgaggcggaggtcgaccc 231
           ||||||||||||||||||| || ||||||
Sbjct: 799 gacgacgacggcgaggcggggggcgaccc 827
to top
>gb|BT015953.1| Drosophila melanogaster SD09647 full insert cDNA
          Length = 2972

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 169  cagccgcggcgccaccgacccgtcctcct 197
            ||||| ||||||||||||| |||||||||
Sbjct: 1752 cagccacggcgccaccgactcgtcctcct 1724
to top
>gb|BT025193.1| Drosophila melanogaster FI01127 full insert cDNA
          Length = 2971

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 169  cagccgcggcgccaccgacccgtcctcct 197
            ||||| ||||||||||||| |||||||||
Sbjct: 1752 cagccacggcgccaccgactcgtcctcct 1724
to top
>gb|AY223810.1| Rhodococcus erythropolis linear plasmid pBD2, complete sequence
          Length = 210205

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 202   ggacgacgacggcgaggcggaggtc 226
             |||||||| ||||||||||||||||
Sbjct: 13636 ggacgacgccggcgaggcggaggtc 13660
to top
>gb|AY861166.1| Cottus gobio microsatellite Cott105 sequence
          Length = 711

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 270 gcgacgaggaggaagacgacggggaagac 298
           ||||||||||||||||||| | |||||||
Sbjct: 297 gcgacgaggaggaagacgaggaggaagac 269
to top
>gb|AC023740.4| Drosophila melanogaster X BAC RP98-27J18 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 163764

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 169   cagccgcggcgccaccgacccgtcctcct 197
             ||||| ||||||||||||| |||||||||
Sbjct: 58418 cagccacggcgccaccgactcgtcctcct 58390
to top
>ref|NM_132004.2| Drosophila melanogaster CG4136-RA (CG4136), mRNA
          Length = 2983

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 169  cagccgcggcgccaccgacccgtcctcct 197
            ||||| ||||||||||||| |||||||||
Sbjct: 1765 cagccacggcgccaccgactcgtcctcct 1737
to top
>gb|AY070708.1| Drosophila melanogaster SD01032 full length cDNA
          Length = 2647

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 169  cagccgcggcgccaccgacccgtcctcct 197
            ||||| ||||||||||||| |||||||||
Sbjct: 1429 cagccacggcgccaccgactcgtcctcct 1401
to top
>gb|AE016817.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome IV,
              complete sequence
          Length = 1466886

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 275    gaggaggaagacgacggggaa 295
              |||||||||||||||||||||
Sbjct: 909354 gaggaggaagacgacggggaa 909334
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 203      gacgacgacggcgaggcggaggtcgaccc 231
                ||||||||||||||||||| || ||||||
Sbjct: 25523607 gacgacgacggcgaggcggggggcgaccc 25523579
to top
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome
          Length = 3052398

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 202     ggacgacgacggcgaggcgga 222
               |||||||||||||||||||||
Sbjct: 2117542 ggacgacgacggcgaggcgga 2117562
to top
>dbj|AP004067.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1581_H09
          Length = 86699

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 203   gacgacgacggcgaggcggaggtcgaccc 231
             ||||||||||||||||||| || ||||||
Sbjct: 15006 gacgacgacggcgaggcggggggcgaccc 14978
to top
>emb|AJ234640.1|HVU234640 Hordeum vulgare genomic DNA fragment; clone MWG0904.rev
          Length = 416

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 160 caccaccaccagccgcggcgccacc 184
           |||||||||||||| ||||||||||
Sbjct: 305 caccaccaccagccacggcgccacc 281
to top
>ref|NM_209563.1| Eremothecium gossypii ADR114Cp (ADR114C), mRNA
          Length = 2085

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 275 gaggaggaagacgacggggaa 295
           |||||||||||||||||||||
Sbjct: 154 gaggaggaagacgacggggaa 174
to top
>gb|AE003434.4| Drosophila melanogaster chromosome X, section 18 of 74 of the complete
              sequence
          Length = 303928

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 169    cagccgcggcgccaccgacccgtcctcct 197
              ||||| ||||||||||||| |||||||||
Sbjct: 287799 cagccacggcgccaccgactcgtcctcct 287771
to top
>gb|AC122486.4| Mus musculus BAC clone RP24-380B9 from 12, complete sequence
          Length = 128253

