ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl11g12 |
|---|---|
| Clone Library Name | barley_pub |
>LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 107 bits (268), Expect = 6e-24 Identities = 50/72 (69%), Positives = 60/72 (83%) Frame = +1 Query: 76 VGGIVSDLTGGLRGAHLKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISSTNV 255 +GG++ LTG + A LKG+VVLMRKN LD NDFGAT++DG+ E LG+GVTCQLISST V Sbjct: 3 LGGLIDTLTGANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVTCQLISSTAV 62 Query: 256 DHNNGGRGKVGA 291 D +NGGRGKVGA Sbjct: 63 DQDNGGRGKVGA 74
>LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12)| Length = 866 Score = 104 bits (260), Expect = 5e-23 Identities = 50/72 (69%), Positives = 59/72 (81%) Frame = +1 Query: 76 VGGIVSDLTGGLRGAHLKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISSTNV 255 +GGI+ +TG + + LKG+VVLMRKN LD NDFGATV+DG+ E LG+GVTCQLISST V Sbjct: 2 LGGIIDTITGSSKQSRLKGTVVLMRKNVLDLNDFGATVIDGLGEFLGKGVTCQLISSTAV 61 Query: 256 DHNNGGRGKVGA 291 D NNG RGKVGA Sbjct: 62 DPNNGNRGKVGA 73
>LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase L-2)| Length = 870 Score = 103 bits (256), Expect = 1e-22 Identities = 50/71 (70%), Positives = 60/71 (84%) Frame = +1 Query: 76 VGGIVSDLTGGLRGAHLKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISSTNV 255 +GGI+ LTG + A LKGS+VLMRKNALD NDFGATV+DG++E LGRGVTCQL+SS+ V Sbjct: 2 LGGIIGGLTGN-KNARLKGSLVLMRKNALDINDFGATVIDGISEFLGRGVTCQLVSSSLV 60 Query: 256 DHNNGGRGKVG 288 D NNG RG+VG Sbjct: 61 DPNNGNRGRVG 71
>LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygenase) (r9-LOX1)| Length = 863 Score = 66.6 bits (161), Expect = 2e-11 Identities = 34/72 (47%), Positives = 46/72 (63%) Frame = +1 Query: 76 VGGIVSDLTGGLRGAHLKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISSTNV 255 +GG+ LTG G +KG VLM + LD DF A+++D V E+ G +TCQL+S+T Sbjct: 2 LGGLKDKLTGK-NGNKIKGLAVLMSRKLLDPRDFTASLLDNVHEVFGNSITCQLVSATVA 60 Query: 256 DHNNGGRGKVGA 291 D NN GRG VG+ Sbjct: 61 DQNNEGRGIVGS 72
>LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12)| Length = 859 Score = 64.7 bits (156), Expect = 6e-11 Identities = 33/67 (49%), Positives = 44/67 (65%), Gaps = 3/67 (4%) Frame = +1 Query: 97 LTGG---LRGAHLKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISSTNVDHNN 267 LTGG +KG+VVLM+KN LDFNDF A+ +D + E LG +T +L+SS D N Sbjct: 9 LTGGGNETTTKKVKGTVVLMKKNVLDFNDFNASFLDRLHEFLGNKITLRLVSSDVTDSEN 68 Query: 268 GGRGKVG 288 G +GK+G Sbjct: 69 GSKGKLG 75
>LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12)| Length = 860 Score = 61.2 bits (147), Expect = 6e-10 Identities = 33/71 (46%), Positives = 45/71 (63%), Gaps = 5/71 (7%) Frame = +1 Query: 85 IVSDLTGGLRGAH-----LKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISST 249 ++ L GGL G H +KG+VV+M+KNALDF D ++ D + E LG+ V+ QLISS Sbjct: 1 MLGQLVGGLIGGHHDSKKVKGTVVMMKKNALDFTDLAGSLTDKIFEALGQKVSFQLISSV 60 Query: 250 NVDHNNGGRGK 282 D NG +GK Sbjct: 61 QSDPANGLQGK 71
>LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12)| Length = 859 Score = 58.5 bits (140), Expect = 4e-09 Identities = 32/66 (48%), Positives = 45/66 (68%), Gaps = 1/66 (1%) Frame = +1 Query: 76 VGGIVSDLTGGLRGAHLKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLIS-STN 252 +GGIV + G +KG V+LM+KN LDF + GA+V+DG+++LLG+ V+ QLIS S N Sbjct: 3 LGGIVDAILGKDDRPKVKGRVILMKKNVLDFINIGASVVDGISDLLGQKVSIQLISGSVN 62 Query: 253 VDHNNG 270 D G Sbjct: 63 YDGLEG 68
>LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12)| Length = 877 Score = 55.8 bits (133), Expect = 3e-08 Identities = 32/77 (41%), Positives = 48/77 (62%), Gaps = 6/77 (7%) Frame = +1 Query: 76 VGGIVSDLTGGLRGA----HLKGSVVLMRKNALDFNDFGATVMDGVTELLG--RGVTCQL 237 V G LTG + A ++G+ VL++K+ L DF A+++DGV +LG GV +L Sbjct: 3 VQGFFDRLTGRNKEAWKEGRIRGTAVLVKKDVLGLGDFHASLLDGVHNILGHKEGVAFRL 62 Query: 238 ISSTNVDHNNGGRGKVG 288 +S+T D +NGGRGK+G Sbjct: 63 VSATARDPSNGGRGKLG 79
>LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12)| Length = 861 Score = 55.8 bits (133), Expect = 3e-08 Identities = 29/71 (40%), Positives = 43/71 (60%), Gaps = 5/71 (7%) Frame = +1 Query: 85 IVSDLTGGLRGAH-----LKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISST 249 ++ +T GL G H +KG+VV+M KN LDF D ++ + ++LG+ V+ QLISS Sbjct: 1 MIGQITSGLFGGHDDSKKVKGTVVMMNKNVLDFTDLAGSLTGKIFDVLGQKVSFQLISSV 60 Query: 250 NVDHNNGGRGK 282 D NG +GK Sbjct: 61 QGDPTNGLQGK 71
>LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12)| Length = 864 Score = 54.7 bits (130), Expect = 6e-08 Identities = 37/84 (44%), Positives = 48/84 (57%), Gaps = 19/84 (22%) Frame = +1 Query: 94 DLTGGLRGAH-LKGSVVLMRKNALDFN--------------DFGATV----MDGVTELLG 216 ++TG L H ++G+VVLMRKN LDFN D G + +DG+T LG Sbjct: 4 NVTGLLNKGHKIRGTVVLMRKNVLDFNTIVSIGGGNVHGVIDSGINIIGSTLDGLTAFLG 63 Query: 217 RGVTCQLISSTNVDHNNGGRGKVG 288 R V+ QLIS+T D N G+GKVG Sbjct: 64 RSVSLQLISATKSDAN--GKGKVG 85
>LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2)| Length = 865 Score = 51.6 bits (122), Expect = 5e-07 Identities = 38/93 (40%), Positives = 46/93 (49%), Gaps = 19/93 (20%) Frame = +1 Query: 67 MFGVGGIVSDLTGGLRGAH-LKGSVVLMRKNALDFNDFG------------------ATV 189 MF V G+ L G G H +KG+VVLMRKN LDFN + Sbjct: 1 MFSVPGVSGILNRG--GGHKIKGTVVLMRKNVLDFNSVADLTKGNVGGLIGTGLNVVGST 58 Query: 190 MDGVTELLGRGVTCQLISSTNVDHNNGGRGKVG 288 +D +T LGR V QLIS+T N G+GKVG Sbjct: 59 LDNLTAFLGRSVALQLISATKPLAN--GKGKVG 89
>LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12)| Length = 861 Score = 51.6 bits (122), Expect = 5e-07 Identities = 35/80 (43%), Positives = 45/80 (56%), Gaps = 14/80 (17%) Frame = +1 Query: 91 SDLTGGL-RGAHLKGSVVLMRKNALDFN-------------DFGATVMDGVTELLGRGVT 228 S +TG L RG +KG+VVLMRKN LD N D + +D +T LGR V+ Sbjct: 3 SGVTGILNRGHKIKGTVVLMRKNVLDINSLTTVGGVIGQGFDILGSTVDNLTAFLGRSVS 62 Query: 229 CQLISSTNVDHNNGGRGKVG 288 QLIS+T D G+GK+G Sbjct: 63 LQLISATKPDAT--GKGKLG 80
>LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3)| Length = 857 Score = 51.2 bits (121), Expect = 7e-07 Identities = 34/79 (43%), Positives = 44/79 (55%), Gaps = 15/79 (18%) Frame = +1 Query: 97 LTGGL--RGAHLKGSVVLMRKNALDFN-------------DFGATVMDGVTELLGRGVTC 231 + GGL RG +KG+VVLMRKN L N D + +D +T LGR V+ Sbjct: 1 MLGGLLHRGHKIKGTVVLMRKNVLHVNSVTSVGGIIGQGLDLVGSTLDTLTAFLGRPVSL 60 Query: 232 QLISSTNVDHNNGGRGKVG 288 QLIS+T D N G+GK+G Sbjct: 61 QLISATKADAN--GKGKLG 77
>LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1)| Length = 839 Score = 49.7 bits (117), Expect = 2e-06 Identities = 29/58 (50%), Positives = 38/58 (65%) Frame = +1 Query: 115 GAHLKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISSTNVDHNNGGRGKVG 288 G +KG+VVLM KN L+ N G+ V D + LGR V+ QLIS+T D + G+GKVG Sbjct: 5 GHKIKGTVVLMPKNELEVNPDGSAV-DNLNAFLGRSVSLQLISATKADAH--GKGKVG 59
>LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 48.1 bits (113), Expect = 6e-06 Identities = 30/81 (37%), Positives = 39/81 (48%), Gaps = 22/81 (27%) Frame = +1 Query: 112 RGAHLKGSVVLMRKNALDFNDFGAT----------------------VMDGVTELLGRGV 225 RG +KG+VVLM KN DFN+F +T ++DG T + R + Sbjct: 7 RGHKIKGTVVLMTKNVFDFNEFVSTTRGGIVGAAGGLFGAATDIVGGIVDGATAIFSRNI 66 Query: 226 TCQLISSTNVDHNNGGRGKVG 288 QLIS+T D G GKVG Sbjct: 67 AIQLISATKTD--GLGNGKVG 85
>LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12)| Length = 864 Score = 45.4 bits (106), Expect = 4e-05 Identities = 30/81 (37%), Positives = 38/81 (46%), Gaps = 22/81 (27%) Frame = +1 Query: 112 RGAHLKGSVVLMRKNALDFNDFGAT----------------------VMDGVTELLGRGV 225 +G +KG+VVLM KN LDFN + V+D T LGR + Sbjct: 7 KGQKIKGTVVLMPKNVLDFNAITSIGKGGVIDTATGILGQGVSLVGGVIDTATSFLGRNI 66 Query: 226 TCQLISSTNVDHNNGGRGKVG 288 + QLIS+T D G GKVG Sbjct: 67 SMQLISATQTD--GSGNGKVG 85
>LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12)| Length = 866 Score = 42.7 bits (99), Expect = 2e-04 Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 20/78 (25%) Frame = +1 Query: 112 RGAHLKGSVVLMRKNALDFN--------------------DFGATVMDGVTELLGRGVTC 231 RG LKG+V+LM+KN LD N +++D T LGR V Sbjct: 8 RGQKLKGTVILMQKNVLDINALTAAQSPSGIIGGAFGVVGSIAGSIIDTATAFLGRSVRL 67 Query: 232 QLISSTNVDHNNGGRGKV 285 +LIS+T D + G+GKV Sbjct: 68 RLISATVADAS--GKGKV 83
>LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94)| Length = 853 Score = 39.7 bits (91), Expect = 0.002 Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 13/74 (17%) Frame = +1 Query: 106 GLRGAHLKGSVVLMRKNALDFND-------------FGATVMDGVTELLGRGVTCQLISS 246 G +G +KG++V+M+KN LD N F + +D +T ++ QLIS+ Sbjct: 5 GQKGQKIKGTMVVMQKNVLDINSITSVGGIVDQGLGFIGSAVDALT-FAATKISIQLISA 63 Query: 247 TNVDHNNGGRGKVG 288 T D GG+GK+G Sbjct: 64 TKAD---GGKGKIG 74
>PKHA4_HUMAN (Q9H4M7) Pleckstrin homology domain-containing family A member 4| (Phosphoinositol 3-phosphate-binding protein 1) (PEPP-1) Length = 779 Score = 35.4 bits (80), Expect = 0.037 Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 5/73 (6%) Frame = -1 Query: 275 RPPLLWSTLVELMSWQVTPRPRSSVT-----PSMTVAPKSLKSSAFLRMRTTEPLRWAPR 111 R P L++ L S PRPRS+ PS AP + + R+ PL W P+ Sbjct: 228 RSPDLFTPLSRPPSPLSLPRPRSAPARRPPAPSGDTAPPARPHTPLSRIDVRPPLDWGPQ 287 Query: 110 RPPVRSLTMPPTP 72 R ++L+ PPTP Sbjct: 288 R---QTLSRPPTP 297
>UL14_EHV1V (P84404) Hypothetical gene 48 protein| Length = 317 Score = 30.8 bits (68), Expect = 0.92 Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Frame = -3 Query: 186 GGAEVVEVERVLAHEDDGAL-EVGAPEAPRQVAHDAADAKHLRSISGECGTLAKLARCGA 10 GG EV + + L HED+ L EAPR AAD RS + ARCGA Sbjct: 132 GGGEVGDPQEWLGHEDEALLMRWMLEEAPRVSTRIAADPHSPRSTCPAPRKAPEDARCGA 191
>UL14_EHV1B (P28949) Hypothetical gene 48 protein| Length = 317 Score = 30.8 bits (68), Expect = 0.92 Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Frame = -3 Query: 186 GGAEVVEVERVLAHEDDGAL-EVGAPEAPRQVAHDAADAKHLRSISGECGTLAKLARCGA 10 GG EV + + L HED+ L EAPR AAD RS + ARCGA Sbjct: 132 GGGEVGDPQEWLGHEDEALLMRWMLEEAPRVSTRIAADPHSPRSTCPAPRKAPEDARCGA 191
>YAI7_SCHPO (Q09894) Hypothetical protein C24B11.07c in chromosome I| Length = 561 Score = 30.4 bits (67), Expect = 1.2 Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 1/67 (1%) Frame = -1 Query: 293 SAPTFPRPPLLWSTLVELMSWQVTPRPRSSVTPSMTVAPKSLKSSAFLRMRTTEPLRWAP 114 SAP+ + + + ++++S RS +PS+ +SLKS RT +P R+AP Sbjct: 383 SAPSLSKGRAMTADNMDMLSLTTRRSRRSLYSPSLMQMQQSLKSDYEGLGRTFDP-RFAP 441 Query: 113 R-RPPVR 96 R PPVR Sbjct: 442 RGSPPVR 448
>MEGF9_MOUSE (Q8BH27) Multiple epidermal growth factor-like domains 9 precursor| (EGF-like domain-containing protein 5) (Multiple EGF-like domain protein 5) Length = 600 Score = 30.4 bits (67), Expect = 1.2 Identities = 20/64 (31%), Positives = 29/64 (45%) Frame = -1 Query: 293 SAPTFPRPPLLWSTLVELMSWQVTPRPRSSVTPSMTVAPKSLKSSAFLRMRTTEPLRWAP 114 S P+ P P L ST+ + + V ++S TP A +SS + T P+ AP Sbjct: 134 SPPSRPAPTTLASTVGQPPTTSVVTTAQASSTPGTPTAESPDRSSNSSGVPPTAPVTEAP 193 Query: 113 RRPP 102 PP Sbjct: 194 TSPP 197
>USH1C_MOUSE (Q9ES64) Harmonin (Usher syndrome type-1C protein homolog) (PDZ| domain-containing protein) Length = 910 Score = 30.4 bits (67), Expect = 1.2 Identities = 19/54 (35%), Positives = 26/54 (48%) Frame = -1 Query: 227 VTPRPRSSVTPSMTVAPKSLKSSAFLRMRTTEPLRWAPRRPPVRSLTMPPTPNI 66 V P P S +PS AP L SS + ++ W R PP + +PP P+I Sbjct: 563 VMPHPPSVNSPSKVPAPPVLPSSGHVSSSSSP---WVQRTPP--PIPIPPPPSI 611
>MUC2_HUMAN (Q02817) Mucin-2 precursor (Intestinal mucin 2)| Length = 5179 Score = 30.0 bits (66), Expect = 1.6 Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 2/72 (2%) Frame = -1 Query: 284 TFPRPPLLWSTLVELMSWQVTPRPRSSVT--PSMTVAPKSLKSSAFLRMRTTEPLRWAPR 111 T P PP M+ +TP P S+ T P+ T +P + ++ T P P Sbjct: 1498 TTPSPP---------MTTPITP-PASTTTLPPTTTPSPPTTTTTTPPPTTTPSPPTTTPI 1547 Query: 110 RPPVRSLTMPPT 75 PP + T+PPT Sbjct: 1548 TPPTSTTTLPPT 1559 Score = 29.6 bits (65), Expect = 2.0 Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 4/74 (5%) Frame = -1 Query: 284 TFPRPPLLWSTLVELMSWQVTPRPRSSVT----PSMTVAPKSLKSSAFLRMRTTEPLRWA 117 T P PP + +T + TP P ++ T P+ T +P + TT P Sbjct: 1584 TTPSPPTITTTTPPPTT---TPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTT 1640 Query: 116 PRRPPVRSLTMPPT 75 P PP + T PPT Sbjct: 1641 PSPPPTTTTTPPPT 1654 Score = 29.3 bits (64), Expect = 2.7 Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 2/72 (2%) Frame = -1 Query: 284 TFPRPPLLWSTLVELMSWQVTPRPRSSVT--PSMTVAPKSLKSSAFLRMRTTEPLRWAPR 111 T P PP+ +T + TP P ++ P+ T +P + ++ T P P Sbjct: 1452 TTPSPPISTTTTPPPTT---TPSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPMTTPI 1508 Query: 110 RPPVRSLTMPPT 75 PP + T+PPT Sbjct: 1509 TPPASTTTLPPT 1520
>IWS1_XENTR (Q505H7) IWS1-like protein| Length = 909 Score = 29.6 bits (65), Expect = 2.0 Identities = 23/53 (43%), Positives = 28/53 (52%), Gaps = 6/53 (11%) Frame = -3 Query: 189 DGGAEVVEVERVLAHEDDG-----ALEVGAPEAPRQVAH-DAADAKHLRSISG 49 DGGA V+ ER A +D+G E G+PE + H D D KH RS SG Sbjct: 15 DGGATPVQDERDSASDDEGNEREQRSEPGSPERQSEDEHSDIEDNKH-RSDSG 66
>NPAS3_HUMAN (Q8IXF0) Neuronal PAS domain protein 3 (Neuronal PAS3) (Member of| PAS protein 6) (MOP6) Length = 933 Score = 29.6 bits (65), Expect = 2.0 Identities = 12/30 (40%), Positives = 19/30 (63%) Frame = -1 Query: 224 TPRPRSSVTPSMTVAPKSLKSSAFLRMRTT 135 TP P S +PS+ +L+ S F+RM++T Sbjct: 241 TPEPVESTSPSLLTTDNTLERSFFIRMKST 270