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 335    atggatgagcaggatcactat 355
              |||||||||||||||||||||
Sbjct: 108319 atggatgagcaggatcactat 108339
to top
>dbj|AP006418.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT23A02, TM0306,
             complete sequence
          Length = 62713

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 13    ccttcccgccgaaaccctagcctca 37
             |||||||| ||||||||||||||||
Sbjct: 47783 ccttcccgtcgaaaccctagcctca 47807
to top
>ref|XM_483800.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1124

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 209 gacggcgaggcggaggtcga 228
           ||||||||||||||||||||
Sbjct: 545 gacggcgaggcggaggtcga 526
to top
>ref|XM_507612.1| PREDICTED Oryza sativa (japonica cultivar-group), P0543D10.14 mRNA
          Length = 1356

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 209 gacggcgaggcggaggtcga 228
           ||||||||||||||||||||
Sbjct: 546 gacggcgaggcggaggtcga 527
to top
>ref|XM_507344.2| PREDICTED Oryza sativa (japonica cultivar-group), P0543D10.14 mRNA
          Length = 1775

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 209 gacggcgaggcggaggtcga 228
           ||||||||||||||||||||
Sbjct: 546 gacggcgaggcggaggtcga 527
to top
>ref|NM_196662.1| Oryza sativa (japonica cultivar-group) contains similarity to
           gypsy-type retrotransposon (OSJNBa0012D19.23), mRNA
          Length = 1998

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 275 gaggaggaagacgacgggga 294
           ||||||||||||||||||||
Sbjct: 868 gaggaggaagacgacgggga 887
to top
>ref|NM_193891.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 960

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 271 cgacgaggaggaagacgacg 290
           ||||||||||||||||||||
Sbjct: 636 cgacgaggaggaagacgacg 655
to top
>ref|NM_189456.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1098

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 202 ggacgacgacggcgaggcgg 221
           ||||||||||||||||||||
Sbjct: 726 ggacgacgacggcgaggcgg 745
to top
>ref|NM_189357.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1632

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 178 cgccaccgacccgtcctcct 197
           ||||||||||||||||||||
Sbjct: 843 cgccaccgacccgtcctcct 824
to top
>gb|AC087546.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0012D19,
              complete sequence
          Length = 153276

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 275    gaggaggaagacgacgggga 294
              ||||||||||||||||||||
Sbjct: 121853 gaggaggaagacgacgggga 121872
to top
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 202    ggacgacgacggcgaggcgg 221
              ||||||||||||||||||||
Sbjct: 234766 ggacgacgacggcgaggcgg 234785
to top
>gb|AC118285.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1206_C08,
              complete sequence
          Length = 115026

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 271    cgacgaggaggaagacgacg 290
              ||||||||||||||||||||
Sbjct: 107836 cgacgaggaggaagacgacg 107817
to top
>gb|AY641547.1| Halomonas maura nitrate-reductase operon, complete sequence
          Length = 8823

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 244  cgaggacgacggcgccaccg 263
            ||||||||||||||||||||
Sbjct: 3486 cgaggacgacggcgccaccg 3505
to top
>gb|AC104278.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1345_B12,
             complete sequence
          Length = 119909

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 271   cgacgaggaggaagacgacg 290
             ||||||||||||||||||||
Sbjct: 22028 cgacgaggaggaagacgacg 22009
to top
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 202    ggacgacgacggcgaggcgg 221
              ||||||||||||||||||||
Sbjct: 917060 ggacgacgacggcgaggcgg 917079
to top
>gb|CP000080.1| Leishmania major strain Friedlin chromosome 29, complete sequence
          Length = 1212674

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 159    acaccaccaccagccgcggc 178
              ||||||||||||||||||||
Sbjct: 653840 acaccaccaccagccgcggc 653821
to top
>ref|XM_755863.1| Ustilago maydis 521 hypothetical protein (UM04809.1) partial mRNA
          Length = 1827

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 271 cgacgaggaggaagacgacggggaagac 298
           |||||| ||||||||||||| |||||||
Sbjct: 864 cgacgacgaggaagacgacgaggaagac 891
to top
>gb|AC121858.3| Mus musculus BAC clone RP24-104B23 from chromosome 8, complete sequence
          Length = 177226

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 54    ctcctccacaggacccttct 73
             ||||||||||||||||||||
Sbjct: 72162 ctcctccacaggacccttct 72181
to top
>ref|XM_380438.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG00262.1)
           partial mRNA
          Length = 1035