>TRPM2_HUMAN (O94759) Transient receptor potential cation channel subfamily M| member 2 (EC 3.6.1.13) (Long transient receptor potential channel 2) (LTrpC2) (LTrpC-2) (Transient receptor potential channel 7) (TrpC7) (Estrogen-responsive element-associated Length = 1503 Score = 29.6 bits (65), Expect = 2.0 Identities = 16/36 (44%), Positives = 22/36 (61%) Frame = +1 Query: 142 LMRKNALDFNDFGATVMDGVTELLGRGVTCQLISST 249 LM+K AL F+DF + G L G+TC+LI +T Sbjct: 856 LMKKAALYFSDFWNKLDVGAILLFVAGLTCRLIPAT 891
>EXTN_SORBI (P24152) Extensin precursor (Proline-rich glycoprotein)| Length = 283 Score = 29.3 bits (64), Expect = 2.7 Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 1/76 (1%) Frame = -1 Query: 287 PTFPRP-PLLWSTLVELMSWQVTPRPRSSVTPSMTVAPKSLKSSAFLRMRTTEPLRWAPR 111 P P+P P ++ + S P P++S P+ T +PK T+P + Sbjct: 84 PATPKPTPPTYTPSPKPKSPVYPPPPKASTPPTYTPSPKP---------PATKPPTYPTP 134 Query: 110 RPPVRSLTMPPTPNIF 63 +PP T PPTP ++ Sbjct: 135 KPPA---TKPPTPPVY 147
>YDC9_SCHPO (Q10172) Hypothetical protein C25G10.09c in chromosome I| Length = 1794 Score = 29.3 bits (64), Expect = 2.7 Identities = 22/74 (29%), Positives = 30/74 (40%) Frame = -1 Query: 290 APTFPRPPLLWSTLVELMSWQVTPRPRSSVTPSMTVAPKSLKSSAFLRMRTTEPLRWAPR 111 AP PP + + V M V +P SSV P+ T +L S P AP+ Sbjct: 1480 APVSQLPPAVPNVPVPSMIPSVAQQPPSSVAPA-TAPSSTLPPSQSSFAHVPSPAPPAPQ 1538 Query: 110 RPPVRSLTMPPTPN 69 P +L+ P N Sbjct: 1539 HPSAAALSSAPADN 1552
>PYRH_DEIRA (Q9RU81) Uridylate kinase (EC 2.7.4.-) (UK) (Uridine monophosphate| kinase) (UMP kinase) Length = 245 Score = 28.9 bits (63), Expect = 3.5 Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 4/44 (9%) Frame = +1 Query: 46 LPRDRAKMFGVGG----IVSDLTGGLRGAHLKGSVVLMRKNALD 165 L + R +FG G +D T LR + VVLM KNA+D Sbjct: 127 LEKGRVVIFGGGNGAPFFTTDTTSTLRALEIGADVVLMAKNAVD 170
>IWS1A_XENLA (Q6DE96) IWS1-like protein A| Length = 836 Score = 28.9 bits (63), Expect = 3.5 Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 4/45 (8%) Frame = -3 Query: 189 DGGAEVVEVERVLAHEDDG---ALEVGAPEAPRQVAH-DAADAKH 67 DGGA V+ ER A +D+G E G+PE + H D D KH Sbjct: 13 DGGATPVQDERDSASDDEGNEQRSEPGSPEHQSEDEHSDVEDHKH 57
>Y091_NPVOP (O10341) Hypothetical 29.3 kDa protein (ORF92)| Length = 279 Score = 28.9 bits (63), Expect = 3.5 Identities = 19/51 (37%), Positives = 20/51 (39%) Frame = -1 Query: 224 TPRPRSSVTPSMTVAPKSLKSSAFLRMRTTEPLRWAPRRPPVRSLTMPPTP 72 TP P S TPS T P S T P P P S T PP+P Sbjct: 136 TPSPTPSPTPSPTPTPSPTPSPTPTPSPTPSP---TPTPSPTPSPTPPPSP 183 Score = 28.1 bits (61), Expect = 6.0 Identities = 24/73 (32%), Positives = 25/73 (34%) Frame = -1 Query: 287 PTFPRPPLLWSTLVELMSWQVTPRPRSSVTPSMTVAPKSLKSSAFLRMRTTEPLRWAPRR 108 P P TL S TP P S TPS T P S T P P Sbjct: 75 PALSPTPTPSPTLSPTPSPTPTPSPTPSPTPSPTPTPSPTPSPTPTPSPTPSPTP-TPSP 133 Query: 107 PPVRSLTMPPTPN 69 P S T PTP+ Sbjct: 134 TPTPSPTPSPTPS 146