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 271 cgacgaggaggaagacgacg 290
           ||||||||||||||||||||
Sbjct: 402 cgacgaggaggaagacgacg 421
to top
>ref|XM_858301.1| PREDICTED: Canis familiaris similar to Retinoblastoma-like protein
           2 (130 kDa retinoblastoma-associated protein) (PRB2)
           (P130) (RBR-2), transcript variant 3 (LOC478127), mRNA
          Length = 2389

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 275 gaggaggaagacgacgggga 294
           ||||||||||||||||||||
Sbjct: 153 gaggaggaagacgacgggga 172
to top
>ref|XM_535303.2| PREDICTED: Canis familiaris similar to Retinoblastoma-like protein
           2 (130 kDa retinoblastoma-associated protein) (PRB2)
           (P130) (RBR-2), transcript variant 1 (LOC478127), mRNA
          Length = 4080

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 275 gaggaggaagacgacgggga 294
           ||||||||||||||||||||
Sbjct: 153 gaggaggaagacgacgggga 172
to top
>ref|XM_506093.1| Yarrowia lipolytica CLIB122, YALI0F31383g predicted mRNA
          Length = 1260

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 275  gaggaggaagacgacggggaagac 298
            |||||||||||||||| |||||||
Sbjct: 1108 gaggaggaagacgacgaggaagac 1131
to top
>ref|XM_785070.1| PREDICTED: Strongylocentrotus purpuratus similar to Hypothetical
            UPF0120 protein DKFZp564C186 homolog (LOC585237), mRNA
          Length = 2835

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 283  agacgacggggaagacctcttcaa 306
            |||||||| |||||||||||||||
Sbjct: 2055 agacgacgaggaagacctcttcaa 2078
to top
>emb|BX011524.1|CNS08H20 Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAA18BG03 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 927

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 271 cgacgaggaggaagacgacggggaagac 298
           ||||||||||| | ||||||||||||||
Sbjct: 795 cgacgaggagggaaacgacggggaagac 768
to top
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 202    ggacgacgacggcgaggcgg 221
              ||||||||||||||||||||
Sbjct: 759458 ggacgacgacggcgaggcgg 759477
to top
>gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome
          Length = 2628784

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 208     cgacggcgaggcggaggtcg 227
               ||||||||||||||||||||
Sbjct: 1456092 cgacggcgaggcggaggtcg 1456111
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 275      gaggaggaagacgacgggga 294
                ||||||||||||||||||||
Sbjct: 15063234 gaggaggaagacgacgggga 15063253
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 209      gacggcgaggcggaggtcga 228
                ||||||||||||||||||||
Sbjct: 28164510 gacggcgaggcggaggtcga 28164529
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 271      cgacgaggaggaagacgacg 290
                ||||||||||||||||||||
Sbjct: 22276608 cgacgaggaggaagacgacg 22276589
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 271      cgacgaggaggaagacgacg 290
                ||||||||||||||||||||
Sbjct: 26869596 cgacgaggaggaagacgacg 26869577
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 202      ggacgacgacggcgaggcgg 221
                ||||||||||||||||||||
Sbjct: 42848790 ggacgacgacggcgaggcgg 42848809



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 178      cgccaccgacccgtcctcct 197
                ||||||||||||||||||||
Sbjct: 42357219 cgccaccgacccgtcctcct 42357238



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 271      cgacgaggaggaagacgacg 290
                ||||||||||||||||||||
Sbjct: 15675773 cgacgaggaggaagacgacg 15675792
to top
>dbj|AP003238.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0401G10
          Length = 160704

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 178    cgccaccgacccgtcctcct 197
              ||||||||||||||||||||
Sbjct: 129176 cgccaccgacccgtcctcct 129195
to top
>dbj|AP003277.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0518C01
          Length = 173555

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 202   ggacgacgacggcgaggcgg 221
             ||||||||||||||||||||
Sbjct: 42524 ggacgacgacggcgaggcgg 42543
to top
>dbj|AP003263.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0483G10
          Length = 190721

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 178   cgccaccgacccgtcctcct 197
             ||||||||||||||||||||
Sbjct: 16557 cgccaccgacccgtcctcct 16576
to top
>ref|XM_222159.3| PREDICTED: Rattus norvegicus zinc finger, CCHC domain containing 8
           (predicted) (Zcchc8_predicted), mRNA
          Length = 2675