>CSKI1_HUMAN (Q8WXD9) Caskin-1 (CASK-interacting protein 1)| Length = 1431 Score = 28.9 bits (63), Expect = 3.5 Identities = 23/71 (32%), Positives = 30/71 (42%), Gaps = 1/71 (1%) Frame = -1 Query: 287 PTFPRPPLLWSTLVELMSWQVTPRPRSSVTPSMTVAPKSLKSSAFLRMRTTEPL-RWAPR 111 PT + PL E+ TP P S P APK +K+ A L + P +P Sbjct: 1245 PTSKKVPLPGPGSPEVKRAHGTPPPVSPKPPPPPTAPKPVKAVAGLPSGSAGPSPAPSPA 1304 Query: 110 RPPVRSLTMPP 78 R P +L PP Sbjct: 1305 RQPPAALAKPP 1315
>MCM3A_MOUSE (Q9WUU9) 80 kda MCM3-associated protein (GANP protein)| Length = 1971 Score = 28.5 bits (62), Expect = 4.6 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = -1 Query: 221 PRPRSSVTPSMTVAPKSLKSSAFLRMRTTEPLRWAPRRPPVRS 93 P P SS TP++ V P + ++ L +T+P P+ PV S Sbjct: 1026 PPPASSATPALHVQPLAPAAAPSLLQASTQPEVLLPKPAPVYS 1068
>NPAS3_MOUSE (Q9QZQ0) Neuronal PAS domain protein 3 (Neuronal PAS3) (Member of| PAS protein 6) (MOP6) Length = 925 Score = 28.5 bits (62), Expect = 4.6 Identities = 11/30 (36%), Positives = 19/30 (63%) Frame = -1 Query: 224 TPRPRSSVTPSMTVAPKSLKSSAFLRMRTT 135 TP P + +PS+ +L+ S F+RM++T Sbjct: 246 TPEPVETTSPSLLTTDNTLERSFFIRMKST 275
>GLTB_MAIZE (P23225) Ferredoxin-dependent glutamate synthase, chloroplast| precursor (EC 1.4.7.1) (Fd-GOGAT) Length = 1616 Score = 28.5 bits (62), Expect = 4.6 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = -3 Query: 117 APEAPRQVAHDAADAKHLRSISGECG 40 AP AP++ AAD H+ S G CG Sbjct: 74 APPAPQKPTQQAADLNHILSERGACG 99
>HUNB_DROIK (O46242) Protein hunchback (Fragments)| Length = 193 Score = 28.5 bits (62), Expect = 4.6 Identities = 17/68 (25%), Positives = 34/68 (50%) Frame = -1 Query: 275 RPPLLWSTLVELMSWQVTPRPRSSVTPSMTVAPKSLKSSAFLRMRTTEPLRWAPRRPPVR 96 RPP L + + +M + P P ++ T + T A S ++A + +++ + L+ P Sbjct: 101 RPPGLPNPMQTIMPANMRPSPTATTTATTTAAAASTTTAATVALQSNDKLQ---ALTPPM 157 Query: 95 SLTMPPTP 72 +T P +P Sbjct: 158 DVTPPKSP 165
>PCD15_MOUSE (Q99PJ1) Protocadherin-15 precursor| Length = 1943 Score = 28.1 bits (61), Expect = 6.0 Identities = 23/74 (31%), Positives = 33/74 (44%) Frame = -1 Query: 287 PTFPRPPLLWSTLVELMSWQVTPRPRSSVTPSMTVAPKSLKSSAFLRMRTTEPLRWAPRR 108 P PRPP+ ++T +S P P VT S+ P S ++ L + L PR Sbjct: 1754 PPLPRPPIAFTTFPLPLS-PPNPPPPQLVTFSL---PISTPPTSSLPLPPPLSLPPPPRP 1809 Query: 107 PPVRSLTMPPTPNI 66 P R PP+ +I Sbjct: 1810 PAPRLFPQPPSTSI 1823