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 271 cgacgaggaggaagacgacg 290
           ||||||||||||||||||||
Sbjct: 162 cgacgaggaggaagacgacg 181
to top
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 166     caccagccgcggcgccaccgacccgtcc 193
               ||||||||||| |||||||||| |||||
Sbjct: 2859792 caccagccgcgccgccaccgacgcgtcc 2859819



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 160     caccaccaccagccgcggcg 179
               ||||||||||||||||||||
Sbjct: 1645167 caccaccaccagccgcggcg 1645186
to top
>dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete genome
          Length = 3544776

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 80      ccgcggatggacgactcgga 99
               ||||||||||||||||||||
Sbjct: 2043809 ccgcggatggacgactcgga 2043828
to top
>dbj|AP003630.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0566A10
          Length = 174367

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 271   cgacgaggaggaagacgacg 290
             ||||||||||||||||||||
Sbjct: 55031 cgacgaggaggaagacgacg 55012
to top
>dbj|AP002968.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0416G11
          Length = 138858

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 271    cgacgaggaggaagacgacg 290
              ||||||||||||||||||||
Sbjct: 113670 cgacgaggaggaagacgacg 113689
to top
>dbj|AP004587.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0543D10
          Length = 134866

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 209   gacggcgaggcggaggtcga 228
             ||||||||||||||||||||
Sbjct: 47983 gacggcgaggcggaggtcga 48002
to top
>dbj|AK119182.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-H03, full
           insert sequence
          Length = 1377

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 202 ggacgacgacggcgaggcgg 221
           ||||||||||||||||||||
Sbjct: 776 ggacgacgacggcgaggcgg 795
to top
>dbj|AK106011.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-B02, full
           insert sequence
          Length = 1377

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 202 ggacgacgacggcgaggcgg 221
           ||||||||||||||||||||
Sbjct: 776 ggacgacgacggcgaggcgg 795
to top
>dbj|AK105946.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-C05, full
           insert sequence
          Length = 1367

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 271 cgacgaggaggaagacgacg 290
           ||||||||||||||||||||
Sbjct: 978 cgacgaggaggaagacgacg 997
to top
>dbj|AK105881.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-D02, full
           insert sequence
          Length = 1519

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 202 ggacgacgacggcgaggcgg 221
           ||||||||||||||||||||
Sbjct: 776 ggacgacgacggcgaggcgg 795
to top
>dbj|AK099905.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013115M05, full
           insert sequence
          Length = 1356

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 209 gacggcgaggcggaggtcga 228
           ||||||||||||||||||||
Sbjct: 546 gacggcgaggcggaggtcga 527
to top
>dbj|AK064971.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001B15, full
           insert sequence
          Length = 1775

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 209 gacggcgaggcggaggtcga 228
           ||||||||||||||||||||
Sbjct: 546 gacggcgaggcggaggtcga 527
to top
>dbj|AK061296.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-D11, full
           insert sequence
          Length = 1124

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 209 gacggcgaggcggaggtcga 228
           ||||||||||||||||||||
Sbjct: 545 gacggcgaggcggaggtcga 526
to top
>dbj|AK059528.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-D05, full
           insert sequence
          Length = 1332

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 202 ggacgacgacggcgaggcgg 221
           ||||||||||||||||||||
Sbjct: 776 ggacgacgacggcgaggcgg 795
to top
>gb|AY104787.1| Zea mays PCO146752 mRNA sequence
          Length = 1026

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 205 cgacgacggcgaggcggagg 224
           ||||||||||||||||||||
Sbjct: 139 cgacgacggcgaggcggagg 120
to top
>emb|AL590988.11| Mouse DNA sequence from clone RP23-46C18 on chromosome 8, complete
              sequence
          Length = 183975

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 54     ctcctccacaggacccttct 73
              ||||||||||||||||||||
Sbjct: 181578 ctcctccacaggacccttct 181597
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 275      gaggaggaagacgacgggga 294
                ||||||||||||||||||||
Sbjct: 15071475 gaggaggaagacgacgggga 15071494
to top
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica
          Length = 4003362

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 275     gaggaggaagacgacggggaagac 298
               |||||||||||||||| |||||||
Sbjct: 3903697 gaggaggaagacgacgaggaagac 3903674


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,714,820
Number of Sequences: 3902068
Number of extensions: 2714820
Number of successful extensions: 69734
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 68243
Number of HSP's gapped (non-prelim): 1490
length of query: 374
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 352
effective length of database: 17,147,199,772
effective search space: 6035814319744
effective search space used: 6035814319744
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top