>CI079_HUMAN (Q6ZUB1) Protein C9orf79| Length = 1445 Score = 28.1 bits (61), Expect = 6.0 Identities = 15/61 (24%), Positives = 27/61 (44%), Gaps = 3/61 (4%) Frame = -1 Query: 245 ELMSWQVTPRPR-SSVTPSMTVAPKSLKSSAFLRMRTTEPLRWAPRRPPVRS--LTMPPT 75 E + W + RP+ V PS+ +++ S + P W+P+ P+ +T P Sbjct: 565 EYLEWPLKKRPKWKRVLPSLLKKSQAVLSQPTAHLPQERPASWSPKSAPILPGVVTSPEL 624 Query: 74 P 72 P Sbjct: 625 P 625
>POLR_KYMVJ (P36304) RNA replicase polyprotein (EC 2.7.7.48)| Length = 1874 Score = 27.7 bits (60), Expect = 7.8 Identities = 26/78 (33%), Positives = 30/78 (38%), Gaps = 2/78 (2%) Frame = -1 Query: 293 SAPTFPRPPLLWSTLVELMSWQVTPR-PRSSVTPSMTVAPKSLKSSAFLRMRTTEPLRWA 117 SA P PLL EL P P S + PKS S P A Sbjct: 647 SAQPTPGEPLLAPPTTELKPESSNPNNPNPSSSAGSNPPPKSSSSD-------NPP---A 696 Query: 116 PRRP-PVRSLTMPPTPNI 66 P +P P S T PP+PN+ Sbjct: 697 PNKPTPTSSSTTPPSPNL 714 Score = 27.7 bits (60), Expect = 7.8 Identities = 22/79 (27%), Positives = 29/79 (36%), Gaps = 4/79 (5%) Frame = -1 Query: 293 SAPTFPRPPLLWSTLVELMSWQVTPRPRSSVTPS--MTVAPKSLKSSAFLRMRTTEPLRW 120 S+P FP PP L + L T P + TP + P + P Sbjct: 620 SSPLFPPPPPLPPSQPPLSQGPATQAPSAQPTPGEPLLAPPTTELKPESSNPNNPNPSSS 679 Query: 119 APRRPPVRSLTM--PPTPN 69 A PP +S + PP PN Sbjct: 680 AGSNPPPKSSSSDNPPAPN 698
>PRG4_HUMAN (Q92954) Proteoglycan-4 precursor (Lubricin) (Megakaryocyte| stimulating factor) (Superficial zone proteoglycan) [Contains: Proteoglycan-4 C-terminal part] Length = 1404 Score = 27.7 bits (60), Expect = 7.8 Identities = 25/79 (31%), Positives = 34/79 (43%), Gaps = 5/79 (6%) Frame = -1 Query: 293 SAPTFPRPPLLWSTLVELMSWQVTPRPRSSVTPSMTV---APKSLKSSAFLRMRTTEPLR 123 SAPT P+ P +T + P P ++ P+ T AP + K A T P + Sbjct: 388 SAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPA-----PTTPKK 442 Query: 122 WAPRRPPVRSLTMP--PTP 72 AP P + T P PTP Sbjct: 443 PAPTTPKEPAPTTPKEPTP 461
>TBX10_MOUSE (Q810F8) T-box transcription factor TBX10 (T-box protein 10)| Length = 385 Score = 27.7 bits (60), Expect = 7.8 Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 2/59 (3%) Frame = -1 Query: 236 SWQVTPRPRSSV--TPSMTVAPKSLKSSAFLRMRTTEPLRWAPRRPPVRSLTMPPTPNI 66 SW VTPRP S+ +++P LK SA T++ + R P + P P++ Sbjct: 257 SWPVTPRPLLSIPARSRSSLSPCLLKGSAEREKDTSKASASSSRTPTQPHNQLLPAPDV 315 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 32,147,296 Number of Sequences: 219361 Number of extensions: 495296 Number of successful extensions: 2490 Number of sequences better than 10.0: 43 Number of HSP's better than 10.0 without gapping: 2380 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2471 length of database: 80,573,946 effective HSP length: 73 effective length of database: 64,560,593 effective search space used: 1549454232 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
